Datasets:

carlomarxx
/

synthea-workshop-data

patient_id int64	split large_string	eligible bool	severe_within_5y int8	age_at_index float64	sex large_string	income int64	marital large_string	race large_string	ethnicity large_string	county large_string	n_events_before_index int64	died_before_index bool
1	train	true	0	32.85	F	116,206	M	white	nonhispanic	Worcester County	154	false
2	train	true	0	41.07	M	545,578	D	native	nonhispanic	Essex County	44	false
3	train	false	0	50.11	M	23,434	M	white	nonhispanic	Norfolk County	93	true
7	train	true	0	43.21	M	7,881	M	asian	hispanic	Bristol County	37	false
15	train	true	0	31.61	F	78,886	M	asian	nonhispanic	Norfolk County	101	false
19	test	true	0	50.11	M	23,434	M	white	nonhispanic	Norfolk County	98	false
20	test	true	0	54.39	F	167,027	M	white	nonhispanic	Worcester County	115	false
21	train	false	0	47.98	F	4,662	D	white	nonhispanic	Barnstable County	195	true
23	train	true	1	57.12	F	93,144	S	white	nonhispanic	Plymouth County	72	false
24	train	true	0	37.5	F	133,095	M	white	hispanic	Hampshire County	201	false
27	test	true	0	52.07	F	69,292	S	white	hispanic	Essex County	95	false
28	test	false	0	57.14	M	67,537	M	white	nonhispanic	Bristol County	88	false
32	train	true	0	39.36	M	136,240	M	white	hispanic	Nantucket County	33	false
33	train	true	0	59.58	M	275,035	M	white	nonhispanic	Bristol County	104	false
34	test	true	0	47.98	F	4,662	S	white	nonhispanic	Barnstable County	73	false
35	train	true	0	33.27	M	132,900	M	white	nonhispanic	Worcester County	74	false
39	train	false	0	51.96	F	51,434	S	black	nonhispanic	Worcester County	113	true
41	test	true	0	30.72	F	16,194	M	white	nonhispanic	Hampden County	101	false
42	test	true	0	35.74	F	37,980	S	black	nonhispanic	Middlesex County	126	false
47	train	true	0	52.89	F	42,572	D	white	nonhispanic	Bristol County	162	false
49	train	true	0	49.22	M	133,436	M	white	nonhispanic	Middlesex County	40	false
50	test	true	0	43.99	F	110,361	M	white	nonhispanic	Middlesex County	219	false
53	train	true	0	49.91	F	147,031	D	white	nonhispanic	Worcester County	152	false
55	train	true	0	58.62	M	78,464	D	white	nonhispanic	Bristol County	132	false
56	train	false	0	59.93	M	72,644	S	white	nonhispanic	Middlesex County	59	true
57	test	true	0	43.59	M	46,052	D	white	nonhispanic	Essex County	62	false
58	train	true	0	44.54	M	60,646	M	white	nonhispanic	Hampden County	56	false
59	train	false	0	47.66	M	73,055	M	white	nonhispanic	Middlesex County	104	false
61	train	true	0	31.58	M	143,635	M	black	nonhispanic	Norfolk County	30	false
63	train	true	1	45.47	M	129,616	S	white	nonhispanic	Worcester County	82	false
64	train	false	0	48.95	M	32,685	M	white	nonhispanic	Worcester County	74	false
68	train	true	0	49.44	M	61,619	S	white	hispanic	Worcester County	39	false
73	train	true	0	44.41	M	131,494	S	black	nonhispanic	Norfolk County	54	false
74	train	true	0	44.36	F	21,329	S	white	nonhispanic	Bristol County	155	false
75	test	true	0	38.91	M	48,228	M	white	nonhispanic	Essex County	42	false
76	test	true	0	30.54	F	65,678	M	white	nonhispanic	Barnstable County	99	false
82	train	false	0	37.11	F	77,016	null	white	nonhispanic	Norfolk County	262	true
85	test	true	0	45.47	M	129,616	M	white	nonhispanic	Worcester County	28	false
87	train	true	0	51.63	F	44,149	M	white	nonhispanic	Bristol County	88	false
88	train	true	0	42.41	M	44,122	M	white	nonhispanic	Middlesex County	72	false
90	test	true	0	37.11	F	77,016	M	white	nonhispanic	Norfolk County	27	false
92	train	true	0	54.97	M	10,229	W	white	nonhispanic	Middlesex County	95	false
93	test	true	0	46.49	F	95,599	M	white	nonhispanic	Plymouth County	50	false
97	train	true	0	46.76	F	32,855	M	white	nonhispanic	Hampden County	109	false
106	train	true	0	49.44	M	29,835	S	black	nonhispanic	Worcester County	39	false
107	train	true	0	47.84	M	109,644	M	white	nonhispanic	Middlesex County	100	false
113	train	true	0	41.58	M	303,194	M	white	nonhispanic	Worcester County	68	false
114	train	false	0	45.16	F	76,614	null	white	nonhispanic	Worcester County	106	true
117	train	true	0	33.1	F	115,199	S	white	nonhispanic	Bristol County	44	false
118	train	false	0	40.9	F	193,990	M	white	nonhispanic	Plymouth County	214	true
119	train	true	0	46.76	M	47,714	M	white	hispanic	Norfolk County	115	false
121	train	false	0	38.86	M	17,572	D	black	nonhispanic	Suffolk County	144	false
123	train	false	0	57.36	M	93,215	W	black	nonhispanic	Worcester County	234	true
124	train	true	0	55.64	M	98,051	W	white	nonhispanic	Essex County	63	false
125	train	true	0	45.16	F	76,614	M	white	nonhispanic	Worcester County	61	false
126	train	false	1	57.59	M	93,969	M	white	hispanic	Middlesex County	969	false
129	train	true	0	31.75	M	163,088	W	white	nonhispanic	Worcester County	57	false
131	test	true	0	38.63	M	114,626	S	white	nonhispanic	Worcester County	71	false
132	train	true	0	50.17	M	99,676	D	black	nonhispanic	Bristol County	105	false
134	train	true	0	30.33	M	4,398	S	black	nonhispanic	Suffolk County	23	false
138	train	true	1	58.89	M	130,654	M	white	nonhispanic	Middlesex County	95	false
139	train	true	0	57.38	M	27,764	M	white	nonhispanic	Essex County	104	false
143	train	true	0	50.86	M	101,220	M	white	nonhispanic	Middlesex County	114	false
144	test	true	0	44.51	F	30,113	S	white	nonhispanic	Plymouth County	62	false
149	train	true	0	43.26	M	54,992	S	white	nonhispanic	Middlesex County	40	false
151	test	true	0	41.59	M	102,473	M	white	nonhispanic	Bristol County	39	false
153	train	true	1	54.75	M	89,507	S	white	nonhispanic	Norfolk County	130	false
154	test	true	0	30.19	M	199,117	M	white	nonhispanic	Norfolk County	71	false
155	test	true	0	32.91	M	46,175	D	white	nonhispanic	Essex County	42	false
157	test	true	0	40.62	M	41,883	M	white	nonhispanic	Middlesex County	67	false
158	test	true	0	46.82	M	92,521	M	white	nonhispanic	Franklin County	42	false
159	train	false	0	57.46	F	998,229	S	white	nonhispanic	Middlesex County	335	true
160	test	true	0	43.35	F	13,192	S	white	hispanic	Essex County	54	false
168	train	true	0	51.01	M	817,424	M	white	nonhispanic	Norfolk County	86	false
169	train	true	0	31.72	F	58,208	M	white	hispanic	Norfolk County	93	false
172	train	true	0	35.24	F	68,211	S	white	nonhispanic	Worcester County	201	false
174	test	true	0	35.62	F	387,570	S	black	nonhispanic	Middlesex County	110	false
176	train	true	0	47.02	M	86,598	W	white	hispanic	Hampshire County	111	false
181	test	true	0	48.25	M	84,054	S	white	nonhispanic	Bristol County	113	false
182	test	true	0	45.15	M	15,350	M	white	nonhispanic	Worcester County	80	false
183	test	false	0	39.33	F	159,366	null	white	nonhispanic	Suffolk County	88	true
187	train	false	0	56.38	M	131,568	M	white	nonhispanic	Bristol County	126	true
188	train	true	0	32.41	F	23,365	M	white	nonhispanic	Bristol County	66	false
190	test	true	0	33.68	M	79,603	M	white	nonhispanic	Middlesex County	35	false
191	test	true	0	39.24	M	95,616	S	white	nonhispanic	Middlesex County	50	false
193	train	true	0	50.05	M	107,491	M	white	nonhispanic	Worcester County	63	false
196	train	false	0	39.88	F	198,661	null	white	nonhispanic	Middlesex County	26	true
197	train	true	0	38.65	M	11,165	M	white	nonhispanic	Hampden County	27	false
201	test	true	0	44.37	M	33,288	M	black	nonhispanic	Suffolk County	122	false
211	test	true	0	36.5	M	106,380	M	white	nonhispanic	Essex County	50	false
212	train	false	0	43.3	M	982,363	M	asian	nonhispanic	Middlesex County	51	true
214	train	true	0	34.68	F	1,367	M	black	nonhispanic	Bristol County	146	false
215	train	false	0	36.38	F	11,962	M	asian	nonhispanic	Suffolk County	139	false
216	train	false	0	51.07	F	69,430	M	white	nonhispanic	Middlesex County	108	false
217	train	true	0	45.5	M	7,240	M	white	nonhispanic	Barnstable County	43	false
218	train	false	0	36.38	M	26,477	null	white	nonhispanic	Middlesex County	92	true
219	train	true	0	56.38	M	131,568	S	white	nonhispanic	Bristol County	72	false
228	train	true	0	31.86	F	99	M	white	nonhispanic	Hampden County	145	false
231	train	true	0	33.56	F	142,549	M	white	nonhispanic	Middlesex County	55	false
232	train	true	0	43	F	55,148	D	black	nonhispanic	Franklin County	95	false

End of preview. Expand in Data Studio

synthea-workshop-data

Workshop data for Transformer Architectures for Computational Social Science (ICSC 2026, Oxford). A 50,000-patient subsample of a locally generated Synthea population (Massachusetts, ages 35–65, 10 years of history each), split 40,000 train / 10,000 test.

These are not real patients. Synthea is a rule-based simulator. Any structure recovered from this data reflects the generator's rules rather than epidemiology, and no result here says anything about human health.

File	What it is
`sequences.parquet`	One integer-coded event sequence per patient
`cohort.parquet`	One row per patient: labels, background attributes, `split`
`raw-sample.parquet`	500 patients with human-readable event descriptions
`vocabulary.csv`	1036 tokens — 5 special, 46 background, the rest event types
`severe-codes.csv`	The 38-code composite defining the severe-disease outcome
`person-embeddings.npz`	Precomputed frozen encoder embeddings, so Colab skips a forward pass

The downstream task is severe-disease onset, not mortality — mortality leaked catastrophically. The base rate is 5.7%, so report average precision alongside AUC, and score every model against a trivial baseline of age plus record volume.

Pairs with the model at carlomarxx/synthea-bert. Published from carlomarxdk/workshop-transformers at commit ffae814.

Downloads last month: -