Datasets:

yxjia
/

tandem-repeat-adjudication-data

locus_id stringlengths 8 8	chrom stringclasses 17 values	start int64 480k 249M	end int64 481k 249M	ref_len int64 17 3.46k	flank_left stringlengths 20 20	flank_right stringlengths 20 20	motifs stringlengths 2 357
TRBQRF9C	chr1	153,964,928	153,965,472	544	CAGCCTGGGCAACAACAGCG	GTAAATCAAGCTAATTAACA	AT,AAAAAAAAAGA,TACTAAAAA,ATTCGTA
TRKFWL9W	chr17	68,309,858	68,310,008	150	ATAAGAGTGAGACTCTGTCT	TGTTGCCCAGGTTGGCGTGC	GTTT,AAATAAGAAAGTAAAG
TRGK2EYR	chr16	12,811,333	12,811,381	48	GCAACAAAGCGAGACTCTGT	TAGAGTCCTAGATATAAGAT	TCTAA
TRCQFYQB	chr6	118,747,459	118,747,534	75	TCAGCACTCCAGCCTGAGCA	AAACTGGAAGGTTGTGCTAC	TAATAATAATAAAA
TR9FCZ35	chr7	82,461,859	82,461,922	63	ACAGACCCTAGGAAATAGCA	AGGACTTTAAGATTTGGTTG	CACACACACATG
TRVPUALW	chr2	122,323,180	122,323,297	117	TGTCTGTCTGTCTGTCTCTC	CTAAGACATACAGTATTCTT	TCCT,TCTCACTAGTCTCTCCTTAATAAGTAATTTGCTCAAGATCTGTA
TRTQTJK9	chr2	90,161,365	90,161,452	87	TCAGCTCCTTGATAGTATCT	TTGAGTTTTAAGACTGGGGG	AAAC
TRUGTZJT	chr7	74,761,606	74,761,694	88	AGGCTGGTCTCAAAATCCTG	GGTGTACAACTGTAGTCCCA	AC
TRLUBW7L	chr15	82,455,667	82,455,810	143	CCAGCCTGGGTGGCAGAGCA	TTGGGAATCAGTCACCGTGC	AC,AT,TG,TAAA,TA
TRCP2784	chr5	38,328,699	38,328,731	32	GCAAATTTGAATATTTCCCC	TTTTTTTTTTTTTGCAAATT	TG
TRJ48CU3	chr19	15,931,500	15,934,110	2,610	GGAGTGGGAGGACAGGGAGG	CCCCAGCCACCCTCAAAACC	AGAGGAATGAGTGAGTGAGG,CCTC
TR9W96E4	chr20	37,608,239	37,608,667	428	GATCCTCGTGCCTCAGCCTC	CTGGGAGCACTCTTTTTTTT	TCCTG,CAC
TRNT7ALG	chr8	34,938,794	34,938,877	83	TTGGACCTGAATGCATTAGG	ATGGGTGTTTGGATGTAAGA	TTGTT
TRGQ3K3M	chr11	2,005,205	2,005,765	560	AGAGCACTTGGGTGGGGATG	ACGGGTACGGCACATCATGC	TGGGCACAGCTGTCACCCGGATAGGGACATGGCACAGCGATGTCACCTGGATAGGACACATGAGCACTGTGTGTCACCTGGATAGGGACA,CACAGTGATGTCAC
TRK63R84	chr6	164,145,846	164,146,350	504	AAAAATACAAAAAAAAAAAA	TGTACTCCAGCCTGGGCAAC	GGT,AC,TACTAAAAA,GGAGGT
TRHCULSS	chr5	177,820,008	177,820,093	85	ATATTTCTTCATTTGCTGTA	AGGCTGGAGTGTACTGGCAC	TTTA
TRS9PYXQ	chr20	49,201,081	49,201,130	49	AAAAAAAAAAAAGAAGAAGA	AAGGGCTGGGGAAGGGAAAG	AGATCAGTG
TRF9BXPA	chr1	246,291,840	246,292,556	716	ACAGGTAGGTAGTAAAGGAG	GATCACTATATGGATAAATA	CAACACACCAGCATCTTAGACTTACTATC
TRMNXBAW	chr19	49,728,961	49,729,969	1,008	CCTGAGTAGCTGGGACTACA	TGCAATGGCACGATCTTGGT	CT,ATTTTATTT,TTTTTGTTGTTGTTGTTGT,GGGATTACAGGCATGAGCCACAGCGCCCAGCCAATTTTTGTATTTTTTAGTAGAAATG,ATTTTTAGT
TR5SMWRU	chr5	18,970,710	18,970,774	64	ATGGATCACACAGTAAAACC	TTTATAATGTACAACAGCCT	TTAT,CT,AA
TRAGMXMH	chr19	53,850,203	53,851,697	1,494	GCTGGAGGGAGTCCGGGGGT	AGATGTTTCCCAATGCCTTG	GGA,AAATAA,AAAAGAAAAAA,ATTTTTAGT,ATGTTATACACCATAAATACATT,TGATCTCCTGACCTCG
TRUQE9EM	chr12	69,603,772	69,603,817	45	TTTTTATGGCTGTGTTGTAT	TATTATTATACTTTAAGTTT	TTCTTTT
TRWQX4LZ	chr6	33,243,973	33,245,747	1,774	TCCTCCTGCCTCTCAGCCTC	AACAAAACAAAATGTGGAAG	TGTA,AT,AAAT,CAC,GTG,AGGC
TRLS8PJK	chr6	49,595,933	49,596,484	551	CCACCAGCTATATTCTAGGG	TGTATTTATAAAGTCAAACT	ATATATATCTTGGATATATATATATCTAGGATATATAT,TATCTATATTA
TR9GYVAE	chr12	32,048,711	32,048,795	84	CATGCCACTGAACTCCAGCC	ACCCTGTTAGGAATGGGGCC	CAA
TR9GSB4E	chr1	207,076,633	207,076,705	72	TGGATCTCTGTGCTGACTGA	AGACCAGGAGGATCTGTGTG	CTGACAGACAGACTCTATAGTGTCTATATG
TR98YL4Z	chr2	33,188,451	33,188,512	61	AAAAAAAAAAAAAGAATTTT	TAAAACTTTTGATTTGCCTG	CATG
TR2RNNVD	chr6	169,552,990	169,553,144	154	CCGGTGTGTGTGTGTGTGTG	GAGCACTGTGGGACAGCAGC	GGAGGGCCT,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAGGGAGGTGGGGAGGGCCTGGAGGGCC
TRFLBWDQ	chr1	196,689,002	196,689,074	72	GAGAAGAAAATGCAGGGCTC	GCATATTTCTCAACCGAAAA	AGAA
TR8K5URV	chr6	109,177,637	109,177,700	63	AAAATAAAATTAAAAATTAA	GGAAATAGGTAAATTCACTG	AT
TRKQEY4V	chr8	141,581,184	141,581,663	479	GGGCCGTCCACCCCTTGAGA	CTGGGAGGCGGAGCAGGAGT	GAGACAGAGA,AG
TRER2ELA	chr5	6,422,510	6,422,623	113	AAAAAGCTGAATTCACTAAA	GAAAACAAAAGAAAAGAAAA	GAAG
TRBNAZWT	chr2	135,808,147	135,808,207	60	GTTCATTGCTGTATTCCCAG	GCTAGGGACCCTGTGTGTGT	AATG
TRERY5TZ	chr17	11,654,388	11,654,473	85	AAAAAAAAAAGTTTAAAATC	TGAAAGTCAGAATGAGAAAA	GATCTATCACCTATCTATT
TRJ3WU7X	chr4	119,204,492	119,204,538	46	ACGAGGGAGAAACTGTCTCA	AGTTGCTGCTTGCAATTTAA	GCT,TTCT
TRUY4ZAG	chr20	35,153,240	35,154,648	1,408	ACCTCCCAGCCGCCTGCCTT	GTGTCTGTGTAGAAAGAAGT	GCCTCTGCCCGGCCGCCATCCCATCTGGGAAGTGAGGAGC,CCAG,AGGG,GGGA,GAAAGGTCGG,CGGCCACCCGCC
TRN2Z96U	chr15	100,243,790	100,243,862	72	CAGAGCAAGACTCCATCTTA	AGTGTGATTAGTCATCCGCT	AAAAAAAAAAAATGAAAG
TR5R8YKQ	chr5	101,096,759	101,096,875	116	TGTCTATCTATCTATCTATC	TATGGTAAGACTGTGTTTAG	TATATATTCCATATACACACA,AC,TGTTTA
TRDAZJUX	chr7	57,045,419	57,045,501	82	GTGAAGTGGAACCATACTGT	ATAAGATAGGTCCCATCAAT	TG,AC,AAT
TRPKPKCU	chr6	160,785,790	160,785,931	141	TGTAAGACTGGTCTCTTTTT	CTGAGAAAGTTTATCAACTC	TAAAAAAC,TTTGGCTCTGCCCTCAAAGGTGCA
TRJT2DWB	chr2	87,905,673	87,905,747	74	AACTCACTTTTACAACATTT	ATAAACATAATGAACCTCTT	ACAGTTATATATATA
TRUN6BRW	chr8	6,243,710	6,245,330	1,620	AAAAAAAATCTCGGCCTGGT	GATAAACTGCAGCTACCTTT	AAAT,AAAAAT,AAAAG,GGT,CAGAGATG,AAAAAAAGAAA
TRF2TXLY	chr7	39,780,876	39,781,239	363	CTGCTAAAATTAATACTTTT	ATGCTCTCACTCAGGCTGCA	ATTAAATTTCTAT,TTGCCCAGGCTAGA
TR82LSWM	chr20	19,663,371	19,663,520	149	ATTTGCCATCAGCCACAGGG	GTGATGGGGCATCTTCACAC	CCT
TRTW34MY	chr4	61,392,659	61,392,725	66	TGCGCCACTGCGCTCCAGCC	AGAGAGAAAAGAGTCTCATG	AAAAAAAGAAAAAAAA
TRTRYMAH	chr13	37,652,551	37,652,632	81	ATTGATCCACATAAATCGGA	TTCTAGACAAGTTTATAGGT	TTTCTCCCTCCTCTTCCTTTCCTTTCTTA
TRL8PR4H	chr2	215,891,783	215,891,848	65	CTTCCACCTTTCTCCTCACA	GTCTTGATCAATCGCCCAGG	TTTC
TR6SHVX5	chr8	128,831,635	128,831,695	60	CTTTGTACACACAAGTTCAT	CAAAGAGGTTAAGTAATTCG	ATC
TRRSH49L	chr11	61,018,486	61,018,550	64	GGATGCATTCGCTCAAGGGG	AGGCATGGTAGCTCAAGCCT	AAAAGAAGAAAGGAAGAGT
TRRGMCX2	chr7	123,374,341	123,374,375	34	AAAAAAGAAGAAGAAGAAGA	GCTAAATTAAAGAAATGAGA	AGAAATATACC
TR3XXML7	chr4	44,898,285	44,898,397	112	TGAGACTGTATATATATATA	GCTCTTGTTGCCCAGGCTGG	TTTC,TATATATATATAAATATTTCTGTATTT
TRNR3T95	chr5	97,191,344	97,191,407	63	GACTAGTCCTTTTATCATTA	TAAGAATAGCTACTCCTGCT	TTG
TRD4FP2A	chr11	20,221,201	20,221,242	41	AGGAGTGAGCACACACACAC	ATTTTTAAGTTCTAGGGTAC	ACACACATATAAT
TRDRXYRN	chr1	242,115,652	242,115,694	42	AAAAATGTTTCAAACTCAAA	AAATCTTTCATTGAGTTAGG	TTTCT
TREQNKTQ	chr6	27,442,569	27,442,935	366	GTTCGAGGCTGCACTCCAGC	GGTCCAGGGGCTTGGCCCTC	GAAA
TR26Q399	chr2	6,247,060	6,247,100	40	AAAAAAAAAAAAAAAAAAAC	AAAACATATTAAAAATTTTC	AGT
TRHH7Z2V	chr5	147,214,495	147,214,692	197	AAGTAATACTTCATAAATAT	GCACCCAGGCTGGAGTGCAG	TCTT
TRWB35VM	chr22	41,743,999	41,744,448	449	GATTCTCCTGCCTCAGCCTC	AGCGTGAGCCACCATGCCCA	CAC,TAATTTTAG,GATCTCCTGACCTTGT
TR2ETYEE	chr4	34,073,033	34,073,093	60	GCAACAGAGAGAGACTCTGT	ATGTCCCAGTCTCTTATTTT	CAAAAAACAAA
TRU2ZFJD	chr6	37,977,768	37,977,984	216	CTTTTATTTCTGGTTTGCTG	GCAGTGGCTTGATCTCAAGC	TTCC,AATG
TRQZAH3Z	chr2	25,184,804	25,185,846	1,042	ATGAGAATTCAATGAGGTCT	TGGGCGCAGAGGCTCACGCC	TTTTTTTTGTTTGTT,AT,TCTGGC,TGCCT,ATTTTTAGT,GGGCT
TR4H8ZLD	chr10	10,245,002	10,245,074	72	ACTACCCTCCAGTCTGGGTG	AAAGAATTGACAAAAAAAAA	AAACA
TRMLETJE	chr6	85,771,524	85,771,585	61	CTTAGTTTTACTTTGGCTAT	TTAATATGCTACCATTATCC	AATTTT
TR9UJ5B4	chr5	20,509,573	20,509,615	42	GTGCGTGCCACCACGCCCAG	TCACCATGTTGGCCAGGATA	TTTT
TRVNVRMH	chr1	103,313,385	103,313,472	87	AGATGAAACAAAAGGGAAAC	GTAGGATGTTTACTAAGAAG	AAGA
TRVBMNNR	chr6	57,791,694	57,792,141	447	ATACCCAAGTTACAAAACAT	CTAGAAAATTGGAAAATCTG	AAGAAG,AAACAGA
TRV2SWY3	chr16	75,135,289	75,135,390	101	TACAGTGGAACGTTAATCAG	TCAGTCTCAAAAGACTATAT	CACAAAAAGACAAAGAAGAACCTTAA
TRPESLS7	chr22	41,552,625	41,552,713	88	TGAGACTACAGGCGTGCACC	CCAGGCTGGAGTATAATAGT	ATTTATTATTTATTATATTT
TRBL6GBE	chr7	150,006,160	150,006,237	77	TGGGAACCTAAAGGCTTCCC	CCAGGCTGGAGTGCAGTGGC	ATTT
TRSHQSXH	chr19	23,874,867	23,874,941	74	CAGTCTGTGCTCTGGTGTTG	CTGCAAACTTCACCTCCTGG	ATTT
TRCFM5AV	chr1	109,892,940	109,893,015	75	GCAAGGAGCCAAGACAGACG	ATTCCCCACATTGTCTTCTC	CTC,CAG
TRR49892	chr11	111,177,948	111,177,997	49	TATTAATGTTAGTATAACCC	TGAGATGGAGTCTCACTCTG	CCTGCT
TR9SVVDR	chr8	3,670,443	3,671,298	855	TAATAAACTCCCCTTTATAT	CCTGATAAATGCTAACATTA	ATATATATATATGGG
TRWBP7QD	chr1	248,645,383	248,645,683	300	TGTGGATGTGCAGGGGAATG	ATAAACACAATGCACTCATT	GGTGA,GTG,GGTGAGGCGAGATGA,TGGCCCATCCAGTCCACCCTACTAACGCTATGGAAGAGGAAATGGAGAGTGAGGGCATGGAGGATTACACAGGAACAGCAGTGGTGAGGTGAGATGAGCTGAGGCGAGCTGAGGT
TRY2TNTQ	chr6	144,132,064	144,132,123	59	GCGATACCTGTCTCTCAAAA	CCGGCTATTTCTTTGGAATA	AAT
TRDG83UH	chr20	35,420,193	35,420,242	49	ATTCTCCCTGGGTGTCTGTC	ATGGAGTCTCATTGTGACAC	TCTCT
TRKL2WPU	chr11	120,177,936	120,178,286	350	AATCTAGGGAGAGAGAGAAG	CAGCATAGGCTCTGGAGCCA	AGGA,CA,ATGCACACACATG,CATG
TRQTKH2R	chr16	16,706,240	16,706,425	185	AGAGGCCGATAGGCGTTTTT	TTTATATGCCAGACATTGTT	GGAA,TTCA,TT
TRT44HN2	chr19	56,744,802	56,745,895	1,093	AAGGCCAAAATTGACAAATG	TATCTAGAATTTACAAGGAA	TGCAAGCAAAAGAAACTATCGTCAGAGTGAACAGGCGACCCACAGAATGGGAGGAAATTTT
TR54PV5Q	chr7	68,256,425	68,256,506	81	TTTGCAAAGGTGGTTTCAGT	CCGATGTACATAGTGAACTA	TCTCCCTC,CTTT
TR7ZQWKR	chr4	7,973,078	7,973,142	64	TGAGCTGCTCCCCTTGCTGT	TCCAGGAAGAATAAAGTGCA	GTGTAGG
TRLRKQHM	chr11	8,977,724	8,979,046	1,322	CGTGATCTTGGCTCGCTACA	GCCATGATGACAATGGCGGT	CTCTGCCCGGCCGCCACCCCGTCTGGGAAGTGAGGAGCGT,GCCC,GGGA,ACCTCC,CAGCCCCCCACCCGGC,CAGCCCCCCGCCCGGC
TRHQQEHJ	chr2	62,315,375	62,315,426	51	GACAGAGCAAGACTCCACCT	AGAAAAAGACGTATAATCTA	AGAAC
TRX3JUTM	chr4	154,169,426	154,169,603	177	GGTAATATCCCATTTTTTAC	TTTTACTTTGTTTTTTTTTT	TCCCC,CCTTCCCTTCTT
TRZPND3Z	chr22	24,611,489	24,612,264	775	ACTGCACTGTTTTGTTGTTT	TGGTTAGGAGACAATTTCTT	CTAT,TG,GTGATCCTCCCACCTCAGCCTCCAAAGTGCTGGGATTACAGGTGTGAGCCACATGCCCAGCTAATTATGGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTAG,ATTTTTAGT,ACCTCC
TRSSXCMY	chr7	102,648,320	102,648,528	208	AAATGCATCTTATACCTTGA	TGCCCAGGCTAGAGTGCAAT	GT,TGTA
TRLMQEQ7	chr11	89,983,312	89,984,083	771	TTCTTTCTACACAGACACAG	GACTGCAATCTCGGCTCTTT	CACTTCCCAGACGGGGCGGCCGGGCAGAGGCGCTCCT,GGGCG,CGGGA,CCTC,TTCCCCCC
TRKE8WQB	chr19	7,258,880	7,259,230	350	CACATGTTGGCAGGGGCAAA	ACTTCCCGCAATGACATCTA	TTCC
TRL2T65D	chr2	46,023,118	46,023,135	17	AAAAAAAAAAAATCATCTAT	TGACTTGAGAGCTTTGTCAT	ATAG
TRBB26EQ	chr7	158,729,054	158,729,847	793	GTGCTGGGGAGAGGAGAGGA	GTGTAGGGGCCGTCTGTGGA	GAGGAGCAAGTGTGGAGGTGGGGGGGGAGGAGCAAGTGTGGAGGTGCTGGGGG,GGA,GTGGAG,GGTG
TRXYBQPG	chr13	63,068,936	63,069,060	124	TTGCATAGTTGCCAGGTTGA	TTTTTGAGACGGAGTCTCGC	AC,AT,TG
TRNK74HC	chr16	28,688,861	28,688,927	66	CTGGGCTCTCTCCCTCACCC	TGAGACAGAGTCTCCCTCTG	TTTGTGTG
TRPG2W5X	chr16	18,725,323	18,726,265	942	GAAAGAAGAAAAAAAGAAAA	AAATCATAACAATGAACCAA	AGAGGG,GTG,AAAAATAAATAAT
TR88EG8R	chr4	142,263,614	142,263,710	96	AATATTAGTGAGGAAAATAG	AAATAATGCAGAGAAAGGCG	AT,AACAATG
TRFZ3VF3	chr19	52,530,639	52,531,542	903	ATCACTGCATGCCAGGCTGG	ACACGCATGACCAAATTCTC	AATA,AAAG,CAAAAAAA
TRWT38GS	chr4	32,770,191	32,770,359	168	GCGCCACTGCACTCCAGCTG	GTTGTGCATAGCATCAACAA	AAAG,ATAA
TR2HJDQ9	chr1	27,131,589	27,132,002	413	AAGCCCTGTCTCTTCTCAAA	GCTTCTTAATCCTCACAACT	AT,AAAAAG,GC,CCCTATAAT
TRAJQRED	chr12	132,691,933	132,695,395	3,462	GATTAGTAGCAACGCACACA	GGACATGTCTGATGATTCAT	CCCTTGCCAGTTAGTTAGTGAGCT,AGTT,TTAG
TRVCKDU2	chr4	37,143,844	37,143,883	39	CAATATAAATTCTTCCAATC	TTTTTTTTAGTGTTCTCTTC	CATTAA
TR3T22LQ	chr16	23,725,125	23,726,107	982	TAGCTGACTAAAGGCCATTG	AGCGAGTCCCTGTCTCAAAA	AC,AT,TAAA,AAAAC,TGGTGGC,TGGA

End of preview. Expand in Data Studio

No dataset card yet

Downloads last month: 102