Datasets:

yousefjan
/

PSL498_pegRNA_efficiency

Unnamed: 0 int64	DeepSpCas9 float64	ED_pos int64	ED_len int64	type_sub int64	type_ins int64	type_del int64	PBS_len int64	RTT_len int64	RHA_len int64	ext_len int64	WTS_GC float64	PBS_GC float64	RTT_GC float64	RHA_GC float64	spacer_GC float64	ext_GC float64	WTS_Tm float64	PBS_Tm float64	RTT_Tm float64	RHA_Tm float64	spacer_Tm float64	ext_Tm float64	PBS_MFE float64	RTT_MFE float64	spacer_MFE float64	ext_MFE float64	ext_U float64	protoS_U float64	E float64
0	40.347275	26	3	0	1	0	10	36	8	46	53.191489	50	55.555556	0	65	54.347826	144	80	62	0	66	142	-2.2	0	-1.8	-12.2	18.918919	25	0.258732
1	70.152237	10	1	0	1	0	11	15	5	26	72.340426	54.545455	86.666667	0	65	73.076923	162	90	0	0	66	90	-3.5	0	-4.9	-5.1	5.405405	10	5.090909
2	37.935577	5	1	0	1	0	13	16	11	29	70.212766	69.230769	68.75	66.666667	65	68.965517	160	98	0	10	66	98	-8.8	0	-6.7	-7.2	6.756757	15	11.649072
3	54.988319	6	1	1	0	0	16	14	8	30	59.574468	68.75	35.714286	66.666667	70	53.333333	150	92	0	10	68	92	-1.2	0	-3.2	-4.2	13.513514	5	4.2186
4	38.965	5	1	1	0	0	9	10	5	19	74.468085	66.666667	80	80	70	73.684211	164	30	36	18	68	66	0	0	-4	-2.1	26.315789	25	4.304905
5	53.030586	8	1	0	1	0	12	10	2	22	55.319149	41.666667	80	0	40	59.090909	146	70	0	0	56	70	-1.3	0	-2.9	-1.8	10.810811	20	0
6	16.802761	8	1	1	0	0	16	33	25	49	51.06383	68.75	45.454545	60	60	53.061224	142	112	38	64	64	150	-8.1	0	-4.4	-11.1	20.27027	15	0
7	52.689045	18	1	0	0	1	8	21	4	29	68.085106	62.5	71.428571	0	65	68.965517	158	98	0	0	66	98	-8.7	0	-1	-6.3	5.405405	20	3.041825
8	46.22398	22	2	1	0	0	13	33	10	46	63.829787	69.230769	63.636364	50	70	65.217391	154	108	44	6	68	152	-6.7	-0.3	-6.2	-15.6	16.216216	10	0
9	13.20981	7	1	1	0	0	7	24	17	31	42.553191	28.571429	62.5	0	20	54.83871	134	96	0	6	48	96	-9	0	0	-5.2	6.756757	55	0
10	22.751633	2	1	0	1	0	15	5	3	20	59.574468	60	40	0	55	55	150	62	0	0	62	62	-3.6	0	-2.9	-0.1	4.054054	30	0.042735
11	67.512672	7	1	0	0	1	13	11	3	24	57.446809	53.846154	81.818182	66.666667	55	66.666667	148	40	40	10	62	80	0	0	-3.7	-8.7	16.666667	21.052632	8.705937
12	55.242188	20	2	0	1	0	11	25	4	36	55.319149	54.545455	48	0	55	50	146	108	0	0	62	108	-6.8	0	-0.3	-5.6	8.108108	25	0
13	35.491238	20	1	1	0	0	7	24	4	31	61.702128	71.428571	62.5	0	75	64.516129	152	102	0	0	70	102	-8.3	0	-2	-9.2	6.756757	20	0.834106
14	23.402267	21	1	0	1	0	3	22	1	25	65.957447	100	68.181818	0	70	72	156	86	0	0	68	86	-10	0	-3.4	-8.2	4.054054	25	0
15	71.561729	4	1	1	0	0	10	7	3	17	70.212766	70	85.714286	0	80	76.470588	160	60	0	0	72	60	-1.4	0	-5	-5.5	4.054054	5	7.625943
16	39.654827	12	1	0	1	0	3	22	10	25	42.553191	33.333333	40.909091	0	45	40	134	70	0	0	58	70	-6.8	0	0	-0.2	2.702703	40	0
17	18.36344	1	1	1	0	0	12	9	8	21	68.085106	66.666667	77.777778	0	70	71.428571	158	72	0	0	68	72	-4	0	-3	-4.1	2.702703	15	1.896342
18	60.396263	18	1	1	0	0	3	41	23	44	55.319149	33.333333	43.902439	60	60	43.181818	146	50	76	16	64	126	0	0	-1	-9.5	18.918919	15	0
19	70.503838	23	3	1	0	0	4	28	3	32	44.680851	25	53.571429	0	45	50	136	88	8	0	58	96	-1.1	0	-0.6	-4.2	8.108108	15	0
20	64.861397	30	1	1	0	0	4	43	13	47	53.191489	75	48.837209	0	60	51.06383	144	46	96	0	64	142	-1.6	-3.8	-4.9	-6.9	17.567568	10	0
21	43.27924	16	1	1	0	0	7	29	13	36	51.06383	42.857143	55.172414	0	55	52.777778	142	94	16	0	62	110	-2.6	0	-1.9	-5.8	10.810811	15	0.104603
22	38.197	5	1	1	0	0	15	15	10	30	36.170213	33.333333	53.333333	50	45	43.333333	128	40	46	30	58	86	0	0	0	0	36.666667	30	3.34579
23	48.644447	2	1	0	0	1	2	10	9	12	65.957447	100	90	0	65	91.666667	156	46	0	0	66	46	-2.1	0	-3.3	-3.9	1.351351	10	0
24	54.878922	1	1	1	0	0	8	3	2	11	63.829787	62.5	100	0	60	72.727273	154	38	0	0	64	38	-0.4	0	-0.6	-1.9	1.351351	25	0.613358
25	65.803444	2	1	0	1	0	11	8	6	19	76.595745	90.909091	87.5	0	85	89.473684	166	72	0	0	74	72	-9.2	0	-5.7	-9.2	0	10	2.266783
26	66.081429	25	1	1	0	0	3	30	5	33	48.93617	66.666667	43.333333	0	50	45.454545	140	76	20	0	60	96	-2.2	0	-2.6	-4.1	13.513514	25	0
27	5.780496	12	1	1	0	0	13	28	15	41	53.191489	53.846154	53.571429	66.666667	50	53.658537	144	40	86	50	56	126	-0.8	-4.5	-1.8	-7.7	19.512195	36.842105	48.426279
28	14.569	5	1	1	0	0	13	12	7	25	70.212766	69.230769	75	71.428571	70	72	160	44	42	24	68	86	0	-2.3	-3.8	-6.9	12	15	9.263658
29	65.498207	20	1	1	0	0	15	37	17	52	55.319149	40	51.351351	45.454545	40	48.076923	146	94	60	32	56	154	-8.1	-0.2	0	-6.7	17.567568	30	0.840336
30	52.461494	1	1	1	0	0	13	5	3	18	57.446809	46.153846	60	100	50	50	148	38	16	12	62	54	0	0	-0.6	-1.2	27.777778	15.789474	15.91661
31	27.27282	26	2	0	1	0	16	37	10	53	44.680851	62.5	27.027027	80	55	37.735849	136	92	54	18	62	146	-6.4	-0.6	-4.8	-7.7	17.567568	35	0.2457
32	48.511486	3	3	0	0	1	12	7	5	19	59.574468	66.666667	42.857143	0	55	57.894737	150	60	0	0	62	60	0	0	-0.9	0	5.405405	25	0.067537
33	15.295747	3	3	0	1	0	17	19	14	36	59.574468	64.705882	57.894737	70	60	61.111111	150	116	0	34	64	116	-4.6	0	0	-6.1	8.108108	20	0
34	3.703306	4	1	1	0	0	10	9	5	19	48.93617	50	77.777778	0	35	63.157895	140	62	0	0	54	62	-3.7	0	0	-3.5	1.351351	50	2.537095
35	44.691978	6	1	1	0	0	13	10	3	23	48.93617	61.538462	80	100	55	69.565217	140	42	36	12	60	78	0	0	0	-0.4	13.043478	26.315789	35.540256
36	50.72657	9	1	0	1	0	8	32	23	40	59.574468	50	59.375	50	55	57.5	150	90	36	30	62	126	-3.6	0	-1.9	-5.3	16.216216	15	0
37	17.248146	13	1	0	1	0	15	14	1	29	72.340426	80	78.571429	0	80	79.310345	162	104	0	0	72	104	-12	0	-3.9	-7.5	4.054054	5	0
38	49.207932	12	1	0	0	1	17	19	8	36	57.446809	58.823529	57.894737	75	55	58.333333	148	114	0	14	62	114	-12.8	0	0	-6	6.756757	35	10.477941
39	31.597435	15	1	1	0	0	7	22	7	29	53.191489	57.142857	54.545455	0	45	55.172414	144	90	0	0	58	90	-6.9	0	-0.5	-4.8	6.756757	30	0
40	37.801868	8	1	0	0	1	14	8	1	22	48.93617	42.857143	37.5	0	45	40.909091	140	62	0	0	58	62	-1.7	0	-0.4	-3.3	6.756757	40	0.202347
41	54.704903	5	1	0	1	0	9	8	3	17	42.553191	33.333333	75	0	40	52.941176	134	52	0	0	56	52	-1.7	0	-1.7	-2.3	4.054054	25	0.06169
42	15.79653	3	1	1	0	0	10	15	12	25	57.446809	50	66.666667	100	45	60	148	80	0	4	58	80	-5.8	0	0	-5.5	4.054054	40	1.347909
43	64.468498	7	1	1	0	0	8	7	0	15	63.829787	62.5	42.857143	53.333333	55	53.333333	154	46	0	46	62	46	0	0	-1.3	0	6.756757	15	0.528076
44	67.715	5	1	1	0	0	9	20	15	29	63.829787	77.777778	75	73.333333	65	75.862069	154	32	70	52	66	102	0	-6.6	-0.9	-10.4	10.344828	10	6.819587
45	33.332512	19	1	0	1	0	7	31	12	38	61.702128	85.714286	45.16129	0	80	52.631579	152	94	22	0	72	116	-5.6	0	-1.9	-9.1	13.513514	5	1.077586
46	15.956026	18	1	1	0	0	7	22	4	29	48.93617	28.571429	45.454545	0	35	41.37931	140	82	0	0	54	82	-2.3	0	-0.7	-2.7	13.513514	30	0
47	67.572784	17	2	0	1	0	7	22	4	29	57.446809	71.428571	63.636364	0	65	65.517241	148	96	0	0	66	96	-3.4	0	-1.3	-5.6	8.108108	25	0
48	37.738	5	1	1	0	0	15	15	10	30	68.085106	66.666667	66.666667	70	65	66.666667	158	50	50	34	66	100	0	-0.3	-1.3	-3.4	23.333333	25	0.56926
49	17.322153	24	1	1	0	0	9	31	7	40	38.297872	22.222222	54.83871	0	30	47.5	130	88	30	0	52	118	-6	0	0	-6.1	17.567568	35	0
50	51.732925	1	1	1	0	0	17	9	8	26	51.06383	35.294118	77.777778	0	40	50	142	78	0	8	56	78	-7	0	0	0	2.702703	50	0.75776
51	26.210188	19	1	1	0	0	2	36	17	38	51.06383	50	47.222222	0	55	47.368421	142	58	54	0	62	112	0	-1.4	-1.7	-7.4	13.513514	25	0.229651
52	14.10942	9	1	1	0	0	13	13	3	26	51.06383	46.153846	61.538462	33.333333	45	53.846154	142	38	42	8	56	80	-0.8	0	0	-3.7	26.923077	21.052632	5.054535
53	47.970436	7	1	0	0	1	12	28	22	40	55.319149	66.666667	46.428571	61.538462	70	52.5	146	112	10	42	68	122	-2.7	0	-0.1	-4.6	14.864865	0	8.226833
54	42.55	12	4	0	1	0	13	23	7	36	53.191489	38.461538	73.913043	85.714286	45	61.111111	144	36	80	26	58	116	0	-4.1	-0.2	-5.3	22.222222	25	22.930164
55	57.554985	25	1	0	1	0	7	46	21	53	61.702128	28.571429	63.043478	28.571429	55	58.490566	152	44	124	18	62	168	0	-10.5	-2.3	-11.5	10.810811	20	0.906344
56	45.779572	16	1	0	1	0	7	17	1	24	65.957447	42.857143	64.705882	0	60	58.333333	156	76	0	0	64	76	-2.3	0	-3.4	-5	8.108108	25	0
57	50.351494	3	1	0	0	1	17	17	15	34	57.446809	64.705882	58.823529	54.545455	55	61.764706	148	110	0	34	62	110	-5.8	0	0	-3.1	12.162162	15	7.491857
58	30.644772	7	1	1	0	0	13	15	7	28	53.191489	61.538462	60	57.142857	55	60.714286	144	42	48	22	60	90	0	0	0	-3.4	10.714286	36.842105	48.081461
59	20.061367	13	1	1	0	0	8	17	4	25	55.319149	75	47.058824	0	55	56	146	78	0	0	62	78	-1.8	0	0	-1.3	6.756757	35	1.424501
60	71.105026	15	1	0	1	0	9	23	8	32	55.319149	33.333333	60.869565	0	50	53.125	146	98	0	0	60	98	0	0	-1.3	-0.5	14.864865	15	0.160901
61	62.852249	11	1	1	0	0	13	27	15	40	57.446809	46.153846	55.555556	46.666667	50	52.5	148	38	84	44	62	122	0	-3	-2.6	-12.1	30	10.526316	21.750674
62	51.965416	11	2	0	1	0	12	30	18	42	59.574468	58.333333	53.333333	55.555556	70	54.761905	150	110	20	28	68	130	-7	0	0	-7.1	13.513514	10	11.043566
63	49.076473	3	2	0	1	0	11	18	14	29	61.702128	63.636364	66.666667	50	60	65.517241	152	96	0	12	64	96	-9.7	0	-4.2	-5.4	4.054054	20	14.690451
64	38.045395	1	1	0	1	0	1	20	19	21	57.446809	100	55	0	55	57.142857	148	66	0	0	62	66	-2.1	0	0	-1.4	9.459459	25	0
65	46.650478	1	1	0	1	0	7	11	10	18	51.06383	57.142857	45.454545	0	55	50	142	54	0	0	62	54	0	0	-1.9	0	2.702703	35	10.578446
66	59.324829	14	1	1	0	0	13	25	10	38	68.085106	61.538462	68	60	70	65.789474	158	42	84	32	64	126	0	-3.6	-5.5	-10	26.315789	0	54.064574
67	57.751392	2	1	1	0	0	10	17	15	27	42.553191	40	47.058824	50	40	44.444444	134	78	0	12	56	78	-2.7	0	-0.7	-4.1	10.810811	15	0.741264
68	52.064713	26	1	0	1	0	9	34	8	43	40.425532	55.555556	38.235294	0	45	41.860465	132	80	42	0	58	122	-2.3	0	0	-5.6	12.162162	25	4.040404
69	31.784138	14	1	1	0	0	13	18	3	31	46.808511	46.153846	50	66.666667	45	48.387097	138	38	54	10	56	92	0	-0.5	-2.3	-4.1	22.580645	31.578947	58.666965
70	-0.669747	3	1	1	0	0	10	13	10	23	31.914894	20	61.538462	0	20	43.478261	124	66	0	0	48	66	0	0	-0.8	0	9.459459	55	0.04514
71	47.485844	8	2	0	1	0	14	26	17	40	63.829787	64.285714	65.384615	60	70	65	154	132	0	32	68	132	-8.1	0	-2.3	-6.7	8.108108	20	5.966387
72	50.327	5	1	1	0	0	13	12	7	25	63.829787	53.846154	83.333333	85.714286	55	68	154	40	44	26	62	84	0	-1.6	0	-3.3	20	25	6.183633
73	58.891697	6	1	1	0	0	10	21	15	31	59.574468	60	52.380952	50	65	54.83871	150	96	0	12	66	96	-1.6	0	0	-4.8	17.567568	10	7.197657
74	14.676658	15	2	0	0	1	4	17	3	21	40.425532	50	35.294118	0	50	38.095238	132	58	0	0	60	58	-3.9	0	-0.7	-5.5	8.108108	40	0
75	31.31312	19	1	1	0	0	9	22	3	31	46.808511	33.333333	50	0	40	45.16129	138	90	0	0	56	90	-9	0	0	-3.9	16.216216	20	0.343643
76	63.223396	8	3	0	1	0	13	21	10	34	61.702128	69.230769	52.380952	50	70	58.823529	152	44	64	30	62	108	0	-0.2	-2.1	-8.4	26.470588	5.263158	71.569122
77	44.195919	3	1	0	1	0	16	10	7	26	42.553191	37.5	60	0	40	46.153846	134	76	0	4	56	76	-5.9	0	0	-5.3	5.405405	35	9.887969
78	50.13335	3	1	0	0	1	4	16	14	20	76.595745	75	81.25	0	75	80	166	72	0	0	70	72	-2.5	0	-2.7	-0.7	2.702703	10	0.729147
79	29.761156	2	1	0	1	0	13	10	7	23	59.574468	69.230769	70	71.428571	65	69.565217	150	44	34	24	64	78	0	-0.3	-0.4	-0.3	8.695652	26.315789	80.22499
80	59.824	5	1	1	0	0	7	10	5	17	61.702128	71.428571	40	40	65	52.941176	152	24	28	14	66	52	0	0	-5.9	-0.7	11.764706	5	2.609966
81	57.059189	11	1	1	0	0	7	32	21	39	53.191489	42.857143	50	42.857143	50	48.717949	144	82	34	20	60	116	-3.6	0	-1.4	-6.3	12.162162	30	0.160772
82	31.066723	10	1	1	0	0	10	23	13	33	51.06383	30	65.217391	50	35	54.545455	142	102	0	6	54	102	-8.9	0	0	-7.5	12.162162	20	0
83	23.7	5	1	1	0	0	9	15	10	24	48.93617	33.333333	66.666667	70	40	54.166667	140	24	50	34	56	74	0	-1.3	-4.8	-3	20.833333	25	1.740003
84	60.3452	3	1	0	1	0	13	7	3	20	63.829787	61.538462	85.714286	100	60	70	154	42	26	12	64	68	0	0	-2.6	-3.7	15	15.789474	8.102768
85	48.090813	1	1	1	0	0	13	17	15	30	68.085106	53.846154	82.352941	86.666667	70	70	158	40	62	56	68	102	0	-1.7	-5.5	-6.3	20	10.526316	53.254018
86	61.612274	8	1	0	0	1	16	28	21	44	59.574468	68.75	53.571429	68.75	65	59.090909	150	130	10	54	66	140	-10.5	0	-7.5	-10.5	10.810811	25	0
87	49.378498	4	1	1	0	0	13	20	15	33	53.191489	53.846154	45	40	60	48.484848	144	40	58	42	58	98	0	-2.1	-1.5	-3.4	24.242424	26.315789	69.51232
88	42.942101	19	1	1	0	0	11	21	2	32	46.808511	36.363636	47.619048	0	40	43.75	138	92	0	0	56	92	-5	0	-2.2	-4.8	12.162162	40	0
89	67.607071	13	1	1	0	0	8	17	4	25	61.702128	62.5	70.588235	0	65	68	152	84	0	0	66	84	-4.6	0	-4.7	-1.3	2.702703	15	1.038062
90	38.580509	18	2	0	1	0	14	32	13	46	55.319149	50	62.5	50	50	58.695652	146	114	32	18	60	146	-10.4	0	-1.3	-8.5	10.810811	30	1.277139
91	14.071393	10	1	1	0	0	7	13	3	20	36.170213	57.142857	46.153846	0	40	50	128	60	0	0	56	60	-1.9	0	-0.1	-1.3	6.756757	20	0.591017
92	53.755146	2	3	0	1	0	12	11	7	23	68.085106	58.333333	63.636364	0	60	60.869565	158	74	0	0	64	74	-3.5	0	-3.6	-1.3	9.459459	10	0.3108
93	47.266994	1	1	0	0	1	9	5	5	14	65.957447	55.555556	100	0	55	71.428571	156	48	0	0	62	48	0	0	0	0	2.702703	20	0
94	39.97	0	3	0	1	0	13	6	3	19	44.680851	15.384615	83.333333	66.666667	35	36.842105	136	30	22	10	54	52	0	0	0	0	42.105263	40	0
95	48.182739	10	1	0	1	0	13	21	10	34	48.93617	38.461538	66.666667	70	50	55.882353	140	36	70	34	58	106	0	-7.6	-0.8	-12.7	26.470588	21.052632	80.835464
96	14.61	6	5	1	0	0	13	21	10	34	42.553191	30.769231	57.142857	30	50	47.058824	134	34	66	26	60	100	0	-2.9	0	-4.1	17.647059	20	44.451736
97	62.881565	8	1	1	0	0	2	24	16	26	61.702128	50	62.5	0	75	61.538462	152	84	0	0	70	84	-2.5	0	-3	-1.1	9.459459	5	0
98	36.052368	15	1	1	0	0	10	32	17	42	48.93617	30	50	33.333333	40	45.238095	140	86	36	16	56	122	-4.3	-1.3	-0.1	-11.2	17.567568	20	0
99	44.577805	16	1	0	0	1	9	19	4	28	65.957447	33.333333	73.684211	0	50	60.714286	156	90	0	0	60	90	-9.1	0	0	-7.6	5.405405	35	0.041981

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