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The dataset generation failed because of a cast error
Error code: DatasetGenerationCastError
Exception: DatasetGenerationCastError
Message: An error occurred while generating the dataset
All the data files must have the same columns, but at some point there are 1 new columns ({'ContamPct'}) and 1 missing columns ({'Amplitude'}).
This happened while the csv dataset builder was generating data using
hf://datasets/ldyballa/vis-coding-blocks/719161530-probeC-b9-kilosort4-output/cluster_ContamPct.tsv (at revision 538f18256d18780fa55ae2b6befbc9f2f90e07df)
Please either edit the data files to have matching columns, or separate them into different configurations (see docs at https://hf.co/docs/hub/datasets-manual-configuration#multiple-configurations)
Traceback: Traceback (most recent call last):
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1871, in _prepare_split_single
writer.write_table(table)
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/arrow_writer.py", line 643, in write_table
pa_table = table_cast(pa_table, self._schema)
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/table.py", line 2293, in table_cast
return cast_table_to_schema(table, schema)
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/table.py", line 2241, in cast_table_to_schema
raise CastError(
datasets.table.CastError: Couldn't cast
cluster_id: int64
ContamPct: double
-- schema metadata --
pandas: '{"index_columns": [{"kind": "range", "name": null, "start": 0, "' + 497
to
{'cluster_id': Value(dtype='int64', id=None), 'Amplitude': Value(dtype='float64', id=None)}
because column names don't match
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 1428, in compute_config_parquet_and_info_response
parquet_operations, partial, estimated_dataset_info = stream_convert_to_parquet(
File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 989, in stream_convert_to_parquet
builder._prepare_split(
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1742, in _prepare_split
for job_id, done, content in self._prepare_split_single(
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1873, in _prepare_split_single
raise DatasetGenerationCastError.from_cast_error(
datasets.exceptions.DatasetGenerationCastError: An error occurred while generating the dataset
All the data files must have the same columns, but at some point there are 1 new columns ({'ContamPct'}) and 1 missing columns ({'Amplitude'}).
This happened while the csv dataset builder was generating data using
hf://datasets/ldyballa/vis-coding-blocks/719161530-probeC-b9-kilosort4-output/cluster_ContamPct.tsv (at revision 538f18256d18780fa55ae2b6befbc9f2f90e07df)
Please either edit the data files to have matching columns, or separate them into different configurations (see docs at https://hf.co/docs/hub/datasets-manual-configuration#multiple-configurations)Need help to make the dataset viewer work? Make sure to review how to configure the dataset viewer, and open a discussion for direct support.
cluster_id int64 | Amplitude float64 |
|---|---|
0 | 23.5 |
1 | 17.3 |
2 | 43.9 |
3 | 16 |
4 | 9.9 |
5 | 13.4 |
6 | 10 |
7 | 21.7 |
8 | 37.8 |
9 | 12.6 |
10 | 20.7 |
11 | 14.2 |
12 | 10.7 |
13 | 17.4 |
14 | 15.9 |
15 | 10.7 |
16 | 9.7 |
17 | 25.1 |
18 | 10.8 |
19 | 25.5 |
20 | 28.2 |
21 | 9.6 |
22 | 9.7 |
23 | 9.8 |
24 | 13.4 |
25 | 10.3 |
26 | 27.5 |
27 | 10.2 |
28 | 26 |
29 | 29.4 |
30 | 15.8 |
31 | 26.1 |
32 | 16.2 |
33 | 8.8 |
34 | 9.3 |
35 | 9.8 |
36 | 14.4 |
37 | 9.4 |
38 | 10.5 |
39 | 11 |
40 | 25.6 |
41 | 23.9 |
42 | 19.3 |
43 | 9.4 |
44 | 9.2 |
45 | 21.1 |
46 | 12.9 |
47 | 9.1 |
48 | 10.2 |
49 | 22.6 |
50 | 9 |
51 | 10.4 |
52 | 20.4 |
53 | 10 |
54 | 11.8 |
55 | 10.5 |
56 | 18.9 |
57 | 10.1 |
58 | 20.5 |
59 | 11 |
60 | 9.2 |
61 | 12.7 |
62 | 11.7 |
63 | 20.2 |
64 | 9.2 |
65 | 9.6 |
66 | 9.7 |
67 | 10.5 |
68 | 42 |
69 | 12.1 |
70 | 14.7 |
71 | 17.6 |
72 | 27.7 |
73 | 9.4 |
74 | 21.2 |
75 | 10 |
76 | 9.8 |
77 | 9.9 |
78 | 25.6 |
79 | 20.4 |
80 | 19.6 |
81 | 9.9 |
82 | 20.9 |
83 | 12.3 |
84 | 9.6 |
85 | 10.4 |
86 | 9.3 |
87 | 11.8 |
88 | 10.8 |
89 | 17.9 |
90 | 13 |
91 | 17.2 |
92 | 19.8 |
93 | 10.1 |
94 | 10.2 |
95 | 25.9 |
96 | 9.4 |
97 | 10 |
98 | 22.8 |
99 | 12.8 |
End of preview.
This repo contains snippets of the neuropixels recordings from the Allen Institute Visual Coding dataset:
Siegle, J. H., Jia, X., Durand, S., et al. (2021). Survey of spiking in the mouse visual system reveals functional hierarchy. Nature, 592(7612), 86-92. https://doi.org/10.1038/s41586-020-03171-x | Dataset: Allen Institute MindScope Program (2019). Allen Brain Observatory -- Neuropixels Visual Coding [Dataset]. Available from brain-map.org/explore/circuits
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