Operation Prometheus - SE Trajectories
Collection
GitHub PR trajectories extracted by operation-prometheus for SE model training. • 1 item • Updated
before_context stringlengths 78 1.82k | domain stringclasses 19
values | id stringlengths 18 32 | issue_context stringlengths 45 9.79k | language stringclasses 4
values | outcome stringclasses 1
value | patch stringlengths 2.59k 98.2k | pr_number int64 1 142 | quality_score float64 0.58 0.95 | repo stringlengths 10 31 | review_signals listlengths 1 8 ⌀ | source_license stringclasses 3
values | source_urls listlengths 1 8 | task_type stringclasses 5
values | training_use stringclasses 5
values | validation listlengths 1 4 | license stringclasses 1
value |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
PR title: feat(modulators): implement dynamic neuromodulator gain curves
Changed files (20): .github/workflows/qodana_code_quality.yml, .gitignore, Cargo.lock, Cargo.toml, benches/allocations.rs, benches/encoders.rs, qodana.yaml, src/encoder.rs, src/encoders/delta.rs, src/encoders/derivative.rs, src/encoders/latency.rs... | snn | Limen-Neural-axon-encoder-37 | Issue #26: feat(modulators): Implement dynamic neuromodulator gain curves
## Overview
Extend `modulators.rs` to support real-time dynamic modulation of encoding thresholds, sensitivity, and firing rates based on dopamine/acetylcholine level streams.
## Details
- Refactor `modulators.rs` to support dynamic gain adju... | Rust | merged | # Truncated unified diff for training (full raw under datasets/raw/; 115359 bytes, 20 files)
# added: .github/workflows/qodana_code_quality.yml (+40/-0)
# modified: .gitignore (+32/-7)
# modified: Cargo.lock (+110/-66)
# modified: Cargo.toml (+3/-4)
# modified: benches/allocations.rs (+4/-4)
# modified: benches/encoder... | 37 | 0.95 | Limen-Neural/axon-encoder | [
{
"author": "gemini-code-assist[bot]",
"comment": "## Code Review\n\nThis pull request introduces neuromodulation capabilities across various encoders (DeltaEncoder, PopulationEncoder, PredictiveEncoder, RateEncoder, and TemporalEncoder) by adding support for dynamic gain curves that scale threshold, sensit... | MIT OR Apache-2.0 | [
"https://github.com/Limen-Neural/axon-encoder/pull/37",
"https://github.com/Limen-Neural/axon-encoder/issues/26"
] | feature | review-to-patch | [
{
"detail": "* 'cargo test --locked'\n* 'cargo test --features serde --locked'\n* 'cargo clippy --all-features -- -D warnings'\n* 'cargo test --package axon-encoder --lib -- rng::tests'\n* 'cargo test --message-format=json-diagnostic-rendered-ansi --color=always --no-run --package axon-encoder --lib --profile t... | null |
PR title: Fix Codacy integration and standardize encoders
Changed files (27): .codacy.yml, .github/workflows/ci.yml, .github/workflows/coverage.yml, .gitignore, Cargo.lock, Cargo.toml, README.md, examples/ndarray_encoding.rs, examples/phase_encoding.rs, src/encoder.rs, src/encoders/delta.rs, src/encoders/derivative.rs,... | api | Limen-Neural-axon-encoder-41 | - **New Features**
- Added a Derivative-based encoder with per-channel excitatory/inhibitory spike emission and configurable thresholds.
- Expanded optional Serde support for multiple encoders and related configuration/state, including stricter validation on decode.
- **Bug Fixes**
- Improved spike channel indexi... | Rust | merged | diff --git a/.codacy.yml b/.codacy.yml
new file mode 100644
index 00000000..e8871a54
--- /dev/null
+++ b/.codacy.yml
@@ -0,0 +1,6 @@
+---
+exclude_paths:
+ - "target/**"
+ - "benches/**"
+ - "examples/**"
+ - "tests/**"
diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml
index 86acfaa3..3aacab70 100644... | 41 | 0.95 | Limen-Neural/axon-encoder | [
{
"author": "gemini-code-assist[bot]",
"comment": "## Code Review\n\nThis pull request refactors the codebase by moving the `DerivativeEncoder` into the `encoders` module, implementing the `Encoder` trait for it, and adding unit tests. It also introduces `serde` serialization and deserialization support for... | MIT OR Apache-2.0 | [
"https://github.com/Limen-Neural/axon-encoder/pull/41"
] | bugfix | review-to-patch | [
{
"detail": "codecov/patch=success, Code Coverage=success, Validate, Test & Doc=success",
"result": "pass",
"type": "ci"
},
{
"detail": "combined_status=success",
"result": "pass",
"type": "ci"
},
{
"detail": "review_apps: Codacy Static Code Analysis=success, Kilo Code Review=suc... | null |
"PR title: sec(rng): replace insecure xorshift PRNG with rand 0.10.2\nChanged files (9): .gitignore,(...TRUNCATED) | security | Limen-Neural-axon-encoder-50 | "Replaces the custom global `xorshift64*` PRNG (`AtomicU64` + relaxed ordering) in\n`src/rng.rs` wit(...TRUNCATED) | Rust | merged | "diff --git a/.gitignore b/.gitignore\nindex 5d35b2cb..86dff9fd 100644\n--- a/.gitignore\n+++ b/.git(...TRUNCATED) | 50 | 0.95 | Limen-Neural/axon-encoder | [{"author":"gemini-code-assist[bot]","comment":"## Code Review\n\nThis pull request replaces a custo(...TRUNCATED) | MIT OR Apache-2.0 | [
"https://github.com/Limen-Neural/axon-encoder/pull/50"
] | security | repair | [{"detail":"Canonical checklist: **`REVIEW.md`**. Below is what we ran and **what a pass means**.\n\(...TRUNCATED) | null |
"PR title: feat: temporary corpus-ipc decoupling (issues #10, #11, #12, #14)\nChanged files (12): CH(...TRUNCATED) | api | Limen-Neural-brainstem-daemon-24 | "**Temporary decoupling of `corpus-ipc` + `zmq`** so the core library can reach high code quality fi(...TRUNCATED) | Rust | merged | "diff --git a/CHANGELOG.md b/CHANGELOG.md\nindex 17e07e2..24c4bdf 100644\n--- a/CHANGELOG.md\n+++ b/(...TRUNCATED) | 24 | 0.95 | Limen-Neural/brainstem-daemon | [{"author":"gemini-code-assist[bot]","comment":"## Code Review\n\nThis pull request decouples the co(...TRUNCATED) | MIT OR Apache-2.0 | ["https://github.com/Limen-Neural/brainstem-daemon/pull/24","https://github.com/Limen-Neural/brainst(...TRUNCATED) | refactor | review-to-patch | [{"detail":"- `cargo fmt -- --check`\n- `cargo clippy --all-targets --all-features -- -D warnings`\n(...TRUNCATED) | null |
"PR title: Fallible BrainstemDaemon construction with neuron-count validation\nChanged files (3): .g(...TRUNCATED) | snn | Limen-Neural-brainstem-daemon-25 | "- Prevent daemon construction from aborting the process when user-provided config has too many neur(...TRUNCATED) | Rust | merged | "diff --git a/.gitignore b/.gitignore\nindex 3499706..1656ae2 100644\n--- a/.gitignore\n+++ b/.gitig(...TRUNCATED) | 25 | 0.95 | Limen-Neural/brainstem-daemon | [{"author":"gemini-code-assist[bot]","comment":"## Code Review\n\nThis pull request introduces falli(...TRUNCATED) | MIT OR Apache-2.0 | [
"https://github.com/Limen-Neural/brainstem-daemon/pull/25"
] | bugfix | repair | [{"detail":"- Ran `cargo test` and all unit tests passed (`13 passed; 0 failed`).\n- Ran `cargo clip(...TRUNCATED) | null |
"PR title: Migrate daemon to corpus-ipc and neuromod v0.4.0\nChanged files (3): Cargo.toml, README.m(...TRUNCATED) | snn | Limen-Neural-brainstem-daemon-3 | "- switch daemon dependencies from legacy placeholders to `neuromod = 0.4.0` and `corpus-ipc` (with (...TRUNCATED) | Rust | merged | "diff --git a/Cargo.toml b/Cargo.toml\nindex 63da95a..595e4d1 100644\n--- a/Cargo.toml\n+++ b/Cargo.(...TRUNCATED) | 3 | 0.85 | Limen-Neural/brainstem-daemon | [{"author":"chatgpt-codex-connector[bot]","comment":"**<sub><sub> | MIT OR Apache-2.0 | [
"https://github.com/Limen-Neural/brainstem-daemon/pull/3"
] | feature | feature | [{"detail":"- `cargo check --all-targets` in isolated copy (`/tmp/brainstem-daemon-check`) to avoid (...TRUNCATED) | null |
"PR title: feat: resolve open issues #4, #5, #6, #7\nChanged files (14): .codacy.yml, .github/workfl(...TRUNCATED) | infra | Limen-Neural-brainstem-daemon-8 | "Issue #4: Define brainstem-daemon role in runtime/deployment boundary matrix\n\n## Context\n\nThis (...TRUNCATED) | Rust | merged | "# Truncated unified diff for training (full raw under datasets/raw/; 120278 bytes, 14 files)\n# add(...TRUNCATED) | 8 | 0.95 | Limen-Neural/brainstem-daemon | [{"author":"gemini-code-assist[bot]","comment":"## Code Review\n\nThis pull request refactors the `s(...TRUNCATED) | MIT OR Apache-2.0 | ["https://github.com/Limen-Neural/brainstem-daemon/pull/8","https://github.com/Limen-Neural/brainste(...TRUNCATED) | refactor | feature | [{"detail":"validate=success","result":"pass","type":"ci"},{"detail":"combined_status=success","resu(...TRUNCATED) | null |
"PR title: refactor: domain-agnostic neuromodulator API and CI workflow\nChanged files (25): .github(...TRUNCATED) | ml-infra | Limen-Neural-neuromod-15 | "Issue #13: Remove Domain-Specific Mining/HFT Logic from Core SNN Primitive Library\n\n## Context\n\(...TRUNCATED) | Rust | merged | "# Truncated unified diff for training (full raw under datasets/raw/; 196167 bytes, 25 files)\n# add(...TRUNCATED) | 15 | 0.95 | Limen-Neural/neuromod | [{"author":"gemini-code-assist[bot]","comment":"## Code Review\n\nThis pull request refactors the ne(...TRUNCATED) | MIT OR Apache-2.0 | ["https://github.com/Limen-Neural/neuromod/pull/15","https://github.com/Limen-Neural/neuromod/issues(...TRUNCATED) | refactor | review-to-patch | [{"detail":"- [x] `cargo fmt --check`\n- [x] `cargo clippy --all-targets --all-features -- -D warnin(...TRUNCATED) | null |
"PR title: SNN Core: Mining & HFT Purge\nChanged files (9): Cargo.toml, examples/basic.rs, examples/(...TRUNCATED) | snn | Limen-Neural-neuromod-2 | "Refactoring the engine into a pure neuromorphic research library. This strips all blockchain/HFT lo(...TRUNCATED) | Rust | merged | "diff --git a/Cargo.toml b/Cargo.toml\nindex 7dbeaf1..ddaa532 100644\n--- a/Cargo.toml\n+++ b/Cargo.(...TRUNCATED) | 2 | 0.85 | Limen-Neural/neuromod | [{"author":"rmems","comment":"It needs to be remove"},{"author":"rmems","comment":"@copilot apply ch(...TRUNCATED) | MIT OR Apache-2.0 | [
"https://github.com/Limen-Neural/neuromod/pull/2"
] | refactor | review-to-patch | [
{
"detail": "combined_status=pending",
"result": "fail",
"type": "ci"
}
] | null |
"PR title: feat: add Lapicque, Hodgkin-Huxley, FitzHugh-Nagumo, and Hebbian neuron models\nChanged f(...TRUNCATED) | snn | Limen-Neural-neuromod-5 | "Implements the four foundational neuroscience models requested in issue #3, honoring the scientists(...TRUNCATED) | Rust | merged | "diff --git a/README.md b/README.md\nindex 246baaa..382a133 100644\n--- a/README.md\n+++ b/README.md(...TRUNCATED) | 5 | 0.95 | Limen-Neural/neuromod | [{"author":"rmems","comment":"@copilot apply changes based on [this feedback](https://github.com/Spi(...TRUNCATED) | MIT OR Apache-2.0 | ["https://github.com/Limen-Neural/neuromod/pull/5","https://github.com/Limen-Neural/neuromod/issues/(...TRUNCATED) | feature | feature | [{"detail":"Cleanup artifacts=success, Upload results=success, Agent=success, Prepare=success","resu(...TRUNCATED) | null |
End of preview. Expand in Data Studio
Operation Prometheus — software-engineering trajectories
Pull-request engineering trajectories extracted from public GitHub history by operation-prometheus: issue/review signal → code state → patch → validation → outcome.
- Records: 96
- Format: JSONL (
trajectories.jsonl), schemapr_trajectory_v0/trajectory_v1 - Languages: Julia, Python, Rust, SystemVerilog
- sha256:
67090714f80e9482…
Record fields
id, repo, pr_number, source_urls, language, domain, task_type,
before_context, patch, validation, outcome, training_use,
issue_context, review_signals, quality_score, source_license.
training_use buckets:
| Bucket | Records |
|---|---|
bug-prediction |
3 |
feature |
39 |
repair |
22 |
review-to-patch |
21 |
validation |
11 |
Source repositories and license / provenance
Each record's source_license is the license of its originating repository —
this dataset is not under a single blanket license, which is why the card
declares license: other / mixed-per-record rather than MIT or Apache-2.0
for the whole. The export tooling and schemas are Apache-2.0; that does not
relicense source-derived content.
License set represented: Apache-2.0; MIT; MIT OR Apache-2.0.
| Repository | Records | Source license |
|---|---|---|
| Limen-Neural/axon-encoder | 3 | MIT OR Apache-2.0 |
| Limen-Neural/brainstem-daemon | 4 | MIT OR Apache-2.0 |
| Limen-Neural/limbic-critic | 4 | MIT OR Apache-2.0 |
| Limen-Neural/myelin-accelerator | 5 | MIT OR Apache-2.0 |
| Limen-Neural/neuromod | 5 | MIT OR Apache-2.0 |
| Limen-Neural/nir-rs | 4 | MIT OR Apache-2.0 |
| Limen-Neural/synaptic-mesh | 5 | MIT OR Apache-2.0 |
| rmems/LiquidCortex.jl | 3 | MIT OR Apache-2.0 |
| rmems/SpikeStream.jl | 4 | MIT OR Apache-2.0 |
| rmems/Theseus-Quarry | 5 | MIT |
| rmems/agoge-forger | 4 | Apache-2.0 |
| rmems/corinth-canal | 12 | MIT OR Apache-2.0 |
| rmems/engram-parser | 1 | MIT OR Apache-2.0 |
| rmems/grok-ozempic | 12 | MIT OR Apache-2.0 |
| rmems/kinetic-signals | 5 | MIT OR Apache-2.0 |
| rmems/silicon-hdl | 5 | MIT OR Apache-2.0 |
| rmems/spike-viz | 3 | Apache-2.0 |
| rmems/thalamic-relay | 3 | MIT OR Apache-2.0 |
| rmems/writ | 5 | Apache-2.0 |
| rmems/xai-dissect | 4 | MIT OR Apache-2.0 |
Intended use
SFT / process-supervision for coding agents: feature implementation, repair, validation discipline, and especially review-to-patch — responding to human review comments with corrective commits.
Exclusions and limitations
Per the data policy: no secrets, private configs, model weights, closed-model chat logs, or bot boilerplate (review bots like Gemini/Codex are retained as signal). Large patches may be truncated (~96 KiB cap). Solo-maintainer repos: limited multi-human review. Inspect records before training use.
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