open-neo/open-neo-public-assets

Open-Neo Public Fixed Assets

This dataset repository hosts the public, reference-like fixed assets prepared for reproducible Open-Neo installation and execution.

Package contents

The archive is split into 20 GB tar.gz parts:

cat open_neo_public_assets_openrefs_20260824.tar.gz.part-* > open_neo_public_assets_openrefs_20260824.tar.gz
sha256sum -c SHA256SUMS
tar -xzf open_neo_public_assets_openrefs_20260824.tar.gz -C /path/to/neodata4git/data

Included top-level directories:

• annotation
• ascat
• facets
• fusion
• hmf
• normal
• ref
• rna
• sample_identity
• sequenza
• snaf
• vep
• easyfuse

License and redistribution boundary

License: mixed-source-reference-assets.

Individual files remain governed by their original upstream licenses and terms of use. This package is intended to redistribute only public/reference-like assets needed by Open-Neo workflows.

The following restricted or license-sensitive asset groups are excluded from the public package pending redistribution review:

• hla
• lohhla
• predictors
• presentation
• tools

License-restricted binaries and tools, including NetMHCpan, NetMHCstabpan, NetChop, POLYSOLVER, novoalign and related license files, are not included.

Separately published supplements (not inside the split tar):

• data/rna/rsem_reference/
• data/splice/splicemutr/r_library/BSgenome.Hsapiens.UCSC.hg38/
• data/hla/spechla/db/ (SpecHLA database; HLA-LA PRG/IMGT graph remains excluded)

Manifests

• FILE_MANIFEST.tsv: file-level manifest for included archive contents.
• INCLUDED_SIZES.tsv: source directory size summary.
• EXCLUDED_RESTRICTED_ASSETS.tsv: excluded asset groups and reasons.
• SHA256SUMS: checksums for archive parts and manifest files.

Source

Prepared from the Open-Neo fixed asset root on server 10.200.50.134. Generated on 2026-08-24.