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3D LLM Diffusion: Tri-Modal Assets v11

This dataset repository contains the large data artifacts required to reproduce the v11 text/XRD/crystal routing layer and train the released Qwen latent adapter. It accompanies Yangfan78/3D_LLM_Diffusion-trimodal-qwen-v11.

Contents

Path Contents
embeddings/trimodal_cond_emb_v11/ final v11 train/validation/benchmark latent tables
corpus/mm_corpus/ 27,136 train and 9,047 validation text records plus alignment targets
data/mp20_props/ processed MP20 property targets used by the multi-property model
data/mp20_raw/ portable train/validation/test CSV splits used by this project
prompts/prompt_bench_v1/ fixed conditional-generation prompt benchmark
xrd/xrd_hard_negatives/ hard-negative metadata/artifacts
xrd/xrd_cache_cscs_20260720.tar 45,229 cached synthetic XRD tensors, packed to preserve HPC inode quota
evaluation/completeness_v11_20260702/ v11 completeness evaluation artifacts
evaluation/planner_orb_genbench_all2500_20260719/ complete 2,500 raw/ORB CIF pools, generation and relaxation audits, pinned LeMat GenBench results, and intermediate benchmark artifacts
manifest/ARTIFACT_MANIFEST.json sizes and SHA-256 checksums

The XRD cache contains simulated powder patterns. It must not be interpreted as an experimental diffraction dataset. Downstream users are responsible for checking the provenance and usage terms of upstream Materials Project data.

Qwen Adapter Pairing

Each corpus split has complete one-to-one ID coverage with its 256-dimensional target table:

Split Text rows Target rows Shared IDs
Train 27,136 27,136 27,136
Validation 9,047 9,047 9,047

The input-side adapter uses pooled hidden states from Qwen/Qwen3.6-35B-A3B revision 995ad96eacd98c81ed38be0c5b274b04031597b0 and maps them into the final v11 256-dimensional shared hub.

The released epoch-99 adapter reaches mean target cosine 0.97135, R@1 0.99359, and R@10 1.00000 on the 9,047 validation pairs. These are latent-target retrieval metrics, not crystal generation metrics.

Full Planner + ORB-v3 Evaluation

The all-2,500 evaluation completed with 96.88% official validity and 0.1643 A mean GenBench relaxation displacement RMSE. Strict SUN is 0.50%; uniqueness is 80.14%; the post-three-MLIP stable rate is 6.28%. These lower metrics are retained explicitly rather than collapsed into the validity result. See the evaluation directory for exact denominators, source/pool hashes, target checks, and the pinned LeMaterial/LeMat-Bulk revision.

Source

https://github.com/Richardyangfan78/3D_LLM_Diffusion

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