OmicsBench

OmicsBench is a long-horizon, multi-turn bioinformatics benchmark for AI agents. Each task links dependent subtasks into a directed acyclic graph, which the agent works through one user turn at a time. Every answer is graded deterministically against an answer key, with optional in-context feedback when it is incorrect. This repository holds the benchmark's runner and its three public tasks.

Contents

• omicsbench_runner/: the evaluation runner and all graders. Installation and usage are in omicsbench_runner/README.md.
• questions/: three public tasks with their answer keys.
• data/: the datasets of those tasks.