Datasets:

marin-dna
/

functional-cds

query_name string	source_chrom string	source_start int64	source_end int64	region_label string	species string	alignment_name string	assembly string	taxonomy_id int64	family string	clade string	phylogenetic_rank int64	alignment_source string	t_chrom string	t_start int64	t_end int64	t_strand string	t_src_size int64	pre_resize_t_start int64	pre_resize_t_end int64	fragment_count int64	aligned_bases int64	sequence string	augmentation string
fa1_cds_3_000101727334_000101727589	chr3	101,727,334	101,727,589	cds	Nesogale talazaci	Microgale_talazaci	GCA_004026705.1	2,583,312	Tenrecidae	mammals	1	zoonomia_cactus	MicTal_scaffold_18337	1,673	1,928	+	80,737	1,800	1,801	1	1	CAGATTTATATTTTATTTCCAAGAATAACGAGATGTTTTTTCCCACAGTTGTCAGTGGCTAATAATCGGTTGGTAAGGATGATGGGTGTGGCCAAACTGACCCAGCTGCGGGTATTAAATTTGCCTCATAATAGCATTGGCTATGTGGAAGGACTCAAGGACCTAGTACATTTGGAATGGCTGAATTTGGCAGGAAATAATCTCAAGGTGATTTTTCTTTTTTAAATTACAAAAATATCCGCTGTGAAACGATGA	+
fa1_cds_1_000110211479_000110211734	chr1	110,211,479	110,211,734	cds	Myocastor coypus	Myocastor_coypus	GCA_004027025.1	10,157	Myocastoridae	mammals	1	zoonomia_cactus	MyoCoy_scaffold_17983	1,376	1,631	+	62,246	1,503	1,504	1	1	GGAGCCCTGCAGCGCTTCTTATGATCAGCTCGGTGTGTGTCTCCTCCTACCGCGGGCGCAAGTCGGGGAACAAGCCTCCGTCCAAAACATGTCTGAAGGAGGAGATGGCCAAGGGCGAGGCGTCGGAGAAGATCATTATCAACGTGGGCGGCACGCGACATGAGACCTACCGCAGCACCCTGCGTACCCTCCCCGGCACCCGCCTTGCCTGGCTGGCCGATCCCGACGGCGGGGGCCGGCCTGAGCCTGATGGCG	+
fa1_cds_4_000023813797_000023814052	chr4	23,813,797	23,814,052	cds	Giraffa tippelskirchi	Giraffa_tippelskirchi	GCA_001651235.1	439,328	Giraffidae	mammals	1	zoonomia_cactus	LVKQ01S003954.1	713,841	714,096	-	797,913	713,968	713,969	1	1	AGCAGACAAGACCAGTGAACTGAGGGACAGTGATTTCAGTAATGAACAATTCTCCAAACTACCTATGTTTATAAATTCAGGACTAGCCATGGATGGCCTGTTTGATGACAGCGAAGATGAAAGTGATAAACTGAACTCCCCTTGGGATGGCACGCAGTCCTATTCATTGTTCGATGTGTCGCCTTCTTGTTCTTCTTTTAACTCTCCATGTAGAGATTCCGTGTCACCACccaaatctttattttctcaaagacc	-
fa1_cds_7_000100572397_000100572652	chr7	100,572,397	100,572,652	cds	Miniopterus schreibersii	Miniopterus_schreibersii	GCA_004026525.1	9,433	Miniopteridae	mammals	1	zoonomia_cactus	MinSch_scaffold_11040	96,738	96,993	+	98,002	96,865	96,866	1	1	CAAGGAACCCGTGGAGCTAGGTCTTGGCTCCCCCTGGCTCATCTGTAGGAGGCCAGTGAGGGCGATCAGCTCAGGCCCACTGAGCCAGGCGGTGCAGCAGCCAGGGGATCGTGTGGGGCTGACCTGGTGGGACATGATAGGGGGCGGGAGCAGCAGCTTCAGAGATCCCATCACCTGAGGAGAGAGGAGGGGGAAGTGTCTCCTCCCAAGCCCTGCATGAAGGCTGAGATGAGGCCAGGACAGAAAAAGTGCTCA	+
fa1_cds_17_000044904321_000044904576	chr17	44,904,321	44,904,576	cds	Chrysochloris asiatica	Chrysochloris_asiatica	GCA_004027935.1	185,453	Chrysochloridae	mammals	1	zoonomia_cactus	ChrAsi_scaffold_77306	6,820	7,075	-	17,254	6,947	6,948	1	1	GATCGTCTTCCTCTTCTCACAGGACACTATGCAGCTCCGAACCAGCAGCTCAGGTGTGTGGGCCCTGGCTATGGTCCACAGTTTCTTTGGCACAGCCTGCGAACCACAGGACACCACATTGGGCAGCGTCTTGCGGTAACGTGGGGAGAGGCCTGGGCTCTGTAGGTAGCAGAGGCCAATGCGCCACTGCTCCCCACGTACCCCACAGCGATCACAGGGGGTCCACTCCCAGAAAGTAGTGAAGACATGGAGGTC	-
fa1_cds_11_000071435613_000071435868	chr11	71,435,613	71,435,868	cds	Scalopus aquaticus	Scalopus_aquaticus	GCA_004024925.1	71,119	Talpidae	mammals	1	zoonomia_cactus	ScaAqu_scaffold_34091	21,427	21,682	+	30,783	21,554	21,555	1	1	GCACCTGATCCCGCTCTCTCACCCCGCAGGGCCTGTACCTGGTCTACCACCCCGTGCAGCTGTCCGCCCCCCACGCGCTGGGCGTCCTGCTGCTGGGCCTGGTGGGCTACTACATCTTCCGCATGACCAACCACCAGAAGGACCTGTTCCGCCGCACGGACGGGCGCTGCCTGGTCTGGGGCCGCAAGCCCCAGGCCATCGAGTGCGCCTACACCTCGGCCGACGGCCAGAAGCACCGCAGCAAGCTGCTGGTGT	-
fa1_cds_16_000077884577_000077884832	chr16	77,884,577	77,884,832	cds	Hydrochoerus hydrochaeris	Hydrochoerus_hydrochaeris	GCA_004027455.1	10,149	Hydrochaeridae	mammals	1	zoonomia_cactus	HydHyd_scaffold_8918	132,338	132,593	-	175,056	132,465	132,466	1	1	GTCTGTAATCAGCACTGTCTCTCCTTTCAGTGGTGGCAGGTGGAGAAAGTGAACCCCATCAAGCTATATGAAGAGAACAAAGTCATCGCTGGCTTTTCCCTCTTAAACCTGCTCTTCAAACAGGGCCGTGCCGGCCTCATCCGAGGAGTGGTGGACAAACTCCTAGCGCTCTACAACCAGAAGAAGATCAAGCCTGTGGTAGATTCCTTGTGGGCCCTGGAGGAGGTAAGAGTGGGGTTTTTTCTCCCCAGGCAA	+
fa1_cds_2_000181901745_000181902000	chr2	181,901,745	181,902,000	cds	Xenopus tropicalis	xenTro7	JGI_7.0/xenTro7	8,364	Pipidae	amphibians	4	ucsc_multiz100way	KB021661	23,429,929	23,430,184	+	100,021,500	23,430,056	23,430,057	1	1	GAGTTGCAATCTGAAGTTACCCGATTACCATACAAATTAAGCTTGGATATGGTTTCCATTAGCCTGCTTGAGGACCTTACCAGAGGTGCTGGCTTGGTAGGTTCTTGATCTTTATCAGGTATCAGAGCTTTGGAACTGCCTATTCTTTGAAGTGGAGTTCCACTAACTTGAGAGTATAAAGAAGAAAATGCATTTGCCACTTCAGTAAGGACTTTAATCTGGCGAAAACGACCTGAGGAAAACGACATGAAAACA	-
fa1_cds_12_000012942167_000012942422	chr12	12,942,167	12,942,422	cds	Sus scrofa	Sus_scrofa	GCF_000003025.5	9,823	Suidae	mammals	1	zoonomia_cactus	GL894707.2	15,032	15,287	-	30,564	15,159	15,160	1	1	CCACAAGCCTTTAGGAGTGACCCTGCCCTGCCTGCGTCTCTTCTCCCAGGTCAGTACAGCTGTTGGAGGTGAAGCGCAGACAAGCACATTTACCTGCGGCTGAGTGGGGGAACCATATGAGGTTAATGCTACATCCTCCTCAGCGCCTTCACTGTCTCGGGCTGAAAGCCAAAGGAGGGAGGGCTGGGTTAGTGTCAGAGATTCACCTGGAAACAGCACATGAGGGCTATACGACTCAGTGGCTGGCAGAGAGGC	+
fa1_cds_X_000048904956_000048905211	chrX	48,904,956	48,905,211	cds	Miniopterus schreibersii	Miniopterus_schreibersii	GCA_004026525.1	9,433	Miniopteridae	mammals	1	zoonomia_cactus	MinSch_scaffold_7003	82,495	82,750	+	131,129	82,622	82,623	1	1	AGCCAAAGAGGCGGATGGAGGCAACAGTGGACAGCACGATGGACAGGGAGGTGGCAAAGCCCTTGAGGATGTTGTCAGCGTACTTGACAACAACAGCCACCAGTAGCCCACCAAATGCCTGGTTGAGCACCACACCCCAGACAGCAGGCGTATATCCAAAAAAGAACCCACGGTGGGCCACAGCAGTGCCCTCAGCCCACCAGAGTCCCACCAGGCCCAGTGCTGTGCCGAAGAGGCCCAGCTGCAGGTTGCGCA	+
fa1_cds_13_000110152292_000110152547	chr13	110,152,292	110,152,547	cds	Platanista gangetica	Platanista_gangetica	GCA_054084255.1	118,798	Platanistidae	mammals	1	zoonomia_cactus	PlaMin_flattened_line_191414	5,415	5,670	+	6,215	5,542	5,543	1	1	CCACCGGGGGGGTGGGGAGGGGGACGAGGGGGGCACTTTACTTGAACATCTGGCTTCTTTCTATCGTGGCAAGCCAAAAGCTGTAAGCGTTTGCATAGTAATTGCAAGTCCCGCGGCCGTGGCACTCGATGAAGGGGGCACTTCTGAACTCTTCCAGACAGGACCCAGGGGAGGCCAGGGCTTGGCCAGAACCTTCGGCTCCGGCGCTGGTGTGCTGCAGGGAAACAGGAGCCGTGAGCCAGAGGTGCCTGCCCA	+
fa1_cds_11_000065625851_000065626106	chr11	65,625,851	65,626,106	cds	Tolypeutes matacus	Tolypeutes_matacus	GCA_004025125.1	183,749	Chlamyphoridae	mammals	1	zoonomia_cactus	TolMat_scaffold_115735	7,518	7,773	-	15,107	7,645	7,646	1	1	CCCGTGGCTCCGGCCTGCTCCCAGGGCTGAGCCTCCCGCCTCCCCTTTGCAGTCGGTGCTGGGCTTCGTGCTGTACGCGCTGGCCGGCGCCGTGGGCTTCTTCACCCACTACCTGCTGCCCCAACTCCGCAAGCAGCTGCCCTGGTTCTGCCTCTCGCAGCCCGTGCTGAAGCCACTGGAGTACAGTCAGTACGAAGTGCGCGGTGAGTGCCCCCCCCGGGCAGCGGGCCCACCTCCCCTCCAGACCTCCTGCCG	+
fa1_cds_22_000019385500_000019385755	chr22	19,385,500	19,385,755	cds	Taeniopygia guttata	taeGut2	taeGut324/taeGut2	59,729	Estrildidae	birds	2	ucsc_multiz100way	chr15	8,177,410	8,177,665	-	14,428,146	8,177,537	8,177,538	1	1	ACATCTTTTATGTCCCCAGAGCAACATTCACCAGTCCACCTATGGCAAAAGCCTGGCTATCATGACTGAAGCTCAGTTGTCCACCACCATTATTGAGAATCCAGAGATGCTGAAGTACCAGCAGAGACAGCAGCAGCAGGGGGATCAGAAGAACGCCTCAATTCGGGAAGGCTCTGGCAATGCCACAGCTCCCAAAGTGGCAAGCATGGTTAATGGGGAGAGTCTGGAGGACATCAGAAAGGTAGGTGCTCTTGG	-
fa1_cds_8_000124556191_000124556446	chr8	124,556,191	124,556,446	cds	Hipposideros armiger	Hipposideros_armiger	GCA_001890085.1	186,990	Hipposideridae	mammals	1	zoonomia_cactus	JXIK01000079.1	4,157,339	4,157,594	-	4,550,294	4,157,466	4,157,467	1	1	CTAGAGGGGCCCACCCAGCTGTAGAGAACAAGAGCGTCACCCTGGTGGCAGCCGACACAGTCATGCTCCGCGGTCTCTGAGCCTCCTCTGCGGCGGCAGGCGCGCCACCCACGGCAGCGGGTCCTCCTCCGCTGGGGTCCGGCTCCCGCTTCTCCTTGCGGCGCTGTAGGGTATTCACCAGAGGCTGGTCATAAGGCCCTGGCTTGGCCCAGTCCTAAGCAGAACAAGCGTGGTCAGGCGCCAGGGCCTCCATTT	+
fa1_cds_11_000001277020_000001277275	chr11	1,277,020	1,277,275	cds	Pseudopodoces humilis	pseHum1	PseHum1.0/pseHum1	181,119	Paridae	birds	2	ucsc_multiz100way	KB221201	4,529,598	4,529,853	-	17,197,028	4,529,725	4,529,726	1	1	ttcttctgtttttaaccTGTAGGGGTGCCTGCAGTCTGTAATCCAGGCATGGTACCAGTGGCAATACCACCTCCTGCTGTCAACCCTCAGCACCTGTGTAATGAAGAGGACCTGAAATCTATCCAGGATATGTTTCCCAACATGGACAGGGAAGTAATCCGCTCAGTGTTAGAAGCTCAGAGGGGGAACAAGGATGCAGCTATCAACTCCTTACTTCAGATGGCTGAAGAATCATAGATGCCTGCTTCCTGCGTA	-
fa1_cds_2_000040139380_000040139635	chr2	40,139,380	40,139,635	cds	Hystrix cristata	Hystrix_cristata	GCA_004026905.1	10,137	Hystricidae	mammals	1	zoonomia_cactus	HysCri_scaffold_256	205,011	205,266	-	317,760	205,138	205,139	1	1	CCCTCCTGTTTTGATTATGTGATGCACTTTCTGACTGTCTTCTGGAAGGTCCTGTTTGCCTTCGTCCCCCCTACAGAATACTGGAATGGCTGGGCATGTTTCATCGTCTCCATTCTCATGATTGGCCTACTGACAGCTTTCATTGGAGACCTGGCTTCCCACTTTGGCTGCACCATTGGCCTGAAAGACTCTGTGACTGCTGTTGTGTTCGTCGCACTGGGAACTTCAGTGCCAGGTACAGGACGAGTTCATGTA	-
fa1_cds_14_000035686476_000035686731	chr14	35,686,476	35,686,731	cds	Dasyprocta punctata	Dasyprocta_punctata	GCA_004363535.1	34,846	Dasyproctidae	mammals	1	zoonomia_cactus	DasPun_flattened_line_1210	36,911	37,166	-	202,656	37,038	37,039	1	1	TATATTTTTAGTTTTCTTAACCTTCCACTCTAAAATCAAATAAGTAAAGTAAAAATACAACTTACCGAGGCATTACCACTTCGCAGTCGTTCGGCTATAAACTCATCCATCAAGTCAGGAACATTAGCACTGCTGCTGCCAATATCACTATTAAGAGGAGGCAGTTTGGGGCTCATGTCCTCTTTATTGACTAAAAGTAAATAAATAACTATATATAGTGAGGAAAAACTTAACTGCATTTTCTAAATGTGAAGC	+
fa1_cds_X_000084321825_000084322080	chrX	84,321,825	84,322,080	cds	Geospiza fortis	geoFor1	GeoFor_1.0/geoFor1	48,883	Thraupidae	birds	2	ucsc_multiz100way	JH739939	4,374,983	4,375,238	-	5,262,657	4,375,110	4,375,111	1	1	tctctgtctctgtgtctCCTCTGCACCTCGCTGGGGTTTGTGCTgtgtctccagagcagagcatcaCAAACTGTCTGAGGCGTTCTTCTCCGACAGCGACGAGAGGCTGAATGAGGTATCGTCGGGCTCCGGGGAGGTGTGGTTGAAATCcatctcttccagctcaggaggtAAGTCTGAAAGCAGAGCCTACAAGGGAAAAACGTATCCAACATCTGGTGTATACAGTATTAGGTGTGGGTTTTATGTCAGCAG	+
fa1_cds_9_000006014832_000006015087	chr9	6,014,832	6,015,087	cds	Pithecia pithecia	Pithecia_pithecia	GCA_004026645.1	43,777	Pitheciidae	mammals	1	zoonomia_cactus	tarseq_16	17,806,341	17,806,596	-	20,182,340	17,806,468	17,806,469	1	1	AGTACTTAGGTACCGTATCTGCAATCTCAACAAGGGATTCTAGCACTGAATCATCATCCTGATAGCATGAGTCATTCACAGCCTGTAAGATTCCAGGAAGCAAGTCTGCGAAGTCTTTGAAAAGAGCAATATTATTCTCATTAGCAAGTACAAATGCAGCTGCAGCTCTAGCGGATAATGTCCTGATTGCTGGATGTTCTTGATCTTGAATACACTGGTCCAACAACCGTTTGATGATATCCAAATCATGCCGCT	+
fa1_cds_19_000042333982_000042334237	chr19	42,333,982	42,334,237	cds	Loxodonta africana	Loxodonta_africana	GCF_030014295.1	9,785	Elephantidae	mammals	1	zoonomia_cactus	GL010031.1	392,159	392,414	+	100,893,473	392,286	392,287	1	1	GCACTCGGTTGGGGACAGGCTCACCGAGGCACAGGTGCCGTGGCTGCCACAGTAGGCTGAGCACTCTTGCAGGCCGCAGTCCGGGCCACCCCAGCCCGGCTCACAGGCACACACACCTGGGGGCTGGCACTGCCCGTGGCTCCGGCAGTCCCCCAGGCACAGAGAGAAGCGGAAGGAGGCGTTGAATCCCAGCAGGTTGTAGTTGGCATCGCTGAAGATGTGCAGCAGCATCTGCCGGCACAAGGTGGGGAGGGC	-
fa1_cds_7_000128028917_000128029172	chr7	128,028,917	128,029,172	cds	Inia geoffrensis	Inia_geoffrensis	GCA_004363515.1	9,725	Iniidae	mammals	1	zoonomia_cactus	IniGeo_flattened_line_2775	29,389	29,644	+	132,403	29,516	29,517	1	1	TGTCTTCATCCACCTGGATAATCTCAACAGTCCGGGCAGCTGTGACTGTACTCCTCTGCTGGTGCCGCTTGCGAAGTTTATAGAAGACAATCAACATGGCAGCAGCTAGCAGAGTCACTGCCACGAAGCAGCCAATGATGATCTTGGTGGTCTTCATGACTTCATCCAGGCTGGTCTGCATCTTATCATTGGTGTCCGTCGCGGTTACCGCCACCTGCTTGGGCACACGGGTGGTCTGAATGAGCACCGTGGTAG	+
fa1_cds_14_000024069064_000024069319	chr14	24,069,064	24,069,319	cds	Tolypeutes matacus	Tolypeutes_matacus	GCA_004025125.1	183,749	Chlamyphoridae	mammals	1	zoonomia_cactus	TolMat_scaffold_106339	12,650	12,905	-	16,059	12,777	12,778	1	1	TCACAGCCTGGAGGAGTGCTCCAGCCTGTGAGCCCCGCTCGTGTACCAGGCCTGCCTCGGCTGTCATTTCAGGTCCCCCTGACCCAGGCCGCCGGACCGCCCCCCTGAAGCCCAAGAGGACGCGAAGAGCACAGTCCTGCGATAAGCTGGAGCCTGATCGGAGACGGCCCCCTGACCCCACAGGTGCCCTTGGGGAGGGGAGAGGATGGGACCCCCTTCCCACTGTCTTTCCAATATGCCCCCACCCCCACCCCA	+
fa1_cds_19_000018141821_000018142076	chr19	18,141,821	18,142,076	cds	Trichechus manatus	Trichechus_manatus	GCF_000243295.1	9,778	Trichechidae	mammals	1	zoonomia_cactus	JH594728.1	5,039,730	5,039,985	-	8,875,436	5,039,857	5,039,858	1	1	GGGTGTGGCCACCTGCCACCATCGCtgttgtttttactgttatttttattctttgcccAGGTTTACAGCAGCTCCGAGTTCCTAGCTGCCCAGCCCACCCCAACCTTTGCTGAAAGAAGCTTCAGCGAGGACCGGGAGGAGGGTTGGGAGCGCAGCAGTGAGGTGGAGTCTAGCCGCCGGCTGAGCACTGACGTCCGGTATGTAAGACAGGGAGTACAGGCAGATCCAGCTTCTAAGACTGCTGGGAGGTAGAGC	+
fa1_cds_17_000007905005_000007905260	chr17	7,905,005	7,905,260	cds	Ceratotherium simum	Ceratotherium_simum	GCF_000283155.1	9,807	Rhinocerotidae	mammals	1	zoonomia_cactus	JH767766.1	10,557,403	10,557,658	-	19,882,732	10,557,530	10,557,531	1	1	CAGAAGTCTCTGAGGGGAGACATCCAGGCAGAAAGGGCCTTGAAGGGCTTATCCAGGGATCCATCACTGACCGCTGAGCCCTTTCCCCTCACAGATAACCAGTCAGAATACTCAGTGGGatcagaggaggaagatgaagactTTGATGAGCGTCCTGAAGGTGGCATGTTTTCCTGACCTTCTGTCACAGCTCTTCCCATTTCACTTACCCATGTCCTTTAAGCCCACTTTTTTAAGtacaaataaatgcttttt	+
fa1_cds_14_000054764370_000054764625	chr14	54,764,370	54,764,625	cds	Gasterosteus aculeatus	gasAcu1	Broad/gasAcu1	69,293	Gasterosteidae	ray-finned_fish	6	ucsc_multiz100way	chrII	21,836,155	21,836,410	+	23,295,652	21,836,282	21,836,283	1	1	CACAGAAACACCTCGTCGAGCCGTGTGGGTCAAACTCAATTTCTCCATGTGACATAAAAAGAGCGTTCCGGGGGGGCGGGGCTACCTCGTGGACAAGGCACTTGTCGATGAGCTGCAGGTAGGAGCTGATGTTGTCCTCGTCTGACCTGGACACCAGCAGCTGGGTACAAACTGAGGACGGAGACGTGAGCGTTAGAAGCAATCACAAACCTCTCCGGGTGACCCGGCACACCCTCGACCCGAGCGGCCCACCTT	-
fa1_cds_14_000092080885_000092081140	chr14	92,080,885	92,081,140	cds	Macroglossus sobrinus	Macroglossus_sobrinus	GCA_004027375.1	326,083	Pteropodidae	mammals	1	zoonomia_cactus	MacSob_scaffold_3282	103,402	103,657	+	338,875	103,529	103,530	1	1	AACTGTAAGTTCACAAATCGACAAAATAGCCAAAGTAAATATTGAATATGCAATTTTAATATTGTACCAACTACTTTACTTTTCAAAGTAGGCTTCTCTTCTCTTTCGTAGCTCTTCTGAAGTAAGATGTGTACCTGATGTCTGTGGAAGATCTTGAGATATAGTTCTGGAACTACCTGGAAACAAAAGAAAACACAACAAAAACAATCATTTTATTTACCAGTTAAAACAACATATGTTTATACTTATGTGAAC	+
fa1_cds_13_000109785605_000109785860	chr13	109,785,605	109,785,860	cds	Otolemur garnettii	Otolemur_garnettii	GCF_000181295.1	30,611	Galagidae	mammals	1	zoonomia_cactus	GL873680.1	3,271,718	3,271,973	-	4,149,433	3,271,845	3,271,846	1	1	GGTCGGCGCCGCAGCCGCCGCGGCTCGAGTACTACGAGAGCGAGAAGAAGTGGCGGAGCAAGGCGGGCGCCCCGAAGCGGGTGATCGCGCTAGACTGCTGCCTGAACATCAACAAGCGCGCCGACGCCAAGCACAAGTACCTGATCGCCCTCTACACCAAGGACGAGTACTTCGCGGTGGCAGCAGAGAACGAGCAGGAGCAGGAGGGCTGGTACCGCGCGCTCACCGACTTGGTCAGCGAGGGCCGCGCCAGCG	-
fa1_cds_14_000105211080_000105211335	chr14	105,211,080	105,211,335	cds	Vicugna pacos	Vicugna_pacos	GCA_000767525.1	30,538	Camelidae	mammals	1	zoonomia_cactus	KN267165.1	315,846	316,101	-	3,403,064	315,973	315,974	1	1	CAAGTTTCCTCCCGGGTGAAACAGTGTGCAGAGCCCCTCACCGTCGCCCCCCATCATCTGCAAGGCGCTGACACAGGGCTCGCCGtcctcctcgtccgcgtcctcctcatctgcgtcctcctcGGGGTGGTACGACACTGGCCCGCTCTCCACCACGACTGCCGTGGGCCCGCCGGGCTcagcctccagggaggaggggcttggGAGCAAGGCCTGCGGCTGCTGAGGGGACAAGCTGGGGACAGGGCGGAGCAC	+
fa1_cds_2_000202757192_000202757447	chr2	202,757,192	202,757,447	cds	Galeopterus variegatus	Galeopterus_variegatus	GCA_004027255.1	482,537	Cynocephalidae	mammals	1	zoonomia_cactus	GalVar_scaffold_9531	57,992	58,247	+	95,762	58,119	58,120	1	1	TTTCACAAATTTTATAACAGCCACAAGATATTCCAGATGGCCATCGTGCACCTCCTCCTCTTGTACAGAGAAGCAGCAGCACACGCAGCATCGACACACAGACCCCCGGCGGGGCAGACAGGGGAAGCAACAACAGCAGTCGCTCTCAGTCTGTGTCTCCCACATCATTCCTCACCATCTCCAATGAAGGTAGTGAAGAGAGTCCTTGCTCAGCTGATGACCTGCTTGTTGATCCCAGGGATAAAGGTATGATGG	+
fa1_cds_3_000049114043_000049114298	chr3	49,114,043	49,114,298	cds	Oryctolagus cuniculus	Oryctolagus_cuniculus	GCF_000003625.3	9,986	Leporidae	mammals	1	zoonomia_cactus	CM000798.1	16,730,769	16,731,024	+	116,251,907	16,730,896	16,730,897	1	1	GAGTCCAACACCTCGCTCGCACTGGAGCTCTCCTTGCTAACGCTCACCAGGAACTGTGGCAGTGAGGGCAGAGTCAGCAGGGGAGGAGGGCCAGCTTCCCCGGGAGAGCCAAGTGCAGAGGCCTCCTCACCTTCACGGGCTTGCTGTGAGGCTCTCGGGCAAAATAGAAGACGGGGAGAACCTTCTGCTTTTGTGGCAAGGGCACCGGCAGATAAAGGAACGGGTCAAAAGTGATGGAGACCTGTGGACACGGAG	+
fa1_cds_9_000097611509_000097611764	chr9	97,611,509	97,611,764	cds	Solenodon paradoxus	Solenodon_paradoxus	GCA_004363575.1	79,805	Solenodontidae	mammals	1	zoonomia_cactus	SolPar_flattened_line_1316	506,957	507,212	+	640,740	507,084	507,085	1	1	GAGGAAGGAGGCATTAAGGCAGAAGCAGACGGCTCTAAACCCATTTTACTTTCAATCCTCTTACCTTAAAATCATCCTTGCACAGATAATCTTTAAACAGTGGGCAGGAAAGCATGACTTCCACATAGAGTCTGGTGGCCAGCTGGCTCCCACCAACTGTCCCATTGATTCCTTCTGTAGCAATTCGAATCTGAGACATAAAATGATGAGACAAAGGGAATGCAGCCTGTTCTGAGTTTAGATTAAATCTTTTGG	+
fa1_cds_10_000051153119_000051153374	chr10	51,153,119	51,153,374	cds	Pelodiscus sinensis	pelSin1	PelSin_1.0/pelSin1	13,735	Trionychidae	reptiles	3	ucsc_multiz100way	JH208382	2,713,881	2,714,136	+	3,113,785	2,714,008	2,714,009	1	1	TAAAATGTCAGACAAGTGGATAAATCTTGCCTTTCTTACCATAGGTCCAAGGATCTAATAAAGGAGGCAATCCTTGACAATGACTTCATGAAGAATCTAGAACTATCTCAGATCCAGGAGATTGTGGATTGTATGTATCCAGTGGAATATGGCAAAGACAGTTGCATCATCAAAGAAGGAGATGTGGGTTCACTGGTGTATGTCATGGAAGGTATGGTTTGTAACCCTGACACTTTGACCATTCTGTTTAAATAT	+
fa1_cds_17_000077206667_000077206922	chr17	77,206,667	77,206,922	cds	Solenodon paradoxus	Solenodon_paradoxus	GCA_004363575.1	79,805	Solenodontidae	mammals	1	zoonomia_cactus	SolPar_flattened_line_31962	2,615	2,870	+	2,887	2,742	2,743	1	1	AGTGCGCCCCGCCCTGCTCACAGGCGCCTGCCCTGCTGCTGCCCCACGTCCCCCCTGCAGATCAGCCCCTTCATCAACGAGAACACCAGGCAGAAGTTCCTCATCTACAGCGGCAGTCACTACCAGGGCCCGGGGGGCCTTGTGGATTACCTGGGCAGAGAAGTGATCCCCGACTTCCTCGGCGGGGAGTGCGTGGTGAGGGCCTGTGGCTCCGGGAGGGAGGTCTGTGGCCTGGGAGGACAGGGGACCCTGAGC	+
fa1_cds_X_000063754448_000063754703	chrX	63,754,448	63,754,703	cds	Platanista gangetica	Platanista_gangetica	GCA_054084255.1	118,798	Platanistidae	mammals	1	zoonomia_cactus	PlaMin_flattened_line_9081	52,098	52,353	-	59,020	52,225	52,226	1	1	GCCCTTCCCTAACCCCTCGACTTCCTCTTCTCCTTTCTAGCATGGTGGCTATATGGACAGTCTGACGGAACAGAGACTGGCATCTCCCCATCTGGAGCATTACAGTGCTCTGCATTTTGCACCATGACCCTGGATGCGCAGACTGTTGTCGTTTTTGCCGTGATCCTAGTCCTACTTATCAATGTCATACTCATGTTCTTCCTGGGAACGCGCTGGATGGAGTCCAGTCTCCTCAGCTGTTGCAAAATCTTGCTT	-
fa1_cds_X_000019456838_000019457093	chrX	19,456,838	19,457,093	cds	Xiphophorus maculatus	xipMac1	X_maculatus-4.4.2/xipMac1	8,083	Poeciliidae	ray-finned_fish	6	ucsc_multiz100way	JH557120	81,587	81,842	-	318,034	81,714	81,715	1	1	tcgtatttgttttttaaaagtttttttaaaatttatttttcacctggTTATGTTTGTCTTGAACTGATAAACAGGATTATGATGCTATGGTTAAGCTTGTGGAGACTCTAGAGACGCTGCCTACTTGTGATCTGGCAACCCAACCGATGATCCAGTTCCACTACGCCTTTGCTCTCAATAGGTAAATAATACCCATGTTATGCTTTTCCTTTGTGACGAAATAGTTAAAactttactaaaaataaatttagtgtT	-
fa1_cds_1_000156582978_000156583233	chr1	156,582,978	156,583,233	cds	Muscardinus avellanarius	Muscardinus_avellanarius	GCA_004027005.1	39,082	Gliridae	mammals	1	zoonomia_cactus	MusAve_scaffold_48662	4,551	4,806	+	31,642	4,678	4,679	1	1	GGGGCAGGCTCCCGATGCCTTGCAACCTGAGTCCCCTCTTAGGACGGTGCACTCTGTCTTCAGGCTGTCTGGGACAGCGGTGGGAGCAGGGCCGGAGCTTTGGCAGCCTGGCATTTGCCCTGAGCCAGCTGGGTGACCATAAGGCCGCCAGAGACAATTACCTGCATGCCTTGCGGGCTGCCCAGGACGCCGGTAAGGGGAGGGGTTAGCACAATCCTGGGTAAGGGATACCCAAAGACTAAGGATCCTGGGGAC	+
fa1_cds_8_000089771638_000089771893	chr8	89,771,638	89,771,893	cds	Mus musculus	Mus_musculus	GCF_000001635.26	10,090	Muridae	mammals	1	zoonomia_cactus	chr4	16,139,101	16,139,356	-	156,508,116	16,139,228	16,139,229	1	1	CTTTACCTCATCATCCTCAAAAATGgtgggatttttttaaataattctataTAGTTTATATACAAAGTTTGCTTACAATGTATAACTTTCTAACTTAAACAGCTATGCAGTTATCATGTGGGAAGTGTTATCCAGAAAACAGCCTTTTGAAGGTACGTATACTTTTATTCCAGAGGACATCATGTGGGTGGTACACGTCTCAACTGTCTAAACCTCACCAGATTTTAAATATACCAGCCATTCATTTTGTACACA	+
fa1_cds_15_000082553807_000082554062	chr15	82,553,807	82,554,062	cds	Hydrochoerus hydrochaeris	Hydrochoerus_hydrochaeris	GCA_004027455.1	10,149	Hydrochaeridae	mammals	1	zoonomia_cactus	HydHyd_scaffold_228	162,352	162,607	-	806,841	162,479	162,480	1	1	CAAAGTTCATGCTCCTGAAAGACAGGTTCCACCTTTAGCTTTGAAGCAGGATGTCCTGGAGGCAGCTCACCTTCCGTAATATCCCAAGGAACACCTCCTAAGAACACCTTGCAAGAGTAGATGGGATTTTTATAGTTCCGGGGAGGAAGCTGGCCACTCCAGGTACAGGTGGCTTCGTTCACAGCTTTGGTAGAAGAAACAGAAACAAGGAGTCAGAGGATCAACAAAGTCACATTTCCCTGGGATGAATTAGTT	+
fa1_cds_17_000002299397_000002299652	chr17	2,299,397	2,299,652	cds	Falco cherrug	falChe1	F_cherrug_v1.0/falChe1	345,164	Falconidae	birds	2	ucsc_multiz100way	KB398007	6,011,971	6,012,226	-	11,850,152	6,012,098	6,012,099	1	1	GGATATCAGTCTGGCAGATACAGATAAAAAGAAGCCTCTGAAGGCATTTGTTAGTTGCAAAGACTCAGAGCCTTTTGAGGCGAGGAACCAGAGCAGAGAGCCCCAAGGGAGGGGCCGTGGGATTCTGTTCCTGCCTGCCAACACTGATTTCTCTGCCAGCACCGTGGGCTCTCCTGAAGCCAGTCACCCTGGGCCCAGGCTCCTGCTCAGCGGGGCTGGGGGTAAAGGCCTCCGAAGCAGAGGCCGAGGCGGCAC	-
fa1_cds_12_000132574298_000132574553	chr12	132,574,298	132,574,553	cds	Loxodonta africana	Loxodonta_africana	GCF_030014295.1	9,785	Elephantidae	mammals	1	zoonomia_cactus	GL010140.1	2,964,520	2,964,775	+	3,408,981	2,964,647	2,964,648	1	1	TCTGTTGATGATGGTAGATCTGCCAGGCAATCTGCACGTGCACCGCACACCACTTCCCTGGTTTCTGCTGGGACAGAAGGGGGACAAGCTCAGGGAGGGCACAGCACCACCTcccgcccccacccctgcccGACATGCCCCAAGCTCCTCCCCCACCCAGGAGTGATCCCTTCCTCCCAGGGGAGGCACACGGACACACAAATACAGACATGCTCACATGCATAGACACACACTCGCATAATTTCATAggtacac	-
fa1_cds_19_000001041774_000001042029	chr19	1,041,774	1,042,029	cds	Hystrix cristata	Hystrix_cristata	GCA_004026905.1	10,137	Hystricidae	mammals	1	zoonomia_cactus	HysCri_scaffold_9649	42,184	42,439	-	105,226	42,311	42,312	1	1	CTCAGCGCCTCACCAGCTCCAAGTCCCCCAGCCACCCCACCACTGCCTCCTGCTCACAAGGACTCATTGAAGTTGCTGATGAACCCTGGCTCCTCCCCCAGCGTGGGCTTCGGGAAGCAGGAGTTGTTCACGTTGCAGATGAGACCCTGGAGCCAGGGGATGGTGCCGGCAGATGGCAGCGGCTTGTTGGGGAAGTGGCCTGCAGACAGATGTCTCTGCCTGAAGCCCCGCCTCTGCAGTCTCCTCCCTCCATCG	-
fa1_cds_15_000074721138_000074721393	chr15	74,721,138	74,721,393	cds	Dasyprocta punctata	Dasyprocta_punctata	GCA_004363535.1	34,846	Dasyproctidae	mammals	1	zoonomia_cactus	DasPun_flattened_line_1424	28,940	29,195	-	195,161	29,067	29,068	1	1	ATAGAGGTCCAGGTAGAGGTCTACTGAGGCCTGGGAAACCCCTTGGTCCATCTGGATCTTGTGTTTTGCAGACACCGTGATTGGCAGGGAGCGGTGGCCCCGGCTCACTGACCGAAGCCAGCTGCCCTACATGGAAGCCTTCATCACGGAGGTCTTCCGACACTCCTCCTTTTTGCCCTTCACCATCCCGCACAGGTGAGGCTGCCCAGGTCCCTGCTATCTGATACTGGGCCTTGCTGTAGTCCACACACCGAT	-
fa1_cds_5_000081440459_000081440714	chr5	81,440,459	81,440,714	cds	Mus musculus	Mus_musculus	GCF_000001635.26	10,090	Muridae	mammals	1	zoonomia_cactus	chr13	91,690,781	91,691,036	-	120,421,639	91,690,908	91,690,909	1	1	GACATGGAAGAGCTCTGCAGACCATAATACCCATGGactaaaattaacattttatttttaatttattctatcCATTTAACATAAAAGCCGAGCCTTACCTAAAGAGCCGTTCATGTGATGGGACTCCATTCCTCCTAATCCACCCATAGGACCATCTGATCCAGGGCCCATtggaaactgtttttaaaaatgaagaagtaaTTGTGACCACATGGAAAATGACTTTAACATTATTAACATTACAGATTGTCCTGG	+
fa1_cds_1_000161072643_000161072898	chr1	161,072,643	161,072,898	cds	Castor canadensis	Castor_canadensis	GCA_004027675.1	51,338	Castoridae	mammals	1	zoonomia_cactus	CasCan_scaffold_384	109,427	109,682	+	273,616	109,554	109,555	1	1	AGAGAGGCAGGCCTGGGTCAGACCAGGTGCCCCCGCCCGTTGATGTAGATACCATTGCCCGTGGGTTTGGCCCGCAGGGTCCCATTCTCCTGAACAAAGTGGTTCATGGCCTGTTTGATGCCTTCATCCTGATCCTCCTCCTCTGCCTGCCCAGAACCTGGAGATAGCAGTTCAGTCTGTGTTTCAATCTCCCTCACTGTGGTCAGTGTGGAGTAACTTCGGCCCTCCGGCTCTTCACTCTGGAGACCAAGGGCA	+
fa1_cds_16_000055691857_000055692112	chr16	55,691,857	55,692,112	cds	Geosciurus inauris	Xerus_inauris	GCA_004024805.1	3,371,099	Sciuridae	mammals	1	zoonomia_cactus	XerIna_scaffold_30283	32,773	33,028	-	47,794	32,900	32,901	1	1	CACCCTGTCCCTGGTGGGAGGCAGAGTGAGGTGTTCACAGCCAACTTGTCCAATCCCCAGGTGGTGTGGATCACGGCCACGCTGCCCTACCTAGTGCTGTTTGTGCTCCTGGTCCACGGCGTCACGCTGCCCGGTGCCTCGAACGGCATCAACGCCTACCTGCACATCGACTTCTACCGCCTAAAAGAGGCCACGGTCAGTGACTACCCAGGCTTGGGGTAGGGGGCAGGAGGGTTCTCAGGAGCAGATGGTGAT	+
fa1_cds_12_000085055654_000085055909	chr12	85,055,654	85,055,909	cds	Cryptoprocta ferox	Cryptoprocta_ferox	GCA_004023885.1	94,188	Eupleridae	mammals	1	zoonomia_cactus	CryFer_flattened_line_6202	4,494	4,749	-	202,730	4,621	4,622	1	1	TCTCACAATGTTCTTTTTTTCTTCATATTCTTTTTCTCTCCTCTTCCTTTCCTCTTGCTTCTGCTTTTTTGTCTCTTCTTCTATCTTTTGTTCTTTCTCCAATCTTTTCCGCTTTTCTTCTTCCATCTGTCGTATTTTTGCTTCTTTTTCTTTCCATTCCTGTGCTTTCCTTTTCTTACTTTCTATTTGTTCTTTTATGATTGGGCCATATTTTTGGTAGGCCACAAATGCTTTATATGTAGCTTGAATTTTTAC	-
fa1_cds_1_000222991456_000222991711	chr1	222,991,456	222,991,711	cds	Hippopotamus amphibius	Hippopotamus_amphibius	GCA_004027065.1	9,833	Hippopotamidae	mammals	1	zoonomia_cactus	HipAmp_scaffold_62	486,651	486,906	+	550,502	486,778	486,779	1	1	TCAGGCAATGTTTAAAAGTGGAATTCATTAGCAGTGTTTTGTCTAAAAGTTAATAAATGATTACCTTTTGGCTTGTTCATCTGCATATTTAAAGGGGTAATTTGCTAATGTTGCTTTGTATCCTGTATTTTTCACCATGTTATTCCATGTGACCAGTCTCTGGCCTATTGCAGTCCCTCTTGGTTCAAAACCCTAAGGCAAAATATTACAAATTCCCATTAGTGTACTTCATTCCAGGCCACATATAGTTGTAAC	-
fa1_cds_7_000050447037_000050447292	chr7	50,447,037	50,447,292	cds	Octodon degus	Octodon_degus	GCF_000260255.1	10,160	Octodontidae	mammals	1	zoonomia_cactus	JH651550.1	1,579,124	1,579,379	-	16,796,472	1,579,251	1,579,252	1	1	CTGCATAGTTATTCAAGCCAGCTTCCACATTGTCAGAATCGACAACTGCAGAGTATTTTTCCGCATATCTCTTGAAGAGTTTGGTAGCACAGACCTGGGAGATCTCAGTGCTCGCCCAGGCATACTGAATACGTAGTATCTGCGCACGATACGCATCTGCCTTCTGTGCCGGTGTACACGTGCCGGATGTGATTGCAAAGTAGTTCTTCTGCCACTCGCTCAGGTGCACAGACCGAGAGCTGGGGGCCTGCATCT	+
fa1_cds_2_000119247914_000119248169	chr2	119,247,914	119,248,169	cds	Equus caballus	Equus_caballus	GCF_000002305.2	9,796	Equidae	mammals	1	zoonomia_cactus	CM000394.2	11,842,513	11,842,768	-	82,527,541	11,842,640	11,842,641	1	1	CAAGAACAAGTTCTACAAGCTCCCGGTGTCCGTGGTCAACACGACGCTGCCGTGCGTGGCCTACGTGCTGCTGTCGCTGGTCTACCTGCCCGGCGTGCTGGCGGCCGCCCTGCAGCTGCGGCGCGGCACCAAGTACCGCCGCTTCCCGGACTGGCTGGACCACTGGCTGCAGCACCGCAAGCAGATCGGCCTGCTCAGCTTCTTCTGCGCCGCGCTGCACGCGCTCTACAGCTTCTGCCTGCCGCTGCGCCGCTC	+
fa1_cds_18_000050986726_000050986981	chr18	50,986,726	50,986,981	cds	Scalopus aquaticus	Scalopus_aquaticus	GCA_004024925.1	71,119	Talpidae	mammals	1	zoonomia_cactus	ScaAqu_scaffold_9382	30,086	30,341	-	113,615	30,213	30,214	1	1	CTGTTTCTCCTTGTTTGGCCAAAGTAACTGGTTTGTACCTCTGACTGAAATGAGTCAGAACCAGCCTCTTTGCTTGGCACAACTTTGCAAATGCTGCAGCCATCTGTGGGGTGCTGTGGCCGTGCTCCTTTGCTTTGTCCATCTGTGTGTCATCCAAGGTTGCCTCGTGGATCAACAGGTCTGCTTCGAAGCACAGCTTCACTCCTCCATCACCCACGATCCCGGAACAGTCACCCAAAATGCAGATTTTTCTTC	-
fa1_cds_21_000039660795_000039661050	chr21	39,660,795	39,661,050	cds	Dinomys branickii	Dinomys_branickii	GCA_004027595.1	108,858	Dinomyidae	mammals	1	zoonomia_cactus	DinBra_scaffold_27313	18,193	18,448	-	55,171	18,320	18,321	1	1	TGGATGTTTATAAACATATCTGTGTCTGTCTTCATCACAAAGGCCACCTGAGGACAAAAGCGGTGGACCCACTCCATGCCCATCATGGTCTTCAGGGTCAGATTGAAATAGACGTCCTTGAAGTCCTTCTGGATGATGTCCCTGTGCTCCTGGCTCTCCTGGGTCACCACCGTCATCTCATCCTTGCTGGCCGTGGTCCCCAGGAGGAAGAAAGTTCTTACCCATTGCCCTCTCACCTCCTGCTCTCGACCCCAC	-
fa1_cds_1_000237784166_000237784421	chr1	237,784,166	237,784,421	cds	Lycaon pictus	Lycaon_pictus	GCA_001887905.1	9,622	Canidae	mammals	1	zoonomia_cactus	CM007568.1	2,407,492	2,407,747	-	88,276,357	2,407,619	2,407,620	1	1	TCAGTGAGTCCAGCCGCACCCAGTGGGAGAAGCCCCAGGTCAAGGAGTCCAAACGGCAGTTCATATTTGACGTTGTCAAtgaagggggagaaaaggagaagatggAACTTTTTGTGAACTTCTGTGAGGACACCATATTTGAAATGCAGTTGGCGGCACAGATCTCAGAGTCGGATTTGAATGAGAGGTCAGTGAGTAAggaggagagtgagaaggagaagcctgAAGAGCAAGGGCCCAGGATGGGTTTCTTTT	+
fa1_cds_1_000197188238_000197188493	chr1	197,188,238	197,188,493	cds	Cuniculus paca	Cuniculus_paca	GCA_004365215.1	108,852	Cuniculidae	mammals	1	zoonomia_cactus	CunPac_flattened_line_90531	8,902	9,157	+	11,651	9,029	9,030	1	1	ACATAGTAATCAGTAATTGTCACAACTGCTCTAAGGAAGAGTGTCTTGCTTACCCAGATGGAACTTTTCCTGATGCTTTAACCGTGCAAACCGTGACTTGAAATGTTCTTCACAATAGGTACATTTAAAAGGTTTATCTTGAGAATGCAGAATCATATGTTCTTCCAAGTGTGGTCTTCGAGTAAAAGATTTCTTACAAATCTAAATAAAAATGCATATAAAATAAAGAGAACTAGAATTAAAAATTAAAACATG	+
fa1_cds_20_000063203418_000063203673	chr20	63,203,418	63,203,673	cds	Giraffa tippelskirchi	Giraffa_tippelskirchi	GCA_001651235.1	439,328	Giraffidae	mammals	1	zoonomia_cactus	LVKQ01S004871.1	7,516	7,771	+	104,705	7,643	7,644	1	1	AGGGTATCACCATGAAAGCCTGTCTGTCCGTCCACAATCGTGCCACCCAAGGAGCTCGGCGGGTAGGTGTAGCTGTTCCCGTAGGCTGAACTCTGAGCCTGCTGACCCTGAGACCCACTTGTCCCCCAGGCCGAAAAGGCAGGGTTTTCGGGGAAGAAATTAAACCTGTGCTGGTAGATGTTGCTCCCCAGTCCCCCAGGCTGCCCGAAAACAGCATCATGCACAAAGTGATGGTCTCCGTTACTGAGCTGTCCG	+
fa1_cds_14_000072981714_000072981969	chr14	72,981,714	72,981,969	cds	Gallus gallus	galGal4	Gallus_gallus-4.0/galGal4	9,031	Phasianidae	birds	2	ucsc_multiz100way	chr5	25,732,870	25,733,125	-	59,580,361	25,732,997	25,732,998	1	1	AAGAATATAAAGTTGCTATGACCAGAGCAGCGCTATCTTCTAGAAGAACGAGGGTGCCTTTGTCATCCACTTACCCACAGCTGAGACACACAGAGGAACATGTGAAATATTcatctggaaagaaagagcTATGAGCCATCTGGTCATCAGGGATTTCCCCACTAAACCGGTCACTTAGGGCCTATGAAACAGAGAAGAACGGATGAAATTGGAATGGACTGAGAGCATTACAAACATTTTACAAAATTTTCACCC	+
fa1_cds_3_000043080311_000043080566	chr3	43,080,311	43,080,566	cds	Myotis lucifugus	Myotis_lucifugus	GCF_000147115.1	59,463	Vespertilionidae	mammals	1	zoonomia_cactus	GL430175.1	313,091	313,346	-	901,458	313,218	313,219	1	1	TCCTGGTCTTCAGTCGCACCCAGAACAGACTCATCCTGAACgaggcagagctgctgctggcgctggcccagGAGTTCCAGATGAAGACGGTGACGGTGTCCCTGGAGGACCACGCCTTTGCAGACATCGTGGGGCTGGTCAGCAACGCCTCCATGCTGGTCAGCATGCACGGGGCCCAGCTGGTCACGGCCCTCTTCCTGCCCCGGGGGGCCACCGTGGTCGAGCTCTTCCCGTACGCCGTCAATCCTGACCACT	-
fa1_cds_3_000184239361_000184239616	chr3	184,239,361	184,239,616	cds	Nesogale talazaci	Microgale_talazaci	GCA_004026705.1	2,583,312	Tenrecidae	mammals	1	zoonomia_cactus	MicTal_scaffold_41944	23,019	23,274	+	39,728	23,146	23,147	1	1	CCAGGGTGAACAGCAGTGCAGCTCCTGGCTCACCTGAATCGTCCAGGCCCTGTCCCAGCTGCTGTCCTGGCTCAGAGCCTGGCCCATCTGCTGCCGAACCCAGAGTGGAGTGCTGGTGGTGGACAAGGGCTGCATTGGTCCAGCCTGGGGGCGACGAAAGGCTTCGGCCAGCCAGAACAGCTCGGCGCTGACAGCCCAGCACCTCGGCACTCAAGGCTCCAGCCTGCAGACAGAAGTCGGGGCCACTGGTCAAGG	-
fa1_cds_15_000040363604_000040363859	chr15	40,363,604	40,363,859	cds	Aotus nancymaae	Aotus_nancymaae	GCA_000952055.2	37,293	Aotidae	mammals	1	zoonomia_cactus	KZ207725.1	820,130	820,385	+	3,863,790	820,257	820,258	1	1	GCAGAGAGCTGCCCGATCCCCAAGTCCTGGCAGGGAACTGCCCCCCGGGTATTCCTGCAGTGCCCGGGGATAGGGGAAGTGGGCAGGGGCCGAGGGGCTGGATGGACGCACAGGCTGGAGGGTGGAAGTTGTTGGTGGGGGTCCCGAAGAGCTGGAAGGGTCCTCCTGGGGGCAGCTGTGGAGGGAGCAGCTTCTCTCTGGGCTTGCCTCAGGGGCCACAGCCTTGGTCTGGGTGCTAGGAAGAGAGAAGACAGG	-
fa1_cds_3_000049014417_000049014672	chr3	49,014,417	49,014,672	cds	Lyroderma lyra	Megaderma_lyra	GCA_004026885.1	3,371,112	Megadermatidae	mammals	1	zoonomia_cactus	MegLyr_scaffold_3088	61,867	62,122	+	255,711	61,994	61,995	1	1	TGCAGCTCTTGGCTGAAACCTTCCACCACAAGCGGTGTGTTCTCAAGGTCCATTCGTTCACACATGAGGCACCCAACCAGCGGCGGTGAGAGGGGCTGCGTGATGTACCTGAGTGGCCACGTGGGGGTTCTTGTTGCTTTCTTCTCCCTGACTGTGACTGACCCAGCTGCCCTTTCCTGGCTCCCAGGAGACTGTTTCTGTGCAGTGCAGCCACTGATGGCAGCTTGGCCTTCTGGGACCTCACCACTGTGCTGG	+
fa1_cds_2_000159941759_000159942014	chr2	159,941,759	159,942,014	cds	Mirounga angustirostris	Mirounga_angustirostris	GCA_004023865.1	9,716	Phocidae	mammals	1	zoonomia_cactus	MirAng_flattened_line_28911	45,387	45,642	+	52,047	45,514	45,515	1	1	TCCTTTCTGCATCTTTTTTCAGGACCAAGTCACAGTATTGTACCTCTTGCAGTAGCGTTGACACTGACAGGAATTCTGGCACTTTTCACACTTTCCTTCTGCATATACAAGCACAACAGAGGTATCTTCAGGAGACTTGCACAGTTTAGGAATCCTTACTACCCTACAGCCAACTTCAGTACGGTACATTTGGAAGAAAATATTCTCATTTGTGATCTTGAGAAGAATGACCAGTAACAATGAATTCAGAGAACA	-
fa1_cds_8_000119568086_000119568341	chr8	119,568,086	119,568,341	cds	Mus musculus	Mus_musculus	GCF_000001635.26	10,090	Muridae	mammals	1	zoonomia_cactus	chr15	54,847,160	54,847,415	+	104,043,685	54,847,287	54,847,288	1	1	AAATCAGCACGGGGGTAAAAAAGGTAAGTGgcgaatttaaaatatttatcttctaAGAAACAGTTTATTGGGTAAATAGCGTACTTACGTTTGAAGGCAGGGTACATTGGAACCATGTTGGTTACAAGGAATGCATCATATTTCGCTTCTGGGGAAGAGCTCAGATCTAAACATCAGGTGGGAGAGCAAACTGAGTCATTGCTTACCAATCTCAACATGAACAGGAAACTCAGTGTTTTAGGCCAACCCAAAGAG	+
fa1_cds_13_000026214958_000026215213	chr13	26,214,958	26,215,213	cds	Hystrix cristata	Hystrix_cristata	GCA_004026905.1	10,137	Hystricidae	mammals	1	zoonomia_cactus	HysCri_scaffold_7825	63,911	64,166	-	116,098	64,038	64,039	1	1	CTGAAGGTAGACCGTAATCTTATTGGCTCTAATCTTTGGTTTGTATTCCTCACTGTAACATTAGTTCTAGCCCCATTTTCCCAAATATGCGCTGCTCCAAATCTCTGCCCCTCCCTTTGCCTGAGTTCGCTACCACCTGACTGTTCTGTTTGGTTACTGGAGTTACTGAATGAAGCACTAGTTCTAGGAACACCAACTGCTCTGCCAATTCTATTTCTTAACCTTCCCAGTGTTGAGAGCGATACATCAACTGAA	+
fa1_cds_12_000056101764_000056102019	chr12	56,101,764	56,102,019	cds	Nesogale talazaci	Microgale_talazaci	GCA_004026705.1	2,583,312	Tenrecidae	mammals	1	zoonomia_cactus	MicTal_scaffold_85669	12,703	12,958	+	14,017	12,830	12,831	1	1	CCCATCGTGCCCACCGCTGGCACGACGCCAGATGAAGACTATGAGTACATGAACCGGCGCCGGGGCGGAGGAGACCCCGGGGGGGATTATGCCTCCATGGGTGCCTGCTCGGCCGCGGAGCAAGGCTATGAAGAGATGAGCGCTTTTCGGGGGCCTGGGAGCCACGCTCCCCACGTCCACTACACCCGTCTCAAGACGCTGCGGAGCTTAGAAGCCACCGACTCGGCCTTTGACAACCCTGATTACTGGCACAGC	+
fa1_cds_1_000200873529_000200873784	chr1	200,873,529	200,873,784	cds	Trichechus manatus	Trichechus_manatus	GCF_000243295.1	9,778	Trichechidae	mammals	1	zoonomia_cactus	JH594641.1	15,537,203	15,537,458	-	20,596,549	15,537,330	15,537,331	1	1	GCGGTGGCGCTCCTGGCCGGCCTGCCCGCCCTGGCCTACCGCGAGCTGCAGCCGCTCCCCGGGGGCCAGGGCAGCCAGTGCGGAGAGGAGCCCTCCGACGCCTTCCAGGGCCTCagcttgctgctgctgctgctgacctTCGTGCTGCCCCTGGTTGTCACCCTCTTCTGCTACTGCCGCATCTCGCGCCGCCTGCGCAGGCCGCCGCACCTGGGCCGGGCTCGAAGGAACTCGCTGCGCATCATCTTCGCCATC	+
fa1_cds_2_000027440712_000027440967	chr2	27,440,712	27,440,967	cds	Galeopterus variegatus	Galeopterus_variegatus	GCA_004027255.1	482,537	Cynocephalidae	mammals	1	zoonomia_cactus	GalVar_scaffold_19749	11,195	11,450	+	63,183	11,322	11,323	1	1	AAGAGTGAGAAGGCAGGCTTCCTTGAGGAAGCAGGGGTGGATGTCCTGAGGCATTTGCAGAGCCCATGTGACCTGTTTTCATCTCCCTCCAGGAATGGGATCTACCCTCTGACAGCCTTTGGGCTGCCTCGGCCCCAGCAGCCACAGCAGGAGGAGGTGACGTCACCCGTTGTGCCCCCTTCTGTCAAGACTCCAACACCTGAACCAGCTGAGGTGGAGACCCGCAAGGTGGGAGCTGTGTGGGTGTGGAATGTC	+
fa1_cds_17_000060463938_000060464193	chr17	60,463,938	60,464,193	cds	Chinchilla lanigera	Chinchilla_lanigera	GCF_000276665.1	34,839	Chinchillidae	mammals	1	zoonomia_cactus	JH721911.1	1,751,586	1,751,841	+	18,100,965	1,751,713	1,751,714	1	1	atatagtatatattaacTAGGTTACAAGTTTAATGCCTGGTAAGTTCCGCGGTTTGCTTAATAATTTTAACAGTGTACTTACCTTAGAAGCTTGCCTTAGAACATCCACCACAACTTTAACCGGTAAGCCTGCTGTAATTTCTTTCATTGCCTCAATGCACCATTTGTATgcctaaaataaatttaagaaaaaacaaatggttATAAATCAAATTGACAGCACTGACAAAATGAATGAGAATTTCTCACAAATGT	+
fa1_cds_X_000037809501_000037809756	chrX	37,809,501	37,809,756	cds	Lepilemur ruficaudatus	Lepilemur_ruficaudatus	GCA_963574885.1	78,866	Lepilemuridae	mammals	1	zoonomia_cactus	k141_732808	22,281	22,536	+	80,474	22,408	22,409	1	1	GATTGGGAGCTGCTGCTTTAGGCAAATCGCAAGCCTCAAGAACACCATGGTGGGGACCTCCTTACTTAGGGTGTTGACTCGCAATTGTCTTGAACTCATTATCCCAGTTGGGCCGGCCATACAAAGTCTTTTGTTTCAGGCCTGTGATCACGTCTTTCTCCTCGTCATGGTGCACAGCAAAGTGATTGGCCTGTAGGAAAGGACATGAATTCAGAAAAAGGAGACATGCTGTAAAAGCACATGCACATGTATTTA	-
fa1_cds_3_000112340815_000112341070	chr3	112,340,815	112,341,070	cds	Sus scrofa	Sus_scrofa	GCF_000003025.5	9,823	Suidae	mammals	1	zoonomia_cactus	CM000824.4	157,190,042	157,190,297	-	218,635,234	157,190,169	157,190,170	1	1	ATAGCAAATGAACACACAAGAGTGGCCAGAGGTTTCCACTCCAGAAACTGTTCCTGGATTCCAAGCAGGGGAATTGAATATCTTTACCTTGTGCCCTGCACAGCATCCCTGCTGCCATGAACCAAATCAGTTGGAAGGTAGAGAGATGGCAGAAGAAGCTCCTGAACACCTGAAGACAGAAAGCAAAGTACAGAAATGGGCGTTTGGAAAAAGCTGAGGAAGCTTCAGTCTAATTGCTCTTTCAGGGATTGCAGC	-
fa1_cds_21_000026943336_000026943591	chr21	26,943,336	26,943,591	cds	Chrysochloris asiatica	Chrysochloris_asiatica	GCA_004027935.1	185,453	Chrysochloridae	mammals	1	zoonomia_cactus	ChrAsi_scaffold_187653	328	583	-	10,330	455	456	1	1	AATGCAAAATCACCCATTATTTGCACATCCTATTCTCTCCTCAGGACATCTACTTGGCCTCTCCCATGATGATTCCAAATTCTGTGAAGAGAACTTTGGATCCACAGAAGATAAACGCTTAATGTCTTCCATCCTAACCAGCATTGATGCTTCCAAACCCTGGTCCAAATGCACGTCAGCCACCATCACAGAATTCCTGGATGATGGCCATGGTATGTATCATTAAGAACAACAGAAACTCACAAACAAACCTAG	-
fa1_cds_3_000183981673_000183981928	chr3	183,981,673	183,981,928	cds	Odobenus rosmarus	Odobenus_rosmarus	GCF_000321225.1	9,707	Odobenidae	mammals	1	zoonomia_cactus	KB229185.1	1,663,019	1,663,274	-	3,134,255	1,663,146	1,663,147	1	1	AGTTCTTAAATTTGAATAAGCCCTGACTTGGCATGACATCGCTTTTCCTTTCAGATGTTTGTATCACGGATCACTGCATATTTCAGGAGAAAATGTGTGACCACCACAGATGAACGTGTCCAGAAGATGAATGAAGTCCTCacttatattaaatttattaaaatgtatgccTGGGTCAAAGCATTTTCTCAAATTGTTCAAAGTGAGTTTACAGATTTCATACGTGCATGTGGTATAAGGTCCTTGCTTCCTGAG	-
fa1_cds_1_000039451004_000039451259	chr1	39,451,004	39,451,259	cds	Dasyprocta punctata	Dasyprocta_punctata	GCA_004363535.1	34,846	Dasyproctidae	mammals	1	zoonomia_cactus	DasPun_flattened_line_7909	61,245	61,500	+	106,897	61,372	61,373	1	1	aaaaaaaAGAATTCCTAAAAATGTTGGAGTTTCTGTTCTTTTCTTAGGCAGCATAAGTTGGAGGAAGCACTACTGTTTTCAGGCCAGTTCATGGACGCATTGCAAGCATTGGTTGACTGGTTGTACAAGGTCGAGCCACAGCTGGCAGAGGACCAACCTGTGCATGGGGACCTTGACCTCGTCATGAACCTCATGGATGCCCACAAGGTGAGAAGTGACATTTAAGCTTCGTGGAAGGCAGCGCCATCGAATCAT	+
fa1_cds_6_000073466181_000073466436	chr6	73,466,181	73,466,436	cds	Ctenodactylus gundi	Ctenodactylus_gundi	GCA_004027205.1	10,166	Ctenodactylidae	mammals	1	zoonomia_cactus	CteGun_scaffold_4648	284,344	284,599	-	294,915	284,471	284,472	1	1	CTTTCCTGTCCTCGTGCTCTATTCTTACCTGCATGTTTTGTTTATAGAGCTTCCTGTCAATCTGGGCTCTCAGTCCCCACACAGCGGGTCCCTTACGCCGGTTTAATACTTTGTAATGTACACCAGAATGGTCACAGATGCGAGCACACAGGCCATCCAGGGCATCCACTTCCCTCATTAAATGTCCCTTCCCAATGCCACCAAAGGAAGGATTACAGGACATCTGACCTAGAGAGAAAAGACACACATATATGA	-
fa1_cds_1_000094030930_000094031185	chr1	94,030,930	94,031,185	cds	Tapirus indicus	Tapirus_indicus	GCA_004024905.1	9,802	Tapiridae	mammals	1	zoonomia_cactus	TapInd_scaffold_5397	172,799	173,054	-	264,050	172,926	172,927	1	1	TGTATGTATGCATCTTTAACACACCGCACACCACAGCCCACGTTGCCATGTTTATTTTCCCACAGATTGTACTCCCGGCCACTTTTGTGTTTTTGGCTCTGATGCTTTCCATCATCATCCCTCCTTTTGGTGAATATCCCACTTTGACCCTTCACCCCTGGATGTATGGGCAGCAGTACACTTTCTTCAGGTGCGTAGACTCATTCCCAGAGGTCATCATTCACCTCCGTGGGTTGTGGGGCTCTCGGGTCACGT	-
fa1_cds_19_000035359126_000035359381	chr19	35,359,126	35,359,381	cds	Xenopus tropicalis	xenTro7	JGI_7.0/xenTro7	8,364	Pipidae	amphibians	4	ucsc_multiz100way	KB021657	119,950,141	119,950,396	+	124,127,367	119,950,268	119,950,269	1	1	GTTTTATTCATGTTGGCAGGTATAAAATGCTCCACAATGTAGACAACGCTGCAATGCATGGTCCCAAGGATCCAGATGACGACACTTCCCAGTACTGAATACACTGGATTTTTCAGAAGCTTGTATTTGATAGGATACGCCACGGCCAGGTACCTCTCTACGCTTATAGCCATGAGGAAAAGGGAGGTAATGTAGATGCTGCTGAAATACATAAAAAACGACAAGGGACAGAACACATAAGGCATAAACCAATCC	-
fa1_cds_13_000077273442_000077273697	chr13	77,273,442	77,273,697	cds	Geosciurus inauris	Xerus_inauris	GCA_004024805.1	3,371,099	Sciuridae	mammals	1	zoonomia_cactus	XerIna_scaffold_8046	32,011	32,266	-	132,674	32,138	32,139	1	1	GTAATTGAATCCAATTATTTTATCCACAGAGTCTCTCTTCCAGCTCCTTTTGGAAATCACTGTTCGGAGTACTGGGATGAATGACAGCACAGGACAGTCCCTGACAGCACTTTCCTGTGCTTGCCTCTTTAGTCTAGTGGCTTCTTGGGGAGAAACAGGAAGGACACTTCAGGCCATCTCTGCTATCCTCACCAACAATGGTAGTCATGCTTGCCAAACTATTCAGGTATTTCATATTTATAGCTGCTTAGACAT	-
fa1_cds_19_000038386040_000038386295	chr19	38,386,040	38,386,295	cds	Cavia porcellus	Cavia_porcellus	GCF_000151735.1	10,141	Caviidae	mammals	1	zoonomia_cactus	DS562907.1	12,020,400	12,020,655	+	13,222,263	12,020,527	12,020,528	1	1	TCTGGTCCCCACTCGGCGCCCGAGTCCCACACCCGGGCCCTACCGCCGCCCACCTACACCACCTTTCCAGGCTCGAAACCTAAATTCGACTGGGTGAGCACCCCCGAAGGTCCTGAACGCCACTTCCGCTTCAACGGGACTGGCGGAGGCATCGGGGCGCCCCGACGGCGTGCAGCAGCGCTCTCGGGGCCCTGGggctcccccccacccccgcgaGGGCAGAAGCACCCAGCTCCGGGGCCCCGGAGGCCAGCA	-
fa1_cds_9_000128625013_000128625268	chr9	128,625,013	128,625,268	cds	Odocoileus virginianus	Odocoileus_virginianus	GCA_002102435.1	9,874	Cervidae	mammals	1	zoonomia_cactus	KZ104207.1	1,400,993	1,401,248	+	2,814,587	1,401,120	1,401,121	1	1	TGGTCTTCTTGTcttttggtttgttgttgtttttcatttatttcttaaattgagaTGGGGTGGTTGATTACTCTCGCTTGGTTTTCCAGGTGAAAAGGAGAACAGCTTAAAGACAGATGATTATGGTCGAGATCTGTCTTCTGTCCAAACTCTCCTCACCAAACAGGTCAGTGACAGCTATTTGACTGATGATTGGATTTTACTCACATAGTATTCCCTGGGGGGTGAATGATGGTCAGCATGTTTCTTTGACTG	+
fa1_cds_13_000052723926_000052724181	chr13	52,723,926	52,724,181	cds	Mungos mungo	Mungos_mungo	GCA_004023785.1	210,652	Herpestidae	mammals	1	zoonomia_cactus	MunMun_flattened_line_8881	117,431	117,686	-	165,577	117,558	117,559	1	1	GAAAGGACTGTGGATTCAAATGATGCCTACCAGACCTGCCTGCTGTCTAAAGCATGCAGCCAGTACCCACCAGTTCGGAGGAGATGCTCTGTTTGGTCTCGGGGCCCACCTCAGGAACGCGAGCCTTCACCTGTGCTTTGATGTAGCACTTTTCTCCTCCAGCAAAACGGATTCCGGTGATGCCCTAGGAAATAAGAGTTTATCCATCCATCTATCCattcattcatttattcaatgtgttgagtgtctaccgcc	+
fa1_cds_9_000117713520_000117713775	chr9	117,713,520	117,713,775	cds	Papio anubis	Papio_anubis	GCA_000264685.2	9,555	Cercopithecidae	mammals	1	zoonomia_cactus	CM001505.2	17,206,884	17,207,139	-	108,049,171	17,207,011	17,207,012	1	1	GAGAACCTGGAGGGAGGGCAGACACTTATAAGGAAACACATCCAATGAAAAGAAGTTGTTGTGGCTCATATTTAGTACCTGAAGCTTGTTGAGTGTGTCAAATGCTGTTGGAGACAACTGCTCCAGTTGACACTGAGAGAGGTCCAGGAAGGTCAAGTTTTTCAGATCTGTGAAGatatctggaaggaagttttcctGGAAAGAGTTGCCAGCCATTTTTAAGACTTTGAGACTGAGCAAGCCATCGAAGATGCC	-
fa1_cds_22_000026453150_000026453405	chr22	26,453,150	26,453,405	cds	Heterohyrax brucei	Heterohyrax_brucei	GCA_004026845.1	77,598	Procaviidae	mammals	1	zoonomia_cactus	HetBruBak_scaffold_46319	28,943	29,198	-	42,610	29,070	29,071	1	1	GGAATGCCTCCACAGCTGTGTACGCCTGTTGCAACCCTGTCCAAGAAACCTTTTTCCAGCAGCTGGCCTCACCAGCACGTAGCTCGGGCTTCCCTAGTCCCCAGGACAGCGCCTTCAGCCTCTCTGGCAAAGCCAAGCAGAAGCTGCTGAAGCATGGGGTGAACTTGCTGTGAACTGTGAACTGAGCCCTTGGGAGGAAGCTTCTGATCCAGGAGGTGACTGGGAAGTGGGATGCCAGCAGTGCCAGCTCTGCCT	-
fa1_cds_4_000139890616_000139890871	chr4	139,890,616	139,890,871	cds	Moschus moschiferus	Moschus_moschiferus	GCA_004024705.1	68,415	Moschidae	mammals	1	zoonomia_cactus	MosMos_scaffold_2962	91,055	91,310	+	148,652	91,182	91,183	1	1	ATCTTTGCTCTGCAAGATGGTGAAGCTGTCCTCCAGGTCACTGCAACCATTCACAGGAAGTTTAAGTTCTGGGAGTCTCCCATTCTTACTCAGGTCTTCCAGAAGCCCAGGAGTGTGAGTCCCGCTATTCTGCAAGGGCAAAGAAGACTTCAGGTCAAGTTGGTGAAGCGGAGAAGCTGAAGGCAGTGGCATGTTGTTGGGTAAATTGTTGATGGCTTCCATCCCCGTGGGAATGTCCTTTCGTATTCGCTTGCT	+
fa1_cds_16_000068833265_000068833520	chr16	68,833,265	68,833,520	cds	Phocoena phocoena	Phocoena_phocoena	GCA_004363495.1	9,742	Phocoenidae	mammals	1	zoonomia_cactus	PhoPho_flattened_line_2087	118,745	119,000	-	284,198	118,872	118,873	1	1	AATCCTATTGTCTTCCTTCTTTAGAACCTGAAGGCAGCTGATAGTGACCCCACCGCCCCACCCTATGACTCTCTGCTGGTGTTTGATTATGAAGGAAGCGGCTCCGAAGCTGCTAGTCTGAGCTCCCTGAATTCCTCGGAGTCAGACCAAGACCAGGATTATGACTACCTGAACGAATGGGGCAGTCGCTTCAAGAAGCTGGCGGACATGTATGGAGGCGGCGAGGATGACTAGGGGACTCAAGACCGATGGGGA	+
fa1_cds_16_000022347587_000022347842	chr16	22,347,587	22,347,842	cds	Myocastor coypus	Myocastor_coypus	GCA_004027025.1	10,157	Myocastoridae	mammals	1	zoonomia_cactus	MyoCoy_scaffold_57739	16,180	16,435	+	27,178	16,307	16,308	1	1	CTTCCCCTGTCCTCCCCAGACACTTCGTTTACGATCACATCTTTGCGGAGAAGATCGCGTCCCTGCACAGCCAGCAGAGCCCCGAGGAGGAGGAAAATGAGCGCCTGAAGAAGACGGTGACGGTGCTGCAGGTGCAGCTGAGCCTGGAGCGCCAGAAGCGCCTGGCCATGGAGGAGGAGCTCGGGCTGGCGCTGAAGGAGAACCGCGAGCTGGAGCTGCAGCTGAGAGCCGCCGACGCCTGCGGGGCGCGGGCGC	-
fa1_cds_3_000130388687_000130388942	chr3	130,388,687	130,388,942	cds	Orientallactaga bullata	Allactaga_bullata	GCA_004027895.1	1,041,416	Dipodidae	mammals	1	zoonomia_cactus	AllBul_scaffold_43587	26,514	26,769	-	35,261	26,641	26,642	1	1	AGATTCACATTGGTGCAGATGCAACGCAAATCGGTGTTGTTCAGTTCAGTGATTATAATAAGGAAGAGTTCCAGCTTAATAAATACTTCACCCGAGAAGAAATTTCCAGTGCAATAGACAGAATGTCTCTCATCAATAGGAACACTTTGACCGGAAGTGCACTCACCTTTGTCCGTCAGTATTTCAACCCCGCCATGGGGGGTCGCCCTCAAGTCAGAAAGTTCCTCATCCTCCTCACAGATGGAGAAGCCCAGG	+
fa1_cds_2_000214975764_000214976019	chr2	214,975,764	214,976,019	cds	Catagonus wagneri	Catagonus_wagneri	GCA_004024745.1	51,154	Tayassuidae	mammals	1	zoonomia_cactus	CatWag_scaffold_10755	50,419	50,674	-	118,214	50,546	50,547	1	1	ATTAAAGGAAAGAAACTTACTCATAGAAGGCTGTCTGTTCAGAGGTACCATAAAGAGATGGGGAGATCTCGATCTCTGGATAGCTGTTGCTGGAATTCCTCAGGGTGCCAAGGCCCATGGCAGTAGTTACAAAGACAATGGGGAGAATAACCTGAGCTATGAAACCTTTCCAGTTCCTGCGGGTATGGTGGAACCTTTTAATGAGTATAGCCATTATCTTCTTCAGTAACAGTCCAAAACCATCCAGTCTCTCTC	+
fa1_cds_3_000057104247_000057104502	chr3	57,104,247	57,104,502	cds	Otolemur garnettii	Otolemur_garnettii	GCF_000181295.1	30,611	Galagidae	mammals	1	zoonomia_cactus	GL873521.1	27,225,108	27,225,363	-	55,144,334	27,225,235	27,225,236	1	1	AGATTGGTGGGAAGTCTTCAGCTTTGAGGGAGAAGTGTCCTCATGACCTTGTTCCAAGAAGTGAGTTTTTAACattgttctttgcttttttgtagGAGCAAAGTACAGAGACAACCAGCTGCCTTCTTCAAAATGTTCCTCCAGGGGATTACATAATTGAGGTATGTATACCTCATGAAAGCCCTATTATTAATTCTACAGAATAAACCCAGTTCATAGAGAATTCCAACTGTTTGCAACACTAAAATTTCAAGC	-
fa1_cds_17_000004539653_000004539908	chr17	4,539,653	4,539,908	cds	Panthera onca	Panthera_onca	GCA_004023805.1	9,690	Felidae	mammals	1	zoonomia_cactus	PanOnc_flattened_line_22477	30,462	30,717	-	69,065	30,589	30,590	1	1	GCTTTGGGGTCTTGGCGGGGGTGCCGGGGCCTGTGAGGGCAGCGGCGGGGGCCGGGGCCGGCCTCTGCTTCGCCTGGGCCTGGGCGGGCACCGTGGCCTTCCTCCTGTTCCTCCTCTTCTTGCCTGTGCTGGGGGGCTGCTGCTCACCAGCGGCTGCAGGCCTGGCACCCTCCTCTTGCGCGGGACCCTCTGACTTAGGCTTCTTGCGCTTCTTTGTTTCTGGCAAGAATCCTTTTTTCTTCCTCTTCGTGCTGA	+
fa1_cds_6_000069927843_000069928098	chr6	69,927,843	69,928,098	cds	Tragulus javanicus	Tragulus_javanicus	GCA_004024965.1	9,849	Tragulidae	mammals	1	zoonomia_cactus	TraJav_scaffold_3472	65,657	65,912	+	199,810	65,784	65,785	1	1	TACCAAGATAGTATGTCCATGCCACCTTCAGTTTTCACACAGTGCTGCTTTGTTTCCTCCCGCAGGAAGGTATTTCCCAAAGGCTTCCCTGAGGACTTTGCCATAGCTGCCGTGTTTCGGGTGCGAAGGAGCACCAAGAGGGAACGGTGGTTTCTGTGGCAGGTTTTGGACCAGCAGAATATACCACAGGTAAGGAAGGAACCAGAGAGCCGTGCTGATGAATGTCTGTCTTGGAACTGTTGGGCATAAATTTGG	+
fa1_cds_15_000045369296_000045369551	chr15	45,369,296	45,369,551	cds	Tupaia tana	Tupaia_tana	GCA_004365275.1	70,687	Tupaiidae	mammals	1	zoonomia_cactus	TupTan_flattened_line_367745	1,521	1,776	+	3,514	1,648	1,649	1	1	TAGCAGCTTAGTTGTCTTATCTTGCTTACCCGTAGACTCAAAATCAGGAGTTTTATACTTGAATGACCAGTCAACGGGGTCAGGCCTCCTCACGGTCACTCCTTCCATTTTTAAAATATTGCACATTTCTTCGATTTCAGCAACAGCCTTCTTCAAATGATCTTTGGGAAAAAAATGGCCTCCATGCTTCTGGTAAAATGGCCAGTACTTTTCATATGTGTTGGCCTAGAAGCAGAAAAGGAAGATGGAATACTA	+
fa1_cds_6_000118558872_000118559127	chr6	118,558,872	118,559,127	cds	Manis javanica	Manis_javanica	GCF_001685135.1	9,974	Manidae	mammals	1	zoonomia_cactus	JSZB01019582.1	101,367	101,622	+	432,255	101,494	101,495	1	1	TTTAGCTGAGGGTGATAAATTGCAGCACTGGAGACTGTAGCAGAACTTCAGAGAAGCATCACGATGATGCAGATCAACAAGAGACATATTAAGATGAGACAGAAATTGACAAACAGGTTCTGGAGATTTTGACGTGCTTGTTGAGGCATTTCAATGGTTGAAGCTCTTCTTATAGCGGAGCGAGTGAGGTATTGGACTTTCTCCATGATACCAGGAAGACAGGAAGTCTCAAGTTTTAAATGGTCAGGAGAAAGG	-
fa1_cds_1_000089934328_000089934583	chr1	89,934,328	89,934,583	cds	Paradoxurus hermaphroditus	Paradoxurus_hermaphroditus	GCA_004024585.1	71,117	Viverridae	mammals	1	zoonomia_cactus	ParHer_flattened_line_14712	13,636	13,891	-	81,211	13,763	13,764	1	1	CACATGGTCGATCAGTATGACCAGCTCTATTCGAAGCGCTTCGGTGTGTTCCTGTCAGAAGTCAGCGAAAATAAACTTAGGGAGATCAGTTTGAACCACGAGTGGACGTTTGAAAAACTCAGGCAGCACGTGTCCCGCAACGCCCAGGACAAGCAGGAGCTGCATCTGTTCATGCTGTCAGGCGTGCCCGACGCTGTCTTTGACCTCACAGACCTGGATGTGCTCAGACTTGAACTGATTCCGGAAGCTAAGATT	+
fa1_cds_X_000100914704_000100914959	chrX	100,914,704	100,914,959	cds	Lepisosteus oculatus	lepOcu1	LepOcu1/lepOcu1	7,918	Lepisosteidae	ray-finned_fish	6	ucsc_multiz100way	chrLG7	47,738,504	47,738,759	+	50,812,227	47,738,631	47,738,632	1	1	GGTGCTGTGGCGTGGTTTGGAGATTGCCACTCGCGTGACAGTGCTGGTGCTCTTCAGCACGGCGCTGCCCGTCTGGGTCGTGCCCGTGGGGCTGGCCaacctcctcttcctctttttccTGCCCTGGGTGGAGTTCTGGGCGAAGAGGGCGGCGCTGCCGGAGAACGTGGAGAAGAACTTCAGCAAAGTGGGCACCACTGTGGTGCTGTGCCTGGTCACCTTCCTCTACGCCTGCATCAACATGTTCTGCTGGTC	-
fa1_cds_7_000021619033_000021619288	chr7	21,619,033	21,619,288	cds	Tupaia tana	Tupaia_tana	GCA_004365275.1	70,687	Tupaiidae	mammals	1	zoonomia_cactus	TupTan_flattened_line_302828	2,067	2,322	-	4,217	2,194	2,195	1	1	GGGTTCAAGGTCTTCTCCTAGAGTCAGCTTCTATGCACAACATGAGCCTGCTAGAAAAGGCGCTACCTTCTCAGTCCCCAGTTCTTTCATCGCTTTGTCCACGATCCTTCGGACGTCATCTTCCACTCTGTGCAGCTGCAGCGCTAGCAGATCTGCCAAGGTTGTGCCTTCATTTATTGAAAACTTGACCTGATTAGGAAAAAAGAAAATGTGAATTTATATTCTACATAGAGAATGGTTTCTTTTACCAAATGG	-
fa1_cds_7_000044760381_000044760636	chr7	44,760,381	44,760,636	cds	Pseudopodoces humilis	pseHum1	PseHum1.0/pseHum1	181,119	Paridae	birds	2	ucsc_multiz100way	KB221332	43,065	43,320	-	582,800	43,192	43,193	1	1	ATCTCTGTGAAGTGCCCCCCTCACCGGCACCAGGGACACCTACCCGAAGAGGATGGGTGCAGGGGGGCAACGCTGGGCTTCATGTCTGCCAGGAAGGGTGACTTGACATCCTGACCAGGGGACGCATAGGTGGGGATGCCACTGCCTGGCGTCATGGGCGGTGTGGGGTTCCCGGCCAGCGGCGAGCTGGGGTACCCCGGCAGCGACCGGCCCGGCTGTTGAGGCAGCATGCGCCCTCAGCATCCAgccaggcca	-
fa1_cds_2_000043710058_000043710313	chr2	43,710,058	43,710,313	cds	Zalophus californianus	Zalophus_californianus	GCA_004024565.1	9,704	Otariidae	mammals	1	zoonomia_cactus	ZalCal_flattened_line_72	436,098	436,353	+	721,236	436,225	436,226	1	1	TAAAGTAATTCACCACCTTTAAGAACAAACCACCTCCTCTTCCAAGTCTTGACTTTACCACTCATTTTTAATAAATAGCCAGATTTTTCCAGTGGTTCCTAATTAAAAAGAAATTTTAAAAATTTAAGTTTCCTTTTGGAGGCTCAAACTAACAAGATTCATCAATAttttgtttctttttttttttttttAAACCTGATTCAGTGTTTACATTTTTCCCGTTATCACTGGATGATGAGCAAGTTTTAGGGAGCT	-
fa1_cds_16_000001347846_000001348101	chr16	1,347,846	1,348,101	cds	Balaenoptera acutorostrata	Balaenoptera_acutorostrata	GCF_000493695.1	9,767	Balaenopteridae	mammals	1	zoonomia_cactus	KI537749.1	6,431,176	6,431,431	-	19,862,793	6,431,303	6,431,304	1	1	gagctgggggcgggggaggcgggTGGTGGTCACCTGGAACCCTGCTCCTGGCTCCTGacgggcagggcagggagggacacTCACAAGTAGAAGAGCTCGTCGTACACGGGGTGCAGCGTTCGGCTCTTGACCTGGGTCCTCTGACTGCGGACCAGAGGGAAAAGGTGCGGCGGGCCCAGCTCCACGATCACAAAGGGGTCGCTCAGGCCTAGGGACACGGCTGTGAGCGGAccacgccgccgtccccaccagccc	-
fa1_cds_19_000000618409_000000618664	chr19	618,409	618,664	cds	Lycaon pictus	Lycaon_pictus	GCA_001887905.1	9,622	Canidae	mammals	1	zoonomia_cactus	CM007585.1	57,918,268	57,918,523	-	58,133,239	57,918,395	57,918,396	1	1	CAGCCAGGGGGCGGCGAGCCTGGCCGAGGGACTGCCCCAGGTCggccccccaggcccctgagCGTCCTGTGTCCCCAGGAAGCCTAACACGCTGAAGCAGAAGAACGGCTTCCCCCCGAACTTCATCCACTCGCTGGACTCCTCGCACATGATGCTCACAGCCCTGCACTGCTACAGGTGGGCCCTGAGTCTGGCGGGCCTCGCAGGCCGTGTGCCCCCCGCACCTGTTCGTcagctgctgcgtgcgggccctgg	-
fa1_cds_9_000095972168_000095972423	chr9	95,972,168	95,972,423	cds	Lemur catta	Lemur_catta	GCA_004024665.1	9,447	Lemuridae	mammals	1	zoonomia_cactus	scaffold_15	10,570,341	10,570,596	+	63,862,324	10,570,468	10,570,469	1	1	CAATGTTCACCGGTATTTTTAAAATTTTTCTCATCATCAGATTCAGAAGAAACACTCCATTCTAAAATCTTCTCCCTTTTATAAAAAATACACTTTTCATTTAGATTTAGGATGTTATCTAATTTCTGATGTTTTAAGGTCCCAAGAGAACACTGACTTTTCTGATGACCAGCATCATTGGCTTCTGCTGAAAGGCGCGTGGGCTGCTCATCAGAACTTTCATCATCAGAAGCAGTATTTCCATCATGACCCTCA	-
fa1_cds_17_000030893785_000030894040	chr17	30,893,785	30,894,040	cds	Myocastor coypus	Myocastor_coypus	GCA_004027025.1	10,157	Myocastoridae	mammals	1	zoonomia_cactus	MyoCoy_scaffold_63539	5,686	5,941	+	24,698	5,813	5,814	1	1	TTCCAGTGCTTTTGAAACAGTAGAAGAACATTTAGTAAAGCTGAGAGCTTGTACAGCTGCCTTTAATTCTGCAGAGCCTTGAGAAGTCCACCCATCACCATTCTCCACACTGAACTCATCACAAAGTCCACTTTTAACCTTTCCACTTGTCCAACGAAAGTCATTTTTACCAAGTTCCTTCTGTTCCCTTGTATTAGTTAAGAAGGCATCTAAGAAGGACATGTTATCCATGAACTCAGCGAGAGAACTTAAACA	-
fa1_cds_15_000057965648_000057965903	chr15	57,965,648	57,965,903	cds	Rhinolophus sinicus	Rhinolophus_sinicus	GCA_001888835.1	89,399	Rhinolophidae	mammals	1	zoonomia_cactus	LVEH01000088.1	1,948,955	1,949,210	-	4,186,399	1,949,082	1,949,083	1	1	CTGTCAAAAGTGGAGGTACGGGAGAGCACGGAAGAGCAGTATGCCAGGACATACACGAGACCTGTGGTTCACTTACAATCAGCATCTGCAAAAATAATATTGGGACTTTTCCCTCCAAGTTCCAGAGTTACTCGCTTCAAATTACTTCTTCCAGCTGCTTCTTGGATAAGCTTTCCaacctgaaagaaaggaaatggcgAGAGGTTTTAAGCACTGTGCAGTTGAGATGGTCAAGGGCCAAAGCCAACTCTGGGC	+

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`marin-dna/functional-cds`

Human-anchored 255 bp vertebrate sequences from the Zoonomia 447-mammal Cactus alignment and official version-matched UCSC hg38-to-target liftOver chains. This draft covers the cds region cohort with all species scope and preserves source FASTA/2bit letter case.

Non-human rows project only the central human nucleotide and extract the 255 bp target window centered on its unique mapped locus.

For the 28 non-mammalian targets, the stable ucsc_multiz100way alignment_source value identifies the pinned UCSC assembly cohort; the actual projection operation uses the matching checksum-pinned pairwise liftOver chain.

Anchor eligibility uses the pipeline's pinned phyloP conservation filter. Sequence case is independent of that filter: lowercase bases preserve source repeat masking, uppercase bases preserve source non-repeat-masked sequence, and conservation scores never rewrite emitted characters or case.

Produced by the commit-pinned vertebrate projection pipeline.

Human anchor provenance

Human anchors were constructed on GRCh38 from the complete Ensembl release 115 GTF with all qualifying transcripts; RefSeq and canonical-transcript-only filtering were not used. The enhancer input is ENCODE SCREEN Registry V4 dELS/pELS. The five disjoint classes use the base-priority order cds > utr3 > tss_region > ncrna > enhancer followed by the source-arm window-majority gate. The shared projection catalog requires at least 10% human bases above the pinned phyloP cutoff; this initial training dataset contains only the nested at-least-20% catalog. Projected 10–20% rows are excluded and retained as a separate producer artifact.

Coordinates and sequence semantics

Human source coordinates use GRCh38/hg38 primary chromosomes. All human and target coordinates are 0-based and half-open. Every emitted sequence is exactly 255 bases, preserves its source FASTA/2bit letter case, and is oriented to the human anchor.

The published format is zstd-compressed JSON Lines under data/train/ and data/validation/. The release is validated before upload against a producer-keyed manifest of file sizes and SHA-256 checksums, and the immutable Hub revision exposes each large-file SHA-256 identifier.

license: other preserves the source-specific terms of the public genome assemblies, annotations, and alignments rather than relicensing those inputs.

Splits

train: 46,882,278 rows after removing the validation sample and applying the configured reverse-complement augmentation.
validation: 16,384 original-orientation rows sampled uniformly without replacement with seed 517 before augmentation (4,194,304 tokens including BOS).

The split is row-level and does not stratify by chromosome, species, or human anchor. Different species projections from one human anchor may occur on opposite sides of the split. The reverse complement of a selected validation row is excluded from training.

The selected target manifest contains 135 family-deduplicated projection targets; human reference rows are added separately once per anchor.

Projection backend	Clade	Selected species
ucsc_multiz100way	amphibians	1
ucsc_multiz100way	birds	11
ucsc_multiz100way	jawless_vertebrates	1
ucsc_multiz100way	lobe-finned_fish	1
ucsc_multiz100way	ray-finned_fish	9
ucsc_multiz100way	reptiles	5
zoonomia_cactus	mammals	107

Schema

query_name: String
source_chrom: String
source_start: Int64
source_end: Int64
region_label: String
species: String
alignment_name: String
assembly: String
taxonomy_id: Int64
family: String
clade: String
phylogenetic_rank: Int64
alignment_source: String
t_chrom: String
t_start: Int64
t_end: Int64
t_strand: String
t_src_size: Int64
pre_resize_t_start: Int64
pre_resize_t_end: Int64
fragment_count: Int64
aligned_bases: Int64
sequence: String
augmentation: String

Intended use and limitations

This dataset is intended for genomic language-model research and is not a clinical resource. Assembly quality, alignment gaps, repeat masking, family-deduplicated species selection, human conservation selection, and the center-nucleotide acceptance contract affect the observed sequence distribution. Projecting the center nucleotide does not establish that both 127 bp target flanks are homologous to the full human anchor.

Downloads last month: 278

Number of rows:

9,309,312

Estimated number of rows:

46,832,757

Total file size:

7.44 GB