dontelightfoot/amyloid-beta-42-quantum-prototype

Amyloid beta-42 — 4-qubit Quantum Prototype

Author: Donte Lightfoot
Org: Locked In Safety STL Inc
Support: donte@biolockmd.net
License: MIT

What this is

A reproducible 4-qubit / 4-site truncated Amyloid β-42–labeled quantum simulation package:

Artifact	Description
Amyloid_beta-42_statevector.npy	16-amplitude statevector
Amyloid_beta-42_samples.csv	4096 shot outcomes
Amyloid_beta-42_circuit.txt	Full circuit diagram (70,018 bytes)
Amyloid_beta-42_circuit.json	Structured moments (674)
Amyloid_beta-42_qubit_hamiltonian.txt	Pauli Hamiltonian
Amyloid_beta-42_amino_features.csv	A,E,F,K site features
full_spectrum_analysis/	Charts + tables
Amyloid_beta42_full_spectrum_evidence_analysis.pdf	Evidence PDF
Amyloid_beta42_full_spectrum_dashboard.html	Dashboard
symbolic_recursion/models/amyloid_beta.py	Runnable model (on full stack repo)

Circuit SHA-256: 623e87ec870bddd0fe38e9e7adb8121963382e369f18f7d6b17b41cde09a5137

Verified metrics (pipeline)

Check	Result
Core file hashes	10/10 match
State energy	≈ −0.220822 (matches analysis)
TVD (bit-reversed samples vs |ψ|²)	≈ 0.02884 (matches analysis)
Spectrum	min ≈ −2.1907, max ≈ 1.0606
Gate counts (analysis)	Rz 336 · CNOT 288 · H 196 · Rx 192

What this is NOT

• Not a full biological Amyloid beta-42 molecular simulation
• Not medical advice, diagnosis, or treatment software
• Not a language model

How to run

Prefer the full stack (model class + embedded circuit):

git clone https://github.com/STLNFTART/symbolic-recursion-coherence
cd symbolic-recursion-coherence
pip install -e .

from symbolic_recursion.models.amyloid_beta import AmyloidBeta42Model, verify_package_integrity

assert verify_package_integrity()["all_core_match"] is True
m = AmyloidBeta42Model()
result = m.run()
print(result["status"], result["state_energy"], result["spectrum"])
print("moments", m.circuit_moments)
# Full circuit text lives ON the model:
print(len(m.full_circuit), m.circuit_sha256)

This Hub folder holds the raw peer-review package files so reviewers can download npy/csv/circuit/PDF without cloning the whole monorepo.

Full stack model card:
https://huggingface.co/dontelightfoot/symbolic-recursion-coherence

GitHub:
https://github.com/STLNFTART/symbolic-recursion-coherence

Support

donte@biolockmd.net · Locked In Safety STL Inc