Datasets:

---

Samzzh

/

leukemia_classifier_project_datasets

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Error code:   DatasetGenerationCastError
Exception:    DatasetGenerationCastError
Message:      An error occurred while generating the dataset

All the data files must have the same columns, but at some point there are 31 new columns ({'Latent_2', 'Latent_10', 'Latent_20', 'Latent_27', 'Latent_29', 'Latent_18', 'Latent_8', 'Latent_25', 'Latent_7', 'Latent_14', 'Latent_11', 'Latent_22', 'Latent_17', 'Latent_26', 'Latent_5', 'Latent_1', 'Latent_21', 'Latent_30', 'Latent_15', 'Latent_3', 'Latent_9', 'Latent_13', 'Latent_6', 'Latent_16', 'Unnamed: 0', 'Latent_12', 'Latent_28', 'Latent_4', 'Latent_23', 'Latent_19', 'Latent_24'}) and 5 missing columns ({'true', 'mlp_v2_pred', 'ensemble_pred', 'mlp_v1_pred', 'xgb_pred'}).

This happened while the csv dataset builder was generating data using

hf://datasets/Samzzh/leukemia_classifier_project_datasets/processed/gene_latent_correlations.csv (at revision e34d5b6b740d54c1c4e424bb761020fc14abc4c7), [/tmp/hf-datasets-cache/medium/datasets/62961037261503-config-parquet-and-info-Samzzh-leukemia_classifie-43b12c06/hub/datasets--Samzzh--leukemia_classifier_project_datasets/snapshots/e34d5b6b740d54c1c4e424bb761020fc14abc4c7/processed/final_predictions.csv (origin=hf://datasets/Samzzh/leukemia_classifier_project_datasets@e34d5b6b740d54c1c4e424bb761020fc14abc4c7/processed/final_predictions.csv), /tmp/hf-datasets-cache/medium/datasets/62961037261503-config-parquet-and-info-Samzzh-leukemia_classifie-43b12c06/hub/datasets--Samzzh--leukemia_classifier_project_datasets/snapshots/e34d5b6b740d54c1c4e424bb761020fc14abc4c7/processed/gene_latent_correlations.csv (origin=hf://datasets/Samzzh/leukemia_classifier_project_datasets@e34d5b6b740d54c1c4e424bb761020fc14abc4c7/processed/gene_latent_correlations.csv), /tmp/hf-datasets-cache/medium/datasets/62961037261503-config-parquet-and-info-Samzzh-leukemia_classifie-43b12c06/hub/datasets--Samzzh--leukemia_classifier_project_datasets/snapshots/e34d5b6b740d54c1c4e424bb761020fc14abc4c7/processed/leukemia_filtered.csv (origin=hf://datasets/Samzzh/leukemia_classifier_project_datasets@e34d5b6b740d54c1c4e424bb761020fc14abc4c7/processed/leukemia_filtered.csv), /tmp/hf-datasets-cache/medium/datasets/62961037261503-config-parquet-and-info-Samzzh-leukemia_classifie-43b12c06/hub/datasets--Samzzh--leukemia_classifier_project_datasets/snapshots/e34d5b6b740d54c1c4e424bb761020fc14abc4c7/processed/leukemia_latent_features.csv (origin=hf://datasets/Samzzh/leukemia_classifier_project_datasets@e34d5b6b740d54c1c4e424bb761020fc14abc4c7/processed/leukemia_latent_features.csv), /tmp/hf-datasets-cache/medium/datasets/62961037261503-config-parquet-and-info-Samzzh-leukemia_classifie-43b12c06/hub/datasets--Samzzh--leukemia_classifier_project_datasets/snapshots/e34d5b6b740d54c1c4e424bb761020fc14abc4c7/processed/leukemia_latent_features_collab.csv (origin=hf://datasets/Samzzh/leukemia_classifier_project_datasets@e34d5b6b740d54c1c4e424bb761020fc14abc4c7/processed/leukemia_latent_features_collab.csv), /tmp/hf-datasets-cache/medium/datasets/62961037261503-config-parquet-and-info-Samzzh-leukemia_classifie-43b12c06/hub/datasets--Samzzh--leukemia_classifier_project_datasets/snapshots/e34d5b6b740d54c1c4e424bb761020fc14abc4c7/processed/leukemia_sample_info.csv (origin=hf://datasets/Samzzh/leukemia_classifier_project_datasets@e34d5b6b740d54c1c4e424bb761020fc14abc4c7/processed/leukemia_sample_info.csv), /tmp/hf-datasets-cache/medium/datasets/62961037261503-config-parquet-and-info-Samzzh-leukemia_classifie-43b12c06/hub/datasets--Samzzh--leukemia_classifier_project_datasets/snapshots/e34d5b6b740d54c1c4e424bb761020fc14abc4c7/processed/lightweight_predictions.csv (origin=hf://datasets/Samzzh/leukemia_classifier_project_datasets@e34d5b6b740d54c1c4e424bb761020fc14abc4c7/processed/lightweight_predictions.csv), /tmp/hf-datasets-cache/medium/datasets/62961037261503-config-parquet-and-info-Samzzh-leukemia_classifie-43b12c06/hub/datasets--Samzzh--leukemia_classifier_project_datasets/snapshots/e34d5b6b740d54c1c4e424bb761020fc14abc4c7/processed/phase3_performance_summary.csv (origin=hf://datasets/Samzzh/leukemia_classifier_project_datasets@e34d5b6b740d54c1c4e424bb761020fc14abc4c7/processed/phase3_performance_summary.csv), /tmp/hf-datasets-cache/medium/datasets/62961037261503-config-parquet-and-info-Samzzh-leukemia_classifie-43b12c06/hub/datasets--Samzzh--leukemia_classifier_project_datasets/snapshots/e34d5b6b740d54c1c4e424bb761020fc14abc4c7/processed/phase3_predictions_64d.csv (origin=hf://datasets/Samzzh/leukemia_classifier_project_datasets@e34d5b6b740d54c1c4e424bb761020fc14abc4c7/processed/phase3_predictions_64d.csv), /tmp/hf-datasets-cache/medium/datasets/62961037261503-config-parquet-and-info-Samzzh-leukemia_classifie-43b12c06/hub/datasets--Samzzh--leukemia_classifier_project_datasets/snapshots/e34d5b6b740d54c1c4e424bb761020fc14abc4c7/processed/tcga_filtered.csv (origin=hf://datasets/Samzzh/leukemia_classifier_project_datasets@e34d5b6b740d54c1c4e424bb761020fc14abc4c7/processed/tcga_filtered.csv), /tmp/hf-datasets-cache/medium/datasets/62961037261503-config-parquet-and-info-Samzzh-leukemia_classifie-43b12c06/hub/datasets--Samzzh--leukemia_classifier_project_datasets/snapshots/e34d5b6b740d54c1c4e424bb761020fc14abc4c7/raw/GSE13159_refinebio_expression.tsv (origin=hf://datasets/Samzzh/leukemia_classifier_project_datasets@e34d5b6b740d54c1c4e424bb761020fc14abc4c7/raw/GSE13159_refinebio_expression.tsv)]

Please either edit the data files to have matching columns, or separate them into different configurations (see docs at https://hf.co/docs/hub/datasets-manual-configuration#multiple-configurations)
Traceback:    Traceback (most recent call last):
                File "/usr/local/lib/python3.12/site-packages/datasets/builder.py", line 1890, in _prepare_split_single
                  writer.write_table(table)
                File "/usr/local/lib/python3.12/site-packages/datasets/arrow_writer.py", line 760, in write_table
                  pa_table = table_cast(pa_table, self._schema)
                             ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
                File "/usr/local/lib/python3.12/site-packages/datasets/table.py", line 2272, in table_cast
                  return cast_table_to_schema(table, schema)
                         ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
                File "/usr/local/lib/python3.12/site-packages/datasets/table.py", line 2218, in cast_table_to_schema
                  raise CastError(
              datasets.table.CastError: Couldn't cast
              Unnamed: 0: string
              Latent_1: double
              Latent_2: double
              Latent_3: double
              Latent_4: double
              Latent_5: double
              Latent_6: double
              Latent_7: double
              Latent_8: double
              Latent_9: double
              Latent_10: double
              Latent_11: double
              Latent_12: double
              Latent_13: double
              Latent_14: double
              Latent_15: double
              Latent_16: double
              Latent_17: double
              Latent_18: double
              Latent_19: double
              Latent_20: double
              Latent_21: double
              Latent_22: double
              Latent_23: double
              Latent_24: double
              Latent_25: double
              Latent_26: double
              Latent_27: double
              Latent_28: double
              Latent_29: double
              Latent_30: double
              -- schema metadata --
              pandas: '{"index_columns": [{"kind": "range", "name": null, "start": 0, "' + 3935
              to
              {'true': Value('string'), 'xgb_pred': Value('string'), 'mlp_v1_pred': Value('string'), 'mlp_v2_pred': Value('string'), 'ensemble_pred': Value('string')}
              because column names don't match
              
              During handling of the above exception, another exception occurred:
              
              Traceback (most recent call last):
                File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 1347, in compute_config_parquet_and_info_response
                  parquet_operations = convert_to_parquet(builder)
                                       ^^^^^^^^^^^^^^^^^^^^^^^^^^^
                File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 980, in convert_to_parquet
                  builder.download_and_prepare(
                File "/usr/local/lib/python3.12/site-packages/datasets/builder.py", line 884, in download_and_prepare
                  self._download_and_prepare(
                File "/usr/local/lib/python3.12/site-packages/datasets/builder.py", line 947, in _download_and_prepare
                  self._prepare_split(split_generator, **prepare_split_kwargs)
                File "/usr/local/lib/python3.12/site-packages/datasets/builder.py", line 1739, in _prepare_split
                  for job_id, done, content in self._prepare_split_single(
                                               ^^^^^^^^^^^^^^^^^^^^^^^^^^^
                File "/usr/local/lib/python3.12/site-packages/datasets/builder.py", line 1892, in _prepare_split_single
                  raise DatasetGenerationCastError.from_cast_error(
              datasets.exceptions.DatasetGenerationCastError: An error occurred while generating the dataset
              
              All the data files must have the same columns, but at some point there are 31 new columns ({'Latent_2', 'Latent_10', 'Latent_20', 'Latent_27', 'Latent_29', 'Latent_18', 'Latent_8', 'Latent_25', 'Latent_7', 'Latent_14', 'Latent_11', 'Latent_22', 'Latent_17', 'Latent_26', 'Latent_5', 'Latent_1', 'Latent_21', 'Latent_30', 'Latent_15', 'Latent_3', 'Latent_9', 'Latent_13', 'Latent_6', 'Latent_16', 'Unnamed: 0', 'Latent_12', 'Latent_28', 'Latent_4', 'Latent_23', 'Latent_19', 'Latent_24'}) and 5 missing columns ({'true', 'mlp_v2_pred', 'ensemble_pred', 'mlp_v1_pred', 'xgb_pred'}).
              
              This happened while the csv dataset builder was generating data using
              
              hf://datasets/Samzzh/leukemia_classifier_project_datasets/processed/gene_latent_correlations.csv (at revision e34d5b6b740d54c1c4e424bb761020fc14abc4c7), [/tmp/hf-datasets-cache/medium/datasets/62961037261503-config-parquet-and-info-Samzzh-leukemia_classifie-43b12c06/hub/datasets--Samzzh--leukemia_classifier_project_datasets/snapshots/e34d5b6b740d54c1c4e424bb761020fc14abc4c7/processed/final_predictions.csv (origin=hf://datasets/Samzzh/leukemia_classifier_project_datasets@e34d5b6b740d54c1c4e424bb761020fc14abc4c7/processed/final_predictions.csv), /tmp/hf-datasets-cache/medium/datasets/62961037261503-config-parquet-and-info-Samzzh-leukemia_classifie-43b12c06/hub/datasets--Samzzh--leukemia_classifier_project_datasets/snapshots/e34d5b6b740d54c1c4e424bb761020fc14abc4c7/processed/gene_latent_correlations.csv (origin=hf://datasets/Samzzh/leukemia_classifier_project_datasets@e34d5b6b740d54c1c4e424bb761020fc14abc4c7/processed/gene_latent_correlations.csv), /tmp/hf-datasets-cache/medium/datasets/62961037261503-config-parquet-and-info-Samzzh-leukemia_classifie-43b12c06/hub/datasets--Samzzh--leukemia_classifier_project_datasets/snapshots/e34d5b6b740d54c1c4e424bb761020fc14abc4c7/processed/leukemia_filtered.csv (origin=hf://datasets/Samzzh/leukemia_classifier_project_datasets@e34d5b6b740d54c1c4e424bb761020fc14abc4c7/processed/leukemia_filtered.csv), /tmp/hf-datasets-cache/medium/datasets/62961037261503-config-parquet-and-info-Samzzh-leukemia_classifie-43b12c06/hub/datasets--Samzzh--leukemia_classifier_project_datasets/snapshots/e34d5b6b740d54c1c4e424bb761020fc14abc4c7/processed/leukemia_latent_features.csv (origin=hf://datasets/Samzzh/leukemia_classifier_project_datasets@e34d5b6b740d54c1c4e424bb761020fc14abc4c7/processed/leukemia_latent_features.csv), /tmp/hf-datasets-cache/medium/datasets/62961037261503-config-parquet-and-info-Samzzh-leukemia_classifie-43b12c06/hub/datasets--Samzzh--leukemia_classifier_project_datasets/snapshots/e34d5b6b740d54c1c4e424bb761020fc14abc4c7/processed/leukemia_latent_features_collab.csv (origin=hf://datasets/Samzzh/leukemia_classifier_project_datasets@e34d5b6b740d54c1c4e424bb761020fc14abc4c7/processed/leukemia_latent_features_collab.csv), /tmp/hf-datasets-cache/medium/datasets/62961037261503-config-parquet-and-info-Samzzh-leukemia_classifie-43b12c06/hub/datasets--Samzzh--leukemia_classifier_project_datasets/snapshots/e34d5b6b740d54c1c4e424bb761020fc14abc4c7/processed/leukemia_sample_info.csv (origin=hf://datasets/Samzzh/leukemia_classifier_project_datasets@e34d5b6b740d54c1c4e424bb761020fc14abc4c7/processed/leukemia_sample_info.csv), /tmp/hf-datasets-cache/medium/datasets/62961037261503-config-parquet-and-info-Samzzh-leukemia_classifie-43b12c06/hub/datasets--Samzzh--leukemia_classifier_project_datasets/snapshots/e34d5b6b740d54c1c4e424bb761020fc14abc4c7/processed/lightweight_predictions.csv (origin=hf://datasets/Samzzh/leukemia_classifier_project_datasets@e34d5b6b740d54c1c4e424bb761020fc14abc4c7/processed/lightweight_predictions.csv), /tmp/hf-datasets-cache/medium/datasets/62961037261503-config-parquet-and-info-Samzzh-leukemia_classifie-43b12c06/hub/datasets--Samzzh--leukemia_classifier_project_datasets/snapshots/e34d5b6b740d54c1c4e424bb761020fc14abc4c7/processed/phase3_performance_summary.csv (origin=hf://datasets/Samzzh/leukemia_classifier_project_datasets@e34d5b6b740d54c1c4e424bb761020fc14abc4c7/processed/phase3_performance_summary.csv), /tmp/hf-datasets-cache/medium/datasets/62961037261503-config-parquet-and-info-Samzzh-leukemia_classifie-43b12c06/hub/datasets--Samzzh--leukemia_classifier_project_datasets/snapshots/e34d5b6b740d54c1c4e424bb761020fc14abc4c7/processed/phase3_predictions_64d.csv (origin=hf://datasets/Samzzh/leukemia_classifier_project_datasets@e34d5b6b740d54c1c4e424bb761020fc14abc4c7/processed/phase3_predictions_64d.csv), /tmp/hf-datasets-cache/medium/datasets/62961037261503-config-parquet-and-info-Samzzh-leukemia_classifie-43b12c06/hub/datasets--Samzzh--leukemia_classifier_project_datasets/snapshots/e34d5b6b740d54c1c4e424bb761020fc14abc4c7/processed/tcga_filtered.csv (origin=hf://datasets/Samzzh/leukemia_classifier_project_datasets@e34d5b6b740d54c1c4e424bb761020fc14abc4c7/processed/tcga_filtered.csv), /tmp/hf-datasets-cache/medium/datasets/62961037261503-config-parquet-and-info-Samzzh-leukemia_classifie-43b12c06/hub/datasets--Samzzh--leukemia_classifier_project_datasets/snapshots/e34d5b6b740d54c1c4e424bb761020fc14abc4c7/raw/GSE13159_refinebio_expression.tsv (origin=hf://datasets/Samzzh/leukemia_classifier_project_datasets@e34d5b6b740d54c1c4e424bb761020fc14abc4c7/raw/GSE13159_refinebio_expression.tsv)]
              
              Please either edit the data files to have matching columns, or separate them into different configurations (see docs at https://hf.co/docs/hub/datasets-manual-configuration#multiple-configurations)