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Split (2)

train

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The dataset generation failed

Error code:   DatasetGenerationError
Exception:    ArrowNotImplementedError
Message:      Cannot write struct type '_format_kwargs' with no child field to Parquet. Consider adding a dummy child field.
Traceback:    Traceback (most recent call last):
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 2011, in _prepare_split_single
                  writer.write_table(table)
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/arrow_writer.py", line 583, in write_table
                  self._build_writer(inferred_schema=pa_table.schema)
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/arrow_writer.py", line 404, in _build_writer
                  self.pa_writer = self._WRITER_CLASS(self.stream, schema)
                File "/src/services/worker/.venv/lib/python3.9/site-packages/pyarrow/parquet/core.py", line 1010, in __init__
                  self.writer = _parquet.ParquetWriter(
                File "pyarrow/_parquet.pyx", line 2157, in pyarrow._parquet.ParquetWriter.__cinit__
                File "pyarrow/error.pxi", line 154, in pyarrow.lib.pyarrow_internal_check_status
                File "pyarrow/error.pxi", line 91, in pyarrow.lib.check_status
              pyarrow.lib.ArrowNotImplementedError: Cannot write struct type '_format_kwargs' with no child field to Parquet. Consider adding a dummy child field.
              
              During handling of the above exception, another exception occurred:
              
              Traceback (most recent call last):
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 2027, in _prepare_split_single
                  num_examples, num_bytes = writer.finalize()
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/arrow_writer.py", line 602, in finalize
                  self._build_writer(self.schema)
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/arrow_writer.py", line 404, in _build_writer
                  self.pa_writer = self._WRITER_CLASS(self.stream, schema)
                File "/src/services/worker/.venv/lib/python3.9/site-packages/pyarrow/parquet/core.py", line 1010, in __init__
                  self.writer = _parquet.ParquetWriter(
                File "pyarrow/_parquet.pyx", line 2157, in pyarrow._parquet.ParquetWriter.__cinit__
                File "pyarrow/error.pxi", line 154, in pyarrow.lib.pyarrow_internal_check_status
                File "pyarrow/error.pxi", line 91, in pyarrow.lib.check_status
              pyarrow.lib.ArrowNotImplementedError: Cannot write struct type '_format_kwargs' with no child field to Parquet. Consider adding a dummy child field.
              
              The above exception was the direct cause of the following exception:
              
              Traceback (most recent call last):
                File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 1529, in compute_config_parquet_and_info_response
                  parquet_operations = convert_to_parquet(builder)
                File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 1154, in convert_to_parquet
                  builder.download_and_prepare(
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1027, in download_and_prepare
                  self._download_and_prepare(
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1122, in _download_and_prepare
                  self._prepare_split(split_generator, **prepare_split_kwargs)
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1882, in _prepare_split
                  for job_id, done, content in self._prepare_split_single(
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 2038, in _prepare_split_single
                  raise DatasetGenerationError("An error occurred while generating the dataset") from e
              datasets.exceptions.DatasetGenerationError: An error occurred while generating the dataset

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_data_files list	_fingerprint string	_format_columns sequence	_format_kwargs dict	_format_type null	_indexes dict	_output_all_columns bool	_split null
[ { "filename": "dataset.arrow" } ]	79f401e9f9402989	[ "feat_compound_iso_smiles", "feat_target_sequence", "id", "target" ]	{}	null	{}	false	null

AutoTrain Dataset for project: enzydg

Dataset Description

This dataset has been automatically processed by AutoTrain for project enzydg.

Languages

The BCP-47 code for the dataset's language is unk.

Dataset Structure

Data Instances

A sample from this dataset looks as follows:

[
  {
    "id": 155,
    "feat_compound_iso_smiles": "CC1(C2CC(=O)C1(C(=O)C2)C)C",
    "feat_target_sequence": "MKQLATPFQEYSQKYENIRLERDGGVLLVTVHTEGKSLVWTSTAHDELAYCFHDIACDRENKVVILTGTGPSFCNEIDFTSFNLGTPHDWDEIIFEGQRLLNNLLSIEVPVIAAVNGPVTNAPEIPVMSDIVLAAESATFQDGPHFPSGIVPGDGAHVVWPHVLGSNRGRYFLLTGQELDARTALDYGAVNEVLSEQELLPRAWELARGIAEKPLLARRYARKVLTRQLRRVMEADLSLGLAHEALAAIDLGMESEQ",
    "target": 13.621903419494629
  },
  {
    "id": 180,
    "feat_compound_iso_smiles": "C1=CC(=CC=C1C2=COC3=C(C2=O)C=CC(=C3)O[C@H]4[C@@H]([C@H]([C@@H]([C@H](O4)CO)O)O)O)O",
    "feat_target_sequence": "MAFPAGFGWAAATAAYQVEGGWDADGKGPCVWDTFTHQGGERVFKNQTGDVACGSYTLWEEDLKCIKQLGLTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFDLPQTLEDQGGWLSEAIIESFDKYAQFCFSTFGDRVKQWITINEANVLSVMSYDLGMFPPGIPHFGTGGYQAAHNLIKAHARSWHSYDSLFRKKQKGMVSLSLFAVWLEPADPNSVSDQEAAKRAITFHLDLFAKPIFIDGDYPEVVKSQIASMSQKQGYPSSRLPEFTEEEKKMIKGTADFFAVQYYTTRLIKYQENKKGELGILQDAEIEFFPDPSWKNVDAIYVVPWGVCKLLKYIKDTYNNPVIYITENGFPQSDPAPLDDTQRWEYFRQTFQELFKAIQLDKVNLQVYCAWSLLDNFEWNQGYSSRFGLFHVDFEDPARPRVPYTSAKEYAKIIRNNGLEAHL",
    "target": 17.67270851135254
  }
]

Dataset Fields

The dataset has the following fields (also called "features"):

{
  "id": "Value(dtype='int64', id=None)",
  "feat_compound_iso_smiles": "Value(dtype='string', id=None)",
  "feat_target_sequence": "Value(dtype='string', id=None)",
  "target": "Value(dtype='float32', id=None)"
}

Dataset Splits

This dataset is split into a train and validation split. The split sizes are as follow:

Split name	Num samples
train	160
valid	44

Downloads last month: 11

Total file size:

210 kB