ocampoatac2

Alternate packaged implementation loaded from the authors' GitHub final_coefs.tsv; it represents the same uncorrected final ATAC-clock target, not a deployable cell-composition-corrected clock.

Predicts	chronological age
Species	Homo sapiens
Tissue	peripheral blood mononuclear cells
Data type	chromatin accessibility
Model type	elastic net regression
Year	2023

Use with pyaging

import pyaging as pya

pya.pred.predict_age(adata, ["ocampoatac2"])

Browse every clock in the pyaging Clock Catalogue.

Citation

Morandini, F. et al. ATAC-clock: An aging clock based on chromatin accessibility. GeroScience 46, 635-650 (2024).

https://doi.org/10.1007/s11357-023-00986-0