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IODS 1000-SPECIES CROSS-TAXON PILOT - VERDICT REPORT |
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[A2] INTER-MODALITY CONGRUENCE (Mantel) |
Magnitude (mean |r|): meta(0.161) > dna(0.145) > pheno(0.066) > geo(0.047) > globi(nan) > audio(0.004) |
Most congruent pair: dna-meta (r=0.435) |
[A4b] FUSION-LEARNED MAGNITUDE |
pheno(0.180) > meta(0.175) > dna(0.171) > globi(0.160) > geo(0.159) > audio(0.156) |
Fusion vs Mantel rank agreement (Spearman rho): 0.700 -> STABLE |
[A5] BIDIRECTIONAL TRANSLATION |
Forward (phenotype->DNA) R2: -0.941 |
Inverse (DNA->phenotype) R2: 0.007 |
Forward surplus over genus-mean: -0.000 |
Symmetry kappa: -0.01 -> SUPPORTED |
[A6] LEAVE-FAMILY-OUT GENERALIZATION |
Mean forward surplus: -0.000 +/- 0.000 |
Surplus t-test p: 0.003 |
A6 verdict: No signal beyond phylogeny at this scale |
[A7] g-FUNCTION CROSS-TAXON STRUCTURE |
Within- vs between-circle g: d=0.318, MWU p=1.58e-36 -> C3 SUPPORTED |
Within- vs between-taxon g: d=1.660, MWU p=0 |
Cross-taxon NN retrieval: 0.0% over 100 birds (chance 0.11%) -> AT CHANCE |
Notable cross-taxon dominant modalities: |
bird-insect: dominant=geo (n=2000) |
bird-mammal: dominant=geo (n=2000) |
bird-reptile: dominant=geo (n=2000) |
bird-amphibian: dominant=geo (n=2000) |
bird-plant: dominant=geo (n=2000) |
bird-fungus: dominant=geo (n=2000) |
FINAL VERDICT TABLE |
CONDITION RESULT STATUS |
C1: Bidirectionality (kappa<2.5) kappa=-0.01 SUPPORTED |
C2: Surplus over phylogeny -0.000+/-0.000 NONE |
C3: Symbiotic context improves d=0.32 SUPPORTED |
Magnitude hierarchy stable rho=0.70 STABLE |
Cross-taxon retrieval 0.0% vs 0.11% AT CHANCE |
Leave-family-out generalization p=0.003 OVERFITS |
OVERALL: The 1000-species cross-taxon pilot partially supports the IODS framework's core predictions. (3/6 conditions met) |
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IODS-1000 DATA QUALITY REPORT |
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Total species groups in HDF5: 1000 |
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COVERAGE MATRIX (count/total = percentage) |
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taxon_group gbif dna otol globi audio total |
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bird 99/100 99% 100/100 100% 100/100 100% 93/100 93% 97/100 97% 100 |
insect 500/500 100% 484/500 97% 499/500 100% 347/500 69% 0/500 0% 500 |
mammal 150/150 100% 147/150 98% 150/150 100% 113/150 75% 0/150 0% 150 |
reptile 69/70 99% 70/70 100% 70/70 100% 56/70 80% 0/70 0% 70 |
amphibian 30/30 100% 30/30 100% 30/30 100% 26/30 87% 0/30 0% 30 |
plant 99/100 99% 100/100 100% 100/100 100% 87/100 87% 0/100 0% 100 |
fungus 50/50 100% 6/50 12% 50/50 100% 38/50 76% 0/50 0% 50 |
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ALL 997/1000 100% 937/1000 94% 999/1000 100% 760/1000 76% 97/1000 10% 1000 |
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NETWORK STATISTICS |
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Nodes: 760 |
Edges: 1517 |
Density: 0.005260 |
Top 10 most-connected species: |
Fraxinus excelsior (plant): 36 edges |
Canis lupus (mammal): 36 edges |
Pinus sylvestris (plant): 31 edges |
Plecotus auritus (mammal): 29 edges |
Vulpes vulpes (mammal): 27 edges |
Quercus robur (plant): 26 edges |
Fagus sylvatica (plant): 26 edges |
Eptesicus serotinus (mammal): 25 edges |
Nyctalus lasiopterus (mammal): 24 edges |
Cirsium arvense (plant): 22 edges |
Cross-taxon edge counts: |
insect-plant: 317 |
insect-insect: 255 |
mammal-mammal: 140 |
bird-plant: 110 |
insect-mammal: 105 |
bird-bird: 85 |
bird-mammal: 84 |
mammal-plant: 80 |
fungus-plant: 69 |
bird-insect: 66 |
reptile-reptile: 59 |
plant-plant: 43 |
amphibian-reptile: 21 |
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