retroelementagev1
Whole-blood Retroelement-Age V1, trained by 10-fold-cross-validated elastic net on EPIC v1.0 CpGs annotated to HERV and active LINE elements.
| Predicts | chronological age |
| Species | Homo sapiens |
| Tissue | whole blood |
| Data type | DNA methylation |
| Model type | elastic net regression |
| Year | 2024 |
Use with pyaging
import pyaging as pya
pya.pred.predict_age(adata, ["retroelementagev1"])
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Citation
Ndhlovu, Lishomwa C., et al. "Retro-age: A unique epigenetic biomarker of aging captured by DNA methylation states of retroelements." Aging Cell 23 (2024): e14288.
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