stemtoc

Relative mitotic-age counter based on the 95th percentile across 371 in-vivo-filtered mitotic CpGs.

Predicts	mitotic age
Species	Homo sapiens
Tissue	multi-tissue, cultured human cells, whole blood
Data type	DNA methylation
Model type	95th-percentile methylation aggregation
Year	2024

Use with pyaging

import pyaging as pya

pya.pred.predict_age(adata, ["stemtoc"])

Browse every clock in the pyaging Clock Catalogue.

Citation

Zhu, Tianlei, et al. "An improved epigenetic counter to track mitotic age in cells." Nature Communications 15 (2024): 4211.

https://doi.org/10.1038/s41467-024-48649-8