The dataset is currently empty. Upload or create new data files. Then, you will be able to explore them in the Dataset Viewer.

YAML Metadata Warning:empty or missing yaml metadata in repo card

Check out the documentation for more information.

BioNLP-Clinical-Rs-Raw

This dataset contains raw clinical text data before processing.

Dataset Description

BioNLP-Clinical-Rs-Raw is the source data used to create the BioNLP-Clinical-Rs dataset, adopted from the original MIMIC-III dataset.

Data Format

Each entry contains:

  • text: Raw clinical note text
  • entities: Extracted medical entities
  • source: Original data source reference

Processing Pipeline

Data is processed through our clinical NLP pipeline which utilizes:

  • PubMedBERT for text understanding
  • UMLS concept mapping

Related Resources

  • BioNLP-Clinical-Rs (processed version)
  • Clinical NER benchmark datasets

Citation

Please cite this dataset as: Johnson, A., Pollard, T., & Mark, R. (2016). MIMIC-III Clinical Database (version 1.4). PhysioNet. https://doi.org/10.13026/C2XW26

Downloads last month
7