Datasets:
chrom large_string | pos int64 | ref large_string | alt large_string | label bool | subset large_string | gene large_string | assay large_string | mavedb_urn large_string | function_score float64 | author_gene large_string | author_chromosome int64 | author_position_hg19 int64 | author_reference large_string | author_alt large_string | author_transcript_id large_string | author_transcript_position large_string | author_transcript_ref large_string | author_transcript_alt large_string | author_transcript_variant large_string | author_aa_pos float64 | author_aa_ref large_string | author_aa_alt large_string | author_protein_variant large_string | author_consequence large_string | author_function_score_mean float64 | author_func_class large_string | author_p_nonfunctional float64 | author_experiment large_string | author_negative int64 | author_library int64 | author_d5_r1 int64 | author_d11_r1 int64 | author_d5_r2 int64 | author_d11_r2 int64 | author_neg_freq float64 | author_library_freq float64 | author_d5_freq_r1 float64 | author_d11_freq_r1 float64 | author_d5_freq_r2 float64 | author_d11_freq_r2 float64 | author_d5_lib_ratio_r1 float64 | author_loess_fit_r1 float64 | author_d11_lib_raw_r1 float64 | author_d11_lib_loess_r1 float64 | author_d5_lib_ratio_r2 float64 | author_loess_fit_r2 float64 | author_d11_lib_raw_r2 float64 | author_d11_lib_loess_r2 float64 | author_function_score_r1 float64 | author_function_score_r2 float64 | author_rna_r1 float64 | author_rna_r2 float64 | author_rna_r1_freq float64 | author_rna_r2_freq float64 | author_rna_score_1 float64 | author_rna_score_2 float64 | author_mean_rna_score float64 | author_cadd_score float64 | author_phylop_mammalian float64 | author_polyphen2 float64 | author_sift float64 | author_agvgd_diff float64 | author_agvgd_class float64 | author_clinvar large_string | author_clinvar_simple large_string | author_gnomad_af float64 | author_bravo_af float64 | author_flossies_af float64 | author_wt_hap1_function_score_r1 float64 | author_wt_hap1_function_score_r2 float64 | author_wt_hap1_function_score_mean float64 | consequence large_string | consequence_cre large_string | exon_closest_pc_gene_id large_string | distance_exon_pc int64 | exon_closest_nc_gene_id large_string | distance_exon_nc int64 | distance_exon int64 | exon_closest_gene_id large_string | consequence_final large_string | tss_closest_pc_gene_id large_string | distance_tss_pc int64 | tss_closest_nc_gene_id large_string | distance_tss_nc int64 | distance_tss int64 | tss_closest_gene_id large_string | consequence_group large_string | author_accession large_string | author_hgvs_nt large_string | author_hgvs_splice large_string | author_hgvs_pro large_string | author_score float64 | author_chrom large_string | author_pos int64 | author_ref large_string | author_exon large_string | author_target large_string | author_standard_error float64 | author_95_ci_upper float64 | author_95_ci_lower float64 | author_amino_acid_change large_string | author_cds_position large_string | author_cdna_position large_string | author_functional_consequence large_string | author_gmm_density_abnormal float64 | author_gmm_density_normal float64 | author_variant_qc_flag large_string | author_functional_classification large_string | author_z_score_d4_d7 float64 | author_z_score_continuous float64 | author_bh_fdr_d4_d7 float64 | author_bh_fdr_d4_d14 float64 | author_bh_fdr_continuous float64 | author_processed_adj_lfc_d4_d7 float64 | author_processed_adj_lfc_d4_d14 float64 | author_processed_adj_lfc_continuous float64 | author_two_tailed_p_d4_d7 float64 | author_two_tailed_p_d4_d14 float64 | author_two_tailed_p_continuous float64 | author_se_bind_d4_d7 float64 | author_se_bind_d4_d14 float64 | author_se_bind_continuous float64 | author_gmm_fast_depleted_z large_string | author_gmm_slow_depleted_z large_string | author_gmm_uncertainty large_string | author_processed_lfc_d4_d7 float64 | author_processed_lfc_d4_d10 float64 | author_processed_lfc_d4_d14 float64 | author_processed_lfc_d4_d21 float64 | author_processed_lfc_continuous float64 | author_se_bind_d4_d10 float64 | author_se_bind_d4_d21 float64 | author_processed_z_d4_d7 float64 | author_processed_z_d4_d10 float64 | author_processed_z_d4_d14 float64 | author_processed_z_d4_d21 float64 | author_processed_z_continuous float64 | author_processed_bh_fdr_d4_d7 float64 | author_processed_bh_fdr_d4_d10 float64 | author_processed_bh_fdr_d4_d14 float64 | author_processed_bh_fdr_d4_d21 float64 | author_processed_bh_fdr_continuous float64 | author_confidence_of_functionally_abnormal_variant_prediction large_string | author_sge_prediction_of_variant_function_in_ndd_context large_string | author_protein_position large_string | author_score_no_dab large_string | author_score_hap1_hif1a_ko large_string | author_rna_score_d6 large_string | author_rna_score_d20 large_string | assay_phenotypic_assay_method large_string | assay_delivery_method large_string | assay_endogenous_locus_library_method_mechanism large_string | assay_endogenous_locus_library_method_system large_string | assay_phenotypic_assay_dimensionality large_string | assay_phenotypic_assay_mechanism large_string | assay_phenotypic_assay_model_system large_string | assay_phenotypic_assay_profiling_strategy large_string | assay_phenotypic_assay_sequencing_read_type large_string | assay_variant_library_creation_method large_string | assay_molecular_mechanism_assessed large_string | author_class_harmonized large_string | calibrated_class large_string | calibration_scheme large_string | acmg_strength large_string | function_direction int8 | function_score_aligned float64 | variant_id large_string | query_name large_string | variant_pos0 int64 | human_start int64 | human_end int64 | human_reference_sequence large_string | projection_version large_string | projection_chrom_0 large_string | projection_start_0 int64 | projection_end_0 int64 | projection_strand_0 large_string | available_0 bool | quality_pass_0 bool | projection_chrom_1 large_string | projection_start_1 int64 | projection_end_1 int64 | projection_strand_1 large_string | available_1 bool | quality_pass_1 bool | projection_chrom_2 large_string | projection_start_2 int64 | projection_end_2 int64 | projection_strand_2 large_string | available_2 bool | quality_pass_2 bool | projection_chrom_3 large_string | projection_start_3 int64 | projection_end_3 int64 | projection_strand_3 large_string | available_3 bool | quality_pass_3 bool | projection_chrom_4 large_string | projection_start_4 int64 | projection_end_4 int64 | projection_strand_4 large_string | available_4 bool | quality_pass_4 bool | projection_chrom_5 large_string | projection_start_5 int64 | projection_end_5 int64 | projection_strand_5 large_string | available_5 bool | quality_pass_5 bool | projection_chrom_6 large_string | projection_start_6 int64 | projection_end_6 int64 | projection_strand_6 large_string | available_6 bool | quality_pass_6 bool | strand large_string | sequence_0 large_string | sequence_1 large_string | sequence_2 large_string | sequence_3 large_string | sequence_4 large_string | sequence_5 large_string | sequence_6 large_string | sequence_7 large_string | context large_string | ref_completion large_string | alt_completion large_string | target bool | available_7 bool | quality_pass_7 bool | projection_chrom_7 large_string | projection_start_7 int64 | projection_end_7 int64 | projection_strand_7 large_string | species_order_version large_string | document_id large_string |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | 35,187,965 | T | A | false | splicing | SFPQ | sge | urn:mavedb:00001265-a-1 | 0.025045 | null | null | null | null | A | null | null | null | null | null | null | null | null | null | splicing_variant | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | splice_region_variant | splice_region_variant | ENSG00000116560 | 7 | ENSG00000116560 | 7 | 7 | ENSG00000116560 | splice_region_variant | ENSG00000116560 | 5,179 | ENSG00000116560 | 76 | 76 | ENSG00000116560 | splicing | urn:mavedb:00001265-a-1#76 | NC_000001.11:g.35187965T>A | NA | NA | 0.025045 | chr1 | 35,187,965 | T | SFPQ_X7 | SFPQ_X7B | 0.014107 | 0.052694 | -0.002605 | --- | p- | p- | functionally_normal | 0.001065 | 0.998935 | PASS | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | Cell proliferation assay | Chemical-based transfection | Nuclease | SpCas9 | Single-dimensional data | Loss of function | Immortalized human cells | Direct sequencing | Single-segment (short read) | Endogenous locus library method | null | normal | normal | Investigator-provided functional classes | null | 1 | 0.025045 | 1:35187965:T>A | sge_00000000 | 35,187,964 | 35,187,837 | 35,188,092 | TCAAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCT | zoonomia-rag-direct-hal-v1 | null | null | null | null | false | false | GL010061.1 | 14,197,946 | 14,198,201 | + | true | true | TolMat_scaffold_339430 | 3,249 | 3,504 | + | true | true | CM000179.6 | 111,552,699 | 111,552,954 | - | true | true | CM000378.2 | 22,062,886 | 22,063,141 | - | true | true | chr4 | 127,026,726 | 127,026,981 | - | true | true | null | null | null | null | false | false | + | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | GCTGTTTGCCTCCCGTGACCCTATCACAGAGTAGAACTGCCCCACAGGGTTTCCTAGGCCGTAATCTTTACAAGCGGATTCTGCTGGCGGATTCGAACCACCAACCTTTCAATTAGCAATTGAGTGCTTAACCAATGTACCACCAGGGCTCCTTACAAGTTCTGTAGGCAGCTCAAATTTGACAACTTACTGGATCCATGTAGCCCATCCTGCTGTAACTTTCCTCTCTTTGGCGTCTCATTTGTTCTTCCATCT | CAACTATTATAAAGAAAATAATGGCTATAATGTGAGACATTACATTTTTCATTTAACTGGGTAAAACTTCATTCTAGGTACCCACAAGTTCTGTAGAAAATTCCAACGACTGCAAAAAAGTGAACTTACTGGATCCATGTAGCCCATCCGGCTGTAGCTTTCCTCTCTTTGGCGTCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCCCTTCTACGTCGTTCTTCCTCTTGCCTGGAAAT | GGTTAAAAAGAAAGAAAGAAAAAGGTAGAATAGCTACCATGTGAAAAGTGACATTTAACTGAATAAACTGCACCCTAGGTATCCACAAATTCTGTAGAAAACTCCGATTACATTGCAAAAGTTTACTTACTGGATCCATATAGCCCATCCGACTATAACTTTCCTCTCTTTGGCGTCTCATCTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCTTCCCTCCTACGTCGTTCTTCCTCTTGCCTGGAAA | AAGCCGTACTGTGGCGGTGTCCCACATATAAAATAGAGGAAGATTGGCACAGATGTTAGCTCAGGGACAATCTTCCTCAAGCAAAAAGAAGATTAGCAACACATGTTAGCTCAGGGCCAGTCTTCCTCACACACACACACAAATTAGCTATAATGCAAAATGTTCTACTTAACTGAGTAACATTTCGTTCTAGGTACCTACAAGTTTTATAGACAACTCCAATTAGATCACAACAGAAGTATACTTACTGGATCC | GCATTTGGTCCAGCAAGATCTGATAGGAGTTTATACACACAAAACAAAACAGCCACGCCTGAGTGAGTGTACACTTACAATGGATAAAAACTTACTGGATCCATGTAGCCCATCCTGCTGTAACTTTCTTCTCGTTGGCGTCTCATTTGTTCTTCCATCTCACGTTGGCGAATCATCATCTCTTCCTCTCGTCTACGCCGTTCCTCCTCTTGCCTACAAATATTTTTCAGGCATATAAAACAAAGTGTCATCCAT | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | TCAAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCT | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN[SEQ]GCTGTTTGCCTCCCGTGACCCTATCACAGAGTAGAACTGCCCCACAGGGTTTCCTAGGCC... | TGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCT | AGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCT | false | true | true | 1 | 35,187,837 | 35,188,092 | + | zoonomia-rag-v1 | sge|1:35187965:T>A|+ |
1 | 35,187,965 | T | A | false | splicing | SFPQ | sge | urn:mavedb:00001265-a-1 | 0.025045 | null | null | null | null | A | null | null | null | null | null | null | null | null | null | splicing_variant | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | splice_region_variant | splice_region_variant | ENSG00000116560 | 7 | ENSG00000116560 | 7 | 7 | ENSG00000116560 | splice_region_variant | ENSG00000116560 | 5,179 | ENSG00000116560 | 76 | 76 | ENSG00000116560 | splicing | urn:mavedb:00001265-a-1#76 | NC_000001.11:g.35187965T>A | NA | NA | 0.025045 | chr1 | 35,187,965 | T | SFPQ_X7 | SFPQ_X7B | 0.014107 | 0.052694 | -0.002605 | --- | p- | p- | functionally_normal | 0.001065 | 0.998935 | PASS | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | Cell proliferation assay | Chemical-based transfection | Nuclease | SpCas9 | Single-dimensional data | Loss of function | Immortalized human cells | Direct sequencing | Single-segment (short read) | Endogenous locus library method | null | normal | normal | Investigator-provided functional classes | null | 1 | 0.025045 | 1:35187965:T>A | sge_00000000 | 35,187,964 | 35,187,837 | 35,188,092 | TCAAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCT | zoonomia-rag-direct-hal-v1 | null | null | null | null | false | false | GL010061.1 | 14,197,946 | 14,198,201 | + | true | true | TolMat_scaffold_339430 | 3,249 | 3,504 | + | true | true | CM000179.6 | 111,552,699 | 111,552,954 | - | true | true | CM000378.2 | 22,062,886 | 22,063,141 | - | true | true | chr4 | 127,026,726 | 127,026,981 | - | true | true | null | null | null | null | false | false | - | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | AGATGGAAGAACAAATGAGACGCCAAAGAGAGGAAAGTTACAGCAGGATGGGCTACATGGATCCAGTAAGTTGTCAAATTTGAGCTGCCTACAGAACTTGTAAGGAGCCCTGGTGGTACATTGGTTAAGCACTCAATTGCTAATTGAAAGGTTGGTGGTTCGAATCCGCCAGCAGAATCCGCTTGTAAAGATTACGGCCTAGGAAACCCTGTGGGGCAGTTCTACTCTGTGATAGGGTCACGGGAGGCAAACAGC | ATTTCCAGGCAAGAGGAAGAACGACGTAGAAGGGAGGAAGAGATGATGATTCGTCAACGTGAGATGGAAGAACAAATGAGACGCCAAAGAGAGGAAAGCTACAGCCGGATGGGCTACATGGATCCAGTAAGTTCACTTTTTTGCAGTCGTTGGAATTTTCTACAGAACTTGTGGGTACCTAGAATGAAGTTTTACCCAGTTAAATGAAAAATGTAATGTCTCACATTATAGCCATTATTTTCTTTATAATAGTTG | TTTCCAGGCAAGAGGAAGAACGACGTAGGAGGGAAGAAGAGATGATGATTCGTCAACGTGAGATGGAAGAACAGATGAGACGCCAAAGAGAGGAAAGTTATAGTCGGATGGGCTATATGGATCCAGTAAGTAAACTTTTGCAATGTAATCGGAGTTTTCTACAGAATTTGTGGATACCTAGGGTGCAGTTTATTCAGTTAAATGTCACTTTTCACATGGTAGCTATTCTACCTTTTTCTTTCTTTCTTTTTAACC | GGATCCAGTAAGTATACTTCTGTTGTGATCTAATTGGAGTTGTCTATAAAACTTGTAGGTACCTAGAACGAAATGTTACTCAGTTAAGTAGAACATTTTGCATTATAGCTAATTTGTGTGTGTGTGTGAGGAAGACTGGCCCTGAGCTAACATGTGTTGCTAATCTTCTTTTTGCTTGAGGAAGATTGTCCCTGAGCTAACATCTGTGCCAATCTTCCTCTATTTTATATGTGGGACACCGCCACAGTACGGCTT | ATGGATGACACTTTGTTTTATATGCCTGAAAAATATTTGTAGGCAAGAGGAGGAACGGCGTAGACGAGAGGAAGAGATGATGATTCGCCAACGTGAGATGGAAGAACAAATGAGACGCCAACGAGAAGAAAGTTACAGCAGGATGGGCTACATGGATCCAGTAAGTTTTTATCCATTGTAAGTGTACACTCACTCAGGCGTGGCTGTTTTGTTTTGTGTGTATAAACTCCTATCAGATCTTGCTGGACCAAATGC | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | AGGCAAGAGGAGGAACGACGTAGAAGAGAGGAAGAGATGATGATTCGTCAACGTGAGATGGAAGAACAAATGAGGCGCCAAAGAGAGGAAAGTTACAGCCGAATGGGCTACATGGATCCAGTAAGTCAGCCTTTACTGCCTTCCAATTGGAGTTGTCTATAGAACTTGCAGGTACCTAGAAGGAATTACAGGAAATTTTAATATCAAATTACAGTTATTTTCTGCTTTTTTTCTAACAAAGTATATTATGTTTGA | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN[SEQ]AGATGGAAGAACAAATGAGACGCCAAAGAGAGGAAAGTTACAGCAGGATGGGCTACATGG... | AGCCTTTACTGCCTTCCAATTGGAGTTGTCTATAGAACTTGCAGGTACCTAGAAGGAATTACAGGAAATTTTAATATCAAATTACAGTTATTTTCTGCTTTTTTTCTAACAAAGTATATTATGTTTGA | TGCCTTTACTGCCTTCCAATTGGAGTTGTCTATAGAACTTGCAGGTACCTAGAAGGAATTACAGGAAATTTTAATATCAAATTACAGTTATTTTCTGCTTTTTTTCTAACAAAGTATATTATGTTTGA | false | true | true | 1 | 35,187,837 | 35,188,092 | - | zoonomia-rag-v1 | sge|1:35187965:T>A|- |
1 | 35,187,965 | T | G | false | splicing | SFPQ | sge | urn:mavedb:00001265-a-1 | 0.005667 | null | null | null | null | G | null | null | null | null | null | null | null | null | null | splicing_variant | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | splice_region_variant | splice_region_variant | ENSG00000116560 | 7 | ENSG00000116560 | 7 | 7 | ENSG00000116560 | splice_region_variant | ENSG00000116560 | 5,179 | ENSG00000116560 | 76 | 76 | ENSG00000116560 | splicing | urn:mavedb:00001265-a-1#78 | NC_000001.11:g.35187965T>G | NA | NA | 0.005667 | chr1 | 35,187,965 | T | SFPQ_X7 | SFPQ_X7B | 0.009661 | 0.024602 | -0.013268 | --- | p- | p- | functionally_normal | 0.001202 | 0.998798 | PASS | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | Cell proliferation assay | Chemical-based transfection | Nuclease | SpCas9 | Single-dimensional data | Loss of function | Immortalized human cells | Direct sequencing | Single-segment (short read) | Endogenous locus library method | null | normal | normal | Investigator-provided functional classes | null | 1 | 0.005667 | 1:35187965:T>G | sge_00000001 | 35,187,964 | 35,187,837 | 35,188,092 | TCAAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCT | zoonomia-rag-direct-hal-v1 | null | null | null | null | false | false | GL010061.1 | 14,197,946 | 14,198,201 | + | true | true | TolMat_scaffold_339430 | 3,249 | 3,504 | + | true | true | CM000179.6 | 111,552,699 | 111,552,954 | - | true | true | CM000378.2 | 22,062,886 | 22,063,141 | - | true | true | chr4 | 127,026,726 | 127,026,981 | - | true | true | null | null | null | null | false | false | + | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | GCTGTTTGCCTCCCGTGACCCTATCACAGAGTAGAACTGCCCCACAGGGTTTCCTAGGCCGTAATCTTTACAAGCGGATTCTGCTGGCGGATTCGAACCACCAACCTTTCAATTAGCAATTGAGTGCTTAACCAATGTACCACCAGGGCTCCTTACAAGTTCTGTAGGCAGCTCAAATTTGACAACTTACTGGATCCATGTAGCCCATCCTGCTGTAACTTTCCTCTCTTTGGCGTCTCATTTGTTCTTCCATCT | CAACTATTATAAAGAAAATAATGGCTATAATGTGAGACATTACATTTTTCATTTAACTGGGTAAAACTTCATTCTAGGTACCCACAAGTTCTGTAGAAAATTCCAACGACTGCAAAAAAGTGAACTTACTGGATCCATGTAGCCCATCCGGCTGTAGCTTTCCTCTCTTTGGCGTCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCCCTTCTACGTCGTTCTTCCTCTTGCCTGGAAAT | GGTTAAAAAGAAAGAAAGAAAAAGGTAGAATAGCTACCATGTGAAAAGTGACATTTAACTGAATAAACTGCACCCTAGGTATCCACAAATTCTGTAGAAAACTCCGATTACATTGCAAAAGTTTACTTACTGGATCCATATAGCCCATCCGACTATAACTTTCCTCTCTTTGGCGTCTCATCTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCTTCCCTCCTACGTCGTTCTTCCTCTTGCCTGGAAA | AAGCCGTACTGTGGCGGTGTCCCACATATAAAATAGAGGAAGATTGGCACAGATGTTAGCTCAGGGACAATCTTCCTCAAGCAAAAAGAAGATTAGCAACACATGTTAGCTCAGGGCCAGTCTTCCTCACACACACACACAAATTAGCTATAATGCAAAATGTTCTACTTAACTGAGTAACATTTCGTTCTAGGTACCTACAAGTTTTATAGACAACTCCAATTAGATCACAACAGAAGTATACTTACTGGATCC | GCATTTGGTCCAGCAAGATCTGATAGGAGTTTATACACACAAAACAAAACAGCCACGCCTGAGTGAGTGTACACTTACAATGGATAAAAACTTACTGGATCCATGTAGCCCATCCTGCTGTAACTTTCTTCTCGTTGGCGTCTCATTTGTTCTTCCATCTCACGTTGGCGAATCATCATCTCTTCCTCTCGTCTACGCCGTTCCTCCTCTTGCCTACAAATATTTTTCAGGCATATAAAACAAAGTGTCATCCAT | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | TCAAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCT | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN[SEQ]GCTGTTTGCCTCCCGTGACCCTATCACAGAGTAGAACTGCCCCACAGGGTTTCCTAGGCC... | TGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCT | GGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCT | false | true | true | 1 | 35,187,837 | 35,188,092 | + | zoonomia-rag-v1 | sge|1:35187965:T>G|+ |
1 | 35,187,965 | T | G | false | splicing | SFPQ | sge | urn:mavedb:00001265-a-1 | 0.005667 | null | null | null | null | G | null | null | null | null | null | null | null | null | null | splicing_variant | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | splice_region_variant | splice_region_variant | ENSG00000116560 | 7 | ENSG00000116560 | 7 | 7 | ENSG00000116560 | splice_region_variant | ENSG00000116560 | 5,179 | ENSG00000116560 | 76 | 76 | ENSG00000116560 | splicing | urn:mavedb:00001265-a-1#78 | NC_000001.11:g.35187965T>G | NA | NA | 0.005667 | chr1 | 35,187,965 | T | SFPQ_X7 | SFPQ_X7B | 0.009661 | 0.024602 | -0.013268 | --- | p- | p- | functionally_normal | 0.001202 | 0.998798 | PASS | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | Cell proliferation assay | Chemical-based transfection | Nuclease | SpCas9 | Single-dimensional data | Loss of function | Immortalized human cells | Direct sequencing | Single-segment (short read) | Endogenous locus library method | null | normal | normal | Investigator-provided functional classes | null | 1 | 0.005667 | 1:35187965:T>G | sge_00000001 | 35,187,964 | 35,187,837 | 35,188,092 | TCAAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCT | zoonomia-rag-direct-hal-v1 | null | null | null | null | false | false | GL010061.1 | 14,197,946 | 14,198,201 | + | true | true | TolMat_scaffold_339430 | 3,249 | 3,504 | + | true | true | CM000179.6 | 111,552,699 | 111,552,954 | - | true | true | CM000378.2 | 22,062,886 | 22,063,141 | - | true | true | chr4 | 127,026,726 | 127,026,981 | - | true | true | null | null | null | null | false | false | - | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | AGATGGAAGAACAAATGAGACGCCAAAGAGAGGAAAGTTACAGCAGGATGGGCTACATGGATCCAGTAAGTTGTCAAATTTGAGCTGCCTACAGAACTTGTAAGGAGCCCTGGTGGTACATTGGTTAAGCACTCAATTGCTAATTGAAAGGTTGGTGGTTCGAATCCGCCAGCAGAATCCGCTTGTAAAGATTACGGCCTAGGAAACCCTGTGGGGCAGTTCTACTCTGTGATAGGGTCACGGGAGGCAAACAGC | ATTTCCAGGCAAGAGGAAGAACGACGTAGAAGGGAGGAAGAGATGATGATTCGTCAACGTGAGATGGAAGAACAAATGAGACGCCAAAGAGAGGAAAGCTACAGCCGGATGGGCTACATGGATCCAGTAAGTTCACTTTTTTGCAGTCGTTGGAATTTTCTACAGAACTTGTGGGTACCTAGAATGAAGTTTTACCCAGTTAAATGAAAAATGTAATGTCTCACATTATAGCCATTATTTTCTTTATAATAGTTG | TTTCCAGGCAAGAGGAAGAACGACGTAGGAGGGAAGAAGAGATGATGATTCGTCAACGTGAGATGGAAGAACAGATGAGACGCCAAAGAGAGGAAAGTTATAGTCGGATGGGCTATATGGATCCAGTAAGTAAACTTTTGCAATGTAATCGGAGTTTTCTACAGAATTTGTGGATACCTAGGGTGCAGTTTATTCAGTTAAATGTCACTTTTCACATGGTAGCTATTCTACCTTTTTCTTTCTTTCTTTTTAACC | GGATCCAGTAAGTATACTTCTGTTGTGATCTAATTGGAGTTGTCTATAAAACTTGTAGGTACCTAGAACGAAATGTTACTCAGTTAAGTAGAACATTTTGCATTATAGCTAATTTGTGTGTGTGTGTGAGGAAGACTGGCCCTGAGCTAACATGTGTTGCTAATCTTCTTTTTGCTTGAGGAAGATTGTCCCTGAGCTAACATCTGTGCCAATCTTCCTCTATTTTATATGTGGGACACCGCCACAGTACGGCTT | ATGGATGACACTTTGTTTTATATGCCTGAAAAATATTTGTAGGCAAGAGGAGGAACGGCGTAGACGAGAGGAAGAGATGATGATTCGCCAACGTGAGATGGAAGAACAAATGAGACGCCAACGAGAAGAAAGTTACAGCAGGATGGGCTACATGGATCCAGTAAGTTTTTATCCATTGTAAGTGTACACTCACTCAGGCGTGGCTGTTTTGTTTTGTGTGTATAAACTCCTATCAGATCTTGCTGGACCAAATGC | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | AGGCAAGAGGAGGAACGACGTAGAAGAGAGGAAGAGATGATGATTCGTCAACGTGAGATGGAAGAACAAATGAGGCGCCAAAGAGAGGAAAGTTACAGCCGAATGGGCTACATGGATCCAGTAAGTCAGCCTTTACTGCCTTCCAATTGGAGTTGTCTATAGAACTTGCAGGTACCTAGAAGGAATTACAGGAAATTTTAATATCAAATTACAGTTATTTTCTGCTTTTTTTCTAACAAAGTATATTATGTTTGA | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN[SEQ]AGATGGAAGAACAAATGAGACGCCAAAGAGAGGAAAGTTACAGCAGGATGGGCTACATGG... | AGCCTTTACTGCCTTCCAATTGGAGTTGTCTATAGAACTTGCAGGTACCTAGAAGGAATTACAGGAAATTTTAATATCAAATTACAGTTATTTTCTGCTTTTTTTCTAACAAAGTATATTATGTTTGA | CGCCTTTACTGCCTTCCAATTGGAGTTGTCTATAGAACTTGCAGGTACCTAGAAGGAATTACAGGAAATTTTAATATCAAATTACAGTTATTTTCTGCTTTTTTTCTAACAAAGTATATTATGTTTGA | false | true | true | 1 | 35,187,837 | 35,188,092 | - | zoonomia-rag-v1 | sge|1:35187965:T>G|- |
1 | 35,187,966 | G | A | false | splicing | SFPQ | sge | urn:mavedb:00001265-a-1 | 0.01518 | null | null | null | null | A | null | null | null | null | null | null | null | null | null | splicing_variant | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | splice_region_variant | splice_region_variant | ENSG00000116560 | 6 | ENSG00000116560 | 6 | 6 | ENSG00000116560 | splice_region_variant | ENSG00000116560 | 5,178 | ENSG00000116560 | 75 | 75 | ENSG00000116560 | splicing | urn:mavedb:00001265-a-1#79 | NC_000001.11:g.35187966G>A | NA | NA | 0.01518 | chr1 | 35,187,966 | G | SFPQ_X7 | SFPQ_X7B | 0.007415 | 0.029713 | 0.000647 | --- | p- | p- | functionally_normal | 0.000821 | 0.999179 | PASS | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | Cell proliferation assay | Chemical-based transfection | Nuclease | SpCas9 | Single-dimensional data | Loss of function | Immortalized human cells | Direct sequencing | Single-segment (short read) | Endogenous locus library method | null | normal | normal | Investigator-provided functional classes | null | 1 | 0.01518 | 1:35187966:G>A | sge_00000002 | 35,187,965 | 35,187,838 | 35,188,093 | CAAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTA | zoonomia-rag-direct-hal-v1 | null | null | null | null | false | false | GL010061.1 | 14,197,946 | 14,198,201 | + | true | true | TolMat_scaffold_339430 | 3,249 | 3,504 | + | true | true | CM000179.6 | 111,552,699 | 111,552,954 | - | true | true | CM000378.2 | 22,062,885 | 22,063,140 | - | true | true | chr4 | 127,026,726 | 127,026,981 | - | true | true | null | null | null | null | false | false | + | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | GCTGTTTGCCTCCCGTGACCCTATCACAGAGTAGAACTGCCCCACAGGGTTTCCTAGGCCGTAATCTTTACAAGCGGATTCTGCTGGCGGATTCGAACCACCAACCTTTCAATTAGCAATTGAGTGCTTAACCAATGTACCACCAGGGCTCCTTACAAGTTCTGTAGGCAGCTCAAATTTGACAACTTACTGGATCCATGTAGCCCATCCTGCTGTAACTTTCCTCTCTTTGGCGTCTCATTTGTTCTTCCATCT | CAACTATTATAAAGAAAATAATGGCTATAATGTGAGACATTACATTTTTCATTTAACTGGGTAAAACTTCATTCTAGGTACCCACAAGTTCTGTAGAAAATTCCAACGACTGCAAAAAAGTGAACTTACTGGATCCATGTAGCCCATCCGGCTGTAGCTTTCCTCTCTTTGGCGTCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCCCTTCTACGTCGTTCTTCCTCTTGCCTGGAAAT | GGTTAAAAAGAAAGAAAGAAAAAGGTAGAATAGCTACCATGTGAAAAGTGACATTTAACTGAATAAACTGCACCCTAGGTATCCACAAATTCTGTAGAAAACTCCGATTACATTGCAAAAGTTTACTTACTGGATCCATATAGCCCATCCGACTATAACTTTCCTCTCTTTGGCGTCTCATCTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCTTCCCTCCTACGTCGTTCTTCCTCTTGCCTGGAAA | AGCCGTACTGTGGCGGTGTCCCACATATAAAATAGAGGAAGATTGGCACAGATGTTAGCTCAGGGACAATCTTCCTCAAGCAAAAAGAAGATTAGCAACACATGTTAGCTCAGGGCCAGTCTTCCTCACACACACACACAAATTAGCTATAATGCAAAATGTTCTACTTAACTGAGTAACATTTCGTTCTAGGTACCTACAAGTTTTATAGACAACTCCAATTAGATCACAACAGAAGTATACTTACTGGATCCA | GCATTTGGTCCAGCAAGATCTGATAGGAGTTTATACACACAAAACAAAACAGCCACGCCTGAGTGAGTGTACACTTACAATGGATAAAAACTTACTGGATCCATGTAGCCCATCCTGCTGTAACTTTCTTCTCGTTGGCGTCTCATTTGTTCTTCCATCTCACGTTGGCGAATCATCATCTCTTCCTCTCGTCTACGCCGTTCCTCCTCTTGCCTACAAATATTTTTCAGGCATATAAAACAAAGTGTCATCCAT | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | CAAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTA | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN[SEQ]GCTGTTTGCCTCCCGTGACCCTATCACAGAGTAGAACTGCCCCACAGGGTTTCCTAGGCC... | GACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTA | AACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTA | false | true | true | 1 | 35,187,838 | 35,188,093 | + | zoonomia-rag-v1 | sge|1:35187966:G>A|+ |
1 | 35,187,966 | G | A | false | splicing | SFPQ | sge | urn:mavedb:00001265-a-1 | 0.01518 | null | null | null | null | A | null | null | null | null | null | null | null | null | null | splicing_variant | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | splice_region_variant | splice_region_variant | ENSG00000116560 | 6 | ENSG00000116560 | 6 | 6 | ENSG00000116560 | splice_region_variant | ENSG00000116560 | 5,178 | ENSG00000116560 | 75 | 75 | ENSG00000116560 | splicing | urn:mavedb:00001265-a-1#79 | NC_000001.11:g.35187966G>A | NA | NA | 0.01518 | chr1 | 35,187,966 | G | SFPQ_X7 | SFPQ_X7B | 0.007415 | 0.029713 | 0.000647 | --- | p- | p- | functionally_normal | 0.000821 | 0.999179 | PASS | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | Cell proliferation assay | Chemical-based transfection | Nuclease | SpCas9 | Single-dimensional data | Loss of function | Immortalized human cells | Direct sequencing | Single-segment (short read) | Endogenous locus library method | null | normal | normal | Investigator-provided functional classes | null | 1 | 0.01518 | 1:35187966:G>A | sge_00000002 | 35,187,965 | 35,187,838 | 35,188,093 | CAAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTA | zoonomia-rag-direct-hal-v1 | null | null | null | null | false | false | GL010061.1 | 14,197,946 | 14,198,201 | + | true | true | TolMat_scaffold_339430 | 3,249 | 3,504 | + | true | true | CM000179.6 | 111,552,699 | 111,552,954 | - | true | true | CM000378.2 | 22,062,885 | 22,063,140 | - | true | true | chr4 | 127,026,726 | 127,026,981 | - | true | true | null | null | null | null | false | false | - | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | AGATGGAAGAACAAATGAGACGCCAAAGAGAGGAAAGTTACAGCAGGATGGGCTACATGGATCCAGTAAGTTGTCAAATTTGAGCTGCCTACAGAACTTGTAAGGAGCCCTGGTGGTACATTGGTTAAGCACTCAATTGCTAATTGAAAGGTTGGTGGTTCGAATCCGCCAGCAGAATCCGCTTGTAAAGATTACGGCCTAGGAAACCCTGTGGGGCAGTTCTACTCTGTGATAGGGTCACGGGAGGCAAACAGC | ATTTCCAGGCAAGAGGAAGAACGACGTAGAAGGGAGGAAGAGATGATGATTCGTCAACGTGAGATGGAAGAACAAATGAGACGCCAAAGAGAGGAAAGCTACAGCCGGATGGGCTACATGGATCCAGTAAGTTCACTTTTTTGCAGTCGTTGGAATTTTCTACAGAACTTGTGGGTACCTAGAATGAAGTTTTACCCAGTTAAATGAAAAATGTAATGTCTCACATTATAGCCATTATTTTCTTTATAATAGTTG | TTTCCAGGCAAGAGGAAGAACGACGTAGGAGGGAAGAAGAGATGATGATTCGTCAACGTGAGATGGAAGAACAGATGAGACGCCAAAGAGAGGAAAGTTATAGTCGGATGGGCTATATGGATCCAGTAAGTAAACTTTTGCAATGTAATCGGAGTTTTCTACAGAATTTGTGGATACCTAGGGTGCAGTTTATTCAGTTAAATGTCACTTTTCACATGGTAGCTATTCTACCTTTTTCTTTCTTTCTTTTTAACC | TGGATCCAGTAAGTATACTTCTGTTGTGATCTAATTGGAGTTGTCTATAAAACTTGTAGGTACCTAGAACGAAATGTTACTCAGTTAAGTAGAACATTTTGCATTATAGCTAATTTGTGTGTGTGTGTGAGGAAGACTGGCCCTGAGCTAACATGTGTTGCTAATCTTCTTTTTGCTTGAGGAAGATTGTCCCTGAGCTAACATCTGTGCCAATCTTCCTCTATTTTATATGTGGGACACCGCCACAGTACGGCT | ATGGATGACACTTTGTTTTATATGCCTGAAAAATATTTGTAGGCAAGAGGAGGAACGGCGTAGACGAGAGGAAGAGATGATGATTCGCCAACGTGAGATGGAAGAACAAATGAGACGCCAACGAGAAGAAAGTTACAGCAGGATGGGCTACATGGATCCAGTAAGTTTTTATCCATTGTAAGTGTACACTCACTCAGGCGTGGCTGTTTTGTTTTGTGTGTATAAACTCCTATCAGATCTTGCTGGACCAAATGC | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | TAGGCAAGAGGAGGAACGACGTAGAAGAGAGGAAGAGATGATGATTCGTCAACGTGAGATGGAAGAACAAATGAGGCGCCAAAGAGAGGAAAGTTACAGCCGAATGGGCTACATGGATCCAGTAAGTCAGCCTTTACTGCCTTCCAATTGGAGTTGTCTATAGAACTTGCAGGTACCTAGAAGGAATTACAGGAAATTTTAATATCAAATTACAGTTATTTTCTGCTTTTTTTCTAACAAAGTATATTATGTTTG | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN[SEQ]AGATGGAAGAACAAATGAGACGCCAAAGAGAGGAAAGTTACAGCAGGATGGGCTACATGG... | CAGCCTTTACTGCCTTCCAATTGGAGTTGTCTATAGAACTTGCAGGTACCTAGAAGGAATTACAGGAAATTTTAATATCAAATTACAGTTATTTTCTGCTTTTTTTCTAACAAAGTATATTATGTTTG | TAGCCTTTACTGCCTTCCAATTGGAGTTGTCTATAGAACTTGCAGGTACCTAGAAGGAATTACAGGAAATTTTAATATCAAATTACAGTTATTTTCTGCTTTTTTTCTAACAAAGTATATTATGTTTG | false | true | true | 1 | 35,187,838 | 35,188,093 | - | zoonomia-rag-v1 | sge|1:35187966:G>A|- |
1 | 35,187,966 | G | C | false | splicing | SFPQ | sge | urn:mavedb:00001265-a-1 | 0.015469 | null | null | null | null | C | null | null | null | null | null | null | null | null | null | splicing_variant | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | splice_region_variant | splice_region_variant | ENSG00000116560 | 6 | ENSG00000116560 | 6 | 6 | ENSG00000116560 | splice_region_variant | ENSG00000116560 | 5,178 | ENSG00000116560 | 75 | 75 | ENSG00000116560 | splicing | urn:mavedb:00001265-a-1#80 | NC_000001.11:g.35187966G>C | NA | NA | 0.015469 | chr1 | 35,187,966 | G | SFPQ_X7 | SFPQ_X7B | 0.006874 | 0.028942 | 0.001997 | --- | p- | p- | functionally_normal | 0.00082 | 0.99918 | PASS | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | Cell proliferation assay | Chemical-based transfection | Nuclease | SpCas9 | Single-dimensional data | Loss of function | Immortalized human cells | Direct sequencing | Single-segment (short read) | Endogenous locus library method | null | normal | normal | Investigator-provided functional classes | null | 1 | 0.015469 | 1:35187966:G>C | sge_00000003 | 35,187,965 | 35,187,838 | 35,188,093 | CAAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTA | zoonomia-rag-direct-hal-v1 | null | null | null | null | false | false | GL010061.1 | 14,197,946 | 14,198,201 | + | true | true | TolMat_scaffold_339430 | 3,249 | 3,504 | + | true | true | CM000179.6 | 111,552,699 | 111,552,954 | - | true | true | CM000378.2 | 22,062,885 | 22,063,140 | - | true | true | chr4 | 127,026,726 | 127,026,981 | - | true | true | null | null | null | null | false | false | + | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | GCTGTTTGCCTCCCGTGACCCTATCACAGAGTAGAACTGCCCCACAGGGTTTCCTAGGCCGTAATCTTTACAAGCGGATTCTGCTGGCGGATTCGAACCACCAACCTTTCAATTAGCAATTGAGTGCTTAACCAATGTACCACCAGGGCTCCTTACAAGTTCTGTAGGCAGCTCAAATTTGACAACTTACTGGATCCATGTAGCCCATCCTGCTGTAACTTTCCTCTCTTTGGCGTCTCATTTGTTCTTCCATCT | CAACTATTATAAAGAAAATAATGGCTATAATGTGAGACATTACATTTTTCATTTAACTGGGTAAAACTTCATTCTAGGTACCCACAAGTTCTGTAGAAAATTCCAACGACTGCAAAAAAGTGAACTTACTGGATCCATGTAGCCCATCCGGCTGTAGCTTTCCTCTCTTTGGCGTCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCCCTTCTACGTCGTTCTTCCTCTTGCCTGGAAAT | GGTTAAAAAGAAAGAAAGAAAAAGGTAGAATAGCTACCATGTGAAAAGTGACATTTAACTGAATAAACTGCACCCTAGGTATCCACAAATTCTGTAGAAAACTCCGATTACATTGCAAAAGTTTACTTACTGGATCCATATAGCCCATCCGACTATAACTTTCCTCTCTTTGGCGTCTCATCTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCTTCCCTCCTACGTCGTTCTTCCTCTTGCCTGGAAA | AGCCGTACTGTGGCGGTGTCCCACATATAAAATAGAGGAAGATTGGCACAGATGTTAGCTCAGGGACAATCTTCCTCAAGCAAAAAGAAGATTAGCAACACATGTTAGCTCAGGGCCAGTCTTCCTCACACACACACACAAATTAGCTATAATGCAAAATGTTCTACTTAACTGAGTAACATTTCGTTCTAGGTACCTACAAGTTTTATAGACAACTCCAATTAGATCACAACAGAAGTATACTTACTGGATCCA | GCATTTGGTCCAGCAAGATCTGATAGGAGTTTATACACACAAAACAAAACAGCCACGCCTGAGTGAGTGTACACTTACAATGGATAAAAACTTACTGGATCCATGTAGCCCATCCTGCTGTAACTTTCTTCTCGTTGGCGTCTCATTTGTTCTTCCATCTCACGTTGGCGAATCATCATCTCTTCCTCTCGTCTACGCCGTTCCTCCTCTTGCCTACAAATATTTTTCAGGCATATAAAACAAAGTGTCATCCAT | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | CAAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTA | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN[SEQ]GCTGTTTGCCTCCCGTGACCCTATCACAGAGTAGAACTGCCCCACAGGGTTTCCTAGGCC... | GACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTA | CACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTA | false | true | true | 1 | 35,187,838 | 35,188,093 | + | zoonomia-rag-v1 | sge|1:35187966:G>C|+ |
1 | 35,187,966 | G | C | false | splicing | SFPQ | sge | urn:mavedb:00001265-a-1 | 0.015469 | null | null | null | null | C | null | null | null | null | null | null | null | null | null | splicing_variant | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | splice_region_variant | splice_region_variant | ENSG00000116560 | 6 | ENSG00000116560 | 6 | 6 | ENSG00000116560 | splice_region_variant | ENSG00000116560 | 5,178 | ENSG00000116560 | 75 | 75 | ENSG00000116560 | splicing | urn:mavedb:00001265-a-1#80 | NC_000001.11:g.35187966G>C | NA | NA | 0.015469 | chr1 | 35,187,966 | G | SFPQ_X7 | SFPQ_X7B | 0.006874 | 0.028942 | 0.001997 | --- | p- | p- | functionally_normal | 0.00082 | 0.99918 | PASS | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | Cell proliferation assay | Chemical-based transfection | Nuclease | SpCas9 | Single-dimensional data | Loss of function | Immortalized human cells | Direct sequencing | Single-segment (short read) | Endogenous locus library method | null | normal | normal | Investigator-provided functional classes | null | 1 | 0.015469 | 1:35187966:G>C | sge_00000003 | 35,187,965 | 35,187,838 | 35,188,093 | CAAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTA | zoonomia-rag-direct-hal-v1 | null | null | null | null | false | false | GL010061.1 | 14,197,946 | 14,198,201 | + | true | true | TolMat_scaffold_339430 | 3,249 | 3,504 | + | true | true | CM000179.6 | 111,552,699 | 111,552,954 | - | true | true | CM000378.2 | 22,062,885 | 22,063,140 | - | true | true | chr4 | 127,026,726 | 127,026,981 | - | true | true | null | null | null | null | false | false | - | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | AGATGGAAGAACAAATGAGACGCCAAAGAGAGGAAAGTTACAGCAGGATGGGCTACATGGATCCAGTAAGTTGTCAAATTTGAGCTGCCTACAGAACTTGTAAGGAGCCCTGGTGGTACATTGGTTAAGCACTCAATTGCTAATTGAAAGGTTGGTGGTTCGAATCCGCCAGCAGAATCCGCTTGTAAAGATTACGGCCTAGGAAACCCTGTGGGGCAGTTCTACTCTGTGATAGGGTCACGGGAGGCAAACAGC | ATTTCCAGGCAAGAGGAAGAACGACGTAGAAGGGAGGAAGAGATGATGATTCGTCAACGTGAGATGGAAGAACAAATGAGACGCCAAAGAGAGGAAAGCTACAGCCGGATGGGCTACATGGATCCAGTAAGTTCACTTTTTTGCAGTCGTTGGAATTTTCTACAGAACTTGTGGGTACCTAGAATGAAGTTTTACCCAGTTAAATGAAAAATGTAATGTCTCACATTATAGCCATTATTTTCTTTATAATAGTTG | TTTCCAGGCAAGAGGAAGAACGACGTAGGAGGGAAGAAGAGATGATGATTCGTCAACGTGAGATGGAAGAACAGATGAGACGCCAAAGAGAGGAAAGTTATAGTCGGATGGGCTATATGGATCCAGTAAGTAAACTTTTGCAATGTAATCGGAGTTTTCTACAGAATTTGTGGATACCTAGGGTGCAGTTTATTCAGTTAAATGTCACTTTTCACATGGTAGCTATTCTACCTTTTTCTTTCTTTCTTTTTAACC | TGGATCCAGTAAGTATACTTCTGTTGTGATCTAATTGGAGTTGTCTATAAAACTTGTAGGTACCTAGAACGAAATGTTACTCAGTTAAGTAGAACATTTTGCATTATAGCTAATTTGTGTGTGTGTGTGAGGAAGACTGGCCCTGAGCTAACATGTGTTGCTAATCTTCTTTTTGCTTGAGGAAGATTGTCCCTGAGCTAACATCTGTGCCAATCTTCCTCTATTTTATATGTGGGACACCGCCACAGTACGGCT | ATGGATGACACTTTGTTTTATATGCCTGAAAAATATTTGTAGGCAAGAGGAGGAACGGCGTAGACGAGAGGAAGAGATGATGATTCGCCAACGTGAGATGGAAGAACAAATGAGACGCCAACGAGAAGAAAGTTACAGCAGGATGGGCTACATGGATCCAGTAAGTTTTTATCCATTGTAAGTGTACACTCACTCAGGCGTGGCTGTTTTGTTTTGTGTGTATAAACTCCTATCAGATCTTGCTGGACCAAATGC | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | TAGGCAAGAGGAGGAACGACGTAGAAGAGAGGAAGAGATGATGATTCGTCAACGTGAGATGGAAGAACAAATGAGGCGCCAAAGAGAGGAAAGTTACAGCCGAATGGGCTACATGGATCCAGTAAGTCAGCCTTTACTGCCTTCCAATTGGAGTTGTCTATAGAACTTGCAGGTACCTAGAAGGAATTACAGGAAATTTTAATATCAAATTACAGTTATTTTCTGCTTTTTTTCTAACAAAGTATATTATGTTTG | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN[SEQ]AGATGGAAGAACAAATGAGACGCCAAAGAGAGGAAAGTTACAGCAGGATGGGCTACATGG... | CAGCCTTTACTGCCTTCCAATTGGAGTTGTCTATAGAACTTGCAGGTACCTAGAAGGAATTACAGGAAATTTTAATATCAAATTACAGTTATTTTCTGCTTTTTTTCTAACAAAGTATATTATGTTTG | GAGCCTTTACTGCCTTCCAATTGGAGTTGTCTATAGAACTTGCAGGTACCTAGAAGGAATTACAGGAAATTTTAATATCAAATTACAGTTATTTTCTGCTTTTTTTCTAACAAAGTATATTATGTTTG | false | true | true | 1 | 35,187,838 | 35,188,093 | - | zoonomia-rag-v1 | sge|1:35187966:G>C|- |
1 | 35,187,966 | G | T | false | splicing | SFPQ | sge | urn:mavedb:00001265-a-1 | 0.009015 | null | null | null | null | T | null | null | null | null | null | null | null | null | null | splicing_variant | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | splice_region_variant | splice_region_variant | ENSG00000116560 | 6 | ENSG00000116560 | 6 | 6 | ENSG00000116560 | splice_region_variant | ENSG00000116560 | 5,178 | ENSG00000116560 | 75 | 75 | ENSG00000116560 | splicing | urn:mavedb:00001265-a-1#81 | NC_000001.11:g.35187966G>T | NA | NA | 0.009015 | chr1 | 35,187,966 | G | SFPQ_X7 | SFPQ_X7B | 0.014983 | 0.038381 | -0.020351 | --- | p- | p- | functionally_normal | 0.00098 | 0.99902 | PASS | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | Cell proliferation assay | Chemical-based transfection | Nuclease | SpCas9 | Single-dimensional data | Loss of function | Immortalized human cells | Direct sequencing | Single-segment (short read) | Endogenous locus library method | null | normal | normal | Investigator-provided functional classes | null | 1 | 0.009015 | 1:35187966:G>T | sge_00000004 | 35,187,965 | 35,187,838 | 35,188,093 | CAAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTA | zoonomia-rag-direct-hal-v1 | null | null | null | null | false | false | GL010061.1 | 14,197,946 | 14,198,201 | + | true | true | TolMat_scaffold_339430 | 3,249 | 3,504 | + | true | true | CM000179.6 | 111,552,699 | 111,552,954 | - | true | true | CM000378.2 | 22,062,885 | 22,063,140 | - | true | true | chr4 | 127,026,726 | 127,026,981 | - | true | true | null | null | null | null | false | false | + | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | GCTGTTTGCCTCCCGTGACCCTATCACAGAGTAGAACTGCCCCACAGGGTTTCCTAGGCCGTAATCTTTACAAGCGGATTCTGCTGGCGGATTCGAACCACCAACCTTTCAATTAGCAATTGAGTGCTTAACCAATGTACCACCAGGGCTCCTTACAAGTTCTGTAGGCAGCTCAAATTTGACAACTTACTGGATCCATGTAGCCCATCCTGCTGTAACTTTCCTCTCTTTGGCGTCTCATTTGTTCTTCCATCT | CAACTATTATAAAGAAAATAATGGCTATAATGTGAGACATTACATTTTTCATTTAACTGGGTAAAACTTCATTCTAGGTACCCACAAGTTCTGTAGAAAATTCCAACGACTGCAAAAAAGTGAACTTACTGGATCCATGTAGCCCATCCGGCTGTAGCTTTCCTCTCTTTGGCGTCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCCCTTCTACGTCGTTCTTCCTCTTGCCTGGAAAT | GGTTAAAAAGAAAGAAAGAAAAAGGTAGAATAGCTACCATGTGAAAAGTGACATTTAACTGAATAAACTGCACCCTAGGTATCCACAAATTCTGTAGAAAACTCCGATTACATTGCAAAAGTTTACTTACTGGATCCATATAGCCCATCCGACTATAACTTTCCTCTCTTTGGCGTCTCATCTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCTTCCCTCCTACGTCGTTCTTCCTCTTGCCTGGAAA | AGCCGTACTGTGGCGGTGTCCCACATATAAAATAGAGGAAGATTGGCACAGATGTTAGCTCAGGGACAATCTTCCTCAAGCAAAAAGAAGATTAGCAACACATGTTAGCTCAGGGCCAGTCTTCCTCACACACACACACAAATTAGCTATAATGCAAAATGTTCTACTTAACTGAGTAACATTTCGTTCTAGGTACCTACAAGTTTTATAGACAACTCCAATTAGATCACAACAGAAGTATACTTACTGGATCCA | GCATTTGGTCCAGCAAGATCTGATAGGAGTTTATACACACAAAACAAAACAGCCACGCCTGAGTGAGTGTACACTTACAATGGATAAAAACTTACTGGATCCATGTAGCCCATCCTGCTGTAACTTTCTTCTCGTTGGCGTCTCATTTGTTCTTCCATCTCACGTTGGCGAATCATCATCTCTTCCTCTCGTCTACGCCGTTCCTCCTCTTGCCTACAAATATTTTTCAGGCATATAAAACAAAGTGTCATCCAT | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | CAAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTA | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN[SEQ]GCTGTTTGCCTCCCGTGACCCTATCACAGAGTAGAACTGCCCCACAGGGTTTCCTAGGCC... | GACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTA | TACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTA | false | true | true | 1 | 35,187,838 | 35,188,093 | + | zoonomia-rag-v1 | sge|1:35187966:G>T|+ |
1 | 35,187,966 | G | T | false | splicing | SFPQ | sge | urn:mavedb:00001265-a-1 | 0.009015 | null | null | null | null | T | null | null | null | null | null | null | null | null | null | splicing_variant | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | splice_region_variant | splice_region_variant | ENSG00000116560 | 6 | ENSG00000116560 | 6 | 6 | ENSG00000116560 | splice_region_variant | ENSG00000116560 | 5,178 | ENSG00000116560 | 75 | 75 | ENSG00000116560 | splicing | urn:mavedb:00001265-a-1#81 | NC_000001.11:g.35187966G>T | NA | NA | 0.009015 | chr1 | 35,187,966 | G | SFPQ_X7 | SFPQ_X7B | 0.014983 | 0.038381 | -0.020351 | --- | p- | p- | functionally_normal | 0.00098 | 0.99902 | PASS | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | Cell proliferation assay | Chemical-based transfection | Nuclease | SpCas9 | Single-dimensional data | Loss of function | Immortalized human cells | Direct sequencing | Single-segment (short read) | Endogenous locus library method | null | normal | normal | Investigator-provided functional classes | null | 1 | 0.009015 | 1:35187966:G>T | sge_00000004 | 35,187,965 | 35,187,838 | 35,188,093 | CAAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTA | zoonomia-rag-direct-hal-v1 | null | null | null | null | false | false | GL010061.1 | 14,197,946 | 14,198,201 | + | true | true | TolMat_scaffold_339430 | 3,249 | 3,504 | + | true | true | CM000179.6 | 111,552,699 | 111,552,954 | - | true | true | CM000378.2 | 22,062,885 | 22,063,140 | - | true | true | chr4 | 127,026,726 | 127,026,981 | - | true | true | null | null | null | null | false | false | - | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | AGATGGAAGAACAAATGAGACGCCAAAGAGAGGAAAGTTACAGCAGGATGGGCTACATGGATCCAGTAAGTTGTCAAATTTGAGCTGCCTACAGAACTTGTAAGGAGCCCTGGTGGTACATTGGTTAAGCACTCAATTGCTAATTGAAAGGTTGGTGGTTCGAATCCGCCAGCAGAATCCGCTTGTAAAGATTACGGCCTAGGAAACCCTGTGGGGCAGTTCTACTCTGTGATAGGGTCACGGGAGGCAAACAGC | ATTTCCAGGCAAGAGGAAGAACGACGTAGAAGGGAGGAAGAGATGATGATTCGTCAACGTGAGATGGAAGAACAAATGAGACGCCAAAGAGAGGAAAGCTACAGCCGGATGGGCTACATGGATCCAGTAAGTTCACTTTTTTGCAGTCGTTGGAATTTTCTACAGAACTTGTGGGTACCTAGAATGAAGTTTTACCCAGTTAAATGAAAAATGTAATGTCTCACATTATAGCCATTATTTTCTTTATAATAGTTG | TTTCCAGGCAAGAGGAAGAACGACGTAGGAGGGAAGAAGAGATGATGATTCGTCAACGTGAGATGGAAGAACAGATGAGACGCCAAAGAGAGGAAAGTTATAGTCGGATGGGCTATATGGATCCAGTAAGTAAACTTTTGCAATGTAATCGGAGTTTTCTACAGAATTTGTGGATACCTAGGGTGCAGTTTATTCAGTTAAATGTCACTTTTCACATGGTAGCTATTCTACCTTTTTCTTTCTTTCTTTTTAACC | TGGATCCAGTAAGTATACTTCTGTTGTGATCTAATTGGAGTTGTCTATAAAACTTGTAGGTACCTAGAACGAAATGTTACTCAGTTAAGTAGAACATTTTGCATTATAGCTAATTTGTGTGTGTGTGTGAGGAAGACTGGCCCTGAGCTAACATGTGTTGCTAATCTTCTTTTTGCTTGAGGAAGATTGTCCCTGAGCTAACATCTGTGCCAATCTTCCTCTATTTTATATGTGGGACACCGCCACAGTACGGCT | ATGGATGACACTTTGTTTTATATGCCTGAAAAATATTTGTAGGCAAGAGGAGGAACGGCGTAGACGAGAGGAAGAGATGATGATTCGCCAACGTGAGATGGAAGAACAAATGAGACGCCAACGAGAAGAAAGTTACAGCAGGATGGGCTACATGGATCCAGTAAGTTTTTATCCATTGTAAGTGTACACTCACTCAGGCGTGGCTGTTTTGTTTTGTGTGTATAAACTCCTATCAGATCTTGCTGGACCAAATGC | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | TAGGCAAGAGGAGGAACGACGTAGAAGAGAGGAAGAGATGATGATTCGTCAACGTGAGATGGAAGAACAAATGAGGCGCCAAAGAGAGGAAAGTTACAGCCGAATGGGCTACATGGATCCAGTAAGTCAGCCTTTACTGCCTTCCAATTGGAGTTGTCTATAGAACTTGCAGGTACCTAGAAGGAATTACAGGAAATTTTAATATCAAATTACAGTTATTTTCTGCTTTTTTTCTAACAAAGTATATTATGTTTG | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN[SEQ]AGATGGAAGAACAAATGAGACGCCAAAGAGAGGAAAGTTACAGCAGGATGGGCTACATGG... | CAGCCTTTACTGCCTTCCAATTGGAGTTGTCTATAGAACTTGCAGGTACCTAGAAGGAATTACAGGAAATTTTAATATCAAATTACAGTTATTTTCTGCTTTTTTTCTAACAAAGTATATTATGTTTG | AAGCCTTTACTGCCTTCCAATTGGAGTTGTCTATAGAACTTGCAGGTACCTAGAAGGAATTACAGGAAATTTTAATATCAAATTACAGTTATTTTCTGCTTTTTTTCTAACAAAGTATATTATGTTTG | false | true | true | 1 | 35,187,838 | 35,188,093 | - | zoonomia-rag-v1 | sge|1:35187966:G>T|- |
1 | 35,187,967 | A | C | true | splicing | SFPQ | sge | urn:mavedb:00001265-a-1 | -0.166176 | null | null | null | null | C | null | null | null | null | null | null | null | null | null | splicing_variant | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | splice_donor_region_variant | splice_donor_region_variant | ENSG00000116560 | 5 | ENSG00000116560 | 5 | 5 | ENSG00000116560 | splice_donor_region_variant | ENSG00000116560 | 5,177 | ENSG00000116560 | 74 | 74 | ENSG00000116560 | splicing | urn:mavedb:00001265-a-1#82 | NC_000001.11:g.35187967A>C | NA | NA | -0.166176 | chr1 | 35,187,967 | A | SFPQ_X7 | SFPQ_X7B | 0.066515 | -0.035806 | -0.296546 | --- | p- | p- | functionally_abnormal | 1 | 0 | PASS | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | Cell proliferation assay | Chemical-based transfection | Nuclease | SpCas9 | Single-dimensional data | Loss of function | Immortalized human cells | Direct sequencing | Single-segment (short read) | Endogenous locus library method | null | abnormal | abnormal | Investigator-provided functional classes | null | 1 | -0.166176 | 1:35187967:A>C | sge_00000005 | 35,187,966 | 35,187,839 | 35,188,094 | AAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTAG | zoonomia-rag-direct-hal-v1 | null | null | null | null | false | false | GL010061.1 | 14,197,947 | 14,198,202 | + | true | true | TolMat_scaffold_339430 | 3,250 | 3,505 | + | true | true | CM000179.6 | 111,552,698 | 111,552,953 | - | true | true | CM000378.2 | 22,062,885 | 22,063,140 | - | true | true | chr4 | 127,026,725 | 127,026,980 | - | true | true | null | null | null | null | false | false | + | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | CTGTTTGCCTCCCGTGACCCTATCACAGAGTAGAACTGCCCCACAGGGTTTCCTAGGCCGTAATCTTTACAAGCGGATTCTGCTGGCGGATTCGAACCACCAACCTTTCAATTAGCAATTGAGTGCTTAACCAATGTACCACCAGGGCTCCTTACAAGTTCTGTAGGCAGCTCAAATTTGACAACTTACTGGATCCATGTAGCCCATCCTGCTGTAACTTTCCTCTCTTTGGCGTCTCATTTGTTCTTCCATCTC | AACTATTATAAAGAAAATAATGGCTATAATGTGAGACATTACATTTTTCATTTAACTGGGTAAAACTTCATTCTAGGTACCCACAAGTTCTGTAGAAAATTCCAACGACTGCAAAAAAGTGAACTTACTGGATCCATGTAGCCCATCCGGCTGTAGCTTTCCTCTCTTTGGCGTCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCCCTTCTACGTCGTTCTTCCTCTTGCCTGGAAATA | GTTAAAAAGAAAGAAAGAAAAAGGTAGAATAGCTACCATGTGAAAAGTGACATTTAACTGAATAAACTGCACCCTAGGTATCCACAAATTCTGTAGAAAACTCCGATTACATTGCAAAAGTTTACTTACTGGATCCATATAGCCCATCCGACTATAACTTTCCTCTCTTTGGCGTCTCATCTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCTTCCCTCCTACGTCGTTCTTCCTCTTGCCTGGAAAT | AGCCGTACTGTGGCGGTGTCCCACATATAAAATAGAGGAAGATTGGCACAGATGTTAGCTCAGGGACAATCTTCCTCAAGCAAAAAGAAGATTAGCAACACATGTTAGCTCAGGGCCAGTCTTCCTCACACACACACACAAATTAGCTATAATGCAAAATGTTCTACTTAACTGAGTAACATTTCGTTCTAGGTACCTACAAGTTTTATAGACAACTCCAATTAGATCACAACAGAAGTATACTTACTGGATCCA | CATTTGGTCCAGCAAGATCTGATAGGAGTTTATACACACAAAACAAAACAGCCACGCCTGAGTGAGTGTACACTTACAATGGATAAAAACTTACTGGATCCATGTAGCCCATCCTGCTGTAACTTTCTTCTCGTTGGCGTCTCATTTGTTCTTCCATCTCACGTTGGCGAATCATCATCTCTTCCTCTCGTCTACGCCGTTCCTCCTCTTGCCTACAAATATTTTTCAGGCATATAAAACAAAGTGTCATCCATG | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | AAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTAG | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN[SEQ]CTGTTTGCCTCCCGTGACCCTATCACAGAGTAGAACTGCCCCACAGGGTTTCCTAGGCCG... | ACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTAG | CCTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTAG | true | true | true | 1 | 35,187,839 | 35,188,094 | + | zoonomia-rag-v1 | sge|1:35187967:A>C|+ |
1 | 35,187,967 | A | C | true | splicing | SFPQ | sge | urn:mavedb:00001265-a-1 | -0.166176 | null | null | null | null | C | null | null | null | null | null | null | null | null | null | splicing_variant | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | splice_donor_region_variant | splice_donor_region_variant | ENSG00000116560 | 5 | ENSG00000116560 | 5 | 5 | ENSG00000116560 | splice_donor_region_variant | ENSG00000116560 | 5,177 | ENSG00000116560 | 74 | 74 | ENSG00000116560 | splicing | urn:mavedb:00001265-a-1#82 | NC_000001.11:g.35187967A>C | NA | NA | -0.166176 | chr1 | 35,187,967 | A | SFPQ_X7 | SFPQ_X7B | 0.066515 | -0.035806 | -0.296546 | --- | p- | p- | functionally_abnormal | 1 | 0 | PASS | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | Cell proliferation assay | Chemical-based transfection | Nuclease | SpCas9 | Single-dimensional data | Loss of function | Immortalized human cells | Direct sequencing | Single-segment (short read) | Endogenous locus library method | null | abnormal | abnormal | Investigator-provided functional classes | null | 1 | -0.166176 | 1:35187967:A>C | sge_00000005 | 35,187,966 | 35,187,839 | 35,188,094 | AAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTAG | zoonomia-rag-direct-hal-v1 | null | null | null | null | false | false | GL010061.1 | 14,197,947 | 14,198,202 | + | true | true | TolMat_scaffold_339430 | 3,250 | 3,505 | + | true | true | CM000179.6 | 111,552,698 | 111,552,953 | - | true | true | CM000378.2 | 22,062,885 | 22,063,140 | - | true | true | chr4 | 127,026,725 | 127,026,980 | - | true | true | null | null | null | null | false | false | - | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | GAGATGGAAGAACAAATGAGACGCCAAAGAGAGGAAAGTTACAGCAGGATGGGCTACATGGATCCAGTAAGTTGTCAAATTTGAGCTGCCTACAGAACTTGTAAGGAGCCCTGGTGGTACATTGGTTAAGCACTCAATTGCTAATTGAAAGGTTGGTGGTTCGAATCCGCCAGCAGAATCCGCTTGTAAAGATTACGGCCTAGGAAACCCTGTGGGGCAGTTCTACTCTGTGATAGGGTCACGGGAGGCAAACAG | TATTTCCAGGCAAGAGGAAGAACGACGTAGAAGGGAGGAAGAGATGATGATTCGTCAACGTGAGATGGAAGAACAAATGAGACGCCAAAGAGAGGAAAGCTACAGCCGGATGGGCTACATGGATCCAGTAAGTTCACTTTTTTGCAGTCGTTGGAATTTTCTACAGAACTTGTGGGTACCTAGAATGAAGTTTTACCCAGTTAAATGAAAAATGTAATGTCTCACATTATAGCCATTATTTTCTTTATAATAGTT | ATTTCCAGGCAAGAGGAAGAACGACGTAGGAGGGAAGAAGAGATGATGATTCGTCAACGTGAGATGGAAGAACAGATGAGACGCCAAAGAGAGGAAAGTTATAGTCGGATGGGCTATATGGATCCAGTAAGTAAACTTTTGCAATGTAATCGGAGTTTTCTACAGAATTTGTGGATACCTAGGGTGCAGTTTATTCAGTTAAATGTCACTTTTCACATGGTAGCTATTCTACCTTTTTCTTTCTTTCTTTTTAAC | TGGATCCAGTAAGTATACTTCTGTTGTGATCTAATTGGAGTTGTCTATAAAACTTGTAGGTACCTAGAACGAAATGTTACTCAGTTAAGTAGAACATTTTGCATTATAGCTAATTTGTGTGTGTGTGTGAGGAAGACTGGCCCTGAGCTAACATGTGTTGCTAATCTTCTTTTTGCTTGAGGAAGATTGTCCCTGAGCTAACATCTGTGCCAATCTTCCTCTATTTTATATGTGGGACACCGCCACAGTACGGCT | CATGGATGACACTTTGTTTTATATGCCTGAAAAATATTTGTAGGCAAGAGGAGGAACGGCGTAGACGAGAGGAAGAGATGATGATTCGCCAACGTGAGATGGAAGAACAAATGAGACGCCAACGAGAAGAAAGTTACAGCAGGATGGGCTACATGGATCCAGTAAGTTTTTATCCATTGTAAGTGTACACTCACTCAGGCGTGGCTGTTTTGTTTTGTGTGTATAAACTCCTATCAGATCTTGCTGGACCAAATG | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | CTAGGCAAGAGGAGGAACGACGTAGAAGAGAGGAAGAGATGATGATTCGTCAACGTGAGATGGAAGAACAAATGAGGCGCCAAAGAGAGGAAAGTTACAGCCGAATGGGCTACATGGATCCAGTAAGTCAGCCTTTACTGCCTTCCAATTGGAGTTGTCTATAGAACTTGCAGGTACCTAGAAGGAATTACAGGAAATTTTAATATCAAATTACAGTTATTTTCTGCTTTTTTTCTAACAAAGTATATTATGTTT | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN[SEQ]GAGATGGAAGAACAAATGAGACGCCAAAGAGAGGAAAGTTACAGCAGGATGGGCTACATG... | TCAGCCTTTACTGCCTTCCAATTGGAGTTGTCTATAGAACTTGCAGGTACCTAGAAGGAATTACAGGAAATTTTAATATCAAATTACAGTTATTTTCTGCTTTTTTTCTAACAAAGTATATTATGTTT | GCAGCCTTTACTGCCTTCCAATTGGAGTTGTCTATAGAACTTGCAGGTACCTAGAAGGAATTACAGGAAATTTTAATATCAAATTACAGTTATTTTCTGCTTTTTTTCTAACAAAGTATATTATGTTT | true | true | true | 1 | 35,187,839 | 35,188,094 | - | zoonomia-rag-v1 | sge|1:35187967:A>C|- |
1 | 35,187,967 | A | G | true | splicing | SFPQ | sge | urn:mavedb:00001265-a-1 | -0.122606 | null | null | null | null | G | null | null | null | null | null | null | null | null | null | splicing_variant | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | splice_donor_region_variant | splice_donor_region_variant | ENSG00000116560 | 5 | ENSG00000116560 | 5 | 5 | ENSG00000116560 | splice_donor_region_variant | ENSG00000116560 | 5,177 | ENSG00000116560 | 74 | 74 | ENSG00000116560 | splicing | urn:mavedb:00001265-a-1#83 | NC_000001.11:g.35187967A>G | NA | NA | -0.122606 | chr1 | 35,187,967 | A | SFPQ_X7 | SFPQ_X7B | 0.067752 | 0.010187 | -0.255399 | --- | p- | p- | functionally_abnormal | 1 | 0 | PASS | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | Cell proliferation assay | Chemical-based transfection | Nuclease | SpCas9 | Single-dimensional data | Loss of function | Immortalized human cells | Direct sequencing | Single-segment (short read) | Endogenous locus library method | null | abnormal | abnormal | Investigator-provided functional classes | null | 1 | -0.122606 | 1:35187967:A>G | sge_00000006 | 35,187,966 | 35,187,839 | 35,188,094 | AAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTAG | zoonomia-rag-direct-hal-v1 | null | null | null | null | false | false | GL010061.1 | 14,197,947 | 14,198,202 | + | true | true | TolMat_scaffold_339430 | 3,250 | 3,505 | + | true | true | CM000179.6 | 111,552,698 | 111,552,953 | - | true | true | CM000378.2 | 22,062,885 | 22,063,140 | - | true | true | chr4 | 127,026,725 | 127,026,980 | - | true | true | null | null | null | null | false | false | + | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | CTGTTTGCCTCCCGTGACCCTATCACAGAGTAGAACTGCCCCACAGGGTTTCCTAGGCCGTAATCTTTACAAGCGGATTCTGCTGGCGGATTCGAACCACCAACCTTTCAATTAGCAATTGAGTGCTTAACCAATGTACCACCAGGGCTCCTTACAAGTTCTGTAGGCAGCTCAAATTTGACAACTTACTGGATCCATGTAGCCCATCCTGCTGTAACTTTCCTCTCTTTGGCGTCTCATTTGTTCTTCCATCTC | AACTATTATAAAGAAAATAATGGCTATAATGTGAGACATTACATTTTTCATTTAACTGGGTAAAACTTCATTCTAGGTACCCACAAGTTCTGTAGAAAATTCCAACGACTGCAAAAAAGTGAACTTACTGGATCCATGTAGCCCATCCGGCTGTAGCTTTCCTCTCTTTGGCGTCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCCCTTCTACGTCGTTCTTCCTCTTGCCTGGAAATA | GTTAAAAAGAAAGAAAGAAAAAGGTAGAATAGCTACCATGTGAAAAGTGACATTTAACTGAATAAACTGCACCCTAGGTATCCACAAATTCTGTAGAAAACTCCGATTACATTGCAAAAGTTTACTTACTGGATCCATATAGCCCATCCGACTATAACTTTCCTCTCTTTGGCGTCTCATCTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCTTCCCTCCTACGTCGTTCTTCCTCTTGCCTGGAAAT | AGCCGTACTGTGGCGGTGTCCCACATATAAAATAGAGGAAGATTGGCACAGATGTTAGCTCAGGGACAATCTTCCTCAAGCAAAAAGAAGATTAGCAACACATGTTAGCTCAGGGCCAGTCTTCCTCACACACACACACAAATTAGCTATAATGCAAAATGTTCTACTTAACTGAGTAACATTTCGTTCTAGGTACCTACAAGTTTTATAGACAACTCCAATTAGATCACAACAGAAGTATACTTACTGGATCCA | CATTTGGTCCAGCAAGATCTGATAGGAGTTTATACACACAAAACAAAACAGCCACGCCTGAGTGAGTGTACACTTACAATGGATAAAAACTTACTGGATCCATGTAGCCCATCCTGCTGTAACTTTCTTCTCGTTGGCGTCTCATTTGTTCTTCCATCTCACGTTGGCGAATCATCATCTCTTCCTCTCGTCTACGCCGTTCCTCCTCTTGCCTACAAATATTTTTCAGGCATATAAAACAAAGTGTCATCCATG | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | AAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTAG | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN[SEQ]CTGTTTGCCTCCCGTGACCCTATCACAGAGTAGAACTGCCCCACAGGGTTTCCTAGGCCG... | ACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTAG | GCTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTAG | true | true | true | 1 | 35,187,839 | 35,188,094 | + | zoonomia-rag-v1 | sge|1:35187967:A>G|+ |
1 | 35,187,967 | A | G | true | splicing | SFPQ | sge | urn:mavedb:00001265-a-1 | -0.122606 | null | null | null | null | G | null | null | null | null | null | null | null | null | null | splicing_variant | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | splice_donor_region_variant | splice_donor_region_variant | ENSG00000116560 | 5 | ENSG00000116560 | 5 | 5 | ENSG00000116560 | splice_donor_region_variant | ENSG00000116560 | 5,177 | ENSG00000116560 | 74 | 74 | ENSG00000116560 | splicing | urn:mavedb:00001265-a-1#83 | NC_000001.11:g.35187967A>G | NA | NA | -0.122606 | chr1 | 35,187,967 | A | SFPQ_X7 | SFPQ_X7B | 0.067752 | 0.010187 | -0.255399 | --- | p- | p- | functionally_abnormal | 1 | 0 | PASS | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | Cell proliferation assay | Chemical-based transfection | Nuclease | SpCas9 | Single-dimensional data | Loss of function | Immortalized human cells | Direct sequencing | Single-segment (short read) | Endogenous locus library method | null | abnormal | abnormal | Investigator-provided functional classes | null | 1 | -0.122606 | 1:35187967:A>G | sge_00000006 | 35,187,966 | 35,187,839 | 35,188,094 | AAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTAG | zoonomia-rag-direct-hal-v1 | null | null | null | null | false | false | GL010061.1 | 14,197,947 | 14,198,202 | + | true | true | TolMat_scaffold_339430 | 3,250 | 3,505 | + | true | true | CM000179.6 | 111,552,698 | 111,552,953 | - | true | true | CM000378.2 | 22,062,885 | 22,063,140 | - | true | true | chr4 | 127,026,725 | 127,026,980 | - | true | true | null | null | null | null | false | false | - | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | GAGATGGAAGAACAAATGAGACGCCAAAGAGAGGAAAGTTACAGCAGGATGGGCTACATGGATCCAGTAAGTTGTCAAATTTGAGCTGCCTACAGAACTTGTAAGGAGCCCTGGTGGTACATTGGTTAAGCACTCAATTGCTAATTGAAAGGTTGGTGGTTCGAATCCGCCAGCAGAATCCGCTTGTAAAGATTACGGCCTAGGAAACCCTGTGGGGCAGTTCTACTCTGTGATAGGGTCACGGGAGGCAAACAG | TATTTCCAGGCAAGAGGAAGAACGACGTAGAAGGGAGGAAGAGATGATGATTCGTCAACGTGAGATGGAAGAACAAATGAGACGCCAAAGAGAGGAAAGCTACAGCCGGATGGGCTACATGGATCCAGTAAGTTCACTTTTTTGCAGTCGTTGGAATTTTCTACAGAACTTGTGGGTACCTAGAATGAAGTTTTACCCAGTTAAATGAAAAATGTAATGTCTCACATTATAGCCATTATTTTCTTTATAATAGTT | ATTTCCAGGCAAGAGGAAGAACGACGTAGGAGGGAAGAAGAGATGATGATTCGTCAACGTGAGATGGAAGAACAGATGAGACGCCAAAGAGAGGAAAGTTATAGTCGGATGGGCTATATGGATCCAGTAAGTAAACTTTTGCAATGTAATCGGAGTTTTCTACAGAATTTGTGGATACCTAGGGTGCAGTTTATTCAGTTAAATGTCACTTTTCACATGGTAGCTATTCTACCTTTTTCTTTCTTTCTTTTTAAC | TGGATCCAGTAAGTATACTTCTGTTGTGATCTAATTGGAGTTGTCTATAAAACTTGTAGGTACCTAGAACGAAATGTTACTCAGTTAAGTAGAACATTTTGCATTATAGCTAATTTGTGTGTGTGTGTGAGGAAGACTGGCCCTGAGCTAACATGTGTTGCTAATCTTCTTTTTGCTTGAGGAAGATTGTCCCTGAGCTAACATCTGTGCCAATCTTCCTCTATTTTATATGTGGGACACCGCCACAGTACGGCT | CATGGATGACACTTTGTTTTATATGCCTGAAAAATATTTGTAGGCAAGAGGAGGAACGGCGTAGACGAGAGGAAGAGATGATGATTCGCCAACGTGAGATGGAAGAACAAATGAGACGCCAACGAGAAGAAAGTTACAGCAGGATGGGCTACATGGATCCAGTAAGTTTTTATCCATTGTAAGTGTACACTCACTCAGGCGTGGCTGTTTTGTTTTGTGTGTATAAACTCCTATCAGATCTTGCTGGACCAAATG | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | CTAGGCAAGAGGAGGAACGACGTAGAAGAGAGGAAGAGATGATGATTCGTCAACGTGAGATGGAAGAACAAATGAGGCGCCAAAGAGAGGAAAGTTACAGCCGAATGGGCTACATGGATCCAGTAAGTCAGCCTTTACTGCCTTCCAATTGGAGTTGTCTATAGAACTTGCAGGTACCTAGAAGGAATTACAGGAAATTTTAATATCAAATTACAGTTATTTTCTGCTTTTTTTCTAACAAAGTATATTATGTTT | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN[SEQ]GAGATGGAAGAACAAATGAGACGCCAAAGAGAGGAAAGTTACAGCAGGATGGGCTACATG... | TCAGCCTTTACTGCCTTCCAATTGGAGTTGTCTATAGAACTTGCAGGTACCTAGAAGGAATTACAGGAAATTTTAATATCAAATTACAGTTATTTTCTGCTTTTTTTCTAACAAAGTATATTATGTTT | CCAGCCTTTACTGCCTTCCAATTGGAGTTGTCTATAGAACTTGCAGGTACCTAGAAGGAATTACAGGAAATTTTAATATCAAATTACAGTTATTTTCTGCTTTTTTTCTAACAAAGTATATTATGTTT | true | true | true | 1 | 35,187,839 | 35,188,094 | - | zoonomia-rag-v1 | sge|1:35187967:A>G|- |
1 | 35,187,967 | A | T | true | splicing | SFPQ | sge | urn:mavedb:00001265-a-1 | -0.215358 | null | null | null | null | T | null | null | null | null | null | null | null | null | null | splicing_variant | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | splice_donor_region_variant | splice_donor_region_variant | ENSG00000116560 | 5 | ENSG00000116560 | 5 | 5 | ENSG00000116560 | splice_donor_region_variant | ENSG00000116560 | 5,177 | ENSG00000116560 | 74 | 74 | ENSG00000116560 | splicing | urn:mavedb:00001265-a-1#84 | NC_000001.11:g.35187967A>T | NA | NA | -0.215358 | chr1 | 35,187,967 | A | SFPQ_X7 | SFPQ_X7B | 0.068086 | -0.08191 | -0.348807 | --- | p- | p- | functionally_abnormal | 1 | 0 | PASS | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | Cell proliferation assay | Chemical-based transfection | Nuclease | SpCas9 | Single-dimensional data | Loss of function | Immortalized human cells | Direct sequencing | Single-segment (short read) | Endogenous locus library method | null | abnormal | abnormal | Investigator-provided functional classes | null | 1 | -0.215358 | 1:35187967:A>T | sge_00000007 | 35,187,966 | 35,187,839 | 35,188,094 | AAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTAG | zoonomia-rag-direct-hal-v1 | null | null | null | null | false | false | GL010061.1 | 14,197,947 | 14,198,202 | + | true | true | TolMat_scaffold_339430 | 3,250 | 3,505 | + | true | true | CM000179.6 | 111,552,698 | 111,552,953 | - | true | true | CM000378.2 | 22,062,885 | 22,063,140 | - | true | true | chr4 | 127,026,725 | 127,026,980 | - | true | true | null | null | null | null | false | false | + | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | CTGTTTGCCTCCCGTGACCCTATCACAGAGTAGAACTGCCCCACAGGGTTTCCTAGGCCGTAATCTTTACAAGCGGATTCTGCTGGCGGATTCGAACCACCAACCTTTCAATTAGCAATTGAGTGCTTAACCAATGTACCACCAGGGCTCCTTACAAGTTCTGTAGGCAGCTCAAATTTGACAACTTACTGGATCCATGTAGCCCATCCTGCTGTAACTTTCCTCTCTTTGGCGTCTCATTTGTTCTTCCATCTC | AACTATTATAAAGAAAATAATGGCTATAATGTGAGACATTACATTTTTCATTTAACTGGGTAAAACTTCATTCTAGGTACCCACAAGTTCTGTAGAAAATTCCAACGACTGCAAAAAAGTGAACTTACTGGATCCATGTAGCCCATCCGGCTGTAGCTTTCCTCTCTTTGGCGTCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCCCTTCTACGTCGTTCTTCCTCTTGCCTGGAAATA | GTTAAAAAGAAAGAAAGAAAAAGGTAGAATAGCTACCATGTGAAAAGTGACATTTAACTGAATAAACTGCACCCTAGGTATCCACAAATTCTGTAGAAAACTCCGATTACATTGCAAAAGTTTACTTACTGGATCCATATAGCCCATCCGACTATAACTTTCCTCTCTTTGGCGTCTCATCTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCTTCCCTCCTACGTCGTTCTTCCTCTTGCCTGGAAAT | AGCCGTACTGTGGCGGTGTCCCACATATAAAATAGAGGAAGATTGGCACAGATGTTAGCTCAGGGACAATCTTCCTCAAGCAAAAAGAAGATTAGCAACACATGTTAGCTCAGGGCCAGTCTTCCTCACACACACACACAAATTAGCTATAATGCAAAATGTTCTACTTAACTGAGTAACATTTCGTTCTAGGTACCTACAAGTTTTATAGACAACTCCAATTAGATCACAACAGAAGTATACTTACTGGATCCA | CATTTGGTCCAGCAAGATCTGATAGGAGTTTATACACACAAAACAAAACAGCCACGCCTGAGTGAGTGTACACTTACAATGGATAAAAACTTACTGGATCCATGTAGCCCATCCTGCTGTAACTTTCTTCTCGTTGGCGTCTCATTTGTTCTTCCATCTCACGTTGGCGAATCATCATCTCTTCCTCTCGTCTACGCCGTTCCTCCTCTTGCCTACAAATATTTTTCAGGCATATAAAACAAAGTGTCATCCATG | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | AAACATAATATACTTTGTTAGAAAAAAAGCAGAAAATAACTGTAATTTGATATTAAAATTTCCTGTAATTCCTTCTAGGTACCTGCAAGTTCTATAGACAACTCCAATTGGAAGGCAGTAAAGGCTGACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTAG | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN[SEQ]CTGTTTGCCTCCCGTGACCCTATCACAGAGTAGAACTGCCCCACAGGGTTTCCTAGGCCG... | ACTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTAG | TCTTACTGGATCCATGTAGCCCATTCGGCTGTAACTTTCCTCTCTTTGGCGCCTCATTTGTTCTTCCATCTCACGTTGACGAATCATCATCTCTTCCTCTCTTCTACGTCGTTCCTCCTCTTGCCTAG | true | true | true | 1 | 35,187,839 | 35,188,094 | + | zoonomia-rag-v1 | sge|1:35187967:A>T|+ |
marin-dna/evals_sge_rag_harness_255_v1
Retrieval-conditioned, eval-harness-ready SGE SNV benchmark for the MarinDNA SGE leaderboard. Each row contains seven fully materialized Zoonomia ortholog slots, the shared 127-base human prefix, and separate reference/alternate completions. Every source variant has forward and reverse-complement rows.
Produced by the commit-pinned issue #402 RAG pipeline.
| Split | Source variants | Materialized rows |
|---|---|---|
| train | 23,853 | 47,706 |
| test | 14,888 | 29,776 |
Frozen document contract
- Species order/version:
zoonomia-rag-v1; human is slot 7. - Projection/version:
zoonomia-rag-direct-hal-v1. contextis 1,919 tokens before BOS: seven 255-base non-human slots, seven atomic[SEQ]boundaries, and the shared 127-base human prefix.- Each completion is 128 bases; BOS + context + completion is exactly 2,048 tokens.
- The centered SNV is absolute token index 1920.
- Missing projections are exactly 255
Nbases.
Every exact unique human window was projected directly with
halLiftover --noDupes against the pinned Zoonomia 447-mammalian 2022 v1 HAL,
then filtered and strand-normalized with the same issue #402 quality contract.
Model scoring needs only this pinned dataset and a checkpoint.
Provenance
- Source:
marin-dna/evals_sgeat225d3d1ea32a4af547891b13c33b5e92a5aae849(GRCh38, sourceposis 1-based). - Score protocol:
minus_llr. - Alignment source leaf:
Homo_sapiens. - Derived genomic coordinates: 0-based, half-open.
manifest.json records exact revisions, counts, projection settings, and
per-species availability. All original source columns are retained.
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