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SOURCE: Biology
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1. Preface
2. The Chemistry of Life
1. The Study of Life
1. Introduction
2. The Science of Biology
3. Themes and Concepts of Biology
2. The Chemical Foundation of Life
1. Introduction
2. Atoms, Isotopes, Ions, and Molecules: The
Building Blocks
3. Water
4. Carbon
3. Biological Macromolecules
1. Introduction
2. Synthesis of Biological Macromolecules
3. Carbohydrates
4. Lipids
5. Proteins
6. Nucleic Acids
3. The Cell
1. Cell Structure
1. Introduction
2. Studying Cells
3. Prokaryotic Cells
4. Eukaryotic Cells
5. The Endomembrane System and Proteins
6. The Cytoskeleton
7. Connections between Cells and Cellular Activities
2. Structure and Function of Plasma Membranes
1. Introduction
2. Components and Structure
3. Passive Transport
4. Active Transport
5. Bulk Transport
3. Metabolism
1. Introduction
2. Energy and Metabolism
3. Potential, Kinetic, Free, and Activation Energy
4. The Laws of Thermodynamics
5. ATP: Adenosine Triphosphate
6. Enzymes
4. Cellular Respiration
1. Introduction
2. Energy in Living Systems
3. Glycolysis
4. Oxidation of Pyruvate and the Citric Acid Cycle
5. Oxidative Phosphorylation
6. Metabolism without Oxygen
7. Connections of Carbohydrate, Protein, and Lipid
Metabolic Pathways
8. Regulation of Cellular Respiration
5. Photosynthesis
1. Introduction
2. Overview of Photosynthesis
3. The Light-Dependent Reactions of Photosynthesis
4. Using Light Energy to Make Organic Molecules
6. Cell Communication
1. Introduction
2. Signaling Molecules and Cellular Receptors
3. Propagation of the Signal
4. Response to the Signal
5. Signaling in Single-Celled Organisms
7. Cell Reproduction
1. Introduction
2. Cell Division
3. The Cell Cycle
4. Control of the Cell Cycle
5. Cancer and the Cell Cycle
6. Prokaryotic Cell Division
4. Genetics
1. Meiosis and Sexual Reproduction
1. Introduction
2. The Process of Meiosis
3. Sexual Reproduction
2. Mendel's Experiments and Heredity
1. Introduction
2. Mendel’s Experiments and the Laws of
Probability
3. Characteristics and Traits
4. Laws of Inheritance
3. Modern Understandings of Inheritance
1. Introduction
2. Chromosomal Theory and Genetic Linkage
3. Chromosomal Basis of Inherited Disorders
4. DNA Structure and Function
1. Introduction
2. Historical Basis of Modern Understanding
3. DNA Structure and Sequencing
4. Basics of DNA Replication
5. DNA Replication in Prokaryotes
6. DNA Replication in Eukaryotes
7. DNA Repair
5. Genes and Proteins
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MedQA Pretrain Corpus

A medical pretraining corpus combining multiple high-quality medical text sources for training my mini small language model (mini-SLM) on medical domain knowledge just for learning, fun and research purpose.

Dataset Description

This corpus was built for causal language model pretraining on the medical domain. It is NOT a finetuning dataset.

Total Size

~1.5 GB of clean medical text

Sources Combined

  • Medical textbooks (PDF extracted, OpenStax Biology, Anatomy etc.)
  • PubMed abstracts and articles (ccdv/pubmed-summarization)
  • Research Q&A from PubMed (qiaojin/PubMedQA)
  • Medical conversations (lavita/medical-qa-datasets)

Data Format

Plain text file. Each paragraph separated by a blank line. No special tokens or formatting — raw clean text ready for tokenization and pretraining.

Intended Use

  • Pretraining small language models (20M–360M parameters)
  • Domain adaptation of existing LLMs to medical domain
  • Vocabulary building for medical tokenizers

Languages

English only

License

CC-BY-4.0 — Free to use with attribution '''

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