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GSE1 | nhgri_melanoma_class this series represents group of cutaneous malignant melanomas and unrelated controls which were clustered based on correlation coefficients calculated through comparison of gene expression |
GSE2 | cerebellar development the affymetrix genechip mu11k was used to analyze the gene expression profile in developing mouse cerebellum two genechips per e18 p7 p14 p21 and p56 to assist in the understanding of the genetic basis of cerebellar development in mice |
GSE3 | renal cell carcinoma differential expression we investigated the changes in gene expression accompanying the development and progression of kidney cancer using 500 element complementary dna arrays we measured expression profiles for paired neoplastic and non cancerous renal epithelium samples from individuals using an ... |
GSE4 | diurnal and circadian regulated genes in arabidopsis plants respond to day night cycling in number of physiological ways at the mrna level the expression of some genes changes during the hr period to identify novel genes regulated in this way we used microarrays containing 521 arabidopsis expressed sequence tags repres... |
GSE5 | global profile of germline gene expression in elegans we used dna microarrays to profile gene expression patterns in the elegans germline and identified germline enriched transcripts that define three groups the sperm enriched group contains an unusually large number of protein kinases and phosphatases the oocyte enric... |
GSE6 | genetic diversity among helicobacter pylori strains helicobacter pylori colonizes the stomach of half of the world population causing wide spectrum of disease ranging from asymptomatic gastritis to ulcers to gastric cancer although the basis for these diverse clinical outcomes is not understood more severe disease is a... |
GSE7 | tryptophan metabolism response in coli dna microarray analysis of gene expression in response to physiological and genetic changes that affect tryptophan metabolism in escherichia coli |
GSE8 | topoisomerase function in coli replication fork movement analysis of topoisomerase function in bacterial replication fork movement use of dna microarrays |
GSE9 | uv exposure in wild type and sos deficient coli uv irradiation of the wild type and lexa mg1655 escherichia coli cells were irradiated at 2x10 cells ml in the davis medium by germicidal lamp nm 66j sec set also includes respective controls for unirradiated cells collected at and min time points comparison between lexa ... |
GSE10 | eye sage human retinal and rpe sage libraries |
GSE11 | nod model of type diabetes we used high density oligonucleotide arrays to measure the relative expression levels of 000 genes and ests in the nod mouse murine model of t1d and other autoimmune conditions four nod derived diabetes resistant congenic strains and two nondiabetic control strains owing to the importance of ... |
GSE12 | group1 replicate group for gse11 all samples were processed in parallel to minimize any variation introduced during target preparation |
GSE13 | murine bone marrow cell precursors affymetrix genechip derived gene expression profiles of flow sorted murine cell precursors ex vivo isolated rna amplified |
GSE14 | cancer genome anatomy project cgap sage libraries this series represents the cancer genome anatomy project sage library collection libraries contained herein were either produced through cgap funding or donated to cgap |
GSE15 | group2 replicate group for gse11 all samples were processed in parallel to minimize any variation introduced during target preparation |
GSE16 | microarray based cgh in human cancer cell lines this series represents the data set from the paper assembly of microarrays for genome wide measurement of dna copy number appearing in nat genet nov 3 4 and it web supplement |
GSE17 | young and old muscle comparison rna was pooled from vastus lateralis biopsies obtained from younger 24 yr and older 77 yr men healthy subjects with no neuromuscular disease |
GSE18 | yeast stress response we explored genomic expression patterns in the yeast saccharomyces cerevisiae responding to diverse environmental transitions dna microarrays were used to measure changes in transcript levels over time for almost every yeast gene as cells responded to temperature shocks hydrogen peroxide the super... |
GSE19 | sbf mbf genomic distribution the first experiments are ordered according to the legend in figure of the published paper experiment is the gene expression profile of the swi4 deletion strain compared to the wild type strain |
GSE20 | manipulation in phospate levels the arrays were used to study the effects of modifying phosphate levels in yeast either through mutation or chemical manipulation |
GSE21 | snf swi mutants of cerevisiae the saccharomyces cerevisiae snf swi complex has been previously demonstrated to control transcription and chromatin structure of particular genes in vivo and to remodel nucleosomes in vitro we have performed whole genome expression analysis using dna microarrays to study mutants deleted f... |
GSE22 | alpha factor block release these data are from time series where yeast were arrested in alpha factor then the alpha factor was washed out and the cells were release into fresh medium samples were taken every minutes as the cells went through the cell cycle |
GSE23 | cdc15 block release yeast cells were blocked in telophase using cdc15 temperature senstive mutant at restrictive temperature the culture was then shifted to permissive temperature 25oc and released into the cell cycle samples were then taken during the course of almost three full cell cycles |
GSE24 | elutriation time course small g1 daughter yeast cells were isolated by centrifugal elutriation they were then released into yep ethanol and followed through one cell cycle with samples being taken every minutes |
GSE25 | cyclin overexpression yeast cells were arrested either in g1 for cln3 overexpression or in g2 for clb2 overexpression the cyclin was then induced and samples were taken |
GSE26 | copper regulon in cerevisiae in saccharomyces cerevisiae copper ions regulate gene expression through the two transcriptional activators ace1 and mac1 ace1 mediates cu induced gene expression in cells exposed to stressful levels of copper salts whereas mac1 activates subset of genes under copper deficient conditions dn... |
GSE27 | sporulation in yeast diploid cells of budding yeast produce haploid cells through the developmental program of sporulation which consists of meiosis and spore morphogenesis dna microarrays containing nearly every yeast gene were used to assay changes in gene expression during sporulation at least seven distinct tempora... |
GSE28 | diauxic shift exploring the metabolic and genetic control of gene expression on genomic scale in yeast |
GSE29 | adaptive evolution in yeast saccharomyces cerevisiae population was cultured for many generations under conditions to which it is not optimally adapted these experiments were designed to investigate adaptive evolution under natural selection |
GSE30 | multiplex three dimensional brain gene expression mapping in mouse model of parkinson disease voxelation is novel technology designed to produce high throughput three dimensional imaging of gene expression patterns in the brain in these experiments mouse brains were dissected into voxels or cubes by cutting serial coro... |
GSE31 | sage profiles from cultured keratinocytes and human epidermis sage libraries from cultured differentiated keratinocytes and human epidermis both normal and affected by actinic keratosis |
GSE32 | heatshock otd otx2 the homeobox genes of the orthodenticle otd otx family play conserved roles in embryogenesis of the head and brain gene replacement experiments show that the drosophila otd gene and orthologous mammalian otx genes are functionally equivalent in that overexpression of either gene in null mutants of dr... |
GSE33 | e coli response to mmc changes in gene expression after treatment of coli cultures with mitomycin were assessed using gene array technology unexpectedly large number of genes nearly of all genes displayed significant changes in their expression level analysis and classification of expression profiles of the correspondi... |
GSE34 | prp4 temperature shift prp4 and wt strains were grown at to a600 of 0 then an equal volume of media was added to bring the temperature to both strains were allowed to grow at and samples were taken at before shift 15 60 and mins after shift to restrictive temperature |
GSE35 | non essential mrna processing factors set of experiments done on yeast deletion strains of various non essential mrna processing factors |
GSE36 | ub oc differentiation this study explores the profiles of genes expressed during conditional differentiation of inner ear hair cell precursors in vitro the cell line ub oc was derived from mouse embryonic organs of corti rivolta et al proc soc lond 1595 1998 and it can be induced to differentiate upon temperature shift... |
GSE37 | byxwild_40 expression analysis of f1 haploid segregants from cross between by4716 isogenic to s288c and wild isolate collected by mortimer each segregant sample was subjected to dye swap pair of arrays all arrays used the same pool of reference by4716 sample in sample titles by alone signifies the reference sample and ... |
GSE38 | by_wild_parents expression analysis of by4716 isogenic to s288c and wild isolate collected by mortimer each strain was grown in culture independent times and rna from each culture was isolated each of these rna samples was subjected to dye swap pair of arrays except the rm11 sample which only got one array all arrays u... |
GSE39 | mefloquine treatment of ng108 rat neuronal cells this data series describes expression data for eight paired control and treated cell cultures obtained on independent occasions ng108 rat neuronal cell cultures were exposed to either 25 dmso control or ng ml mefloquine treated for two hours |
GSE40 | clontech rna samples series of experiments used to compare clontech spleen plya clontech liver plya and clontech universal rna for microarrays on our available human array printed on amersham type slides |
GSE41 | effects of estrogen effects of estrogen on global gene expression identification of novel targets of estrogen action |
GSE42 | p19 embryonic carcinoma ec cells induced to form cardiomyocytes in vitro sage identification of differentiation responsive genes in p19 embryonic cells induced to form cardiomyocytes in vitro |
GSE43 | antibody arrays figure protein microarrays for highly parallel detection and quantitation of specific proteins and antibodies in complex solutions |
GSE44 | antibody arrays figure protein microarrays for highly parallel detection and quantitation of specific proteins and antibodies in complex solutions |
GSE45 | antibody arrays figures 4 and protein microarrays for highly parallel detection and quantitation of specific proteins and antibodies in complex solutions |
GSE46 | antibody arrays figure 10x fcs protein microarrays for highly parallel detection and quantitation of specific proteins and antibodies in complex solutions |
GSE47 | antibody arrays figure 100x fcs protein microarrays for highly parallel detection and quantitation of specific proteins and antibodies in complex solutions |
GSE48 | secreted and membrane associated genes large scale identification of secreted and membrane associated gene products using dna microarrays |
GSE49 | dna copy number changes gene amplifications and deletions frequently contribute to tumorigenesis characterization of these dna copy number changes is important for both the basic understanding of cancer and its diagnosis comparative genomic hybridization cgh was developed to survey dna copy number variations across who... |
GSE50 | antibody array figures protein microarrays for highly parallel detection and quantitation of specific proteins and antibodies in complex solutions |
GSE51 | hippocampus replicate samples hippocampus gene expression experiments |
GSE52 | ume6 regulon the ume6 transcription factor in yeast is known to both repress and activate expression of diverse genes during mitotic growth and meiotic development to obtain more complete profile of the functions regulated by this protein microarray analysis was used to examine transcription in wild type and ume6 delet... |
GSE53 | human mammary epithelium and breast cancer distinctive gene expression patterns in human mammary epithelial cells and breast cancers cdna microarrays and clustering algorithm were used to identify patterns of gene expression in human mammary epithelial cells growing in culture and in primary human breast tumors cluster... |
GSE54 | stresses induce gene expression in arabidopsis uv light and gamma ray treated plantlet |
GSE55 | serum stimulation of fibroblasts experiment set the transcriptional program in the response of human fibroblasts to serum serum was added to fibroblasts and samples were taken |
GSE56 | serum stimulation of fibroblasts with cycloheximide the transcriptional program in the response of human fibroblasts to serum serum was added to fibroblasts in the presence of cycloheximide |
GSE57 | serum stimulation of fibroblasts controls the transcriptional program in the response of human fibroblasts to serum control group |
GSE58 | serum stimulation of fibroblasts the temporal program of gene expression during model physiological response of human cells the response of fibroblasts to serum was explored with complementary dna microarray representing about different human genes genes could be clustered in groups on the basis of their temporal patte... |
GSE59 | human cancer cell lines we used cdna microarrays to explore the variation in expression of approximately 000 unique genes among the cell lines used in the national cancer institute screen for anti cancer drugs classification of the cell lines based solely on the observed patterns of gene expression revealed corresponde... |
GSE60 | diffuse large cell lymphoma diffuse large cell lymphoma dlbcl the most common subtype of non hodgkin lymphoma is clinically heterogeneous of patients respond well to current therapy and have prolonged survival whereas the remainder succumb to the disease we proposed that this variability in natural history reflects unr... |
GSE61 | molecular portraits of human breast tumors set of surgical specimens of human breast tumors from different individuals using complementary dna microarrays representing 102 human genes gene expression variation patterns within this set provided distinctive molecular portrait of each tumor twenty of the tumors were sampl... |
GSE62 | mrnas translated at eif4f identification of eukaryotic mrnas that are translated at reduced cap binding complex eif4f concentrations using cdna microarray although most eukaryotic mrnas need functional cap binding complex eif4f for efficient end dependent scanning to initiate translation picornaviral hepatitis viral an... |
GSE63 | brain after ischemia and antioxidant catalytic antioxidant aeol attenuates expression of inflammatory genes in stroke |
GSE64 | insulin sensitive muscle sample pool muscle sample pool from insulin sensitive subjects |
GSE65 | insulin sensitive muscle sample pool muscle sample pool from insulin sensitive subjects |
GSE66 | insulin sensitive muscle sample pool muscle sample pool from insulin sensitive subjects |
GSE67 | insulin sensitive muscle sample pool muscle sample pool from insulin sensitive subjects |
GSE68 | insulin sensitive muscle sample pool muscle sample pool from insulin sensitive subjects |
GSE69 | insulin resistant muscle sample pool muscle sample pool from insulin resistant subjects |
GSE70 | insulin resistant muscle sample pool muscle sample pool from insulin resistant subjects |
GSE71 | insulin resistant muscle sample pool muscle sample pool from insulin resistant subjects |
GSE72 | insulin resistant muscle sample pool muscle sample pool from insulin resistant subjects |
GSE73 | insulin resistant muscle sample pool muscle sample pool from insulin resistant subjects |
GSE74 | embryo development of medicago truncatula early stage of embryo development from leaf derived embryogenic callus of truncatula |
GSE75 | fvb benchmark set for cardiac development maturation and aging the affymetrix genechip mgu74av1 was used to analyze expression profiles of mice at different developmental stages to monitor changes in cardiac gene expression over time more information about this model may be obtained at |
GSE76 | pressure overload induced cardiac hypertrophy aortic banding is an excellent model system to evaluate the process of development of left ventricular hypertrophy in response to hemodynamic stress the affymetrix genechip mgu74av1 was used to analyze expression profiles of mice at different time points after surgical inte... |
GSE77 | exercised induced hypertrophy the affymetrix genechip mgu74av2 was used to analyze expression profiles of mice that had cardiac hypertrophy induced by swimming training more information of this model can be obtained at |
GSE78 | congenital heart disease in csx nkx2 mutant embryos we have developed gene targeted mice with deletion of nkx2 embryos were isolated at embryonic day 5 and the middle third containing the heart was run on affymetrix mu11ka and mu11kb arrays for more information about this model see |
GSE79 | lager beer fermentation time course the dynamics of the saccharomyces carlsbergensis brewing yeast transcriptome during production scale lager beer fermentation |
GSE80 | normal human muscle rna from vastus lateralis of healthy young 31 year old and older 77 year old men signal data normalized to mean intensity of over all probes sets analysis done with affymetrix microarray suite 0 software |
GSE81 | ngs_mouse_liver replicate hydridizations with mouse liver mrna |
GSE82 | ngs_mouse_spleen replicate hybridizations using mouse spleen mrna |
GSE83 | cold stress in sugarcane exp1 tropical and subtropical plants are generally sensitive to cold and can show appreciable variation in their response to cold stress when exposed to low positive temperatures using nylon filter arrays we analyzed the expression profile of expressed sequence tags ests of sugarcane saccharum ... |
GSE84 | cold stress in sugarcane exp2 tropical and subtropical plants are generally sensitive to cold and can show appreciable variation in their response to cold stress when exposed to low positive temperatures using nylon filter arrays we analyzed the expression profile of expressed sequence tags ests of sugarcane saccharum ... |
GSE85 | wild type and aire murine meduallary thymic epithelial cells mice used were b6 f2 5 weeks of age either wild type or with both copies of the autoimmune regulator gene aire genbank af079536 disrupted thymi from five of these mice of both sexes were removed and pooled after collagenase dispase digestion density gradient ... |
GSE86 | comparison of dorsal threshold outputs whole genome analysis of dorsal ventral patterning in the drosophila embryo |
GSE87 | heat shock experimental replicates heat stress experiments imposed on buchnera aphidicola within intact schizaphis graminum hosts note normalized values in geo are not those derived from intensive analyses described in paper please see wilcox et al for description |
GSE88 | bladder tumour recurrence prediction expression profiling of superficial bladder tumours to delineate the expression pattern differences between non recurring and recurring tumours |
GSE89 | bladder tumour stage classification bladder tumours used to construct tumour stage classifier |
GSE90 | expression profiling by p53 status human colorectal carcinoma derived cell lines p53 at and hrs after growth arrest |
GSE91 | effect of dietary oils on hippocampus and liver gene expression dietary effects of arachidonate rich fungal oil and fish oil on murine hepatic and hippocampal gene expression |
GSE92 | proteomic view of the plasmodium falciparum life cycle the completion of the plasmodium falciparum clone 3d7 genome provides basis on which to conduct comparative proteomics studies of this human pathogen here we applied high throughput proteomics approach to identify new potential drug and vaccine targets and to bette... |
GSE93 | wing imaginal disc spatial expression wing imaginal discs were dissected to generate body wall and wing hinge fragments targets from three biological replicates of each were generated and the expression profiles were determined using affymetrix drosophila genechip arrays comparisons between the sample groups allow the ... |
GSE94 | life cycle of drosophila melanogaster molecular genetic studies of drosophila melanogaster have led to profound advances in understanding the regulation of development here we report gene expression patterns for nearly one third of all drosophila genes during complete time course of development mutations that eliminate... |
GSE95 | gene expression analysis reveals chemical specific profiles the application of gene expression profiling technology to examine multiple genes and signaling pathways simultaneously promises significant advance in understanding toxic mechanisms to ultimately aid in protection of public health public and private efforts i... |
GSE96 | large scale analysis of the human transcriptome high throughput gene expression profiling has become an important tool for investigating transcriptional activity in variety of biological samples to date the vast majority of these experiments have focused on specific biological processes and perturbations here we have g... |
GSE97 | large scale analysis of the mouse transcriptome high throughput gene expression profiling has become an important tool for investigating transcriptional activity in variety of biological samples to date the vast majority of these experiments have focused on specific biological processes and perturbations here we have g... |
GSE98 | zzmex67 co iped rna vs zz co iped rna zzmex67ip_v_zzip comparison of cdna from rna iped with zzmex67 to that from rna co iped with zz tag alone control ip |
GSE99 | zzyra1 co iped rna vs zz co iped rna zzyra1ip_v_zzip comparison of cdna from rna iped with zzyra1 to that from rna co iped with zz tag alone control ip |
GSE100 | zzmex67 co iped rna vs total rna zzmex67ip_v_totalrna comparison of cdna from rna iped with zzmex67 to that from total rna resulting analysis gives mex67 binding level relative to total abundance for each mrna |
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- no-annotation languages: -English All data pulled from Gene Expression Omnibus website. tab separated file with GSE number followed by title and abstract text.
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