jang1563/agentic-drug-discovery-system

Agentic Drug Discovery System

This is the Hugging Face Dataset-card package for the Agentic Drug Discovery System public artifact. It is a commit-pinned artifact mirror for documentation, schemas, aggregate evidence, release metadata, safety boundaries, and the ctdbench scorer. It is not a row dataset or model release and does not contain raw clinical/regulatory snapshots, hidden labels, locked episodes, generated trajectories, scheduler logs, local paths, credentials, or unpublished working notes.

At A Glance

Field	Value
Repository type	Dataset
Current visibility	Public
Contents	Documentation, schemas, aggregate evidence, manifests, audit code, and the ctdbench scorer.
Not included	Raw source data, hidden labels, generated trajectories, logs, credentials, local paths, or model weights.
Source commit	See upload_manifest.json.

Intended Use

• Review the public system architecture and release boundary.
• Read the caveats-first SCD vertical slice before citing benchmark numbers.
• Read the small-N target-identification results card and aggregate claim ledger.
• Inspect schema and verifier-contract documentation.
• Use benchmark/ to score the separately hosted clinical-trial decision dataset.
• Track provenance for the public artifact surface.
• Inspect the mirrored GitHub release surface and source-commit provenance.

Artifact Map

Path	Purpose
README.md	This Hugging Face Dataset card.
github/README.md	GitHub README preserved inside the Hub mirror.
release_manifest.json	Cross-surface release manifest.
release_decision_packet.json	Machine-readable launch decision packet.
huggingface/release_manifest.json	Hugging Face-specific include/exclude manifest.
upload_manifest.json	Exact uploaded file list and source commit.
docs/release_boundary.md	Public-release boundary and exclusion rules.
docs/release_trust_report.md	Trust claims, machine anchors, and interpretation warnings.
docs/12_scd_vertical_slice.md	Audited SCD vertical slice, with small-N caveats.
docs/13_target_id_governance_node.md	Upstream target-identification results card.
docs/public_evidence_summary.json	Machine-readable aggregate claims and limitations.
benchmark/	Installable ctdbench scorer and tests.
docs/public_launch_checklist.md	Human launch checklist before any visibility change.
scripts/audit/*.py	Local release audits and reproducible Hub package builder.

Not Included

• Raw source snapshots or full case banks.
• Hidden/evaluator labels or locked episode records.
• Generated reward/verifier outputs or run logs.
• Credentials, local machine paths, or private infrastructure details.
• Model weights or an executable autonomous discovery system.
• Croissant metadata for jang1563/clinical-trial-decision-benchmark; that metadata belongs to the separate external dataset, not this artifact mirror.

Linked External Dataset

The scorer in benchmark/ targets https://huggingface.co/datasets/jang1563/clinical-trial-decision-benchmark. That dataset has its own card, rows, and Croissant metadata. This repository's Hub package intentionally does not duplicate those data or metadata.

Validation Before Upload

Run these checks from the GitHub repository root before creating or updating the Hugging Face repository:

python3 scripts/audit/github_release_file_audit.py
python3 scripts/audit/validate_hf_release_package.py
python3 scripts/audit/validate_public_launch_packet.py
python3 scripts/audit/validate_vertical_slice_doc.py
python3 -m pytest -q benchmark/tests
python3 scripts/audit/build_hf_release_package.py --output /tmp/agentic-hf-release-package --force
python3 scripts/audit/validate_hf_release_package.py --package /tmp/agentic-hf-release-package
git diff --check
python3 -m compileall adapters chains benchmark/src scripts/audit

Hub Placement

• Repository type: Dataset
• Repo id: jang1563/agentic-drug-discovery-system
• Current visibility: public
• Public visibility: approved after final boundary review

Source

Primary source repository:

https://github.com/jang1563/agentic-drug-discovery-system