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chrom
large_string
pos
int64
ref
large_string
alt
large_string
label
bool
subset
large_string
gene
large_string
assay
large_string
mavedb_urn
large_string
function_score
float64
author_gene
large_string
author_chromosome
int64
author_position_hg19
int64
author_reference
large_string
author_alt
large_string
author_transcript_id
large_string
author_transcript_position
large_string
author_transcript_ref
large_string
author_transcript_alt
large_string
author_transcript_variant
large_string
author_aa_pos
float64
author_aa_ref
large_string
author_aa_alt
large_string
author_protein_variant
large_string
author_consequence
large_string
author_function_score_mean
float64
author_func_class
large_string
author_p_nonfunctional
float64
author_experiment
large_string
author_negative
int64
author_library
int64
author_d5_r1
int64
author_d11_r1
int64
author_d5_r2
int64
author_d11_r2
int64
author_neg_freq
float64
author_library_freq
float64
author_d5_freq_r1
float64
author_d11_freq_r1
float64
author_d5_freq_r2
float64
author_d11_freq_r2
float64
author_d5_lib_ratio_r1
float64
author_loess_fit_r1
float64
author_d11_lib_raw_r1
float64
author_d11_lib_loess_r1
float64
author_d5_lib_ratio_r2
float64
author_loess_fit_r2
float64
author_d11_lib_raw_r2
float64
author_d11_lib_loess_r2
float64
author_function_score_r1
float64
author_function_score_r2
float64
author_rna_r1
float64
author_rna_r2
float64
author_rna_r1_freq
float64
author_rna_r2_freq
float64
author_rna_score_1
float64
author_rna_score_2
float64
author_mean_rna_score
float64
author_cadd_score
float64
author_phylop_mammalian
float64
author_polyphen2
float64
author_sift
float64
author_agvgd_diff
float64
author_agvgd_class
float64
author_clinvar
large_string
author_clinvar_simple
large_string
author_gnomad_af
float64
author_bravo_af
float64
author_flossies_af
float64
author_wt_hap1_function_score_r1
float64
author_wt_hap1_function_score_r2
float64
author_wt_hap1_function_score_mean
float64
consequence
large_string
consequence_cre
large_string
exon_closest_pc_gene_id
large_string
distance_exon_pc
int64
exon_closest_nc_gene_id
large_string
distance_exon_nc
int64
distance_exon
int64
exon_closest_gene_id
large_string
consequence_final
large_string
tss_closest_pc_gene_id
large_string
distance_tss_pc
int64
tss_closest_nc_gene_id
large_string
distance_tss_nc
int64
distance_tss
int64
tss_closest_gene_id
large_string
consequence_group
large_string
author_accession
large_string
author_hgvs_nt
large_string
author_hgvs_splice
large_string
author_hgvs_pro
large_string
author_score
float64
author_chrom
large_string
author_pos
int64
author_ref
large_string
author_exon
large_string
author_target
large_string
author_standard_error
float64
author_95_ci_upper
float64
author_95_ci_lower
float64
author_amino_acid_change
large_string
author_cds_position
large_string
author_cdna_position
large_string
author_functional_consequence
large_string
author_gmm_density_abnormal
float64
author_gmm_density_normal
float64
author_variant_qc_flag
large_string
author_functional_classification
large_string
author_z_score_d4_d7
float64
author_z_score_continuous
float64
author_bh_fdr_d4_d7
float64
author_bh_fdr_d4_d14
float64
author_bh_fdr_continuous
float64
author_processed_adj_lfc_d4_d7
float64
author_processed_adj_lfc_d4_d14
float64
author_processed_adj_lfc_continuous
float64
author_two_tailed_p_d4_d7
float64
author_two_tailed_p_d4_d14
float64
author_two_tailed_p_continuous
float64
author_se_bind_d4_d7
float64
author_se_bind_d4_d14
float64
author_se_bind_continuous
float64
author_gmm_fast_depleted_z
large_string
author_gmm_slow_depleted_z
large_string
author_gmm_uncertainty
large_string
author_processed_lfc_d4_d7
float64
author_processed_lfc_d4_d10
float64
author_processed_lfc_d4_d14
float64
author_processed_lfc_d4_d21
float64
author_processed_lfc_continuous
float64
author_se_bind_d4_d10
float64
author_se_bind_d4_d21
float64
author_processed_z_d4_d7
float64
author_processed_z_d4_d10
float64
author_processed_z_d4_d14
float64
author_processed_z_d4_d21
float64
author_processed_z_continuous
float64
author_processed_bh_fdr_d4_d7
float64
author_processed_bh_fdr_d4_d10
float64
author_processed_bh_fdr_d4_d14
float64
author_processed_bh_fdr_d4_d21
float64
author_processed_bh_fdr_continuous
float64
author_confidence_of_functionally_abnormal_variant_prediction
large_string
author_sge_prediction_of_variant_function_in_ndd_context
large_string
author_protein_position
large_string
author_score_no_dab
large_string
author_score_hap1_hif1a_ko
large_string
author_rna_score_d6
large_string
author_rna_score_d20
large_string
assay_phenotypic_assay_method
large_string
assay_delivery_method
large_string
assay_endogenous_locus_library_method_mechanism
large_string
assay_endogenous_locus_library_method_system
large_string
assay_phenotypic_assay_dimensionality
large_string
assay_phenotypic_assay_mechanism
large_string
assay_phenotypic_assay_model_system
large_string
assay_phenotypic_assay_profiling_strategy
large_string
assay_phenotypic_assay_sequencing_read_type
large_string
assay_variant_library_creation_method
large_string
assay_molecular_mechanism_assessed
large_string
author_class_harmonized
large_string
calibrated_class
large_string
calibration_scheme
large_string
acmg_strength
large_string
function_direction
int8
function_score_aligned
float64
variant_id
large_string
query_name
large_string
variant_pos0
int64
human_start
int64
human_end
int64
human_reference_sequence
large_string
projection_version
large_string
projection_chrom_0
large_string
projection_start_0
int64
projection_end_0
int64
projection_strand_0
large_string
available_0
bool
quality_pass_0
bool
projection_chrom_1
large_string
projection_start_1
int64
projection_end_1
int64
projection_strand_1
large_string
available_1
bool
quality_pass_1
bool
projection_chrom_2
large_string
projection_start_2
int64
projection_end_2
int64
projection_strand_2
large_string
available_2
bool
quality_pass_2
bool
projection_chrom_3
large_string
projection_start_3
int64
projection_end_3
int64
projection_strand_3
large_string
available_3
bool
quality_pass_3
bool
projection_chrom_4
large_string
projection_start_4
int64
projection_end_4
int64
projection_strand_4
large_string
available_4
bool
quality_pass_4
bool
projection_chrom_5
large_string
projection_start_5
int64
projection_end_5
int64
projection_strand_5
large_string
available_5
bool
quality_pass_5
bool
projection_chrom_6
large_string
projection_start_6
int64
projection_end_6
int64
projection_strand_6
large_string
available_6
bool
quality_pass_6
bool
strand
large_string
sequence_0
large_string
sequence_1
large_string
sequence_2
large_string
sequence_3
large_string
sequence_4
large_string
sequence_5
large_string
sequence_6
large_string
sequence_7
large_string
context
large_string
ref_completion
large_string
alt_completion
large_string
target
bool
available_7
bool
quality_pass_7
bool
projection_chrom_7
large_string
projection_start_7
int64
projection_end_7
int64
projection_strand_7
large_string
species_order_version
large_string
document_id
large_string
1
35,187,965
T
A
false
splicing
SFPQ
sge
urn:mavedb:00001265-a-1
0.025045
null
null
null
null
A
null
null
null
null
null
null
null
null
null
splicing_variant
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
splice_region_variant
splice_region_variant
ENSG00000116560
7
ENSG00000116560
7
7
ENSG00000116560
splice_region_variant
ENSG00000116560
5,179
ENSG00000116560
76
76
ENSG00000116560
splicing
urn:mavedb:00001265-a-1#76
NC_000001.11:g.35187965T>A
NA
NA
0.025045
chr1
35,187,965
T
SFPQ_X7
SFPQ_X7B
0.014107
0.052694
-0.002605
---
p-
p-
functionally_normal
0.001065
0.998935
PASS
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
Cell proliferation assay
Chemical-based transfection
Nuclease
SpCas9
Single-dimensional data
Loss of function
Immortalized human cells
Direct sequencing
Single-segment (short read)
Endogenous locus library method
null
normal
normal
Investigator-provided functional classes
null
1
0.025045
1:35187965:T>A
sge_00000000
35,187,964
35,187,837
35,188,092
TCAAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCT
zoonomia-rag-direct-hal-v1
null
null
null
null
false
false
GL010061.1
14,197,946
14,198,201
+
true
true
TolMat_scaffold_339430
3,249
3,504
+
true
true
CM000179.6
111,552,699
111,552,954
-
true
true
CM000378.2
22,062,886
22,063,141
-
true
true
chr4
127,026,726
127,026,981
-
true
true
null
null
null
null
false
false
+
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
GCTGTTTGCCTCCCGTGACCCTATCACAGAGTAGAACTGCCCCACAGGGTTTCCTAGGCCGTAATCTTTACAAGCGGATTCTGCTGGCGGATTCGAACCACCAACCTTTCAATTAGCAATTGAGTGCTTAACCAATGTACCACCAGGGCTCCTTACAAGTTCTGTAGGCAGCTCAAATTTGACAACTTACTGGATCCATGTAGCCCATCCTGCTGTAACTTTCCTCTCTTTGGCGTCTCATTTGTTCTTCCATCT
CAACTATTATAAAGAAAATAATGGCTATAATGTGAGACATTACATTTTTCATTTAACTGGGTAAAACTTCATTCTAGGTACCCACAAGTTCTGTAGAAAATTCCAACGACTGCAAAAAAGTGAACTTACTGGATCCATGTAGCCCATCCGGCTGTAGCTTTCCTCTCTTTGGCGTCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCCCTTCTACGTCGTTCTTCCTCTTGCCTGGAAAT
GGTTAAAAAGAAAGAAAGAAAAAGGTAGAATAGCTACCATGTGAAAAGTGACATTTAACTGAATAAACTGCACCCTAGGTATCCACAAATTCTGTAGAAAACTCCGATTACATTGCAAAAGTTTACTTACTGGATCCATATAGCCCATCCGACTATAACTTTCCTCTCTTTGGCGTCTCATCTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCTTCCCTCCTACGTCGTTCTTCCTCTTGCCTGGAAA
AAGCCGTACTGTGGCGGTGTCCCACATATAAAATAGAGGAAGATTGGCACAGATGTTAGCTCAGGGACAATCTTCCTCAAGCAAAAAGAAGATTAGCAACACATGTTAGCTCAGGGCCAGTCTTCCTCACACACACACACAAATTAGCTATAATGCAAAATGTTCTACTTAACTGAGTAACATTTCGTTCTAGGTACCTACAAGTTTTATAGACAACTCCAATTAGATCACAACAGAAGTATACTTACTGGATCC
GCATTTGGTCCAGCAAGATCTGATAGGAGTTTATACACACAAAACAAAACAGCCACGCCTGAGTGAGTGTACACTTACAATGGATAAAAACTTACTGGATCCATGTAGCCCATCCTGCTGTAACTTTCTTCTCGTTGGCGTCTCATTTGTTCTTCCATCTCACGTTGGCGAATCATCATCTCTTCCTCTCGTCTACGCCGTTCCTCCTCTTGCCTACAAATATTTTTCAGGCATATAAAACAAAGTGTCATCCAT
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
TCAAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCT
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN[SEQ]GCTGTTTGCCTCCCGTGACCCTATCACAGAGTAGAACTGCCCCACAGGGTTTCCTAGGCC...
TGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCT
AGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCT
false
true
true
1
35,187,837
35,188,092
+
zoonomia-rag-v1
sge|1:35187965:T>A|+
1
35,187,965
T
A
false
splicing
SFPQ
sge
urn:mavedb:00001265-a-1
0.025045
null
null
null
null
A
null
null
null
null
null
null
null
null
null
splicing_variant
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
splice_region_variant
splice_region_variant
ENSG00000116560
7
ENSG00000116560
7
7
ENSG00000116560
splice_region_variant
ENSG00000116560
5,179
ENSG00000116560
76
76
ENSG00000116560
splicing
urn:mavedb:00001265-a-1#76
NC_000001.11:g.35187965T>A
NA
NA
0.025045
chr1
35,187,965
T
SFPQ_X7
SFPQ_X7B
0.014107
0.052694
-0.002605
---
p-
p-
functionally_normal
0.001065
0.998935
PASS
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
Cell proliferation assay
Chemical-based transfection
Nuclease
SpCas9
Single-dimensional data
Loss of function
Immortalized human cells
Direct sequencing
Single-segment (short read)
Endogenous locus library method
null
normal
normal
Investigator-provided functional classes
null
1
0.025045
1:35187965:T>A
sge_00000000
35,187,964
35,187,837
35,188,092
TCAAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCT
zoonomia-rag-direct-hal-v1
null
null
null
null
false
false
GL010061.1
14,197,946
14,198,201
+
true
true
TolMat_scaffold_339430
3,249
3,504
+
true
true
CM000179.6
111,552,699
111,552,954
-
true
true
CM000378.2
22,062,886
22,063,141
-
true
true
chr4
127,026,726
127,026,981
-
true
true
null
null
null
null
false
false
-
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
AGATGGAAGAACAAATGAGACGCCAAAGAGAGGAAAGTTACAGCAGGATGGGCTACATGGATCCAGTAAGTTGTCAAATTTGAGCTGCCTACAGAACTTGTAAGGAGCCCTGGTGGTACATTGGTTAAGCACTCAATTGCTAATTGAAAGGTTGGTGGTTCGAATCCGCCAGCAGAATCCGCTTGTAAAGATTACGGCCTAGGAAACCCTGTGGGGCAGTTCTACTCTGTGATAGGGTCACGGGAGGCAAACAGC
ATTTCCAGGCAAGAGGAAGAACGACGTAGAAGGGAGGAAGAGATGATGATTCGTCAACGTGAGATGGAAGAACAAATGAGACGCCAAAGAGAGGAAAGCTACAGCCGGATGGGCTACATGGATCCAGTAAGTTCACTTTTTTGCAGTCGTTGGAATTTTCTACAGAACTTGTGGGTACCTAGAATGAAGTTTTACCCAGTTAAATGAAAAATGTAATGTCTCACATTATAGCCATTATTTTCTTTATAATAGTTG
TTTCCAGGCAAGAGGAAGAACGACGTAGGAGGGAAGAAGAGATGATGATTCGTCAACGTGAGATGGAAGAACAGATGAGACGCCAAAGAGAGGAAAGTTATAGTCGGATGGGCTATATGGATCCAGTAAGTAAACTTTTGCAATGTAATCGGAGTTTTCTACAGAATTTGTGGATACCTAGGGTGCAGTTTATTCAGTTAAATGTCACTTTTCACATGGTAGCTATTCTACCTTTTTCTTTCTTTCTTTTTAACC
GGATCCAGTAAGTATACTTCTGTTGTGATCTAATTGGAGTTGTCTATAAAACTTGTAGGTACCTAGAACGAAATGTTACTCAGTTAAGTAGAACATTTTGCATTATAGCTAATTTGTGTGTGTGTGTGAGGAAGACTGGCCCTGAGCTAACATGTGTTGCTAATCTTCTTTTTGCTTGAGGAAGATTGTCCCTGAGCTAACATCTGTGCCAATCTTCCTCTATTTTATATGTGGGACACCGCCACAGTACGGCTT
ATGGATGACACTTTGTTTTATATGCCTGAAAAATATTTGTAGGCAAGAGGAGGAACGGCGTAGACGAGAGGAAGAGATGATGATTCGCCAACGTGAGATGGAAGAACAAATGAGACGCCAACGAGAAGAAAGTTACAGCAGGATGGGCTACATGGATCCAGTAAGTTTTTATCCATTGTAAGTGTACACTCACTCAGGCGTGGCTGTTTTGTTTTGTGTGTATAAACTCCTATCAGATCTTGCTGGACCAAATGC
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
AGGCAAGAGGAGGAACGACGTAGAAGAGAGGAAGAGATGATGATTCGTCAACGTGAGATGGAAGAACAAATGAGGCGCCAAAGAGAGGAAAGTTACAGCCGAATGGGCTACATGGATCCAGTAAGTCAGCCTTTACTGCCTTCCAATTGGAGTTGTCTATAGAACTTGCAGGTACCTAGAAGGAATTACAGGAAATTTTAATATCAAATTACAGTTATTTTCTGCTTTTTTTCTAACAAAGTATATTATGTTTGA
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN[SEQ]AGATGGAAGAACAAATGAGACGCCAAAGAGAGGAAAGTTACAGCAGGATGGGCTACATGG...
AGCCTTTACTGCCTTCCAATTGGAGTTGTCTATAGAACTTGCAGGTACCTAGAAGGAATTACAGGAAATTTTAATATCAAATTACAGTTATTTTCTGCTTTTTTTCTAACAAAGTATATTATGTTTGA
TGCCTTTACTGCCTTCCAATTGGAGTTGTCTATAGAACTTGCAGGTACCTAGAAGGAATTACAGGAAATTTTAATATCAAATTACAGTTATTTTCTGCTTTTTTTCTAACAAAGTATATTATGTTTGA
false
true
true
1
35,187,837
35,188,092
-
zoonomia-rag-v1
sge|1:35187965:T>A|-
1
35,187,965
T
G
false
splicing
SFPQ
sge
urn:mavedb:00001265-a-1
0.005667
null
null
null
null
G
null
null
null
null
null
null
null
null
null
splicing_variant
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
splice_region_variant
splice_region_variant
ENSG00000116560
7
ENSG00000116560
7
7
ENSG00000116560
splice_region_variant
ENSG00000116560
5,179
ENSG00000116560
76
76
ENSG00000116560
splicing
urn:mavedb:00001265-a-1#78
NC_000001.11:g.35187965T>G
NA
NA
0.005667
chr1
35,187,965
T
SFPQ_X7
SFPQ_X7B
0.009661
0.024602
-0.013268
---
p-
p-
functionally_normal
0.001202
0.998798
PASS
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
Cell proliferation assay
Chemical-based transfection
Nuclease
SpCas9
Single-dimensional data
Loss of function
Immortalized human cells
Direct sequencing
Single-segment (short read)
Endogenous locus library method
null
normal
normal
Investigator-provided functional classes
null
1
0.005667
1:35187965:T>G
sge_00000001
35,187,964
35,187,837
35,188,092
TCAAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCT
zoonomia-rag-direct-hal-v1
null
null
null
null
false
false
GL010061.1
14,197,946
14,198,201
+
true
true
TolMat_scaffold_339430
3,249
3,504
+
true
true
CM000179.6
111,552,699
111,552,954
-
true
true
CM000378.2
22,062,886
22,063,141
-
true
true
chr4
127,026,726
127,026,981
-
true
true
null
null
null
null
false
false
+
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
GCTGTTTGCCTCCCGTGACCCTATCACAGAGTAGAACTGCCCCACAGGGTTTCCTAGGCCGTAATCTTTACAAGCGGATTCTGCTGGCGGATTCGAACCACCAACCTTTCAATTAGCAATTGAGTGCTTAACCAATGTACCACCAGGGCTCCTTACAAGTTCTGTAGGCAGCTCAAATTTGACAACTTACTGGATCCATGTAGCCCATCCTGCTGTAACTTTCCTCTCTTTGGCGTCTCATTTGTTCTTCCATCT
CAACTATTATAAAGAAAATAATGGCTATAATGTGAGACATTACATTTTTCATTTAACTGGGTAAAACTTCATTCTAGGTACCCACAAGTTCTGTAGAAAATTCCAACGACTGCAAAAAAGTGAACTTACTGGATCCATGTAGCCCATCCGGCTGTAGCTTTCCTCTCTTTGGCGTCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCCCTTCTACGTCGTTCTTCCTCTTGCCTGGAAAT
GGTTAAAAAGAAAGAAAGAAAAAGGTAGAATAGCTACCATGTGAAAAGTGACATTTAACTGAATAAACTGCACCCTAGGTATCCACAAATTCTGTAGAAAACTCCGATTACATTGCAAAAGTTTACTTACTGGATCCATATAGCCCATCCGACTATAACTTTCCTCTCTTTGGCGTCTCATCTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCTTCCCTCCTACGTCGTTCTTCCTCTTGCCTGGAAA
AAGCCGTACTGTGGCGGTGTCCCACATATAAAATAGAGGAAGATTGGCACAGATGTTAGCTCAGGGACAATCTTCCTCAAGCAAAAAGAAGATTAGCAACACATGTTAGCTCAGGGCCAGTCTTCCTCACACACACACACAAATTAGCTATAATGCAAAATGTTCTACTTAACTGAGTAACATTTCGTTCTAGGTACCTACAAGTTTTATAGACAACTCCAATTAGATCACAACAGAAGTATACTTACTGGATCC
GCATTTGGTCCAGCAAGATCTGATAGGAGTTTATACACACAAAACAAAACAGCCACGCCTGAGTGAGTGTACACTTACAATGGATAAAAACTTACTGGATCCATGTAGCCCATCCTGCTGTAACTTTCTTCTCGTTGGCGTCTCATTTGTTCTTCCATCTCACGTTGGCGAATCATCATCTCTTCCTCTCGTCTACGCCGTTCCTCCTCTTGCCTACAAATATTTTTCAGGCATATAAAACAAAGTGTCATCCAT
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
TCAAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCT
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN[SEQ]GCTGTTTGCCTCCCGTGACCCTATCACAGAGTAGAACTGCCCCACAGGGTTTCCTAGGCC...
TGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCT
GGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCT
false
true
true
1
35,187,837
35,188,092
+
zoonomia-rag-v1
sge|1:35187965:T>G|+
1
35,187,965
T
G
false
splicing
SFPQ
sge
urn:mavedb:00001265-a-1
0.005667
null
null
null
null
G
null
null
null
null
null
null
null
null
null
splicing_variant
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
splice_region_variant
splice_region_variant
ENSG00000116560
7
ENSG00000116560
7
7
ENSG00000116560
splice_region_variant
ENSG00000116560
5,179
ENSG00000116560
76
76
ENSG00000116560
splicing
urn:mavedb:00001265-a-1#78
NC_000001.11:g.35187965T>G
NA
NA
0.005667
chr1
35,187,965
T
SFPQ_X7
SFPQ_X7B
0.009661
0.024602
-0.013268
---
p-
p-
functionally_normal
0.001202
0.998798
PASS
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
Cell proliferation assay
Chemical-based transfection
Nuclease
SpCas9
Single-dimensional data
Loss of function
Immortalized human cells
Direct sequencing
Single-segment (short read)
Endogenous locus library method
null
normal
normal
Investigator-provided functional classes
null
1
0.005667
1:35187965:T>G
sge_00000001
35,187,964
35,187,837
35,188,092
TCAAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCT
zoonomia-rag-direct-hal-v1
null
null
null
null
false
false
GL010061.1
14,197,946
14,198,201
+
true
true
TolMat_scaffold_339430
3,249
3,504
+
true
true
CM000179.6
111,552,699
111,552,954
-
true
true
CM000378.2
22,062,886
22,063,141
-
true
true
chr4
127,026,726
127,026,981
-
true
true
null
null
null
null
false
false
-
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
AGATGGAAGAACAAATGAGACGCCAAAGAGAGGAAAGTTACAGCAGGATGGGCTACATGGATCCAGTAAGTTGTCAAATTTGAGCTGCCTACAGAACTTGTAAGGAGCCCTGGTGGTACATTGGTTAAGCACTCAATTGCTAATTGAAAGGTTGGTGGTTCGAATCCGCCAGCAGAATCCGCTTGTAAAGATTACGGCCTAGGAAACCCTGTGGGGCAGTTCTACTCTGTGATAGGGTCACGGGAGGCAAACAGC
ATTTCCAGGCAAGAGGAAGAACGACGTAGAAGGGAGGAAGAGATGATGATTCGTCAACGTGAGATGGAAGAACAAATGAGACGCCAAAGAGAGGAAAGCTACAGCCGGATGGGCTACATGGATCCAGTAAGTTCACTTTTTTGCAGTCGTTGGAATTTTCTACAGAACTTGTGGGTACCTAGAATGAAGTTTTACCCAGTTAAATGAAAAATGTAATGTCTCACATTATAGCCATTATTTTCTTTATAATAGTTG
TTTCCAGGCAAGAGGAAGAACGACGTAGGAGGGAAGAAGAGATGATGATTCGTCAACGTGAGATGGAAGAACAGATGAGACGCCAAAGAGAGGAAAGTTATAGTCGGATGGGCTATATGGATCCAGTAAGTAAACTTTTGCAATGTAATCGGAGTTTTCTACAGAATTTGTGGATACCTAGGGTGCAGTTTATTCAGTTAAATGTCACTTTTCACATGGTAGCTATTCTACCTTTTTCTTTCTTTCTTTTTAACC
GGATCCAGTAAGTATACTTCTGTTGTGATCTAATTGGAGTTGTCTATAAAACTTGTAGGTACCTAGAACGAAATGTTACTCAGTTAAGTAGAACATTTTGCATTATAGCTAATTTGTGTGTGTGTGTGAGGAAGACTGGCCCTGAGCTAACATGTGTTGCTAATCTTCTTTTTGCTTGAGGAAGATTGTCCCTGAGCTAACATCTGTGCCAATCTTCCTCTATTTTATATGTGGGACACCGCCACAGTACGGCTT
ATGGATGACACTTTGTTTTATATGCCTGAAAAATATTTGTAGGCAAGAGGAGGAACGGCGTAGACGAGAGGAAGAGATGATGATTCGCCAACGTGAGATGGAAGAACAAATGAGACGCCAACGAGAAGAAAGTTACAGCAGGATGGGCTACATGGATCCAGTAAGTTTTTATCCATTGTAAGTGTACACTCACTCAGGCGTGGCTGTTTTGTTTTGTGTGTATAAACTCCTATCAGATCTTGCTGGACCAAATGC
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
AGGCAAGAGGAGGAACGACGTAGAAGAGAGGAAGAGATGATGATTCGTCAACGTGAGATGGAAGAACAAATGAGGCGCCAAAGAGAGGAAAGTTACAGCCGAATGGGCTACATGGATCCAGTAAGTCAGCCTTTACTGCCTTCCAATTGGAGTTGTCTATAGAACTTGCAGGTACCTAGAAGGAATTACAGGAAATTTTAATATCAAATTACAGTTATTTTCTGCTTTTTTTCTAACAAAGTATATTATGTTTGA
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN[SEQ]AGATGGAAGAACAAATGAGACGCCAAAGAGAGGAAAGTTACAGCAGGATGGGCTACATGG...
AGCCTTTACTGCCTTCCAATTGGAGTTGTCTATAGAACTTGCAGGTACCTAGAAGGAATTACAGGAAATTTTAATATCAAATTACAGTTATTTTCTGCTTTTTTTCTAACAAAGTATATTATGTTTGA
CGCCTTTACTGCCTTCCAATTGGAGTTGTCTATAGAACTTGCAGGTACCTAGAAGGAATTACAGGAAATTTTAATATCAAATTACAGTTATTTTCTGCTTTTTTTCTAACAAAGTATATTATGTTTGA
false
true
true
1
35,187,837
35,188,092
-
zoonomia-rag-v1
sge|1:35187965:T>G|-
1
35,187,966
G
A
false
splicing
SFPQ
sge
urn:mavedb:00001265-a-1
0.01518
null
null
null
null
A
null
null
null
null
null
null
null
null
null
splicing_variant
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
splice_region_variant
splice_region_variant
ENSG00000116560
6
ENSG00000116560
6
6
ENSG00000116560
splice_region_variant
ENSG00000116560
5,178
ENSG00000116560
75
75
ENSG00000116560
splicing
urn:mavedb:00001265-a-1#79
NC_000001.11:g.35187966G>A
NA
NA
0.01518
chr1
35,187,966
G
SFPQ_X7
SFPQ_X7B
0.007415
0.029713
0.000647
---
p-
p-
functionally_normal
0.000821
0.999179
PASS
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
Cell proliferation assay
Chemical-based transfection
Nuclease
SpCas9
Single-dimensional data
Loss of function
Immortalized human cells
Direct sequencing
Single-segment (short read)
Endogenous locus library method
null
normal
normal
Investigator-provided functional classes
null
1
0.01518
1:35187966:G>A
sge_00000002
35,187,965
35,187,838
35,188,093
CAAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTA
zoonomia-rag-direct-hal-v1
null
null
null
null
false
false
GL010061.1
14,197,946
14,198,201
+
true
true
TolMat_scaffold_339430
3,249
3,504
+
true
true
CM000179.6
111,552,699
111,552,954
-
true
true
CM000378.2
22,062,885
22,063,140
-
true
true
chr4
127,026,726
127,026,981
-
true
true
null
null
null
null
false
false
+
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
GCTGTTTGCCTCCCGTGACCCTATCACAGAGTAGAACTGCCCCACAGGGTTTCCTAGGCCGTAATCTTTACAAGCGGATTCTGCTGGCGGATTCGAACCACCAACCTTTCAATTAGCAATTGAGTGCTTAACCAATGTACCACCAGGGCTCCTTACAAGTTCTGTAGGCAGCTCAAATTTGACAACTTACTGGATCCATGTAGCCCATCCTGCTGTAACTTTCCTCTCTTTGGCGTCTCATTTGTTCTTCCATCT
CAACTATTATAAAGAAAATAATGGCTATAATGTGAGACATTACATTTTTCATTTAACTGGGTAAAACTTCATTCTAGGTACCCACAAGTTCTGTAGAAAATTCCAACGACTGCAAAAAAGTGAACTTACTGGATCCATGTAGCCCATCCGGCTGTAGCTTTCCTCTCTTTGGCGTCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCCCTTCTACGTCGTTCTTCCTCTTGCCTGGAAAT
GGTTAAAAAGAAAGAAAGAAAAAGGTAGAATAGCTACCATGTGAAAAGTGACATTTAACTGAATAAACTGCACCCTAGGTATCCACAAATTCTGTAGAAAACTCCGATTACATTGCAAAAGTTTACTTACTGGATCCATATAGCCCATCCGACTATAACTTTCCTCTCTTTGGCGTCTCATCTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCTTCCCTCCTACGTCGTTCTTCCTCTTGCCTGGAAA
AGCCGTACTGTGGCGGTGTCCCACATATAAAATAGAGGAAGATTGGCACAGATGTTAGCTCAGGGACAATCTTCCTCAAGCAAAAAGAAGATTAGCAACACATGTTAGCTCAGGGCCAGTCTTCCTCACACACACACACAAATTAGCTATAATGCAAAATGTTCTACTTAACTGAGTAACATTTCGTTCTAGGTACCTACAAGTTTTATAGACAACTCCAATTAGATCACAACAGAAGTATACTTACTGGATCCA
GCATTTGGTCCAGCAAGATCTGATAGGAGTTTATACACACAAAACAAAACAGCCACGCCTGAGTGAGTGTACACTTACAATGGATAAAAACTTACTGGATCCATGTAGCCCATCCTGCTGTAACTTTCTTCTCGTTGGCGTCTCATTTGTTCTTCCATCTCACGTTGGCGAATCATCATCTCTTCCTCTCGTCTACGCCGTTCCTCCTCTTGCCTACAAATATTTTTCAGGCATATAAAACAAAGTGTCATCCAT
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
CAAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTA
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN[SEQ]GCTGTTTGCCTCCCGTGACCCTATCACAGAGTAGAACTGCCCCACAGGGTTTCCTAGGCC...
GACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTA
AACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTA
false
true
true
1
35,187,838
35,188,093
+
zoonomia-rag-v1
sge|1:35187966:G>A|+
1
35,187,966
G
A
false
splicing
SFPQ
sge
urn:mavedb:00001265-a-1
0.01518
null
null
null
null
A
null
null
null
null
null
null
null
null
null
splicing_variant
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
splice_region_variant
splice_region_variant
ENSG00000116560
6
ENSG00000116560
6
6
ENSG00000116560
splice_region_variant
ENSG00000116560
5,178
ENSG00000116560
75
75
ENSG00000116560
splicing
urn:mavedb:00001265-a-1#79
NC_000001.11:g.35187966G>A
NA
NA
0.01518
chr1
35,187,966
G
SFPQ_X7
SFPQ_X7B
0.007415
0.029713
0.000647
---
p-
p-
functionally_normal
0.000821
0.999179
PASS
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
Cell proliferation assay
Chemical-based transfection
Nuclease
SpCas9
Single-dimensional data
Loss of function
Immortalized human cells
Direct sequencing
Single-segment (short read)
Endogenous locus library method
null
normal
normal
Investigator-provided functional classes
null
1
0.01518
1:35187966:G>A
sge_00000002
35,187,965
35,187,838
35,188,093
CAAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTA
zoonomia-rag-direct-hal-v1
null
null
null
null
false
false
GL010061.1
14,197,946
14,198,201
+
true
true
TolMat_scaffold_339430
3,249
3,504
+
true
true
CM000179.6
111,552,699
111,552,954
-
true
true
CM000378.2
22,062,885
22,063,140
-
true
true
chr4
127,026,726
127,026,981
-
true
true
null
null
null
null
false
false
-
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
AGATGGAAGAACAAATGAGACGCCAAAGAGAGGAAAGTTACAGCAGGATGGGCTACATGGATCCAGTAAGTTGTCAAATTTGAGCTGCCTACAGAACTTGTAAGGAGCCCTGGTGGTACATTGGTTAAGCACTCAATTGCTAATTGAAAGGTTGGTGGTTCGAATCCGCCAGCAGAATCCGCTTGTAAAGATTACGGCCTAGGAAACCCTGTGGGGCAGTTCTACTCTGTGATAGGGTCACGGGAGGCAAACAGC
ATTTCCAGGCAAGAGGAAGAACGACGTAGAAGGGAGGAAGAGATGATGATTCGTCAACGTGAGATGGAAGAACAAATGAGACGCCAAAGAGAGGAAAGCTACAGCCGGATGGGCTACATGGATCCAGTAAGTTCACTTTTTTGCAGTCGTTGGAATTTTCTACAGAACTTGTGGGTACCTAGAATGAAGTTTTACCCAGTTAAATGAAAAATGTAATGTCTCACATTATAGCCATTATTTTCTTTATAATAGTTG
TTTCCAGGCAAGAGGAAGAACGACGTAGGAGGGAAGAAGAGATGATGATTCGTCAACGTGAGATGGAAGAACAGATGAGACGCCAAAGAGAGGAAAGTTATAGTCGGATGGGCTATATGGATCCAGTAAGTAAACTTTTGCAATGTAATCGGAGTTTTCTACAGAATTTGTGGATACCTAGGGTGCAGTTTATTCAGTTAAATGTCACTTTTCACATGGTAGCTATTCTACCTTTTTCTTTCTTTCTTTTTAACC
TGGATCCAGTAAGTATACTTCTGTTGTGATCTAATTGGAGTTGTCTATAAAACTTGTAGGTACCTAGAACGAAATGTTACTCAGTTAAGTAGAACATTTTGCATTATAGCTAATTTGTGTGTGTGTGTGAGGAAGACTGGCCCTGAGCTAACATGTGTTGCTAATCTTCTTTTTGCTTGAGGAAGATTGTCCCTGAGCTAACATCTGTGCCAATCTTCCTCTATTTTATATGTGGGACACCGCCACAGTACGGCT
ATGGATGACACTTTGTTTTATATGCCTGAAAAATATTTGTAGGCAAGAGGAGGAACGGCGTAGACGAGAGGAAGAGATGATGATTCGCCAACGTGAGATGGAAGAACAAATGAGACGCCAACGAGAAGAAAGTTACAGCAGGATGGGCTACATGGATCCAGTAAGTTTTTATCCATTGTAAGTGTACACTCACTCAGGCGTGGCTGTTTTGTTTTGTGTGTATAAACTCCTATCAGATCTTGCTGGACCAAATGC
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
TAGGCAAGAGGAGGAACGACGTAGAAGAGAGGAAGAGATGATGATTCGTCAACGTGAGATGGAAGAACAAATGAGGCGCCAAAGAGAGGAAAGTTACAGCCGAATGGGCTACATGGATCCAGTAAGTCAGCCTTTACTGCCTTCCAATTGGAGTTGTCTATAGAACTTGCAGGTACCTAGAAGGAATTACAGGAAATTTTAATATCAAATTACAGTTATTTTCTGCTTTTTTTCTAACAAAGTATATTATGTTTG
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN[SEQ]AGATGGAAGAACAAATGAGACGCCAAAGAGAGGAAAGTTACAGCAGGATGGGCTACATGG...
CAGCCTTTACTGCCTTCCAATTGGAGTTGTCTATAGAACTTGCAGGTACCTAGAAGGAATTACAGGAAATTTTAATATCAAATTACAGTTATTTTCTGCTTTTTTTCTAACAAAGTATATTATGTTTG
TAGCCTTTACTGCCTTCCAATTGGAGTTGTCTATAGAACTTGCAGGTACCTAGAAGGAATTACAGGAAATTTTAATATCAAATTACAGTTATTTTCTGCTTTTTTTCTAACAAAGTATATTATGTTTG
false
true
true
1
35,187,838
35,188,093
-
zoonomia-rag-v1
sge|1:35187966:G>A|-
1
35,187,966
G
C
false
splicing
SFPQ
sge
urn:mavedb:00001265-a-1
0.015469
null
null
null
null
C
null
null
null
null
null
null
null
null
null
splicing_variant
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
splice_region_variant
splice_region_variant
ENSG00000116560
6
ENSG00000116560
6
6
ENSG00000116560
splice_region_variant
ENSG00000116560
5,178
ENSG00000116560
75
75
ENSG00000116560
splicing
urn:mavedb:00001265-a-1#80
NC_000001.11:g.35187966G>C
NA
NA
0.015469
chr1
35,187,966
G
SFPQ_X7
SFPQ_X7B
0.006874
0.028942
0.001997
---
p-
p-
functionally_normal
0.00082
0.99918
PASS
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
Cell proliferation assay
Chemical-based transfection
Nuclease
SpCas9
Single-dimensional data
Loss of function
Immortalized human cells
Direct sequencing
Single-segment (short read)
Endogenous locus library method
null
normal
normal
Investigator-provided functional classes
null
1
0.015469
1:35187966:G>C
sge_00000003
35,187,965
35,187,838
35,188,093
CAAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTA
zoonomia-rag-direct-hal-v1
null
null
null
null
false
false
GL010061.1
14,197,946
14,198,201
+
true
true
TolMat_scaffold_339430
3,249
3,504
+
true
true
CM000179.6
111,552,699
111,552,954
-
true
true
CM000378.2
22,062,885
22,063,140
-
true
true
chr4
127,026,726
127,026,981
-
true
true
null
null
null
null
false
false
+
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
GCTGTTTGCCTCCCGTGACCCTATCACAGAGTAGAACTGCCCCACAGGGTTTCCTAGGCCGTAATCTTTACAAGCGGATTCTGCTGGCGGATTCGAACCACCAACCTTTCAATTAGCAATTGAGTGCTTAACCAATGTACCACCAGGGCTCCTTACAAGTTCTGTAGGCAGCTCAAATTTGACAACTTACTGGATCCATGTAGCCCATCCTGCTGTAACTTTCCTCTCTTTGGCGTCTCATTTGTTCTTCCATCT
CAACTATTATAAAGAAAATAATGGCTATAATGTGAGACATTACATTTTTCATTTAACTGGGTAAAACTTCATTCTAGGTACCCACAAGTTCTGTAGAAAATTCCAACGACTGCAAAAAAGTGAACTTACTGGATCCATGTAGCCCATCCGGCTGTAGCTTTCCTCTCTTTGGCGTCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCCCTTCTACGTCGTTCTTCCTCTTGCCTGGAAAT
GGTTAAAAAGAAAGAAAGAAAAAGGTAGAATAGCTACCATGTGAAAAGTGACATTTAACTGAATAAACTGCACCCTAGGTATCCACAAATTCTGTAGAAAACTCCGATTACATTGCAAAAGTTTACTTACTGGATCCATATAGCCCATCCGACTATAACTTTCCTCTCTTTGGCGTCTCATCTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCTTCCCTCCTACGTCGTTCTTCCTCTTGCCTGGAAA
AGCCGTACTGTGGCGGTGTCCCACATATAAAATAGAGGAAGATTGGCACAGATGTTAGCTCAGGGACAATCTTCCTCAAGCAAAAAGAAGATTAGCAACACATGTTAGCTCAGGGCCAGTCTTCCTCACACACACACACAAATTAGCTATAATGCAAAATGTTCTACTTAACTGAGTAACATTTCGTTCTAGGTACCTACAAGTTTTATAGACAACTCCAATTAGATCACAACAGAAGTATACTTACTGGATCCA
GCATTTGGTCCAGCAAGATCTGATAGGAGTTTATACACACAAAACAAAACAGCCACGCCTGAGTGAGTGTACACTTACAATGGATAAAAACTTACTGGATCCATGTAGCCCATCCTGCTGTAACTTTCTTCTCGTTGGCGTCTCATTTGTTCTTCCATCTCACGTTGGCGAATCATCATCTCTTCCTCTCGTCTACGCCGTTCCTCCTCTTGCCTACAAATATTTTTCAGGCATATAAAACAAAGTGTCATCCAT
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
CAAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTA
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN[SEQ]GCTGTTTGCCTCCCGTGACCCTATCACAGAGTAGAACTGCCCCACAGGGTTTCCTAGGCC...
GACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTA
CACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTA
false
true
true
1
35,187,838
35,188,093
+
zoonomia-rag-v1
sge|1:35187966:G>C|+
1
35,187,966
G
C
false
splicing
SFPQ
sge
urn:mavedb:00001265-a-1
0.015469
null
null
null
null
C
null
null
null
null
null
null
null
null
null
splicing_variant
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
splice_region_variant
splice_region_variant
ENSG00000116560
6
ENSG00000116560
6
6
ENSG00000116560
splice_region_variant
ENSG00000116560
5,178
ENSG00000116560
75
75
ENSG00000116560
splicing
urn:mavedb:00001265-a-1#80
NC_000001.11:g.35187966G>C
NA
NA
0.015469
chr1
35,187,966
G
SFPQ_X7
SFPQ_X7B
0.006874
0.028942
0.001997
---
p-
p-
functionally_normal
0.00082
0.99918
PASS
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
Cell proliferation assay
Chemical-based transfection
Nuclease
SpCas9
Single-dimensional data
Loss of function
Immortalized human cells
Direct sequencing
Single-segment (short read)
Endogenous locus library method
null
normal
normal
Investigator-provided functional classes
null
1
0.015469
1:35187966:G>C
sge_00000003
35,187,965
35,187,838
35,188,093
CAAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTA
zoonomia-rag-direct-hal-v1
null
null
null
null
false
false
GL010061.1
14,197,946
14,198,201
+
true
true
TolMat_scaffold_339430
3,249
3,504
+
true
true
CM000179.6
111,552,699
111,552,954
-
true
true
CM000378.2
22,062,885
22,063,140
-
true
true
chr4
127,026,726
127,026,981
-
true
true
null
null
null
null
false
false
-
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
AGATGGAAGAACAAATGAGACGCCAAAGAGAGGAAAGTTACAGCAGGATGGGCTACATGGATCCAGTAAGTTGTCAAATTTGAGCTGCCTACAGAACTTGTAAGGAGCCCTGGTGGTACATTGGTTAAGCACTCAATTGCTAATTGAAAGGTTGGTGGTTCGAATCCGCCAGCAGAATCCGCTTGTAAAGATTACGGCCTAGGAAACCCTGTGGGGCAGTTCTACTCTGTGATAGGGTCACGGGAGGCAAACAGC
ATTTCCAGGCAAGAGGAAGAACGACGTAGAAGGGAGGAAGAGATGATGATTCGTCAACGTGAGATGGAAGAACAAATGAGACGCCAAAGAGAGGAAAGCTACAGCCGGATGGGCTACATGGATCCAGTAAGTTCACTTTTTTGCAGTCGTTGGAATTTTCTACAGAACTTGTGGGTACCTAGAATGAAGTTTTACCCAGTTAAATGAAAAATGTAATGTCTCACATTATAGCCATTATTTTCTTTATAATAGTTG
TTTCCAGGCAAGAGGAAGAACGACGTAGGAGGGAAGAAGAGATGATGATTCGTCAACGTGAGATGGAAGAACAGATGAGACGCCAAAGAGAGGAAAGTTATAGTCGGATGGGCTATATGGATCCAGTAAGTAAACTTTTGCAATGTAATCGGAGTTTTCTACAGAATTTGTGGATACCTAGGGTGCAGTTTATTCAGTTAAATGTCACTTTTCACATGGTAGCTATTCTACCTTTTTCTTTCTTTCTTTTTAACC
TGGATCCAGTAAGTATACTTCTGTTGTGATCTAATTGGAGTTGTCTATAAAACTTGTAGGTACCTAGAACGAAATGTTACTCAGTTAAGTAGAACATTTTGCATTATAGCTAATTTGTGTGTGTGTGTGAGGAAGACTGGCCCTGAGCTAACATGTGTTGCTAATCTTCTTTTTGCTTGAGGAAGATTGTCCCTGAGCTAACATCTGTGCCAATCTTCCTCTATTTTATATGTGGGACACCGCCACAGTACGGCT
ATGGATGACACTTTGTTTTATATGCCTGAAAAATATTTGTAGGCAAGAGGAGGAACGGCGTAGACGAGAGGAAGAGATGATGATTCGCCAACGTGAGATGGAAGAACAAATGAGACGCCAACGAGAAGAAAGTTACAGCAGGATGGGCTACATGGATCCAGTAAGTTTTTATCCATTGTAAGTGTACACTCACTCAGGCGTGGCTGTTTTGTTTTGTGTGTATAAACTCCTATCAGATCTTGCTGGACCAAATGC
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
TAGGCAAGAGGAGGAACGACGTAGAAGAGAGGAAGAGATGATGATTCGTCAACGTGAGATGGAAGAACAAATGAGGCGCCAAAGAGAGGAAAGTTACAGCCGAATGGGCTACATGGATCCAGTAAGTCAGCCTTTACTGCCTTCCAATTGGAGTTGTCTATAGAACTTGCAGGTACCTAGAAGGAATTACAGGAAATTTTAATATCAAATTACAGTTATTTTCTGCTTTTTTTCTAACAAAGTATATTATGTTTG
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN[SEQ]AGATGGAAGAACAAATGAGACGCCAAAGAGAGGAAAGTTACAGCAGGATGGGCTACATGG...
CAGCCTTTACTGCCTTCCAATTGGAGTTGTCTATAGAACTTGCAGGTACCTAGAAGGAATTACAGGAAATTTTAATATCAAATTACAGTTATTTTCTGCTTTTTTTCTAACAAAGTATATTATGTTTG
GAGCCTTTACTGCCTTCCAATTGGAGTTGTCTATAGAACTTGCAGGTACCTAGAAGGAATTACAGGAAATTTTAATATCAAATTACAGTTATTTTCTGCTTTTTTTCTAACAAAGTATATTATGTTTG
false
true
true
1
35,187,838
35,188,093
-
zoonomia-rag-v1
sge|1:35187966:G>C|-
1
35,187,966
G
T
false
splicing
SFPQ
sge
urn:mavedb:00001265-a-1
0.009015
null
null
null
null
T
null
null
null
null
null
null
null
null
null
splicing_variant
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
splice_region_variant
splice_region_variant
ENSG00000116560
6
ENSG00000116560
6
6
ENSG00000116560
splice_region_variant
ENSG00000116560
5,178
ENSG00000116560
75
75
ENSG00000116560
splicing
urn:mavedb:00001265-a-1#81
NC_000001.11:g.35187966G>T
NA
NA
0.009015
chr1
35,187,966
G
SFPQ_X7
SFPQ_X7B
0.014983
0.038381
-0.020351
---
p-
p-
functionally_normal
0.00098
0.99902
PASS
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
Cell proliferation assay
Chemical-based transfection
Nuclease
SpCas9
Single-dimensional data
Loss of function
Immortalized human cells
Direct sequencing
Single-segment (short read)
Endogenous locus library method
null
normal
normal
Investigator-provided functional classes
null
1
0.009015
1:35187966:G>T
sge_00000004
35,187,965
35,187,838
35,188,093
CAAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTA
zoonomia-rag-direct-hal-v1
null
null
null
null
false
false
GL010061.1
14,197,946
14,198,201
+
true
true
TolMat_scaffold_339430
3,249
3,504
+
true
true
CM000179.6
111,552,699
111,552,954
-
true
true
CM000378.2
22,062,885
22,063,140
-
true
true
chr4
127,026,726
127,026,981
-
true
true
null
null
null
null
false
false
+
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
GCTGTTTGCCTCCCGTGACCCTATCACAGAGTAGAACTGCCCCACAGGGTTTCCTAGGCCGTAATCTTTACAAGCGGATTCTGCTGGCGGATTCGAACCACCAACCTTTCAATTAGCAATTGAGTGCTTAACCAATGTACCACCAGGGCTCCTTACAAGTTCTGTAGGCAGCTCAAATTTGACAACTTACTGGATCCATGTAGCCCATCCTGCTGTAACTTTCCTCTCTTTGGCGTCTCATTTGTTCTTCCATCT
CAACTATTATAAAGAAAATAATGGCTATAATGTGAGACATTACATTTTTCATTTAACTGGGTAAAACTTCATTCTAGGTACCCACAAGTTCTGTAGAAAATTCCAACGACTGCAAAAAAGTGAACTTACTGGATCCATGTAGCCCATCCGGCTGTAGCTTTCCTCTCTTTGGCGTCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCCCTTCTACGTCGTTCTTCCTCTTGCCTGGAAAT
GGTTAAAAAGAAAGAAAGAAAAAGGTAGAATAGCTACCATGTGAAAAGTGACATTTAACTGAATAAACTGCACCCTAGGTATCCACAAATTCTGTAGAAAACTCCGATTACATTGCAAAAGTTTACTTACTGGATCCATATAGCCCATCCGACTATAACTTTCCTCTCTTTGGCGTCTCATCTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCTTCCCTCCTACGTCGTTCTTCCTCTTGCCTGGAAA
AGCCGTACTGTGGCGGTGTCCCACATATAAAATAGAGGAAGATTGGCACAGATGTTAGCTCAGGGACAATCTTCCTCAAGCAAAAAGAAGATTAGCAACACATGTTAGCTCAGGGCCAGTCTTCCTCACACACACACACAAATTAGCTATAATGCAAAATGTTCTACTTAACTGAGTAACATTTCGTTCTAGGTACCTACAAGTTTTATAGACAACTCCAATTAGATCACAACAGAAGTATACTTACTGGATCCA
GCATTTGGTCCAGCAAGATCTGATAGGAGTTTATACACACAAAACAAAACAGCCACGCCTGAGTGAGTGTACACTTACAATGGATAAAAACTTACTGGATCCATGTAGCCCATCCTGCTGTAACTTTCTTCTCGTTGGCGTCTCATTTGTTCTTCCATCTCACGTTGGCGAATCATCATCTCTTCCTCTCGTCTACGCCGTTCCTCCTCTTGCCTACAAATATTTTTCAGGCATATAAAACAAAGTGTCATCCAT
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
CAAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTA
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN[SEQ]GCTGTTTGCCTCCCGTGACCCTATCACAGAGTAGAACTGCCCCACAGGGTTTCCTAGGCC...
GACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTA
TACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTA
false
true
true
1
35,187,838
35,188,093
+
zoonomia-rag-v1
sge|1:35187966:G>T|+
1
35,187,966
G
T
false
splicing
SFPQ
sge
urn:mavedb:00001265-a-1
0.009015
null
null
null
null
T
null
null
null
null
null
null
null
null
null
splicing_variant
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
splice_region_variant
splice_region_variant
ENSG00000116560
6
ENSG00000116560
6
6
ENSG00000116560
splice_region_variant
ENSG00000116560
5,178
ENSG00000116560
75
75
ENSG00000116560
splicing
urn:mavedb:00001265-a-1#81
NC_000001.11:g.35187966G>T
NA
NA
0.009015
chr1
35,187,966
G
SFPQ_X7
SFPQ_X7B
0.014983
0.038381
-0.020351
---
p-
p-
functionally_normal
0.00098
0.99902
PASS
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
Cell proliferation assay
Chemical-based transfection
Nuclease
SpCas9
Single-dimensional data
Loss of function
Immortalized human cells
Direct sequencing
Single-segment (short read)
Endogenous locus library method
null
normal
normal
Investigator-provided functional classes
null
1
0.009015
1:35187966:G>T
sge_00000004
35,187,965
35,187,838
35,188,093
CAAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTA
zoonomia-rag-direct-hal-v1
null
null
null
null
false
false
GL010061.1
14,197,946
14,198,201
+
true
true
TolMat_scaffold_339430
3,249
3,504
+
true
true
CM000179.6
111,552,699
111,552,954
-
true
true
CM000378.2
22,062,885
22,063,140
-
true
true
chr4
127,026,726
127,026,981
-
true
true
null
null
null
null
false
false
-
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
AGATGGAAGAACAAATGAGACGCCAAAGAGAGGAAAGTTACAGCAGGATGGGCTACATGGATCCAGTAAGTTGTCAAATTTGAGCTGCCTACAGAACTTGTAAGGAGCCCTGGTGGTACATTGGTTAAGCACTCAATTGCTAATTGAAAGGTTGGTGGTTCGAATCCGCCAGCAGAATCCGCTTGTAAAGATTACGGCCTAGGAAACCCTGTGGGGCAGTTCTACTCTGTGATAGGGTCACGGGAGGCAAACAGC
ATTTCCAGGCAAGAGGAAGAACGACGTAGAAGGGAGGAAGAGATGATGATTCGTCAACGTGAGATGGAAGAACAAATGAGACGCCAAAGAGAGGAAAGCTACAGCCGGATGGGCTACATGGATCCAGTAAGTTCACTTTTTTGCAGTCGTTGGAATTTTCTACAGAACTTGTGGGTACCTAGAATGAAGTTTTACCCAGTTAAATGAAAAATGTAATGTCTCACATTATAGCCATTATTTTCTTTATAATAGTTG
TTTCCAGGCAAGAGGAAGAACGACGTAGGAGGGAAGAAGAGATGATGATTCGTCAACGTGAGATGGAAGAACAGATGAGACGCCAAAGAGAGGAAAGTTATAGTCGGATGGGCTATATGGATCCAGTAAGTAAACTTTTGCAATGTAATCGGAGTTTTCTACAGAATTTGTGGATACCTAGGGTGCAGTTTATTCAGTTAAATGTCACTTTTCACATGGTAGCTATTCTACCTTTTTCTTTCTTTCTTTTTAACC
TGGATCCAGTAAGTATACTTCTGTTGTGATCTAATTGGAGTTGTCTATAAAACTTGTAGGTACCTAGAACGAAATGTTACTCAGTTAAGTAGAACATTTTGCATTATAGCTAATTTGTGTGTGTGTGTGAGGAAGACTGGCCCTGAGCTAACATGTGTTGCTAATCTTCTTTTTGCTTGAGGAAGATTGTCCCTGAGCTAACATCTGTGCCAATCTTCCTCTATTTTATATGTGGGACACCGCCACAGTACGGCT
ATGGATGACACTTTGTTTTATATGCCTGAAAAATATTTGTAGGCAAGAGGAGGAACGGCGTAGACGAGAGGAAGAGATGATGATTCGCCAACGTGAGATGGAAGAACAAATGAGACGCCAACGAGAAGAAAGTTACAGCAGGATGGGCTACATGGATCCAGTAAGTTTTTATCCATTGTAAGTGTACACTCACTCAGGCGTGGCTGTTTTGTTTTGTGTGTATAAACTCCTATCAGATCTTGCTGGACCAAATGC
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
TAGGCAAGAGGAGGAACGACGTAGAAGAGAGGAAGAGATGATGATTCGTCAACGTGAGATGGAAGAACAAATGAGGCGCCAAAGAGAGGAAAGTTACAGCCGAATGGGCTACATGGATCCAGTAAGTCAGCCTTTACTGCCTTCCAATTGGAGTTGTCTATAGAACTTGCAGGTACCTAGAAGGAATTACAGGAAATTTTAATATCAAATTACAGTTATTTTCTGCTTTTTTTCTAACAAAGTATATTATGTTTG
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN[SEQ]AGATGGAAGAACAAATGAGACGCCAAAGAGAGGAAAGTTACAGCAGGATGGGCTACATGG...
CAGCCTTTACTGCCTTCCAATTGGAGTTGTCTATAGAACTTGCAGGTACCTAGAAGGAATTACAGGAAATTTTAATATCAAATTACAGTTATTTTCTGCTTTTTTTCTAACAAAGTATATTATGTTTG
AAGCCTTTACTGCCTTCCAATTGGAGTTGTCTATAGAACTTGCAGGTACCTAGAAGGAATTACAGGAAATTTTAATATCAAATTACAGTTATTTTCTGCTTTTTTTCTAACAAAGTATATTATGTTTG
false
true
true
1
35,187,838
35,188,093
-
zoonomia-rag-v1
sge|1:35187966:G>T|-
1
35,187,967
A
C
true
splicing
SFPQ
sge
urn:mavedb:00001265-a-1
-0.166176
null
null
null
null
C
null
null
null
null
null
null
null
null
null
splicing_variant
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
splice_donor_region_variant
splice_donor_region_variant
ENSG00000116560
5
ENSG00000116560
5
5
ENSG00000116560
splice_donor_region_variant
ENSG00000116560
5,177
ENSG00000116560
74
74
ENSG00000116560
splicing
urn:mavedb:00001265-a-1#82
NC_000001.11:g.35187967A>C
NA
NA
-0.166176
chr1
35,187,967
A
SFPQ_X7
SFPQ_X7B
0.066515
-0.035806
-0.296546
---
p-
p-
functionally_abnormal
1
0
PASS
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
Cell proliferation assay
Chemical-based transfection
Nuclease
SpCas9
Single-dimensional data
Loss of function
Immortalized human cells
Direct sequencing
Single-segment (short read)
Endogenous locus library method
null
abnormal
abnormal
Investigator-provided functional classes
null
1
-0.166176
1:35187967:A>C
sge_00000005
35,187,966
35,187,839
35,188,094
AAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTAG
zoonomia-rag-direct-hal-v1
null
null
null
null
false
false
GL010061.1
14,197,947
14,198,202
+
true
true
TolMat_scaffold_339430
3,250
3,505
+
true
true
CM000179.6
111,552,698
111,552,953
-
true
true
CM000378.2
22,062,885
22,063,140
-
true
true
chr4
127,026,725
127,026,980
-
true
true
null
null
null
null
false
false
+
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
CTGTTTGCCTCCCGTGACCCTATCACAGAGTAGAACTGCCCCACAGGGTTTCCTAGGCCGTAATCTTTACAAGCGGATTCTGCTGGCGGATTCGAACCACCAACCTTTCAATTAGCAATTGAGTGCTTAACCAATGTACCACCAGGGCTCCTTACAAGTTCTGTAGGCAGCTCAAATTTGACAACTTACTGGATCCATGTAGCCCATCCTGCTGTAACTTTCCTCTCTTTGGCGTCTCATTTGTTCTTCCATCTC
AACTATTATAAAGAAAATAATGGCTATAATGTGAGACATTACATTTTTCATTTAACTGGGTAAAACTTCATTCTAGGTACCCACAAGTTCTGTAGAAAATTCCAACGACTGCAAAAAAGTGAACTTACTGGATCCATGTAGCCCATCCGGCTGTAGCTTTCCTCTCTTTGGCGTCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCCCTTCTACGTCGTTCTTCCTCTTGCCTGGAAATA
GTTAAAAAGAAAGAAAGAAAAAGGTAGAATAGCTACCATGTGAAAAGTGACATTTAACTGAATAAACTGCACCCTAGGTATCCACAAATTCTGTAGAAAACTCCGATTACATTGCAAAAGTTTACTTACTGGATCCATATAGCCCATCCGACTATAACTTTCCTCTCTTTGGCGTCTCATCTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCTTCCCTCCTACGTCGTTCTTCCTCTTGCCTGGAAAT
AGCCGTACTGTGGCGGTGTCCCACATATAAAATAGAGGAAGATTGGCACAGATGTTAGCTCAGGGACAATCTTCCTCAAGCAAAAAGAAGATTAGCAACACATGTTAGCTCAGGGCCAGTCTTCCTCACACACACACACAAATTAGCTATAATGCAAAATGTTCTACTTAACTGAGTAACATTTCGTTCTAGGTACCTACAAGTTTTATAGACAACTCCAATTAGATCACAACAGAAGTATACTTACTGGATCCA
CATTTGGTCCAGCAAGATCTGATAGGAGTTTATACACACAAAACAAAACAGCCACGCCTGAGTGAGTGTACACTTACAATGGATAAAAACTTACTGGATCCATGTAGCCCATCCTGCTGTAACTTTCTTCTCGTTGGCGTCTCATTTGTTCTTCCATCTCACGTTGGCGAATCATCATCTCTTCCTCTCGTCTACGCCGTTCCTCCTCTTGCCTACAAATATTTTTCAGGCATATAAAACAAAGTGTCATCCATG
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
AAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTAG
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN[SEQ]CTGTTTGCCTCCCGTGACCCTATCACAGAGTAGAACTGCCCCACAGGGTTTCCTAGGCCG...
ACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTAG
CCTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTAG
true
true
true
1
35,187,839
35,188,094
+
zoonomia-rag-v1
sge|1:35187967:A>C|+
1
35,187,967
A
C
true
splicing
SFPQ
sge
urn:mavedb:00001265-a-1
-0.166176
null
null
null
null
C
null
null
null
null
null
null
null
null
null
splicing_variant
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
splice_donor_region_variant
splice_donor_region_variant
ENSG00000116560
5
ENSG00000116560
5
5
ENSG00000116560
splice_donor_region_variant
ENSG00000116560
5,177
ENSG00000116560
74
74
ENSG00000116560
splicing
urn:mavedb:00001265-a-1#82
NC_000001.11:g.35187967A>C
NA
NA
-0.166176
chr1
35,187,967
A
SFPQ_X7
SFPQ_X7B
0.066515
-0.035806
-0.296546
---
p-
p-
functionally_abnormal
1
0
PASS
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
Cell proliferation assay
Chemical-based transfection
Nuclease
SpCas9
Single-dimensional data
Loss of function
Immortalized human cells
Direct sequencing
Single-segment (short read)
Endogenous locus library method
null
abnormal
abnormal
Investigator-provided functional classes
null
1
-0.166176
1:35187967:A>C
sge_00000005
35,187,966
35,187,839
35,188,094
AAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTAG
zoonomia-rag-direct-hal-v1
null
null
null
null
false
false
GL010061.1
14,197,947
14,198,202
+
true
true
TolMat_scaffold_339430
3,250
3,505
+
true
true
CM000179.6
111,552,698
111,552,953
-
true
true
CM000378.2
22,062,885
22,063,140
-
true
true
chr4
127,026,725
127,026,980
-
true
true
null
null
null
null
false
false
-
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
GAGATGGAAGAACAAATGAGACGCCAAAGAGAGGAAAGTTACAGCAGGATGGGCTACATGGATCCAGTAAGTTGTCAAATTTGAGCTGCCTACAGAACTTGTAAGGAGCCCTGGTGGTACATTGGTTAAGCACTCAATTGCTAATTGAAAGGTTGGTGGTTCGAATCCGCCAGCAGAATCCGCTTGTAAAGATTACGGCCTAGGAAACCCTGTGGGGCAGTTCTACTCTGTGATAGGGTCACGGGAGGCAAACAG
TATTTCCAGGCAAGAGGAAGAACGACGTAGAAGGGAGGAAGAGATGATGATTCGTCAACGTGAGATGGAAGAACAAATGAGACGCCAAAGAGAGGAAAGCTACAGCCGGATGGGCTACATGGATCCAGTAAGTTCACTTTTTTGCAGTCGTTGGAATTTTCTACAGAACTTGTGGGTACCTAGAATGAAGTTTTACCCAGTTAAATGAAAAATGTAATGTCTCACATTATAGCCATTATTTTCTTTATAATAGTT
ATTTCCAGGCAAGAGGAAGAACGACGTAGGAGGGAAGAAGAGATGATGATTCGTCAACGTGAGATGGAAGAACAGATGAGACGCCAAAGAGAGGAAAGTTATAGTCGGATGGGCTATATGGATCCAGTAAGTAAACTTTTGCAATGTAATCGGAGTTTTCTACAGAATTTGTGGATACCTAGGGTGCAGTTTATTCAGTTAAATGTCACTTTTCACATGGTAGCTATTCTACCTTTTTCTTTCTTTCTTTTTAAC
TGGATCCAGTAAGTATACTTCTGTTGTGATCTAATTGGAGTTGTCTATAAAACTTGTAGGTACCTAGAACGAAATGTTACTCAGTTAAGTAGAACATTTTGCATTATAGCTAATTTGTGTGTGTGTGTGAGGAAGACTGGCCCTGAGCTAACATGTGTTGCTAATCTTCTTTTTGCTTGAGGAAGATTGTCCCTGAGCTAACATCTGTGCCAATCTTCCTCTATTTTATATGTGGGACACCGCCACAGTACGGCT
CATGGATGACACTTTGTTTTATATGCCTGAAAAATATTTGTAGGCAAGAGGAGGAACGGCGTAGACGAGAGGAAGAGATGATGATTCGCCAACGTGAGATGGAAGAACAAATGAGACGCCAACGAGAAGAAAGTTACAGCAGGATGGGCTACATGGATCCAGTAAGTTTTTATCCATTGTAAGTGTACACTCACTCAGGCGTGGCTGTTTTGTTTTGTGTGTATAAACTCCTATCAGATCTTGCTGGACCAAATG
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
CTAGGCAAGAGGAGGAACGACGTAGAAGAGAGGAAGAGATGATGATTCGTCAACGTGAGATGGAAGAACAAATGAGGCGCCAAAGAGAGGAAAGTTACAGCCGAATGGGCTACATGGATCCAGTAAGTCAGCCTTTACTGCCTTCCAATTGGAGTTGTCTATAGAACTTGCAGGTACCTAGAAGGAATTACAGGAAATTTTAATATCAAATTACAGTTATTTTCTGCTTTTTTTCTAACAAAGTATATTATGTTT
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN[SEQ]GAGATGGAAGAACAAATGAGACGCCAAAGAGAGGAAAGTTACAGCAGGATGGGCTACATG...
TCAGCCTTTACTGCCTTCCAATTGGAGTTGTCTATAGAACTTGCAGGTACCTAGAAGGAATTACAGGAAATTTTAATATCAAATTACAGTTATTTTCTGCTTTTTTTCTAACAAAGTATATTATGTTT
GCAGCCTTTACTGCCTTCCAATTGGAGTTGTCTATAGAACTTGCAGGTACCTAGAAGGAATTACAGGAAATTTTAATATCAAATTACAGTTATTTTCTGCTTTTTTTCTAACAAAGTATATTATGTTT
true
true
true
1
35,187,839
35,188,094
-
zoonomia-rag-v1
sge|1:35187967:A>C|-
1
35,187,967
A
G
true
splicing
SFPQ
sge
urn:mavedb:00001265-a-1
-0.122606
null
null
null
null
G
null
null
null
null
null
null
null
null
null
splicing_variant
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
splice_donor_region_variant
splice_donor_region_variant
ENSG00000116560
5
ENSG00000116560
5
5
ENSG00000116560
splice_donor_region_variant
ENSG00000116560
5,177
ENSG00000116560
74
74
ENSG00000116560
splicing
urn:mavedb:00001265-a-1#83
NC_000001.11:g.35187967A>G
NA
NA
-0.122606
chr1
35,187,967
A
SFPQ_X7
SFPQ_X7B
0.067752
0.010187
-0.255399
---
p-
p-
functionally_abnormal
1
0
PASS
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
Cell proliferation assay
Chemical-based transfection
Nuclease
SpCas9
Single-dimensional data
Loss of function
Immortalized human cells
Direct sequencing
Single-segment (short read)
Endogenous locus library method
null
abnormal
abnormal
Investigator-provided functional classes
null
1
-0.122606
1:35187967:A>G
sge_00000006
35,187,966
35,187,839
35,188,094
AAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTAG
zoonomia-rag-direct-hal-v1
null
null
null
null
false
false
GL010061.1
14,197,947
14,198,202
+
true
true
TolMat_scaffold_339430
3,250
3,505
+
true
true
CM000179.6
111,552,698
111,552,953
-
true
true
CM000378.2
22,062,885
22,063,140
-
true
true
chr4
127,026,725
127,026,980
-
true
true
null
null
null
null
false
false
+
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
CTGTTTGCCTCCCGTGACCCTATCACAGAGTAGAACTGCCCCACAGGGTTTCCTAGGCCGTAATCTTTACAAGCGGATTCTGCTGGCGGATTCGAACCACCAACCTTTCAATTAGCAATTGAGTGCTTAACCAATGTACCACCAGGGCTCCTTACAAGTTCTGTAGGCAGCTCAAATTTGACAACTTACTGGATCCATGTAGCCCATCCTGCTGTAACTTTCCTCTCTTTGGCGTCTCATTTGTTCTTCCATCTC
AACTATTATAAAGAAAATAATGGCTATAATGTGAGACATTACATTTTTCATTTAACTGGGTAAAACTTCATTCTAGGTACCCACAAGTTCTGTAGAAAATTCCAACGACTGCAAAAAAGTGAACTTACTGGATCCATGTAGCCCATCCGGCTGTAGCTTTCCTCTCTTTGGCGTCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCCCTTCTACGTCGTTCTTCCTCTTGCCTGGAAATA
GTTAAAAAGAAAGAAAGAAAAAGGTAGAATAGCTACCATGTGAAAAGTGACATTTAACTGAATAAACTGCACCCTAGGTATCCACAAATTCTGTAGAAAACTCCGATTACATTGCAAAAGTTTACTTACTGGATCCATATAGCCCATCCGACTATAACTTTCCTCTCTTTGGCGTCTCATCTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCTTCCCTCCTACGTCGTTCTTCCTCTTGCCTGGAAAT
AGCCGTACTGTGGCGGTGTCCCACATATAAAATAGAGGAAGATTGGCACAGATGTTAGCTCAGGGACAATCTTCCTCAAGCAAAAAGAAGATTAGCAACACATGTTAGCTCAGGGCCAGTCTTCCTCACACACACACACAAATTAGCTATAATGCAAAATGTTCTACTTAACTGAGTAACATTTCGTTCTAGGTACCTACAAGTTTTATAGACAACTCCAATTAGATCACAACAGAAGTATACTTACTGGATCCA
CATTTGGTCCAGCAAGATCTGATAGGAGTTTATACACACAAAACAAAACAGCCACGCCTGAGTGAGTGTACACTTACAATGGATAAAAACTTACTGGATCCATGTAGCCCATCCTGCTGTAACTTTCTTCTCGTTGGCGTCTCATTTGTTCTTCCATCTCACGTTGGCGAATCATCATCTCTTCCTCTCGTCTACGCCGTTCCTCCTCTTGCCTACAAATATTTTTCAGGCATATAAAACAAAGTGTCATCCATG
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
AAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTAG
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN[SEQ]CTGTTTGCCTCCCGTGACCCTATCACAGAGTAGAACTGCCCCACAGGGTTTCCTAGGCCG...
ACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTAG
GCTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTAG
true
true
true
1
35,187,839
35,188,094
+
zoonomia-rag-v1
sge|1:35187967:A>G|+
1
35,187,967
A
G
true
splicing
SFPQ
sge
urn:mavedb:00001265-a-1
-0.122606
null
null
null
null
G
null
null
null
null
null
null
null
null
null
splicing_variant
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
splice_donor_region_variant
splice_donor_region_variant
ENSG00000116560
5
ENSG00000116560
5
5
ENSG00000116560
splice_donor_region_variant
ENSG00000116560
5,177
ENSG00000116560
74
74
ENSG00000116560
splicing
urn:mavedb:00001265-a-1#83
NC_000001.11:g.35187967A>G
NA
NA
-0.122606
chr1
35,187,967
A
SFPQ_X7
SFPQ_X7B
0.067752
0.010187
-0.255399
---
p-
p-
functionally_abnormal
1
0
PASS
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
Cell proliferation assay
Chemical-based transfection
Nuclease
SpCas9
Single-dimensional data
Loss of function
Immortalized human cells
Direct sequencing
Single-segment (short read)
Endogenous locus library method
null
abnormal
abnormal
Investigator-provided functional classes
null
1
-0.122606
1:35187967:A>G
sge_00000006
35,187,966
35,187,839
35,188,094
AAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTAG
zoonomia-rag-direct-hal-v1
null
null
null
null
false
false
GL010061.1
14,197,947
14,198,202
+
true
true
TolMat_scaffold_339430
3,250
3,505
+
true
true
CM000179.6
111,552,698
111,552,953
-
true
true
CM000378.2
22,062,885
22,063,140
-
true
true
chr4
127,026,725
127,026,980
-
true
true
null
null
null
null
false
false
-
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
GAGATGGAAGAACAAATGAGACGCCAAAGAGAGGAAAGTTACAGCAGGATGGGCTACATGGATCCAGTAAGTTGTCAAATTTGAGCTGCCTACAGAACTTGTAAGGAGCCCTGGTGGTACATTGGTTAAGCACTCAATTGCTAATTGAAAGGTTGGTGGTTCGAATCCGCCAGCAGAATCCGCTTGTAAAGATTACGGCCTAGGAAACCCTGTGGGGCAGTTCTACTCTGTGATAGGGTCACGGGAGGCAAACAG
TATTTCCAGGCAAGAGGAAGAACGACGTAGAAGGGAGGAAGAGATGATGATTCGTCAACGTGAGATGGAAGAACAAATGAGACGCCAAAGAGAGGAAAGCTACAGCCGGATGGGCTACATGGATCCAGTAAGTTCACTTTTTTGCAGTCGTTGGAATTTTCTACAGAACTTGTGGGTACCTAGAATGAAGTTTTACCCAGTTAAATGAAAAATGTAATGTCTCACATTATAGCCATTATTTTCTTTATAATAGTT
ATTTCCAGGCAAGAGGAAGAACGACGTAGGAGGGAAGAAGAGATGATGATTCGTCAACGTGAGATGGAAGAACAGATGAGACGCCAAAGAGAGGAAAGTTATAGTCGGATGGGCTATATGGATCCAGTAAGTAAACTTTTGCAATGTAATCGGAGTTTTCTACAGAATTTGTGGATACCTAGGGTGCAGTTTATTCAGTTAAATGTCACTTTTCACATGGTAGCTATTCTACCTTTTTCTTTCTTTCTTTTTAAC
TGGATCCAGTAAGTATACTTCTGTTGTGATCTAATTGGAGTTGTCTATAAAACTTGTAGGTACCTAGAACGAAATGTTACTCAGTTAAGTAGAACATTTTGCATTATAGCTAATTTGTGTGTGTGTGTGAGGAAGACTGGCCCTGAGCTAACATGTGTTGCTAATCTTCTTTTTGCTTGAGGAAGATTGTCCCTGAGCTAACATCTGTGCCAATCTTCCTCTATTTTATATGTGGGACACCGCCACAGTACGGCT
CATGGATGACACTTTGTTTTATATGCCTGAAAAATATTTGTAGGCAAGAGGAGGAACGGCGTAGACGAGAGGAAGAGATGATGATTCGCCAACGTGAGATGGAAGAACAAATGAGACGCCAACGAGAAGAAAGTTACAGCAGGATGGGCTACATGGATCCAGTAAGTTTTTATCCATTGTAAGTGTACACTCACTCAGGCGTGGCTGTTTTGTTTTGTGTGTATAAACTCCTATCAGATCTTGCTGGACCAAATG
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
CTAGGCAAGAGGAGGAACGACGTAGAAGAGAGGAAGAGATGATGATTCGTCAACGTGAGATGGAAGAACAAATGAGGCGCCAAAGAGAGGAAAGTTACAGCCGAATGGGCTACATGGATCCAGTAAGTCAGCCTTTACTGCCTTCCAATTGGAGTTGTCTATAGAACTTGCAGGTACCTAGAAGGAATTACAGGAAATTTTAATATCAAATTACAGTTATTTTCTGCTTTTTTTCTAACAAAGTATATTATGTTT
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN[SEQ]GAGATGGAAGAACAAATGAGACGCCAAAGAGAGGAAAGTTACAGCAGGATGGGCTACATG...
TCAGCCTTTACTGCCTTCCAATTGGAGTTGTCTATAGAACTTGCAGGTACCTAGAAGGAATTACAGGAAATTTTAATATCAAATTACAGTTATTTTCTGCTTTTTTTCTAACAAAGTATATTATGTTT
CCAGCCTTTACTGCCTTCCAATTGGAGTTGTCTATAGAACTTGCAGGTACCTAGAAGGAATTACAGGAAATTTTAATATCAAATTACAGTTATTTTCTGCTTTTTTTCTAACAAAGTATATTATGTTT
true
true
true
1
35,187,839
35,188,094
-
zoonomia-rag-v1
sge|1:35187967:A>G|-
1
35,187,967
A
T
true
splicing
SFPQ
sge
urn:mavedb:00001265-a-1
-0.215358
null
null
null
null
T
null
null
null
null
null
null
null
null
null
splicing_variant
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
splice_donor_region_variant
splice_donor_region_variant
ENSG00000116560
5
ENSG00000116560
5
5
ENSG00000116560
splice_donor_region_variant
ENSG00000116560
5,177
ENSG00000116560
74
74
ENSG00000116560
splicing
urn:mavedb:00001265-a-1#84
NC_000001.11:g.35187967A>T
NA
NA
-0.215358
chr1
35,187,967
A
SFPQ_X7
SFPQ_X7B
0.068086
-0.08191
-0.348807
---
p-
p-
functionally_abnormal
1
0
PASS
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
Cell proliferation assay
Chemical-based transfection
Nuclease
SpCas9
Single-dimensional data
Loss of function
Immortalized human cells
Direct sequencing
Single-segment (short read)
Endogenous locus library method
null
abnormal
abnormal
Investigator-provided functional classes
null
1
-0.215358
1:35187967:A>T
sge_00000007
35,187,966
35,187,839
35,188,094
AAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTAG
zoonomia-rag-direct-hal-v1
null
null
null
null
false
false
GL010061.1
14,197,947
14,198,202
+
true
true
TolMat_scaffold_339430
3,250
3,505
+
true
true
CM000179.6
111,552,698
111,552,953
-
true
true
CM000378.2
22,062,885
22,063,140
-
true
true
chr4
127,026,725
127,026,980
-
true
true
null
null
null
null
false
false
+
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
CTGTTTGCCTCCCGTGACCCTATCACAGAGTAGAACTGCCCCACAGGGTTTCCTAGGCCGTAATCTTTACAAGCGGATTCTGCTGGCGGATTCGAACCACCAACCTTTCAATTAGCAATTGAGTGCTTAACCAATGTACCACCAGGGCTCCTTACAAGTTCTGTAGGCAGCTCAAATTTGACAACTTACTGGATCCATGTAGCCCATCCTGCTGTAACTTTCCTCTCTTTGGCGTCTCATTTGTTCTTCCATCTC
AACTATTATAAAGAAAATAATGGCTATAATGTGAGACATTACATTTTTCATTTAACTGGGTAAAACTTCATTCTAGGTACCCACAAGTTCTGTAGAAAATTCCAACGACTGCAAAAAAGTGAACTTACTGGATCCATGTAGCCCATCCGGCTGTAGCTTTCCTCTCTTTGGCGTCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCCCTTCTACGTCGTTCTTCCTCTTGCCTGGAAATA
GTTAAAAAGAAAGAAAGAAAAAGGTAGAATAGCTACCATGTGAAAAGTGACATTTAACTGAATAAACTGCACCCTAGGTATCCACAAATTCTGTAGAAAACTCCGATTACATTGCAAAAGTTTACTTACTGGATCCATATAGCCCATCCGACTATAACTTTCCTCTCTTTGGCGTCTCATCTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCTTCCCTCCTACGTCGTTCTTCCTCTTGCCTGGAAAT
AGCCGTACTGTGGCGGTGTCCCACATATAAAATAGAGGAAGATTGGCACAGATGTTAGCTCAGGGACAATCTTCCTCAAGCAAAAAGAAGATTAGCAACACATGTTAGCTCAGGGCCAGTCTTCCTCACACACACACACAAATTAGCTATAATGCAAAATGTTCTACTTAACTGAGTAACATTTCGTTCTAGGTACCTACAAGTTTTATAGACAACTCCAATTAGATCACAACAGAAGTATACTTACTGGATCCA
CATTTGGTCCAGCAAGATCTGATAGGAGTTTATACACACAAAACAAAACAGCCACGCCTGAGTGAGTGTACACTTACAATGGATAAAAACTTACTGGATCCATGTAGCCCATCCTGCTGTAACTTTCTTCTCGTTGGCGTCTCATTTGTTCTTCCATCTCACGTTGGCGAATCATCATCTCTTCCTCTCGTCTACGCCGTTCCTCCTCTTGCCTACAAATATTTTTCAGGCATATAAAACAAAGTGTCATCCATG
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
AAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTAG
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN[SEQ]CTGTTTGCCTCCCGTGACCCTATCACAGAGTAGAACTGCCCCACAGGGTTTCCTAGGCCG...
ACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTAG
TCTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTAG
true
true
true
1
35,187,839
35,188,094
+
zoonomia-rag-v1
sge|1:35187967:A>T|+
End of preview. Expand in Data Studio

marin-dna/evals_sge_rag_harness_255_v1

Retrieval-conditioned, eval-harness-ready SGE SNV benchmark for the MarinDNA SGE leaderboard. Each row contains seven fully materialized Zoonomia ortholog slots, the shared 127-base human prefix, and separate reference/alternate completions. Every source variant has forward and reverse-complement rows.

Produced by the commit-pinned issue #402 RAG pipeline.

Split Source variants Materialized rows
train 23,853 47,706
test 14,888 29,776

Frozen document contract

  • Species order/version: zoonomia-rag-v1; human is slot 7.
  • Projection/version: zoonomia-rag-direct-hal-v1.
  • context is 1,919 tokens before BOS: seven 255-base non-human slots, seven atomic [SEQ] boundaries, and the shared 127-base human prefix.
  • Each completion is 128 bases; BOS + context + completion is exactly 2,048 tokens.
  • The centered SNV is absolute token index 1920.
  • Missing projections are exactly 255 N bases.

Every exact unique human window was projected directly with halLiftover --noDupes against the pinned Zoonomia 447-mammalian 2022 v1 HAL, then filtered and strand-normalized with the same issue #402 quality contract. Model scoring needs only this pinned dataset and a checkpoint.

Provenance

  • Source: marin-dna/evals_sge at 225d3d1ea32a4af547891b13c33b5e92a5aae849 (GRCh38, source pos is 1-based).
  • Score protocol: minus_llr.
  • Alignment source leaf: Homo_sapiens.
  • Derived genomic coordinates: 0-based, half-open.

manifest.json records exact revisions, counts, projection settings, and per-species availability. All original source columns are retained.

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