Dataset Viewer
The dataset viewer is not available for this subset.
Cannot get the split names for the config 'default' of the dataset.
Exception:    SplitsNotFoundError
Message:      The split names could not be parsed from the dataset config.
Traceback:    Traceback (most recent call last):
                File "/usr/local/lib/python3.14/site-packages/datasets/inspect.py", line 286, in get_dataset_config_info
                  for split_generator in builder._split_generators(
                                         ~~~~~~~~~~~~~~~~~~~~~~~~~^
                      StreamingDownloadManager(base_path=builder.base_path, download_config=download_config)
                      ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
                  )
                  ^
                File "/usr/local/lib/python3.14/site-packages/datasets/packaged_modules/folder_based_builder/folder_based_builder.py", line 134, in _split_generators
                  analyze(archives, downloaded_dirs, split_name)
                  ~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
                File "/usr/local/lib/python3.14/site-packages/datasets/packaged_modules/folder_based_builder/folder_based_builder.py", line 109, in analyze
                  _, downloaded_dir_file_ext = os.path.splitext(downloaded_dir_file)
                                               ~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^
                File "/usr/local/lib/python3.14/site-packages/datasets/utils/file_utils.py", line 722, in xsplitext
                  if is_local_path(a):
                     ~~~~~~~~~~~~~^^^
                File "/usr/local/lib/python3.14/site-packages/datasets/utils/file_utils.py", line 83, in is_local_path
                  return urlparse(url_or_filename).scheme == "" or os.path.ismount(urlparse(url_or_filename).scheme + ":/")
                         ~~~~~~~~^^^^^^^^^^^^^^^^^
                File "/usr/local/lib/python3.14/urllib/parse.py", line 397, in urlparse
                  scheme, netloc, url, params, query, fragment = _urlparse(url, scheme, allow_fragments)
                                                                 ~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
                File "/usr/local/lib/python3.14/urllib/parse.py", line 402, in _urlparse
                  scheme, netloc, url, query, fragment = _urlsplit(url, scheme, allow_fragments)
                                                         ~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
                File "/usr/local/lib/python3.14/urllib/parse.py", line 527, in _urlsplit
                  _check_bracketed_netloc(netloc)
                  ~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^
                File "/usr/local/lib/python3.14/urllib/parse.py", line 456, in _check_bracketed_netloc
                  raise ValueError("Invalid IPv6 URL")
              ValueError: Invalid IPv6 URL
              
              The above exception was the direct cause of the following exception:
              
              Traceback (most recent call last):
                File "/src/services/worker/src/worker/job_runners/config/split_names.py", line 68, in compute_split_names_from_streaming_response
                  for split in get_dataset_split_names(
                               ~~~~~~~~~~~~~~~~~~~~~~~^
                      path=dataset,
                      ^^^^^^^^^^^^^
                      config_name=config,
                      ^^^^^^^^^^^^^^^^^^^
                      token=hf_token,
                      ^^^^^^^^^^^^^^^
                  )
                  ^
                File "/usr/local/lib/python3.14/site-packages/datasets/inspect.py", line 340, in get_dataset_split_names
                  info = get_dataset_config_info(
                      path,
                  ...<6 lines>...
                      **config_kwargs,
                  )
                File "/usr/local/lib/python3.14/site-packages/datasets/inspect.py", line 291, in get_dataset_config_info
                  raise SplitsNotFoundError("The split names could not be parsed from the dataset config.") from err
              datasets.inspect.SplitsNotFoundError: The split names could not be parsed from the dataset config.

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DATA-DIFFUSION-BASED-PAPER

Time-lapse fluorescence-microscopy data released with the DATA-DIFFUSION-BASED-PAPER project. The archive contains source image files and accompanying metadata used by the DINO benchmark and downstream analyses.

Contents

  • Experimental-condition directories containing TIFF frames and ZIP archives.
  • 2,946 TIFF files and 78 ZIP archives.
  • 3,024 metadata files.
  • Conditions include susceptible mono-culture + DTPA, DTPA controls, and active/susceptible co-culture + DTPA.

Intended use

Research on microscopy representation learning, fluorescence-image embeddings, temporal analysis, and condition-level comparison. Associated benchmark code is available in the rubentium/dino_stuff repository.

Data format

Images are provided as TIFF files, with some original experiment bundles retained as ZIP archives. Metadata files are stored alongside the corresponding experiment directories.

Important notes

This is an archival copy of the source data used in the project. No additional de-identification, normalization, or train/test split is imposed here. Users should inspect metadata and experimental provenance before reuse and comply with applicable institutional and ethical requirements.

License

No explicit redistribution license was present in the source directory at upload time. Treat the data as research-use material and contact the data owner before redistribution or commercial use.

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