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RNA Velocity Benchmark Data
Benchmark inputs, native method outputs and figure/table Source Data for the RNA velocity benchmark.
| Collection | Contents | Access |
|---|---|---|
| Inputs | 25 files for 14 real datasets and three simulation scenarios; 4.82 GB | Files, index |
| Method outputs | 388 scientific files in 339 download objects; 150.61 GB | Files, package index |
| Source Data | 376 files for Figures 1–7, S1–S15 and Tables S1–S9 | Browse, complete ZIP |
Simulation inputs contain noisy observations, full-gene clean spliced/unspliced states and their ODE velocities. MultiVelo Cell outputs include normalized spliced velocity and its graph/projection; Gene evaluation uses native components.
Download
available_files.tsv lists paths, sizes and SHA-256 values.
Extract each TAR.GZ package into its own directory and check its original files
against the member index.
NPZ files load directly with numpy.load(path, allow_pickle=False).
The data guide
defines evaluator input layouts and source identities.
The Source Data panel index and array dictionary describe fields, units and aggregation. Simulation reference arrays cover the evaluated 10/20/40 genes; input H5ADs contain full-gene references.
Attribution
Cite the original datasets and methods together with this collection; see CITATION.cff. Dataset-specific terms and source accessions are in SOURCE_TERMS.tsv and SOURCE_TERMS.md. Obtain Battich kinetic-reference Tables S1/S3/S4 through the reference guide.
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