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The dataset generation failed
Error code: DatasetGenerationError
Exception: IndexError
Message: list index out of range
Traceback: Traceback (most recent call last):
File "/usr/local/lib/python3.12/site-packages/datasets/builder.py", line 1811, in _prepare_split_single
original_shard_lengths[original_shard_id] += len(table)
~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^
IndexError: list index out of range
The above exception was the direct cause of the following exception:
Traceback (most recent call last):
File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 1347, in compute_config_parquet_and_info_response
parquet_operations = convert_to_parquet(builder)
^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 980, in convert_to_parquet
builder.download_and_prepare(
File "/usr/local/lib/python3.12/site-packages/datasets/builder.py", line 882, in download_and_prepare
self._download_and_prepare(
File "/usr/local/lib/python3.12/site-packages/datasets/builder.py", line 943, in _download_and_prepare
self._prepare_split(split_generator, **prepare_split_kwargs)
File "/usr/local/lib/python3.12/site-packages/datasets/builder.py", line 1646, in _prepare_split
for job_id, done, content in self._prepare_split_single(
^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/local/lib/python3.12/site-packages/datasets/builder.py", line 1832, in _prepare_split_single
raise DatasetGenerationError("An error occurred while generating the dataset") from e
datasets.exceptions.DatasetGenerationError: An error occurred while generating the datasetNeed help to make the dataset viewer work? Make sure to review how to configure the dataset viewer, and open a discussion for direct support.
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ATM37883.1_CP023913_Klebsiella_pneumoniae_AcrsI-E_Region_2853403_2908376 anti_CRISPR3644_WP_038434996.1_AcrIE8.1_I-E_Klebsiella_pneumoniae_Verified 1.000 7.248E-01 7.135E-01 7.135E-01 9.024E-01 0.984 63 1 0 1 63 1 63 1.320E-10 306 |
ATM37883.1_CP023913_Klebsiella_pneumoniae_AcrsI-E_Region_2853403_2908376 anti_CRISPR0005_YP_007392740.1_AcrIF5_I-F_Pseudomonas_phage_JBD5_Verified 0.000 2.999E-01 2.406E-01 2.084E-01 3.882E-01 0.186 43 30 2 18 58 39 78 2.949E+00 9 |
ATM37883.1_CP023913_Klebsiella_pneumoniae_AcrsI-E_Region_2853403_2908376 anti_CRISPR0433_ASD50988.1_AcrIIA5_II-A_Streptococcus_phage_D4276_Verified 0.000 3.944E-01 1.895E-01 9.743E-02 3.857E-01 0.100 30 21 1 36 59 77 106 9.947E+00 4 |
ESR95706.1_AYNE01000071_Pseudomonas_aeruginosa_DHS01_AcrsI-E_Region_50017_79666 anti_CRISPR0003_YP_007392440.1_AcrIF3_I-F_Pseudomonas_phage_JBD88a_Verified 1.000 9.715E-01 9.647E-01 9.647E-01 9.256E-01 0.950 140 7 0 1 140 1 140 5.044E-19 731 |
ESR95706.1_AYNE01000071_Pseudomonas_aeruginosa_DHS01_AcrsI-E_Region_50017_79666 anti_CRISPR0004_YP_007392739.1_AcrIF3_I-F_Pseudomonas_phage_JBD5_Verified 1.000 5.654E-01 5.554E-01 5.587E-01 7.038E-01 0.869 138 18 0 1 138 1 138 3.319E-15 391 |
ESR95706.1_AYNE01000071_Pseudomonas_aeruginosa_DHS01_AcrsI-E_Region_50017_79666 anti_CRISPR0488_WP_087937214.1_AcrIE6_I-E_Pseudomonas_aeruginosa_Verified 0.016 5.288E-01 3.013E-01 4.820E-01 4.836E-01 0.078 76 62 4 5 77 7 77 2.906E+00 17 |
ESR95706.1_AYNE01000071_Pseudomonas_aeruginosa_DHS01_AcrsI-E_Region_50017_79666 anti_CRISPR3686_WP_185398244.1_AcrVIA1_VI-A_Listeria_seeligeri_LS46_Verified 0.010 3.273E-01 2.976E-01 1.939E-01 4.379E-01 0.126 134 104 4 11 140 108 232 2.438E+00 14 |
ESR95706.1_AYNE01000071_Pseudomonas_aeruginosa_DHS01_AcrsI-E_Region_50017_79666 anti_CRISPR1284_AVO22749.1_AcrIIA6_II-A_Streptococcus_phage_D1811_Verified 0.008 2.618E-01 1.960E-01 1.607E-01 3.975E-01 0.151 99 73 5 1 93 1 94 2.299E+00 12 |
ESR95706.1_AYNE01000071_Pseudomonas_aeruginosa_DHS01_AcrsI-E_Region_50017_79666 anti_CRISPR0119_WP_042743676.1_AcrIIC3_II-C_Neisseria_meningitidis_Verified 0.000 4.078E-01 1.810E-01 2.128E-01 3.062E-01 0.119 67 40 4 2 53 16 78 4.378E+00 9 |
ESR95706.1_AYNE01000071_Pseudomonas_aeruginosa_DHS01_AcrsI-E_Region_50017_79666 anti_CRISPR0561_VDB32353.1_AcrIIA10_II-A_metagenome_Verified 0.000 3.830E-01 1.519E-01 1.861E-01 3.826E-01 0.156 51 39 2 11 57 57 107 6.214E+00 8 |
ESR95706.1_AYNE01000071_Pseudomonas_aeruginosa_DHS01_AcrsI-E_Region_50017_79666 anti_CRISPR0495_AKG19227.1_AcrVA1_V-A_Moraxella_bovoculi_Verified 0.000 2.234E-01 2.130E-01 1.867E-01 3.845E-01 0.132 143 104 9 4 134 23 157 3.673E+00 8 |
ESR95706.1_AYNE01000071_Pseudomonas_aeruginosa_DHS01_AcrsI-E_Region_50017_79666 anti_CRISPR0555_WP_046701302.1_AcrVA1_V-A_Moraxella_bovoculi_Verified 0.000 2.234E-01 2.130E-01 1.867E-01 3.845E-01 0.132 143 104 9 4 134 23 157 3.673E+00 8 |
ESR95706.1_AYNE01000071_Pseudomonas_aeruginosa_DHS01_AcrsI-E_Region_50017_79666 anti_CRISPR0338_EXL25968.1_AcrIIA3_II-A_Listeria_monocytogenes_Lm_1880_Verified 0.000 1.693E-01 1.440E-01 1.575E-01 3.300E-01 0.139 136 75 10 8 123 6 119 3.267E+00 7 |
ESR95706.1_AYNE01000071_Pseudomonas_aeruginosa_DHS01_AcrsI-E_Region_50017_79666 anti_CRISPR1285_AVO22721.1_AcrIIA6_II-A_Streptococcus_phage_D1024_Verified 0.000 1.882E-01 1.484E-01 1.218E-01 3.458E-01 0.123 130 73 5 1 110 1 109 3.464E+00 7 |
ESR95706.1_AYNE01000071_Pseudomonas_aeruginosa_DHS01_AcrsI-E_Region_50017_79666 anti_CRISPR3688_NP_049416.1_AcrIIA6_DT1_II-A_Streptococcus_virus_DT1_Verified 0.000 1.919E-01 1.530E-01 1.276E-01 3.659E-01 0.121 107 77 6 7 104 4 102 4.921E+00 6 |
ESR95706.1_AYNE01000071_Pseudomonas_aeruginosa_DHS01_AcrsI-E_Region_50017_79666 anti_CRISPR3696_WP_136281566.1_AcrIIA29_II-A_Streptococcus_pyogenes_NS3335_Verified 0.000 1.748E-01 1.558E-01 1.159E-01 3.829E-01 0.107 140 101 6 1 119 12 148 4.378E+00 6 |
ESR95706.1_AYNE01000071_Pseudomonas_aeruginosa_DHS01_AcrsI-E_Region_50017_79666 anti_CRISPR0486_WP_064584002.1_AcrIE4-F7_I-E,I-F_Pseudomonas_citronellolis_Verified 0.000 1.628E-01 1.272E-01 1.105E-01 4.071E-01 0.161 68 40 3 28 90 1 56 8.303E+00 4 |
ESR95706.1_AYNE01000071_Pseudomonas_aeruginosa_DHS01_AcrsI-E_Region_50017_79666 anti_CRISPR0432_WP_034985946.1_AcrVIB_VI-B_Bergeyella_zoohelcum_Verified 0.000 1.752E-01 1.621E-01 1.270E-01 3.839E-01 0.116 129 103 6 14 135 76 200 7.397E+00 4 |
ESR95706.1_AYNE01000071_Pseudomonas_aeruginosa_DHS01_AcrsI-E_Region_50017_79666 anti_CRISPR0490_WP_038819808.1_AcrIF11_I-F_Pseudomonas_aeruginosa_Verified 0.000 2.592E-01 9.782E-02 1.030E-01 3.029E-01 0.200 55 32 3 67 112 56 107 9.860E+00 3 |
ESR95706.1_AYNE01000071_Pseudomonas_aeruginosa_DHS01_AcrsI-E_Region_50017_79666 anti_CRISPR0556_WP_046699156.1_AcrVA4_V-A_Moraxella_bovoculi_Verified 0.000 2.172E-01 1.720E-01 1.194E-01 3.185E-01 0.160 125 63 7 5 88 68 191 8.794E+00 3 |
KTK51907.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR0004_YP_007392739.1_AcrIF3_I-F_Pseudomonas_phage_JBD5_Verified 1.000 9.264E-01 9.201E-01 9.201E-01 8.796E-01 0.956 139 6 0 1 139 1 139 5.577E-18 662 |
KTK51907.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR0003_YP_007392440.1_AcrIF3_I-F_Pseudomonas_phage_JBD88a_Verified 1.000 6.122E-01 6.052E-01 6.017E-01 7.838E-01 0.862 138 19 0 1 138 1 138 1.897E-15 439 |
KTK51907.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR0488_WP_087937214.1_AcrIE6_I-E_Pseudomonas_aeruginosa_Verified 0.063 5.840E-01 3.166E-01 4.921E-01 5.009E-01 0.086 69 55 4 1 64 1 66 1.226E+00 26 |
KTK51907.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR1284_AVO22749.1_AcrIIA6_II-A_Streptococcus_phage_D1811_Verified 0.016 2.867E-01 2.177E-01 1.744E-01 4.291E-01 0.122 114 81 4 4 101 2 112 1.226E+00 17 |
KTK51907.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR3695_WP_066028544.1_AcrIIA28_II-A_Streptococcus_phage_Javan128_Verified 0.008 5.825E-01 2.437E-01 3.539E-01 4.720E-01 0.090 44 39 1 8 50 20 63 5.572E+00 12 |
KTK51907.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 new_08_WP_066028544_AcrIIA28_Streptococcus 0.008 5.825E-01 2.437E-01 3.539E-01 4.720E-01 0.090 44 39 1 8 50 20 63 5.572E+00 12 |
KTK51907.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 new_32_WP_014607086_AcrIC11_Xanthomonas 0.008 4.190E-01 1.747E-01 1.682E-01 3.909E-01 0.166 48 35 3 5 50 86 130 3.301E+00 12 |
KTK51907.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR0553_WP_049372635.1_AcrIIC4_II-C_Haemophilus_parainfluenzae_Verified 0.007 4.356E-01 2.366E-01 3.260E-01 3.886E-01 0.131 61 46 3 6 66 31 84 3.931E+00 11 |
KTK51907.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR0430_EKB54194.1_AcrVIB_VI-B_Bergeyella_zoohelcum_ATCC_43767_Verified 0.007 2.262E-01 1.874E-01 1.329E-01 4.050E-01 0.125 135 91 6 1 109 3 136 2.327E+00 11 |
KTK51907.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR3686_WP_185398244.1_AcrVIA1_VI-A_Listeria_seeligeri_LS46_Verified 0.000 5.699E-01 2.984E-01 1.947E-01 5.064E-01 0.127 55 48 0 3 57 176 230 7.023E+00 10 |
KTK51907.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR3636_WP_074627086.1_AcrIIA18_II-A_Streptococcus_gallolyticus_Verified 0.000 3.400E-01 1.990E-01 1.652E-01 4.056E-01 0.230 65 42 2 30 90 61 121 5.257E+00 8 |
KTK51907.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR1288_DAE23562.1_AcrIIA11a.3_II-A_from_human_oral_and_fecal_metagenomes_Verified 0.000 4.547E-01 1.899E-01 1.422E-01 4.449E-01 0.162 74 43 2 65 138 130 184 7.880E+00 7 |
KTK51907.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR3652_AYH27148.1_AcrIF20.2_I-F_Pectobacterium_parmentieri_Verified 0.000 2.409E-01 1.874E-01 2.039E-01 3.810E-01 0.165 127 74 7 7 127 4 104 5.572E+00 6 |
KTK51907.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 new_33_WP_012914795_AcrIF12_Xanthomonas 0.000 3.567E-01 1.945E-01 2.110E-01 3.538E-01 0.059 67 55 3 1 64 25 86 7.023E+00 6 |
KTK51907.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR3646_RKO74367.1_AcrIF16_I-F_Pectobacterium_parmentieri_Verified 0.000 4.151E-01 1.332E-01 1.126E-01 3.182E-01 0.184 38 29 1 31 66 67 104 7.023E+00 6 |
KTK51907.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR3688_NP_049416.1_AcrIIA6_DT1_II-A_Streptococcus_virus_DT1_Verified 0.000 1.840E-01 1.492E-01 1.281E-01 3.256E-01 0.107 130 69 8 7 111 4 111 4.416E+00 6 |
KTK51907.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR0556_WP_046699156.1_AcrVA4_V-A_Moraxella_bovoculi_Verified 0.000 1.905E-01 1.463E-01 1.049E-01 3.278E-01 0.133 90 49 7 2 69 66 148 6.256E+00 5 |
KTK51907.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR0407_YP_007392738.1_AcrIE1_I-E_Pseudomonas_phage_JBD5_Verified 0.000 2.429E-01 1.711E-01 2.318E-01 4.004E-01 0.122 106 82 4 31 135 4 99 9.355E+00 4 |
KTK51907.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR0338_EXL25968.1_AcrIIA3_II-A_Listeria_monocytogenes_Lm_1880_Verified 0.000 1.772E-01 1.716E-01 1.864E-01 3.648E-01 0.140 128 82 9 11 123 5 119 7.023E+00 4 |
KTK51908.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR0005_YP_007392740.1_AcrIF5_I-F_Pseudomonas_phage_JBD5_Verified 1.000 1.001E+00 9.886E-01 9.886E-01 9.794E-01 1.000 79 0 0 1 79 1 79 1.886E-17 634 |
KTK51908.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 new_13_MBR0315966_AcrIF5_Synergistaceae 0.941 6.471E-01 6.210E-01 2.960E-01 5.769E-01 0.101 79 67 4 1 78 1 76 1.081E-02 71 |
KTK51908.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR1287_QEH00205.1_AcrIIA11a.1_II-A_from_human_oral_and_fecal_metagenomes_Verified 0.057 4.834E-01 3.098E-01 1.605E-01 3.742E-01 0.125 48 34 3 9 55 99 139 4.649E-01 25 |
KTK51908.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 new_14__AcrIE1_Bacteroidota_Verified 0.051 5.467E-01 3.079E-01 1.748E-01 3.513E-01 0.190 42 28 3 17 57 14 50 5.647E-01 24 |
KTK51908.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR3690_AZF92405.1_AcrIIA24_II-A_Streptococcus_phage_CHPC930_Verified 0.020 4.283E-01 2.494E-01 2.070E-01 3.426E-01 0.113 44 32 3 11 52 42 80 1.012E+00 18 |
KTK51908.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR0486_WP_064584002.1_AcrIE4-F7_I-E,I-F_Pseudomonas_citronellolis_Verified 0.020 3.154E-01 2.488E-01 1.850E-01 3.188E-01 0.161 68 41 4 9 70 60 117 4.649E-01 18 |
KTK51908.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR1286_WP_064786071.1_AcrIIA11_II-A_Clostridiales_Verified 0.020 4.429E-01 2.519E-01 1.361E-01 2.862E-01 0.155 45 29 3 11 55 104 139 6.860E-01 18 |
KTK51908.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 new_11__AcrVA5_Bacteroidota_Verified 0.011 3.027E-01 2.834E-01 1.703E-01 3.316E-01 0.089 112 62 5 5 78 9 118 8.333E-01 15 |
KTK51908.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR0556_WP_046699156.1_AcrVA4_V-A_Moraxella_bovoculi_Verified 0.011 5.098E-01 2.007E-01 7.399E-02 2.765E-01 0.160 25 19 2 12 35 30 53 1.594E+00 15 |
KTK51908.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR0001_YP_007392342.1_AcrIF1_I-F_Pseudomonas_phage_JBD30_Verified 0.010 3.928E-01 2.720E-01 2.750E-01 2.878E-01 0.196 66 36 6 15 78 22 72 1.230E+00 14 |
KTK51908.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR3654_PWD66516.1_AcrIF22_I-F_I-E_Pectobacterium_parmentieri_Verified 0.010 5.062E-01 3.269E-01 3.007E-01 3.594E-01 0.086 46 39 1 4 49 26 68 2.204E+00 14 |
KTK51908.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR1291_AcrIIA11a.6_AcrIIA11a.6_II-A_from_human_oral_and_fecal_metagenomes_Verified 0.010 3.426E-01 2.646E-01 1.803E-01 3.588E-01 0.145 55 39 3 2 55 94 141 1.494E+00 14 |
KTK51908.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR3684_AAR27922.1_AcrIA_I-A_Sulfolobus_virus_Ragged_Hills_Verified 0.007 4.357E-01 2.516E-01 8.868E-02 2.938E-01 0.062 32 30 0 7 38 3 34 2.857E+00 11 |
KTK51908.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR3644_WP_038434996.1_AcrIE8.1_I-E_Klebsiella_pneumoniae_Verified 0.000 4.470E-01 2.315E-01 2.863E-01 2.837E-01 0.146 41 34 1 39 78 18 58 3.252E+00 10 |
KTK51908.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR0494_AKG19229.1_AcrIC1_I-C_Moraxella_bovoculi_Verified 0.000 2.558E-01 1.884E-01 9.104E-02 2.170E-01 0.150 80 38 5 17 70 46 121 1.312E+00 10 |
KTK51908.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR0384_AEO04689.1_AcrIIA4_II-A_Listeria_monocytogenes_J0161_Verified 0.000 2.903E-01 2.575E-01 2.452E-01 3.296E-01 0.125 80 54 4 3 79 11 77 2.677E+00 9 |
KTK51908.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR0007_YP_002332454.1_AcrIF2_I-F_Pseudomonas_phage_MP29_Verified 0.000 3.083E-01 1.718E-01 1.569E-01 2.398E-01 0.111 45 25 3 17 54 31 67 2.066E+00 9 |
KTK51908.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR3698_WP_033585134.1_AcrIIA31_II-A_Streptococcus_sp._SR1_Verified 0.000 3.046E-01 1.493E-01 1.648E-01 1.738E-01 0.250 24 16 2 20 41 41 64 2.204E+00 8 |
KTK51908.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 new_09_WP_033585134_AcrIIA31_Streptococcus 0.000 3.046E-01 1.493E-01 1.648E-01 1.738E-01 0.250 24 16 2 20 41 41 64 2.204E+00 8 |
KTK51908.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR0006_NP_938237.1_AcrIF2_I-F_Pseudomonas_phage_D3112_Verified 0.000 4.296E-01 2.811E-01 2.532E-01 3.237E-01 0.057 52 38 2 11 55 25 72 5.115E+00 8 |
KTK51908.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR3667_WP_015972868.1_AcrIF2_I-C_I-F_Pseudomonas_aeruginosa_Verified 0.000 4.296E-01 2.811E-01 2.532E-01 3.237E-01 0.057 52 38 2 11 55 25 72 5.115E+00 8 |
KTK51908.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR0051_KEK29119.1_AcrIF10_I-F_Shewanella_xiamenensis_Verified 0.000 3.399E-01 2.557E-01 2.212E-01 3.175E-01 0.101 59 46 2 1 53 3 60 4.213E+00 8 |
KTK51908.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR3669_KSR23770.1_AcrIC3_I-C_Pseudomonas_aeruginosa_Verified 0.000 3.920E-01 2.710E-01 2.296E-01 3.253E-01 0.127 55 34 3 7 56 31 76 4.495E+00 8 |
KTK51908.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR3686_WP_185398244.1_AcrVIA1_VI-A_Listeria_seeligeri_LS46_Verified 0.000 3.415E-01 1.715E-01 5.958E-02 2.336E-01 0.153 52 24 3 15 53 56 100 2.857E+00 8 |
KTK51908.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR3678_WP_101192668.1_AcrIE9_I-E_Pseudomonas_pharmafabricae_Verified 0.000 2.890E-01 2.084E-01 2.153E-01 2.986E-01 0.109 55 33 3 12 54 17 67 3.702E+00 7 |
KTK51908.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 new_17__AcrID1_Bacteroidota_Verified 0.000 4.593E-01 2.308E-01 1.204E-01 2.423E-01 0.090 44 31 2 19 56 108 148 5.457E+00 7 |
KTK51908.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR3688_NP_049416.1_AcrIIA6_DT1_II-A_Streptococcus_virus_DT1_Verified 0.000 2.849E-01 2.015E-01 1.026E-01 2.440E-01 0.090 66 42 5 5 53 116 180 3.469E+00 7 |
KTK51908.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR1289_AcrIIA11a.4_AcrIIA11a.4_II-A_from_human_oral_and_fecal_metagenomes_Verified 0.000 3.864E-01 2.874E-01 1.584E-01 3.704E-01 0.076 52 42 3 5 55 92 138 5.820E+00 7 |
KTK51908.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR3636_WP_074627086.1_AcrIIA18_II-A_Streptococcus_gallolyticus_Verified 0.000 2.429E-01 2.207E-01 1.370E-01 2.780E-01 0.138 72 47 5 15 79 41 104 4.213E+00 6 |
KTK51908.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR3659_ERK48335.1_AcrVIA3_VI-A_Leptotrichia_wadei_F0279_Verified 0.000 3.375E-01 1.871E-01 1.871E-01 2.263E-01 0.185 27 21 1 4 30 13 38 5.457E+00 5 |
KTK51908.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR1293_OHE43765.1_AcrIIA11b.3_II-A_from_human_oral_and_fecal_metagenomes_Verified 0.000 3.064E-01 1.522E-01 9.139E-02 2.352E-01 0.080 50 32 3 17 55 94 140 5.820E+00 5 |
KTK51908.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR3629_AcrIIA14_AcrIIA14_II-A_nan_Verified 0.000 2.583E-01 2.533E-01 1.488E-01 2.955E-01 0.120 100 46 8 1 78 66 145 5.820E+00 5 |
KTK51908.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR0034_AFC22483.1_AcrIF8Pec_I-F_Pectobacterium_phage_ZF40_Verified 0.000 2.892E-01 2.122E-01 1.922E-01 2.773E-01 0.064 78 36 4 1 74 1 45 7.527E+00 4 |
KTK51908.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR3635_WP_099390844.1_AcrIIA18_II-A_Streptococcus_macedonicus_Verified 0.000 2.700E-01 1.580E-01 8.071E-02 2.465E-01 0.166 18 15 0 18 35 5 22 7.527E+00 4 |
KTK51908.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR1294_WP_023346767.1_AcrIIA11c.5_II-A_from_human_oral_and_fecal_metagenomes_Verified 0.000 2.545E-01 2.386E-01 1.225E-01 3.194E-01 0.108 83 53 5 1 78 93 159 7.060E+00 4 |
KTK51908.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 new_04_WP_050316271_AcrIIA33_Streptococcus 0.000 3.255E-01 2.289E-01 2.082E-01 2.640E-01 0.000 39 37 1 18 54 4 42 9.708E+00 3 |
KTK51908.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 new_24_WP_050316271_AcrIIA33_Streptococcus 0.000 3.255E-01 2.289E-01 2.082E-01 2.640E-01 0.000 39 37 1 18 54 4 42 9.708E+00 3 |
KTK51908.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 new_19_AOS58370_AcrIA_Sulfolobus 0.000 1.702E-01 1.386E-01 1.215E-01 2.114E-01 0.062 64 49 5 1 54 7 69 7.060E+00 3 |
KTK51908.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR3664_NP_666617.1_AcrIII1_III-1_Sulfolobus_islandicus_rod-shaped_virus_1_Verified 0.000 2.920E-01 1.691E-01 1.356E-01 2.691E-01 0.153 52 31 3 12 56 60 105 8.553E+00 3 |
KTK51908.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 new_28__AcrIIIB2_Sulfolobus 0.000 3.668E-01 2.577E-01 1.622E-01 2.963E-01 0.119 67 36 5 12 77 54 98 9.708E+00 3 |
KTK51908.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159 anti_CRISPR3682_QEH00216.1_AcrIIA22_II-A_uncultured_bacterium_Verified 0.000 2.838E-01 1.060E-01 1.362E-01 1.388E-01 0.080 25 16 2 18 35 29 53 9.113E+00 2 |
ORI35087.1_MVDZ01000001_Listeria_monocytogenes_AcrsII-A_Region_2363271_2405615 anti_CRISPR0497_AKG19230.1_AcrVA3_V-A_Moraxella_bovoculi_Verified 0.000 2.583E-01 2.480E-01 1.136E-01 5.541E-01 0.160 87 53 3 1 67 1 87 3.930E+00 7 |
ORI35087.1_MVDZ01000001_Listeria_monocytogenes_AcrsII-A_Region_2363271_2405615 new_06_YP_001039944_AcrIIA23_Streptococcus 0.000 6.186E-01 1.748E-01 1.324E-01 6.569E-01 0.125 16 14 0 1 16 25 40 9.650E+00 5 |
OXT92653.1_NLBC01000022_Pseudomonas_aeruginosa_AcrsI-F_Region_20123_69623 anti_CRISPR0022_ACD38920.1_AcrIF7_I-F_Pseudomonas_aeruginosa_Verified 1.000 7.214E-01 7.120E-01 5.902E-01 6.577E-01 0.985 67 1 0 1 67 17 83 5.834E-11 262 |
OXT92653.1_NLBC01000022_Pseudomonas_aeruginosa_AcrsI-F_Region_20123_69623 anti_CRISPR0486_WP_064584002.1_AcrIE4-F7_I-E,I-F_Pseudomonas_citronellolis_Verified 0.069 3.189E-01 2.898E-01 1.891E-01 3.383E-01 0.524 61 28 1 2 61 53 113 5.988E-02 27 |
OXT92653.1_NLBC01000022_Pseudomonas_aeruginosa_AcrsI-F_Region_20123_69623 anti_CRISPR3650_RJL39232.1_AcrIF19_I-F_Pectobacterium_carotovorum_(Erwinia_carotovora)_Verified 0.010 3.117E-01 3.013E-01 2.339E-01 3.530E-01 0.073 95 55 4 1 65 1 92 9.794E-01 14 |
OXT92653.1_NLBC01000022_Pseudomonas_aeruginosa_AcrsI-F_Region_20123_69623 anti_CRISPR3666_ACV38859.1_AcrIB_I-B_Leptotrichia_buccalis_C-1013-b_Verified 0.007 2.776E-01 2.265E-01 9.485E-02 2.759E-01 0.129 62 43 4 7 66 58 110 1.126E+00 11 |
OXT92653.1_NLBC01000022_Pseudomonas_aeruginosa_AcrsI-F_Region_20123_69623 new_28__AcrIIIB2_Sulfolobus 0.000 7.459E-01 3.332E-01 1.556E-01 4.087E-01 0.291 24 17 0 30 53 125 148 5.608E+00 10 |
OXT92653.1_NLBC01000022_Pseudomonas_aeruginosa_AcrsI-F_Region_20123_69623 anti_CRISPR3664_NP_666617.1_AcrIII1_III-1_Sulfolobus_islandicus_rod-shaped_virus_1_Verified 0.000 3.818E-01 2.169E-01 1.339E-01 3.548E-01 0.060 50 33 3 16 65 76 111 3.443E+00 9 |
OXT92653.1_NLBC01000022_Pseudomonas_aeruginosa_AcrsI-F_Region_20123_69623 anti_CRISPR3697_WP_143877237.1_AcrIIA30_II-A_Streptococcus_gordonii_NCTC7870_Verified 0.000 2.457E-01 2.319E-01 2.172E-01 2.800E-01 0.142 77 39 4 1 64 1 63 3.211E+00 7 |
OXT92653.1_NLBC01000022_Pseudomonas_aeruginosa_AcrsI-F_Region_20123_69623 new_29__AcrIIA4_Listeria 0.000 4.171E-01 1.887E-01 5.932E-02 2.481E-01 0.305 36 16 3 27 54 255 289 5.608E+00 6 |
OXT92653.1_NLBC01000022_Pseudomonas_aeruginosa_AcrsI-F_Region_20123_69623 new_30__AcrIIA5_Phage 0.000 4.171E-01 1.887E-01 5.932E-02 2.481E-01 0.305 36 16 3 27 54 255 289 5.608E+00 6 |
OXT92653.1_NLBC01000022_Pseudomonas_aeruginosa_AcrsI-F_Region_20123_69623 anti_CRISPR3654_PWD66516.1_AcrIF22_I-F_I-E_Pectobacterium_parmentieri_Verified 0.000 2.653E-01 1.993E-01 1.699E-01 2.765E-01 0.132 53 34 3 15 55 36 88 5.231E+00 5 |
OXT92653.1_NLBC01000022_Pseudomonas_aeruginosa_AcrsI-F_Region_20123_69623 anti_CRISPR0491_ABR13388.1_AcrIF12_I-F_Pseudomonas_aeruginosa_Verified 0.000 6.048E-01 1.916E-01 1.041E-01 2.860E-01 0.083 24 18 1 31 54 48 67 8.491E+00 5 |
OXT92653.1_NLBC01000022_Pseudomonas_aeruginosa_AcrsI-F_Region_20123_69623 anti_CRISPR3628_WP_050337628.1_AcrIIA13_II-A_Staphylococcus_schleiferi_Verified 0.000 2.230E-01 1.777E-01 1.192E-01 2.326E-01 0.150 53 33 3 16 63 55 100 4.245E+00 5 |
OXT92653.1_NLBC01000022_Pseudomonas_aeruginosa_AcrsI-F_Region_20123_69623 anti_CRISPR0496_AKG19228.1_AcrVA2_V-A_Moraxella_bovoculi_Verified 0.000 3.476E-01 2.248E-01 5.719E-02 2.760E-01 0.176 51 25 2 16 58 155 196 6.443E+00 5 |
OXT92653.1_NLBC01000022_Pseudomonas_aeruginosa_AcrsI-F_Region_20123_69623 anti_CRISPR3678_WP_101192668.1_AcrIE9_I-E_Pseudomonas_pharmafabricae_Verified 0.000 5.025E-01 1.248E-01 1.124E-01 1.850E-01 0.333 15 10 0 21 35 48 62 7.927E+00 4 |
OXT92653.1_NLBC01000022_Pseudomonas_aeruginosa_AcrsI-F_Region_20123_69623 anti_CRISPR3694_WP_003055855.1_AcrIIA27_II-A_Streptococcus_pyogenes_K23866_Verified 0.000 2.941E-01 2.268E-01 2.003E-01 3.056E-01 0.173 52 37 3 21 67 29 79 7.399E+00 4 |
OXT92653.1_NLBC01000022_Pseudomonas_aeruginosa_AcrsI-F_Region_20123_69623 new_07_EOI9067955_AcrIIA27_Streptococcus 0.000 2.941E-01 2.268E-01 2.003E-01 3.056E-01 0.173 52 37 3 21 67 29 79 7.399E+00 4 |
OXT92653.1_NLBC01000022_Pseudomonas_aeruginosa_AcrsI-F_Region_20123_69623 anti_CRISPR0558_VDB32354.1_AcrIIA7_II-A_metagenome_Verified 0.000 2.876E-01 2.237E-01 1.620E-01 2.825E-01 0.132 53 40 5 15 65 25 73 6.443E+00 4 |
OXT92653.1_NLBC01000022_Pseudomonas_aeruginosa_AcrsI-F_Region_20123_69623 anti_CRISPR3690_AZF92405.1_AcrIIA24_II-A_Streptococcus_phage_CHPC930_Verified 0.000 3.328E-01 2.410E-01 1.682E-01 3.301E-01 0.098 61 37 3 7 62 39 86 7.927E+00 4 |
End of preview.
YAML Metadata Warning:empty or missing yaml metadata in repo card
Check out the documentation for more information.
Prophage ACR Screening Pipelines
This directory contains two analysis pipelines for screening Anti-CRISPR (Acr) proteins from prophage genomes.
Directory Structure
| Folder | Description |
|---|---|
| double_diff/ | Double-divergence screening pipeline: identifies novel Acr candidates that are significantly different from known Acr proteins at both sequence and structure levels |
| double_similar/ | High-confidence Acr identification pipeline: identifies high-confidence Acr candidates that are highly similar to known Acr proteins at both sequence and structure levels |
Quick Navigation
- double_diff — For discovery of Acrs with novel mechanisms. Excludes proteins with sequence homology (qcovs≥30, pident≥30) or structural similarity to known Acrs, retaining "double-divergent" candidates.
- double_similar — For expansion of known Acr families. Applies stringent filters for sequence (qcovs≥50, pident>50) and structural (TM-score>0.7, prob=1.0) similarity to obtain high-confidence candidates.
Detailed Documentation
Each folder contains a comprehensive README document describing:
- Screening strategies and workflows
- Input and output data formats
- Software tools and parameter settings
- Screening thresholds and criteria
Click the links above to view detailed documentation for each pipeline.
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