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ITK-SNAP Sample Data

Sample image datasets for ITK-SNAP. Each folder holds one or more image volumes and an ITK-SNAP workspace (.itksnap) that loads them with layer names and labels.

Folder Contents Source
brain_tumor_mri/ Multi-modal brain tumor MRI (FLAIR, T1, T1C, T2) with ground-truth segmentation BRATS 2012
brain_diffusion_mri/ T1 MRI with DTI-derived maps (tensor, FA, trace, principal direction) DTI-TK sample data
mri_tutorial/ 3D brain MRI and segmentation from the SNAP 2.x tutorial ITK-SNAP
dss_ashs_test/ MPRAGE and TSE MRI for testing the ASHS distributed segmentation service ITK-SNAP DSS
govalve_root/ 3D echocardiography image with aortic root segmentation (frame 4) GoValve-Root

Licenses

The datasets come from different sources and carry their own terms. See the README in each folder.

  • brain_tumor_mri/: Creative Commons Attribution-NonCommercial 3.0 (CC BY-NC 3.0). Works using the data must credit the MICCAI 2012 Challenge on Multimodal Brain Tumor Segmentation (see the folder README).
  • brain_diffusion_mri/: DTI-TK sample data, provided solely to demonstrate DTI-TK and ITK-SNAP. Other use is prohibited.
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