Dataset Viewer
Auto-converted to Parquet Duplicate
id
stringlengths
36
36
file_name
stringlengths
75
75
file_id
stringlengths
36
36
case_id
stringlengths
36
36
submitter_id
stringlengths
12
12
sample_type
stringclasses
3 values
project_id
stringclasses
1 value
744a6d3d-b666-49aa-8d26-47f34e3d1eb5
94027f46-390c-4dda-ab89-cb1ac0a291cd.rna_seq.augmented_star_gene_counts.tsv
744a6d3d-b666-49aa-8d26-47f34e3d1eb5
878f975b-94fd-4d69-b7e7-1ed3ac2ee438
TCGA-BH-A18H
Primary Tumor
TCGA-BRCA
4ecc1f1a-8ff4-4552-a5e8-7a9652b6d1d5
df45fb41-4511-4dab-b865-fcdfcda0400a.rna_seq.augmented_star_gene_counts.tsv
4ecc1f1a-8ff4-4552-a5e8-7a9652b6d1d5
e4fc0909-f284-4471-866d-d8967b6adcbc
TCGA-E2-A14P
Primary Tumor
TCGA-BRCA
84cff855-d17a-4c09-b432-53893ae69c1e
03d891b3-8faf-4384-94ce-2015f1ca5df0.rna_seq.augmented_star_gene_counts.tsv
84cff855-d17a-4c09-b432-53893ae69c1e
33fe5833-d7a0-43d7-a03d-56985ea448a6
TCGA-GI-A2C8
Solid Tissue Normal
TCGA-BRCA
c2515ef2-5cfc-4cc2-9541-ae072616d361
f8ff90c6-3554-4e19-ae56-18f30f51f9b5.rna_seq.augmented_star_gene_counts.tsv
c2515ef2-5cfc-4cc2-9541-ae072616d361
d0b78f3f-a198-437a-ab8c-204345d3b75d
TCGA-AQ-A0Y5
Primary Tumor
TCGA-BRCA
61647238-a8c4-4156-af15-c32947983cfd
4c6cb929-293d-452e-b7f8-d535b48cf073.rna_seq.augmented_star_gene_counts.tsv
61647238-a8c4-4156-af15-c32947983cfd
566792ae-f853-4a47-856d-f02cdcfcb18a
TCGA-A8-A07I
Primary Tumor
TCGA-BRCA
488399aa-ef3c-42d7-817f-9db11b9902dd
a8e0466b-d106-44b7-b846-c4fb666715f5.rna_seq.augmented_star_gene_counts.tsv
488399aa-ef3c-42d7-817f-9db11b9902dd
b7a4df9a-4e25-4550-9c10-338ca1921c2f
TCGA-E9-A1R4
Primary Tumor
TCGA-BRCA
3d0b3b80-92ae-44dc-89fc-2ead925b81a2
eb44c266-8b8f-4012-ad67-f4ac40698391.rna_seq.augmented_star_gene_counts.tsv
3d0b3b80-92ae-44dc-89fc-2ead925b81a2
b9c6c069-2a2b-4cc7-a398-dc45c132d979
TCGA-AC-A8OP
Primary Tumor
TCGA-BRCA
5cce30f3-99ae-4959-987a-0d280dc2ec44
2dd0b954-db3e-402d-9c06-6160e199dedb.rna_seq.augmented_star_gene_counts.tsv
5cce30f3-99ae-4959-987a-0d280dc2ec44
28e9048a-e540-42de-a1f4-4ef894fccc4c
TCGA-AR-A24Q
Primary Tumor
TCGA-BRCA
5c0579f7-6184-4afa-805c-7aeec4a4c5d2
7c9a2493-5667-48ec-8998-81e13722b4ab.rna_seq.augmented_star_gene_counts.tsv
5c0579f7-6184-4afa-805c-7aeec4a4c5d2
9435447e-d65f-408b-863b-6576b1d652dd
TCGA-AO-A03N
Primary Tumor
TCGA-BRCA
6ce774a5-2636-4a01-ab6e-737f89a4bd4f
28f1b708-bd3c-4ae7-935f-3282f75304a7.rna_seq.augmented_star_gene_counts.tsv
6ce774a5-2636-4a01-ab6e-737f89a4bd4f
752f4773-5a12-4485-a1f6-896e148ddf4d
TCGA-D8-A1JP
Primary Tumor
TCGA-BRCA
fed0a382-2eee-4acc-af00-53a9fdcd2a61
2c1b1cbb-6e9f-4416-8faa-abb31d6b4e0e.rna_seq.augmented_star_gene_counts.tsv
fed0a382-2eee-4acc-af00-53a9fdcd2a61
2b19a6b4-7a17-4452-b4aa-6fc18adc0c3c
TCGA-D8-A1XL
Primary Tumor
TCGA-BRCA
80d565a0-59f6-409e-8850-5d4e2b5b996d
9da89066-8d82-4ace-80e1-889d3c73c8eb.rna_seq.augmented_star_gene_counts.tsv
80d565a0-59f6-409e-8850-5d4e2b5b996d
1dafdd64-527d-4d46-bbdf-7a97774f881b
TCGA-B6-A1KI
Primary Tumor
TCGA-BRCA
263123b0-ec68-47cd-96dd-4f0795503d89
fb49b14e-d40f-4270-98b3-458ce60f2cde.rna_seq.augmented_star_gene_counts.tsv
263123b0-ec68-47cd-96dd-4f0795503d89
1402082d-25c9-4148-8a1e-f58450b706bb
TCGA-B6-A0IP
Primary Tumor
TCGA-BRCA
f205f47f-bd57-42bf-a702-4a17d4391411
3f32cdec-5a60-4147-b313-7c9a9dfefc78.rna_seq.augmented_star_gene_counts.tsv
f205f47f-bd57-42bf-a702-4a17d4391411
5a4b7098-1f6a-49e9-b364-29d6d34f5bd5
TCGA-B6-A0IM
Primary Tumor
TCGA-BRCA
0e0df72c-33c0-4e4f-939c-a4d45a6e1ea3
36125e17-48fd-4eea-874c-ed2e2e218402.rna_seq.augmented_star_gene_counts.tsv
0e0df72c-33c0-4e4f-939c-a4d45a6e1ea3
0045349c-69d9-4306-a403-c9c1fa836644
TCGA-A1-A0SB
Primary Tumor
TCGA-BRCA
111b2865-e7dc-45c9-b206-20b5713714bc
6798cbfe-7aca-4f33-b4fc-162bf579a303.rna_seq.augmented_star_gene_counts.tsv
111b2865-e7dc-45c9-b206-20b5713714bc
d8d7a6c2-6427-4f47-968c-6c3affba4617
TCGA-A8-A08B
Primary Tumor
TCGA-BRCA
9a1c9a5a-7b3f-463b-bc9c-e06107b2aeb7
ecdac97e-eec5-4753-a572-8aff707178e5.rna_seq.augmented_star_gene_counts.tsv
9a1c9a5a-7b3f-463b-bc9c-e06107b2aeb7
c6086936-7544-4da0-8c0c-114166848483
TCGA-AN-A0FD
Primary Tumor
TCGA-BRCA
931442ba-af81-4b68-beca-7285fc44b1df
f2dda955-5a39-43c1-93a2-83953b2b91d1.rna_seq.augmented_star_gene_counts.tsv
931442ba-af81-4b68-beca-7285fc44b1df
427d0648-3f77-4ffc-b52c-89855426d647
TCGA-3C-AALJ
Primary Tumor
TCGA-BRCA
eff9c23b-fc85-403c-8e88-86b4def8ced1
e7c2b898-cd11-42a1-b309-b4de1ab01965.rna_seq.augmented_star_gene_counts.tsv
eff9c23b-fc85-403c-8e88-86b4def8ced1
0cf0d67c-2f7f-42a6-94f3-407d0ec46c88
TCGA-AC-A4ZE
Primary Tumor
TCGA-BRCA
5645320f-820e-45b7-b4cf-ea05085f53e3
bb06ad3a-4d73-4f88-8f3c-954dce2b38ef.rna_seq.augmented_star_gene_counts.tsv
5645320f-820e-45b7-b4cf-ea05085f53e3
aa30ac3d-4216-45dd-a314-1ae192fafcb2
TCGA-AR-A24M
Primary Tumor
TCGA-BRCA
f9432d83-a322-4f5b-9c45-7dad736005a4
c1f95e8e-aaaa-4090-8f64-c619aa543d1b.rna_seq.augmented_star_gene_counts.tsv
f9432d83-a322-4f5b-9c45-7dad736005a4
4aacbc42-5ac5-4339-b9fa-c6e812084837
TCGA-E9-A22A
Primary Tumor
TCGA-BRCA
3d075fc4-5a01-47ce-bef0-a77acf71061d
707fad7d-f284-456a-abfa-17289b40579f.rna_seq.augmented_star_gene_counts.tsv
3d075fc4-5a01-47ce-bef0-a77acf71061d
4a032bad-e726-48f2-8f39-e3acc109cc91
TCGA-BH-A0BZ
Primary Tumor
TCGA-BRCA
f599be9a-0cac-4441-905c-5a6c87e7bc8c
741fb6d6-364f-47a0-a262-f18235c48fc4.rna_seq.augmented_star_gene_counts.tsv
f599be9a-0cac-4441-905c-5a6c87e7bc8c
5d1d00c6-fcae-479e-ae1e-de76efd41d98
TCGA-BH-A0BW
Solid Tissue Normal
TCGA-BRCA
4f54add3-c33d-4bc9-9e1f-c75f52d15f1e
2e4316d2-5fe5-4ee1-9b22-73f4c42b6202.rna_seq.augmented_star_gene_counts.tsv
4f54add3-c33d-4bc9-9e1f-c75f52d15f1e
4aa68586-6331-4795-b40c-859386640df6
TCGA-BH-A1FE
Solid Tissue Normal
TCGA-BRCA
fc0e74d2-ab94-48b1-8e31-808bde7a3fe6
3f3b6a7b-94f0-40a3-9f16-32bab2854678.rna_seq.augmented_star_gene_counts.tsv
fc0e74d2-ab94-48b1-8e31-808bde7a3fe6
5d688049-f271-40ef-813a-d37240ffe21c
TCGA-A8-A07F
Primary Tumor
TCGA-BRCA
c00ad8a9-ed1d-4289-aa62-3e64cb574205
b47b2efb-02e1-4729-95ad-de05fb551bc7.rna_seq.augmented_star_gene_counts.tsv
c00ad8a9-ed1d-4289-aa62-3e64cb574205
d5cab7f5-e4f1-40ee-a0c8-4c8004c1c9a0
TCGA-AN-A0FF
Primary Tumor
TCGA-BRCA
d657ed9a-fd92-493c-ae10-120c8b0c58d7
57730033-1db5-4e48-81ff-b6ee4f3c0ab4.rna_seq.augmented_star_gene_counts.tsv
d657ed9a-fd92-493c-ae10-120c8b0c58d7
e663954c-05a8-479a-a623-400c1eb5efc6
TCGA-BH-A1F5
Primary Tumor
TCGA-BRCA
d5586fdb-d796-4176-84e3-11a72124b41f
f7efa9c4-e7e2-406a-98e5-596f787c810e.rna_seq.augmented_star_gene_counts.tsv
d5586fdb-d796-4176-84e3-11a72124b41f
c7d7a770-23c0-4310-ab48-1f6152dc2849
TCGA-D8-A1Y2
Primary Tumor
TCGA-BRCA
e4f49b9c-faed-4f15-a79c-79664e2c03b6
61a614bb-2249-4611-8aac-1a8e53d4467b.rna_seq.augmented_star_gene_counts.tsv
e4f49b9c-faed-4f15-a79c-79664e2c03b6
ecab16bc-28d5-4c3a-8735-3c785bd047c4
TCGA-BH-A1FB
Solid Tissue Normal
TCGA-BRCA
81801e72-d293-42e0-8871-5468e33b6d89
08ccd8d6-3e9d-4ece-a421-98acaf272569.rna_seq.augmented_star_gene_counts.tsv
81801e72-d293-42e0-8871-5468e33b6d89
fa4e082a-d213-412e-8d91-842a6f4bef12
TCGA-BH-A0B6
Primary Tumor
TCGA-BRCA
56be281f-e85c-4dcb-9d75-cd9ae3430bbe
92e7a9c0-ea88-419e-9afa-e7db5c8967b5.rna_seq.augmented_star_gene_counts.tsv
56be281f-e85c-4dcb-9d75-cd9ae3430bbe
02f5ae33-a563-4ecb-9e33-dfa500a44931
TCGA-A8-A093
Primary Tumor
TCGA-BRCA
50721c97-1a23-405b-b7b3-2955e4c62e5a
00063026-2a67-41de-b105-f80dca277978.rna_seq.augmented_star_gene_counts.tsv
50721c97-1a23-405b-b7b3-2955e4c62e5a
a8b1f6e7-2bcf-460d-b1c6-1792a9801119
TCGA-E9-A1NF
Solid Tissue Normal
TCGA-BRCA
be65c37e-7aa8-466d-a1fe-102e8e25e2e9
35120b68-e618-46a1-9641-1e635f633372.rna_seq.augmented_star_gene_counts.tsv
be65c37e-7aa8-466d-a1fe-102e8e25e2e9
e8f3cc64-5e15-4f4d-b73e-5c9b250a664c
TCGA-AR-A255
Primary Tumor
TCGA-BRCA
f2a4b38d-bfc0-4363-9a58-b5fa2af26ff3
4665ff5e-adb6-4b88-8a42-cb25c4fda0a0.rna_seq.augmented_star_gene_counts.tsv
f2a4b38d-bfc0-4363-9a58-b5fa2af26ff3
a482fc4c-ff1d-46a0-a968-7df06422cc4b
TCGA-B6-A0WX
Primary Tumor
TCGA-BRCA
71ea0cc0-d979-4efd-a670-1e8e8a329aca
0394cdb2-85e8-4cea-b572-4cb4ed779774.rna_seq.augmented_star_gene_counts.tsv
71ea0cc0-d979-4efd-a670-1e8e8a329aca
a381275f-8858-4793-a8a2-0ca9db7274c8
TCGA-EW-A1J2
Primary Tumor
TCGA-BRCA
222b562a-3ef7-4e69-a60d-54aac5104102
e0527b4b-de23-4b9f-8871-13f64f6976cd.rna_seq.augmented_star_gene_counts.tsv
222b562a-3ef7-4e69-a60d-54aac5104102
a9bb8159-32f0-454c-a946-b3286a52b9d5
TCGA-A1-A0SP
Primary Tumor
TCGA-BRCA
2e6baa15-85d7-43b0-8a89-a0dc169ae16a
c62cda08-6134-47c6-8796-9da0788d9717.rna_seq.augmented_star_gene_counts.tsv
2e6baa15-85d7-43b0-8a89-a0dc169ae16a
e37ae674-a107-4eb3-94d8-b86b0035a9f7
TCGA-AC-A3HN
Primary Tumor
TCGA-BRCA
08b0fe4c-ee3c-4510-b75a-6d240cb038cc
e5bcd6f9-680e-4d57-81f3-c8e6b40bb2af.rna_seq.augmented_star_gene_counts.tsv
08b0fe4c-ee3c-4510-b75a-6d240cb038cc
4bf50455-9ab7-4521-a791-089f66d3b877
TCGA-B6-A0RT
Primary Tumor
TCGA-BRCA
dbe79158-b616-4c7b-94d7-5f127b3013ff
2dc9eaca-6dfc-4e7f-a12b-1495986e1ad4.rna_seq.augmented_star_gene_counts.tsv
dbe79158-b616-4c7b-94d7-5f127b3013ff
f947d67f-4aa2-4eb9-977e-21a5ae563613
TCGA-A8-A08P
Primary Tumor
TCGA-BRCA
a436c52a-e63f-4d61-bc60-eb497c196489
ff0feb3e-6d14-4297-ac23-1eb397663ec3.rna_seq.augmented_star_gene_counts.tsv
a436c52a-e63f-4d61-bc60-eb497c196489
a68a3361-48b4-4bd0-999d-b4cc3d43eb4a
TCGA-BH-A0HN
Primary Tumor
TCGA-BRCA
08837ae7-6f4f-4aa1-8722-7c404b66ed75
828c9648-f725-4d7e-ad37-e33692e2c67f.rna_seq.augmented_star_gene_counts.tsv
08837ae7-6f4f-4aa1-8722-7c404b66ed75
30ec8b1f-28c4-4f46-8a1b-a8d51e558c7d
TCGA-BH-A18T
Primary Tumor
TCGA-BRCA
1f9a9190-4157-457e-9794-a9217d2aa2f8
cf4160bb-9ef4-43c1-ac83-f6ca897101ee.rna_seq.augmented_star_gene_counts.tsv
1f9a9190-4157-457e-9794-a9217d2aa2f8
c2b104ee-f914-4e79-9e1b-56bf88157472
TCGA-E2-A14S
Primary Tumor
TCGA-BRCA
c95841fa-ea90-4a12-99aa-5c342af9e0e8
4bd484be-2364-4a9c-841e-b60bee25af79.rna_seq.augmented_star_gene_counts.tsv
c95841fa-ea90-4a12-99aa-5c342af9e0e8
5258294f-ef5b-4091-9183-6bcc545d54b2
TCGA-BH-A209
Solid Tissue Normal
TCGA-BRCA
90cb5f76-ec86-4532-8352-e6622ef24980
01900aab-4c12-4198-b41f-ff638e5abe3b.rna_seq.augmented_star_gene_counts.tsv
90cb5f76-ec86-4532-8352-e6622ef24980
90ff48c3-b14b-4a8b-94a1-98c0bab0d27b
TCGA-W8-A86G
Primary Tumor
TCGA-BRCA
ef227e3c-7a6d-4c43-945f-c1c7b410d50b
dbb2f12c-e200-412a-9023-0126d6d69a52.rna_seq.augmented_star_gene_counts.tsv
ef227e3c-7a6d-4c43-945f-c1c7b410d50b
029ce650-5e5a-4100-8596-cd94300e7ef5
TCGA-E2-A574
Primary Tumor
TCGA-BRCA
2a18db7b-b054-4210-b8cb-a647c26f90c1
5dfb4024-ca51-4296-9fc7-0037b7b1e27b.rna_seq.augmented_star_gene_counts.tsv
2a18db7b-b054-4210-b8cb-a647c26f90c1
dd3bfb26-b534-4917-9c4d-9fe7b6477762
TCGA-E9-A1RI
Solid Tissue Normal
TCGA-BRCA
5599b7dd-7c2a-4037-ad77-11a0b4ddcb54
6cbfdf8b-fd71-4b6a-b360-1573ee5241a1.rna_seq.augmented_star_gene_counts.tsv
5599b7dd-7c2a-4037-ad77-11a0b4ddcb54
bb026999-0aab-4232-96d7-2c93b6c9691d
TCGA-A2-A3KD
Primary Tumor
TCGA-BRCA
2040d4e4-0ecb-4081-9478-9d2707833a1b
10376443-40df-451a-91e5-6be34850558c.rna_seq.augmented_star_gene_counts.tsv
2040d4e4-0ecb-4081-9478-9d2707833a1b
52c35691-efca-42f5-a03e-02c9f872275c
TCGA-C8-A1HK
Primary Tumor
TCGA-BRCA
280141da-fd54-4901-bc15-5d106c56fb23
aad82145-5742-4ef6-9de3-2c57e84642fc.rna_seq.augmented_star_gene_counts.tsv
280141da-fd54-4901-bc15-5d106c56fb23
c710f4ab-fbd9-42ed-95d4-4e6d51207f38
TCGA-BH-A0B4
Primary Tumor
TCGA-BRCA
81f86e31-55db-4483-b6e0-55451ffbd1db
a31cd337-8f1a-451d-9b90-b722590d3105.rna_seq.augmented_star_gene_counts.tsv
81f86e31-55db-4483-b6e0-55451ffbd1db
095c7985-3842-494f-b591-706ad1cd2133
TCGA-AO-A03M
Primary Tumor
TCGA-BRCA
1c74a1ed-8000-4dc0-970f-03831ca5e167
9935bf3a-de25-401c-bf1b-5225a62b24f7.rna_seq.augmented_star_gene_counts.tsv
1c74a1ed-8000-4dc0-970f-03831ca5e167
27dfb9d4-3a2c-44bc-9acf-8f638d3f3004
TCGA-BH-A0GZ
Primary Tumor
TCGA-BRCA
2faa9332-e577-4884-94e4-b895827db8b6
8b5be676-9118-4038-9d54-6b80b14e43dc.rna_seq.augmented_star_gene_counts.tsv
2faa9332-e577-4884-94e4-b895827db8b6
a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814
TCGA-C8-A12Q
Primary Tumor
TCGA-BRCA
d757b1cc-31a6-495a-ae82-c63b031ece49
898f9214-8dab-4b92-9233-70c06c60078c.rna_seq.augmented_star_gene_counts.tsv
d757b1cc-31a6-495a-ae82-c63b031ece49
ad18820b-a804-49c0-ba8a-86c09fa6bce2
TCGA-BH-A1F6
Solid Tissue Normal
TCGA-BRCA
ca6e4602-bcd4-4299-bd31-37f585658b8a
1c3dbd2f-1c07-48cb-a844-0b1b3eb14e0d.rna_seq.augmented_star_gene_counts.tsv
ca6e4602-bcd4-4299-bd31-37f585658b8a
9676e46b-8f29-43cd-ab65-eb6a535cced4
TCGA-EW-A6S9
Primary Tumor
TCGA-BRCA
f2bf29d2-4c33-4810-90e8-88f37ea47bc8
139b1f70-02f6-4f5e-84b3-81d3677b3f8c.rna_seq.augmented_star_gene_counts.tsv
f2bf29d2-4c33-4810-90e8-88f37ea47bc8
6f89509c-f802-482e-b4da-94553aa76fe9
TCGA-AR-A24H
Primary Tumor
TCGA-BRCA
e25bb12b-f88b-41c5-951e-a36d4b94008f
73e13f2d-a557-47f2-85e2-7bb8e3a48ef9.rna_seq.augmented_star_gene_counts.tsv
e25bb12b-f88b-41c5-951e-a36d4b94008f
ca20249f-b7ea-4fd9-9ecb-34f74755ae35
TCGA-XX-A89A
Primary Tumor
TCGA-BRCA
71175258-a00a-4035-8f33-eb48bf04066f
c98940e5-aff4-4eec-9cd7-708584356a5f.rna_seq.augmented_star_gene_counts.tsv
71175258-a00a-4035-8f33-eb48bf04066f
ed2617c3-5d3b-4688-9283-0f8a10e0b10d
TCGA-E9-A5UO
Primary Tumor
TCGA-BRCA
63454d5d-a654-4be0-b812-dd5c98d07ea1
c63e3277-327a-4259-84f2-13d9a2c2d68a.rna_seq.augmented_star_gene_counts.tsv
63454d5d-a654-4be0-b812-dd5c98d07ea1
fa176764-a76f-44c7-b97a-cd6d21e052be
TCGA-E2-A1LB
Primary Tumor
TCGA-BRCA
064215bd-9ec9-4a16-8ea2-9c6604156398
af83a9af-a11f-4c29-a61f-8f0d2b5868c1.rna_seq.augmented_star_gene_counts.tsv
064215bd-9ec9-4a16-8ea2-9c6604156398
0f7ab21b-1fd0-45e0-9a47-17c4691eb84f
TCGA-E2-A15S
Primary Tumor
TCGA-BRCA
fc1ea7f7-814a-43c5-a841-fb0c11734603
10ce58cf-c9ee-4be2-899d-4c20c788effc.rna_seq.augmented_star_gene_counts.tsv
fc1ea7f7-814a-43c5-a841-fb0c11734603
6f0fd68f-ed6a-4c9e-be02-c97ba4950f76
TCGA-GM-A3XG
Primary Tumor
TCGA-BRCA
2abc5233-1389-4efb-ba21-de05251ab25a
b31c9e1c-be79-4264-81a3-40b67f1f0bde.rna_seq.augmented_star_gene_counts.tsv
2abc5233-1389-4efb-ba21-de05251ab25a
074e8b06-3929-4896-9263-3b80ad6a355b
TCGA-AR-A24S
Primary Tumor
TCGA-BRCA
ee447251-5c90-426f-a0c7-bd2041189761
06a03e45-7315-4a8d-9fef-d841a4a8043c.rna_seq.augmented_star_gene_counts.tsv
ee447251-5c90-426f-a0c7-bd2041189761
23f438bd-1dbb-4d46-972f-1e8e74ddbd37
TCGA-Z7-A8R5
Primary Tumor
TCGA-BRCA
ad67e3a9-1751-4e6f-a962-2175f824f96d
68503654-dd77-48f1-abab-aca55258dca4.rna_seq.augmented_star_gene_counts.tsv
ad67e3a9-1751-4e6f-a962-2175f824f96d
59bf0ce4-715a-4017-bccb-c59916e78324
TCGA-A8-A07U
Primary Tumor
TCGA-BRCA
75d5bcb2-3055-4b6a-822c-1aa37a9f1337
b8542fa9-5521-48bc-ae1b-4e12a1744e0d.rna_seq.augmented_star_gene_counts.tsv
75d5bcb2-3055-4b6a-822c-1aa37a9f1337
7032ec9c-e96b-4642-a7b6-d0aee7a3add2
TCGA-A2-A0EV
Primary Tumor
TCGA-BRCA
92fc6274-1d0f-4e1c-a124-9e5135753d99
52df14ea-5feb-481a-855e-0a6176744a73.rna_seq.augmented_star_gene_counts.tsv
92fc6274-1d0f-4e1c-a124-9e5135753d99
7455d832-ad66-40df-85d7-3a7051c4498d
TCGA-A2-A0ER
Primary Tumor
TCGA-BRCA
26415014-f0fe-4b7c-b9dc-2a6f85d47a5e
231b4ae3-8543-47f4-a9f6-0ac26210b26d.rna_seq.augmented_star_gene_counts.tsv
26415014-f0fe-4b7c-b9dc-2a6f85d47a5e
739cb132-51e9-41be-8064-311a13da0d74
TCGA-D8-A1XA
Primary Tumor
TCGA-BRCA
64bfe46f-8152-4c70-b69d-ea412a4dfcff
b25117ce-5a14-4b43-bbfe-513b957464d0.rna_seq.augmented_star_gene_counts.tsv
64bfe46f-8152-4c70-b69d-ea412a4dfcff
99e32c59-aa73-43fa-88c9-399ddadb2c72
TCGA-A2-A0D2
Primary Tumor
TCGA-BRCA
0648c6fc-df6d-450a-a5a0-e5655febbdf1
f532a6be-de3e-420c-960a-23627589e7ad.rna_seq.augmented_star_gene_counts.tsv
0648c6fc-df6d-450a-a5a0-e5655febbdf1
752ad011-79e0-494f-9868-98bf6feb28f8
TCGA-E2-A14N
Primary Tumor
TCGA-BRCA
59980021-265a-4817-b7ea-02908a52cbcb
2973fc8f-d20c-4cf3-b183-2ac32df73ae7.rna_seq.augmented_star_gene_counts.tsv
59980021-265a-4817-b7ea-02908a52cbcb
9ce7ce09-4409-4fa3-9f78-b2b24716f860
TCGA-A2-A04Y
Primary Tumor
TCGA-BRCA
4c9005a5-2cca-4cc3-9a6d-09eb76d780ab
fb9c23f2-8694-41ca-a126-a5a131abeac1.rna_seq.augmented_star_gene_counts.tsv
4c9005a5-2cca-4cc3-9a6d-09eb76d780ab
9ced0c70-c46c-4f98-8f48-840defe4b8b1
TCGA-D8-A1JA
Primary Tumor
TCGA-BRCA
b6bbcd01-c1a3-42b8-afe7-c17b987903b0
a3624554-07c8-41d7-9b6b-f4cbf9de9301.rna_seq.augmented_star_gene_counts.tsv
b6bbcd01-c1a3-42b8-afe7-c17b987903b0
9f3cc92b-fa22-478e-a2e4-6b4c8afb93d6
TCGA-E9-A24A
Primary Tumor
TCGA-BRCA
1a4e1855-911d-4eb4-bc77-547bc3b8e063
ce76e826-0792-4dec-ace7-7efa3bb8db94.rna_seq.augmented_star_gene_counts.tsv
1a4e1855-911d-4eb4-bc77-547bc3b8e063
9ba11ea8-97d3-464a-90a4-ec1151be9088
TCGA-PL-A8LY
Primary Tumor
TCGA-BRCA
cba08218-0a7b-4425-8776-b240fac9b6cf
fd71e0e9-e77a-465b-b118-b1f9665d5797.rna_seq.augmented_star_gene_counts.tsv
cba08218-0a7b-4425-8776-b240fac9b6cf
9c895825-d6f6-4d14-a662-23212200f6e5
TCGA-AR-A5QM
Primary Tumor
TCGA-BRCA
0019c951-16c5-48d0-85c8-58d96b12d330
ba295155-272e-43eb-9d6a-e4c9c392e68b.rna_seq.augmented_star_gene_counts.tsv
0019c951-16c5-48d0-85c8-58d96b12d330
6a186809-3422-41d0-83d2-867145830936
TCGA-D8-A1XO
Primary Tumor
TCGA-BRCA
2e753306-2df6-4666-b1ce-06992d109d02
3a6cc4be-eff8-4725-a416-46ed35316192.rna_seq.augmented_star_gene_counts.tsv
2e753306-2df6-4666-b1ce-06992d109d02
6644fd4e-d2fe-4785-a73c-0f36fcc740e2
TCGA-A1-A0SO
Primary Tumor
TCGA-BRCA
7f2773df-bece-43e0-94ff-46ba7dcf713e
948f1e9e-702b-4f42-a766-fb6b4976b14d.rna_seq.augmented_star_gene_counts.tsv
7f2773df-bece-43e0-94ff-46ba7dcf713e
69054195-9e93-49e5-b820-69b0091cc2d4
TCGA-A8-A06O
Primary Tumor
TCGA-BRCA
bab81011-81b1-4fa4-bda1-fddec99245f5
c07f871d-fea0-401a-b0c5-ec5685c311d7.rna_seq.augmented_star_gene_counts.tsv
bab81011-81b1-4fa4-bda1-fddec99245f5
9ddc014d-9a8b-407b-845f-452a73f08e5e
TCGA-A2-A4S2
Primary Tumor
TCGA-BRCA
9bb406c8-2b8e-410e-8bca-02a778312056
4152a167-7b5f-4415-81f8-b22732cc6ef7.rna_seq.augmented_star_gene_counts.tsv
9bb406c8-2b8e-410e-8bca-02a778312056
6956473b-92e5-4069-a26b-b48e280e76f2
TCGA-B6-A0RU
Primary Tumor
TCGA-BRCA
23ac8b84-f000-45ea-ad35-a46323d3670a
df6189e5-bd61-4be2-9d31-efef56cb4739.rna_seq.augmented_star_gene_counts.tsv
23ac8b84-f000-45ea-ad35-a46323d3670a
6cb6f179-defd-4661-af0a-c353b74c0c49
TCGA-A7-A26J
Primary Tumor
TCGA-BRCA
a853d2bb-b696-493a-9451-59dcedde5f20
d078b2ae-790a-4220-98a0-18d311996ed5.rna_seq.augmented_star_gene_counts.tsv
a853d2bb-b696-493a-9451-59dcedde5f20
67c73260-a242-4bba-87c5-d2302556dff7
TCGA-AC-A3TM
Primary Tumor
TCGA-BRCA
385ddd6f-c126-4c4f-acde-1ef2d74d3639
616b6b60-8c4a-4d85-9a24-f47df6ad497e.rna_seq.augmented_star_gene_counts.tsv
385ddd6f-c126-4c4f-acde-1ef2d74d3639
0a017f15-1c6b-45e7-8d55-e0a71df1b2e8
TCGA-A8-A08F
Primary Tumor
TCGA-BRCA
9dcf3c95-cc67-4a83-a2c8-12cbce82b9c4
4ab26a32-f816-4aee-9130-12a0b3604db0.rna_seq.augmented_star_gene_counts.tsv
9dcf3c95-cc67-4a83-a2c8-12cbce82b9c4
6f959c92-b79f-4f84-9ee5-d07d3212d52d
TCGA-A8-A09K
Primary Tumor
TCGA-BRCA
7acdca8d-6231-4077-b7ac-eec857c43092
17efe3f1-a97a-4e26-b28a-98702fd3c42b.rna_seq.augmented_star_gene_counts.tsv
7acdca8d-6231-4077-b7ac-eec857c43092
d093173f-08ab-4138-bf3c-399c45a6e163
TCGA-AR-A2LR
Primary Tumor
TCGA-BRCA
db921dd3-3d39-4b42-b2ff-dbe0f6c9f093
93f26994-d3de-4c8a-bfde-86af8d85b01a.rna_seq.augmented_star_gene_counts.tsv
db921dd3-3d39-4b42-b2ff-dbe0f6c9f093
33fe5833-d7a0-43d7-a03d-56985ea448a6
TCGA-GI-A2C8
Primary Tumor
TCGA-BRCA
c6ec90b5-d323-4a55-b48a-c3acf38557ba
92e64d91-88d8-4b1f-ab56-b593748b9f19.rna_seq.augmented_star_gene_counts.tsv
c6ec90b5-d323-4a55-b48a-c3acf38557ba
1502c7d7-1535-4e56-9f34-30623acd50d5
TCGA-B6-A1KC
Primary Tumor
TCGA-BRCA
3eadce70-ba3d-4806-b112-6ac83bc89dc4
a3595c7e-948b-4d93-a623-477d7af84e15.rna_seq.augmented_star_gene_counts.tsv
3eadce70-ba3d-4806-b112-6ac83bc89dc4
7875018b-91dc-4ab1-83b0-ee3883e2816e
TCGA-BH-A0C0
Primary Tumor
TCGA-BRCA
ed0aae7b-f815-4dc8-a98f-5844602cbaea
b773c30d-f37b-4aee-8330-a159d42d3019.rna_seq.augmented_star_gene_counts.tsv
ed0aae7b-f815-4dc8-a98f-5844602cbaea
8cf8b620-7ab6-4b6e-84bc-ff5a83f381fa
TCGA-A8-A07G
Primary Tumor
TCGA-BRCA
58037e4a-a82f-42a9-84a1-715966343bd4
2b67c3b5-330e-41e4-95cf-028d37fe91e1.rna_seq.augmented_star_gene_counts.tsv
58037e4a-a82f-42a9-84a1-715966343bd4
8631969d-4ac6-4fe1-9db3-d47db604494a
TCGA-E9-A1R2
Primary Tumor
TCGA-BRCA
be002264-f534-49b3-90d1-fd5a3f622fb2
f0024165-4df2-454e-a0cb-17720455c0c9.rna_seq.augmented_star_gene_counts.tsv
be002264-f534-49b3-90d1-fd5a3f622fb2
1c40b84e-a0e3-429f-a48c-21566cf881c0
TCGA-D8-A143
Primary Tumor
TCGA-BRCA
acfa0ea5-3345-4734-9917-d3acc10d1a15
9d515fd5-009a-4c32-95e7-042909d70b9f.rna_seq.augmented_star_gene_counts.tsv
acfa0ea5-3345-4734-9917-d3acc10d1a15
9ddc3e7b-8b54-4a83-8335-8053940f56c1
TCGA-BH-A18L
Solid Tissue Normal
TCGA-BRCA
836f61df-2b3d-4e1f-abcc-37734091b746
815b70e5-858d-416d-94aa-6749960883ce.rna_seq.augmented_star_gene_counts.tsv
836f61df-2b3d-4e1f-abcc-37734091b746
9ddc3e7b-8b54-4a83-8335-8053940f56c1
TCGA-BH-A18L
Primary Tumor
TCGA-BRCA
b0cc3c29-89fe-4010-8f56-137f2b897bce
f7c6320e-0c39-4b92-9a25-fd4e03b70362.rna_seq.augmented_star_gene_counts.tsv
b0cc3c29-89fe-4010-8f56-137f2b897bce
3558dec7-eae3-4a41-a217-266c6a4535fb
TCGA-E2-A1LI
Primary Tumor
TCGA-BRCA
987603ab-513b-44d6-8b8e-344fd299a81a
204cf188-2162-43ac-bad4-8304622f3090.rna_seq.augmented_star_gene_counts.tsv
987603ab-513b-44d6-8b8e-344fd299a81a
70f34c5c-3671-44c8-9469-99f9786efec1
TCGA-D8-A1XR
Primary Tumor
TCGA-BRCA
e3a49d98-c7d6-45a1-a8cb-33bab31186c2
93f8d395-2512-41fc-992e-236b706dd281.rna_seq.augmented_star_gene_counts.tsv
e3a49d98-c7d6-45a1-a8cb-33bab31186c2
0b23b5fe-6c7e-4297-bc55-f93fcb830ac4
TCGA-D8-A27R
Primary Tumor
TCGA-BRCA
1b65bcb7-8170-4eb8-af93-c547b984c571
ad502a9c-1f1a-4118-a8f9-2cffb9b0c610.rna_seq.augmented_star_gene_counts.tsv
1b65bcb7-8170-4eb8-af93-c547b984c571
ad01259b-d858-40bc-a6ba-0bb06e996afb
TCGA-A2-A0SV
Primary Tumor
TCGA-BRCA
51aab02d-11b1-4ef3-a8f3-8146b6c24aad
0f382cf1-3e52-4078-bf12-cc6ba998ed3f.rna_seq.augmented_star_gene_counts.tsv
51aab02d-11b1-4ef3-a8f3-8146b6c24aad
56033839-35d5-4d72-8b8c-400cb345263d
TCGA-E9-A22G
Primary Tumor
TCGA-BRCA
2c74854f-4afe-48c3-9c81-d64634c14677
4fb219d8-519a-4ce9-a3f1-28fae295424f.rna_seq.augmented_star_gene_counts.tsv
2c74854f-4afe-48c3-9c81-d64634c14677
34126cd5-cc38-4198-8582-c14fb5db7acb
TCGA-OL-A6VQ
Primary Tumor
TCGA-BRCA
c8b0b391-320c-4fea-9b68-3070103cb148
508e541e-c751-42cd-8f8c-a57a835daf1b.rna_seq.augmented_star_gene_counts.tsv
c8b0b391-320c-4fea-9b68-3070103cb148
0d146997-cfdc-4587-888c-e876fc455c80
TCGA-A2-A4RW
Primary Tumor
TCGA-BRCA
cd47d9e9-8072-4681-93ac-6c1420f6624c
754df69c-2fab-4037-8673-fd3be673fc09.rna_seq.augmented_star_gene_counts.tsv
cd47d9e9-8072-4681-93ac-6c1420f6624c
7588a286-6935-424a-bc5f-92e24c83eb37
TCGA-B6-A0WV
Primary Tumor
TCGA-BRCA
98dc2008-d132-4a88-b428-45b0f715b296
d769bce5-c92f-472f-8bb8-4bf4593e29d7.rna_seq.augmented_star_gene_counts.tsv
98dc2008-d132-4a88-b428-45b0f715b296
6af6d256-a753-46d2-b611-e4094ff265aa
TCGA-LL-A9Q3
Primary Tumor
TCGA-BRCA
End of preview. Expand in Data Studio

YAML Metadata Warning:empty or missing yaml metadata in repo card

Check out the documentation for more information.

TCGA-BRCA RNA-seq Dataset

Source

The dataset contains real RNA-seq gene expression data from TCGA-BRCA obtained from the NCI Genomic Data Commons (GDC).

Content

  • Raw RNA-seq files: 1231
  • Project: TCGA-BRCA
  • Sample type: Primary Tumor

Processing

  1. Downloaded from GDC
  2. Extracted STAR gene counts
  3. Selected protein/gene expression rows
  4. Filtered low-expression genes:
    • TPM > 1 in at least 10% of samples
  5. Applied log1p transformation

Files

  • raw/rna/

    • Original GDC RNA-seq files
  • processed/expression_matrix_log1p.parquet

    • Gene expression matrix
    • 23375 genes x 1231 samples
  • processed/sample_metadata.csv

    • Sample-level metadata from GDC
Downloads last month
19