readout string | prediction_tasks list | upstream_seq string | downstream_seq string | sequences dict | prediction_ranges dict |
|---|---|---|---|---|---|
interaction_matrix | [
{
"name": "K562_linear",
"type": "expression",
"cell_type": "K562",
"species": "homo_sapiens",
"scale": "linear"
},
{
"name": "K562_log",
"type": "expression",
"cell_type": "K562",
"species": "homo_sapiens",
"scale": "log"
},
{
"name": "hepg2_linear",
"type": ... | ATGCATGC | GCTAGCTA | {
"short_seq": "ATCGATCGATGCTAC",
"boundary_1000": "ATGCATGATGCTACGTACGATCGTAGCTGCATGCTAGCGATCGTAGCTAGCTGACTGATCGTAGGGTACGACTGTAGCTCAGTCGATCTGAAAAAAAAAATGCATGATGCTACGTACGATCGTAGCTGCATGCTAGCGATCGTAGCTAGCTGACTGATCGTAGGGTACGACTGTAGCTCAGTCGATCTGAAAAAAAAAATGCATGATGCTACGTACGATCGTAGCTGCATGCTAGCGATCGTAGCTAGCTGACTGATCGTAGGG... | {
"short_seq": [
0,
2
],
"boundary_1000": [
100,
900
],
"long_seq": [
300,
2999
],
"range_at_start": [
0,
10
],
"range_at_end": [
89,
99
],
"full_range": [
0,
99
],
"empty_range": []
} |
YAML Metadata Warning:empty or missing yaml metadata in repo card
Check out the documentation for more information.
GAME Schema Version: v 1.0 Github Link: https://github.com/de-Boer-Lab/Genomic-API-for-Model-Evaluation/tree/main/src/Test_Modules
Additional information can be found on GitHub: Genomic API for Model Evaluation
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