Dataset Viewer
The dataset viewer is not available for this split.
Cannot load the dataset split (in streaming mode) to extract the first rows.
Error code: StreamingRowsError
Exception: ValueError
Message: Dataset 'preds' has length 16058 but expected 663
Traceback: Traceback (most recent call last):
File "/src/services/worker/src/worker/utils.py", line 147, in get_rows_or_raise
return get_rows(
dataset=dataset,
...<4 lines>...
column_names=column_names,
)
File "/src/libs/libcommon/src/libcommon/utils.py", line 272, in decorator
return func(*args, **kwargs)
File "/src/services/worker/src/worker/utils.py", line 127, in get_rows
rows_plus_one = list(itertools.islice(safe_iter(ds, dataset=dataset), rows_max_number + 1))
File "/src/services/worker/src/worker/utils.py", line 483, in safe_iter
yield from ds.decode(False) if ds.features else ds
File "/usr/local/lib/python3.14/site-packages/datasets/iterable_dataset.py", line 2840, in __iter__
for key, example in ex_iterable:
^^^^^^^^^^^
File "/usr/local/lib/python3.14/site-packages/datasets/iterable_dataset.py", line 2373, in __iter__
for key, pa_table in self._iter_arrow():
~~~~~~~~~~~~~~~~^^
File "/usr/local/lib/python3.14/site-packages/datasets/iterable_dataset.py", line 2398, in _iter_arrow
for key, pa_table in self.ex_iterable._iter_arrow():
~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^
File "/usr/local/lib/python3.14/site-packages/datasets/iterable_dataset.py", line 536, in _iter_arrow
for key, pa_table in iterator:
^^^^^^^^
File "/usr/local/lib/python3.14/site-packages/datasets/iterable_dataset.py", line 419, in _iter_arrow
for key, pa_table in self.generate_tables_fn(**gen_kwags):
~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^
File "/usr/local/lib/python3.14/site-packages/datasets/packaged_modules/hdf5/hdf5.py", line 76, in _generate_tables
num_rows = _check_dataset_lengths(h5, self.info.features)
File "/usr/local/lib/python3.14/site-packages/datasets/packaged_modules/hdf5/hdf5.py", line 353, in _check_dataset_lengths
raise ValueError(f"Dataset '{path}' has length {dset.shape[0]} but expected {num_rows}")
ValueError: Dataset 'preds' has length 16058 but expected 663Need help to make the dataset viewer work? Make sure to review how to configure the dataset viewer, and open a discussion for direct support.
MARRI headline model — test-set interpretability export
Per-sample interpretability/diagnostics for the MARRI headline configuration
(dyn ft-rnafm, seed 42 — RNA-FM fine-tuned, RNet2D frozen, dynamic negative
resampling), evaluated on the fixed held-out test split (n=16,058 pairs,
seed 42).
Code and training/evidence logs: https://github.com/GainGod-Xu/MARRI
Files
marri_ft-rnafm_dyn_bs4_seed42_test_results_interpretability.h5— per-sample diagnostics: cross-attention maps (A→B, B→A) at every fusion layer (global and local-window scope), the hybridization-gain (H_ij) matrices, fused logits, opening-penalty terms, and RNet2D per-base structural features, all in fp16 with gzip compression, plus per-sample metadata (sequence IDs, raw sequences, local-window coordinates, gene type/genomic context).marri_ft-rnafm_dyn_bs4_seed42_test_results.h5— the corresponding predictions/probabilities/targets/ROC and PR curves for the same test run (test ROC-AUC 0.7530, PR-AUC 0.7346, Accuracy 0.6830, Precision 0.6663, Recall 0.7255, F1 0.6947, MCC 0.3677).
Generated by re-running the test/export phase against the already-trained checkpoint (no retraining); metrics are identical to the ones reported for this run in the paper.
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