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The dataset generation failed because of a cast error
Error code:   DatasetGenerationCastError
Exception:    DatasetGenerationCastError
Message:      An error occurred while generating the dataset

All the data files must have the same columns, but at some point there are 2 new columns ({'function_code', 'class'}) and 2 missing columns ({'vulnerable_function_source', 'label'}).

This happened while the csv dataset builder was generating data using

hf://datasets/S-AIR-L/PyCode-Vul/PyCode_Vul test-set.csv (at revision 7194453958d94a8102aec86e925952eb2c6e73d3), [/tmp/hf-datasets-cache/medium/datasets/40362150508700-config-parquet-and-info-S-AIR-L-PyCode-Vul-2954e457/hub/datasets--S-AIR-L--PyCode-Vul/snapshots/7194453958d94a8102aec86e925952eb2c6e73d3/PyCode_Vul test-set.csv (origin=hf://datasets/S-AIR-L/PyCode-Vul@7194453958d94a8102aec86e925952eb2c6e73d3/PyCode_Vul test-set.csv)]

Please either edit the data files to have matching columns, or separate them into different configurations (see docs at https://hf.co/docs/hub/datasets-manual-configuration#multiple-configurations)
Traceback:    Traceback (most recent call last):
                File "/usr/local/lib/python3.12/site-packages/datasets/builder.py", line 1800, in _prepare_split_single
                  writer.write_table(table)
                File "/usr/local/lib/python3.12/site-packages/datasets/arrow_writer.py", line 765, in write_table
                  self._write_table(pa_table, writer_batch_size=writer_batch_size)
                File "/usr/local/lib/python3.12/site-packages/datasets/arrow_writer.py", line 773, in _write_table
                  pa_table = table_cast(pa_table, self._schema)
                             ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
                File "/usr/local/lib/python3.12/site-packages/datasets/table.py", line 2281, in table_cast
                  return cast_table_to_schema(table, schema)
                         ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
                File "/usr/local/lib/python3.12/site-packages/datasets/table.py", line 2227, in cast_table_to_schema
                  raise CastError(
              datasets.table.CastError: Couldn't cast
              __source_file: string
              cve_ids: string
              cwe_ids: string
              file_path: string
              class: int64
              patched_function_source: string
              predicted_cwe_ids: string
              repo: string
              sha: string
              function_code: string
              -- schema metadata --
              pandas: '{"index_columns": [{"kind": "range", "name": null, "start": 0, "' + 1461
              to
              {'__source_file': Value('string'), 'cve_ids': Value('string'), 'cwe_ids': Value('string'), 'file_path': Value('string'), 'label': Value('int64'), 'patched_function_source': Value('string'), 'predicted_cwe_ids': Value('string'), 'repo': Value('string'), 'sha': Value('string'), 'vulnerable_function_source': Value('string')}
              because column names don't match
              
              During handling of the above exception, another exception occurred:
              
              Traceback (most recent call last):
                File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 1347, in compute_config_parquet_and_info_response
                  parquet_operations = convert_to_parquet(builder)
                                       ^^^^^^^^^^^^^^^^^^^^^^^^^^^
                File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 980, in convert_to_parquet
                  builder.download_and_prepare(
                File "/usr/local/lib/python3.12/site-packages/datasets/builder.py", line 882, in download_and_prepare
                  self._download_and_prepare(
                File "/usr/local/lib/python3.12/site-packages/datasets/builder.py", line 943, in _download_and_prepare
                  self._prepare_split(split_generator, **prepare_split_kwargs)
                File "/usr/local/lib/python3.12/site-packages/datasets/builder.py", line 1646, in _prepare_split
                  for job_id, done, content in self._prepare_split_single(
                                               ^^^^^^^^^^^^^^^^^^^^^^^^^^^
                File "/usr/local/lib/python3.12/site-packages/datasets/builder.py", line 1802, in _prepare_split_single
                  raise DatasetGenerationCastError.from_cast_error(
              datasets.exceptions.DatasetGenerationCastError: An error occurred while generating the dataset
              
              All the data files must have the same columns, but at some point there are 2 new columns ({'function_code', 'class'}) and 2 missing columns ({'vulnerable_function_source', 'label'}).
              
              This happened while the csv dataset builder was generating data using
              
              hf://datasets/S-AIR-L/PyCode-Vul/PyCode_Vul test-set.csv (at revision 7194453958d94a8102aec86e925952eb2c6e73d3), [/tmp/hf-datasets-cache/medium/datasets/40362150508700-config-parquet-and-info-S-AIR-L-PyCode-Vul-2954e457/hub/datasets--S-AIR-L--PyCode-Vul/snapshots/7194453958d94a8102aec86e925952eb2c6e73d3/PyCode_Vul test-set.csv (origin=hf://datasets/S-AIR-L/PyCode-Vul@7194453958d94a8102aec86e925952eb2c6e73d3/PyCode_Vul test-set.csv)]
              
              Please either edit the data files to have matching columns, or separate them into different configurations (see docs at https://hf.co/docs/hub/datasets-manual-configuration#multiple-configurations)

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__source_file
string
cve_ids
string
cwe_ids
string
file_path
string
label
int64
patched_function_source
string
predicted_cwe_ids
string
repo
string
sha
string
vulnerable_function_source
string
null
UNKNOWN
UNKNOWN
tests/store/artifact/test_azure_blob_artifact_repo.py
1
def test_list_artifacts_empty(mock_client): repo = AzureBlobArtifactRepository(TEST_URI, mock_client) mock_client.get_container_client().walk_blobs.return_value = MockBlobList([]) assert repo.list_artifacts() == []
CWE-703
mlflow/mlflow
04708a9e52774e23e17bf73d6221be0758177a68
def test_list_artifacts_empty(mock_client): repo = AzureBlobArtifactRepository(TEST_URI, mock_client) mock_client.get_container_client().walk_blobs.return_value = MockBlobList([]) assert repo.list_artifacts() == []
null
UNKNOWN
UNKNOWN
tests/test_config.py
1
def test_config_from_envvar_missing(monkeypatch): monkeypatch.setattr("os.environ", {"FOO_SETTINGS": "missing.cfg"}) with pytest.raises(IOError) as e: app = flask.Flask(__name__) app.config.from_envvar("FOO_SETTINGS") msg = str(e.value) assert msg.startswith( "[Errno 2] Unable to...
CWE-703
pallets/flask
d4b688bd035b9704b3168b28fed39c8fcfe3b997
def test_config_from_envvar_missing(monkeypatch): monkeypatch.setattr("os.environ", {"FOO_SETTINGS": "missing.cfg"}) with pytest.raises(IOError) as e: app = flask.Flask(__name__) app.config.from_envvar("FOO_SETTINGS") msg = str(e.value) assert msg.startswith( "[Errno 2] Unable to...
null
UNKNOWN
UNKNOWN
django/core/management/templates.py
1
def handle(self, app_or_project, name, target=None, **options): self.app_or_project = app_or_project self.paths_to_remove = [] self.verbosity = int(options.get('verbosity')) self.validate_name(name, app_or_project) # if some directory is given, make sure it's nicely expanded ...
CWE-79
django/django
9893fa12b735f3f47b35d4063d86dddf3145cb25
def handle(self, app_or_project, name, target=None, **options): self.app_or_project = app_or_project self.paths_to_remove = [] self.verbosity = int(options.get('verbosity')) # If it's not a valid directory name. if not re.search(r'^[_a-zA-Z]\w*$', name): # Provide a ...
functions_for_w3af_with_cwe.csv
UNKNOWN
UNKNOWN
lib/techniques/inband/union/test.py
0
def __unionTestByCharBruteforce(comment): """ This method tests if the target url is affected by an inband SQL injection vulnerability. The test is done up to 50 columns on the target database table """ query = agent.prefixQuery("UNION ALL SELECT %s" % conf.uChar) for count in range(conf.u...
null
andresriancho/w3af
c23126547e7f087a35d04fb5adb5d38ce39a4b9c
def __unionTestByCharBruteforce(comment): """ This method tests if the target url is affected by an inband SQL injection vulnerability. The test is done up to 50 columns on the target database table """ query = agent.prefixQuery("UNION ALL SELECT %s" % conf.uChar) for count in range(1, con...
functions_for_mlflow_with_cwe.csv
UNKNOWN
UNKNOWN
mlflow/keras.py
0
def save_model(keras_model, path, conda_env=None, mlflow_model=Model()): """ Save a Keras model to a path on the local file system. :param keras_model: Keras model to be saved. :param path: Local path where the model is to be saved. :param conda_env: Either a dictionary representation of a Conda en...
null
mlflow/mlflow
fd14ec54114f967f28b8e5c3919985e3164f3a4c
def save_model(keras_model, path, conda_env=None, mlflow_model=Model()): """ Save a Keras model to a path on the local file system. :param keras_model: Keras model to be saved. :param path: Local path where the model is to be saved. :param conda_env: Either a dictionary representation of a Conda en...
functions_for_salt_with_cwe.csv
UNKNOWN
UNKNOWN
salt/modules/freebsd_sysctl.py
0
def show(config_file=False): ''' Return a list of sysctl parameters for this minion CLI Example: .. code-block:: bash salt '*' sysctl.show ''' roots = ( 'compat', 'debug', 'dev', 'hptmv', 'hw', 'kern', 'machdep', 'net', ...
null
saltstack/salt
a47fa8880fc5f7896979301213d13a80b8bfc2ee
def show(config_file=False): ''' Return a list of sysctl parameters for this minion CLI Example: .. code-block:: bash salt '*' sysctl.show ''' roots = ( 'compat', 'debug', 'dev', 'hptmv', 'hw', 'kern', 'machdep', 'net', ...
null
UNKNOWN
UNKNOWN
tests/jobs/test_local_task_job.py
1
def test_localtaskjob_heartbeat(self, dag_maker): session = settings.Session() with dag_maker('test_localtaskjob_heartbeat'): op1 = DummyOperator(task_id='op1') dr = dag_maker.create_dagrun() ti = dr.get_task_instance(task_id=op1.task_id, session=session) ti.state = ...
CWE-703
apache/airflow
d2eab1de0c3ee93e5e1c7830ffcfdb534657fc21
def test_localtaskjob_heartbeat(self, dag_maker): session = settings.Session() with dag_maker('test_localtaskjob_heartbeat'): op1 = DummyOperator(task_id='op1') dr = dag_maker.create_dagrun() ti = dr.get_task_instance(task_id=op1.task_id, session=session) ti.state = ...
null
UNKNOWN
UNKNOWN
salt/utils/templates.py
1
def render_tmpl(tmplsrc, from_str=False, to_str=False, context=None, tmplpath=None, **kws): if context is None: context = {} # Alias cmd.run to cmd.shell to make python_shell=True the defaul...
CWE-703
saltstack/salt
3ad69c8fabe76e45426950c99b6e43b28340f2f9
def render_tmpl(tmplsrc, from_str=False, to_str=False, context=None, tmplpath=None, **kws): if context is None: context = {} # Alias cmd.run to cmd.shell to make python_shell=True the defaul...
null
UNKNOWN
UNKNOWN
tests/operators/test_trigger_dagrun.py
1
def assert_extra_link(self, triggered_dag_run, triggering_task, session): """ Asserts whether the correct extra links url will be created. Specifically it tests whether the correct dag id and date are passed to the method which constructs the final url. Note: We can't run that m...
CWE-703
apache/airflow
8b3c24f273d5ee818ded1cb8bc29bb9b7e44b625
def assert_extra_link(self, triggered_dag_run, triggering_task, session): """ Asserts whether the correct extra links url will be created. Specifically it tests whether the correct dag id and date are passed to the method which constructs the final url. Note: We can't run that m...
null
UNKNOWN
UNKNOWN
providers/microsoft/azure/tests/unit/microsoft/azure/operators/test_msgraph.py
1
def test_execute_with_new_result_processor_signature(self): users = load_json_from_resources(dirname(__file__), "..", "resources", "users.json") next_users = load_json_from_resources(dirname(__file__), "..", "resources", "next_users.json") response = mock_json_response(200, users, next_users) ...
CWE-703
apache/airflow
b835219e1ee723bc24b914e949e409e3cd785715
def test_execute_with_new_result_processor_signature(self): users = load_json_from_resources(dirname(__file__), "..", "resources", "users.json") next_users = load_json_from_resources(dirname(__file__), "..", "resources", "next_users.json") response = mock_json_response(200, users, next_users) ...
null
UNKNOWN
UNKNOWN
django/contrib/admin/options.py
1
def change_view(self, request, object_id, extra_context=None): "The 'change' admin view for this model." model = self.model opts = model._meta try: obj = self.queryset(request).get(pk=object_id) except model.DoesNotExist: # Don't raise Http404 just yet, b...
CWE-79
django/django
906f55bf0975e6aa4eb63f4ca71e54baff200bf8
def change_view(self, request, object_id, extra_context=None): "The 'change' admin view for this model." model = self.model opts = model._meta try: obj = model._default_manager.get(pk=object_id) except model.DoesNotExist: # Don't raise Http404 just yet, b...
null
UNKNOWN
UNKNOWN
lib/core/update.py
1
def update(): if not conf.updateAll: return success = False if TYPE == "pip": infoMsg = "updating sqlmap to the latest stable version from the " infoMsg += "PyPI repository" logger.info(infoMsg) debugMsg = "sqlmap will try to update itself using 'pip' command" ...
CWE-78, CWE-703
sqlmapproject/sqlmap
df4293473d2fb6e887e31522cab5aff95e201581
def update(): if not conf.updateAll: return success = False if TYPE == "pip": infoMsg = "updating sqlmap to the latest stable version from the " infoMsg += "PyPI repository" logger.info(infoMsg) debugMsg = "sqlmap will try to update itself using 'pip' command" ...
functions_for_django_with_cwe.csv
UNKNOWN
UNKNOWN
django/db/models/sql/compiler.py
0
def as_sql(self, with_limits=True, with_col_aliases=False): """ Create the SQL for this query. Return the SQL string and list of parameters. If 'with_limits' is False, any limit/offset information is not included in the query. """ refcounts_before = self.query.al...
CWE-Unknown
django/django
db7d7901eeacf37f0a6f124e3733c4f121a23e76
def as_sql(self, with_limits=True, with_col_aliases=False): """ Create the SQL for this query. Return the SQL string and list of parameters. If 'with_limits' is False, any limit/offset information is not included in the query. """ refcounts_before = self.query.al...
null
UNKNOWN
UNKNOWN
django/contrib/admin/views/decorators.py
1
def staff_member_required(view_func): """ Decorator for views that checks that the user is logged in and is a staff member, displaying the login page if necessary. """ def _checklogin(request, *args, **kwargs): if request.user.is_staff: # The user is valid. Continue to the admin ...
CWE-703
django/django
933b9e8de7cfae0a271283c11cccbb9897e30a46
def staff_member_required(view_func): """ Decorator for views that checks that the user is logged in and is a staff member, displaying the login page if necessary. """ def _checklogin(request, *args, **kwargs): if request.user.is_authenticated() and request.user.is_staff: # The u...
functions_for_w3af_with_cwe.csv
UNKNOWN
UNKNOWN
plugins/audit/fileUpload.py
0
def _get_files( self ): ''' If the extension is in the templates dir, open it and return the handler. If the extension aint in the templates dir, create a file with random content, open it and return the handler. @return: A list of open files. ''' result = [] # A...
null
andresriancho/w3af
068e2ed8efdad2aed80560c1c979b1bd2d0b3648
def _get_files( self ): ''' If the extension is in the templates dir, open it and return the handler. If the extension aint in the templates dir, create a file with random content, open it and return the handler. @return: A list of open files. ''' result = [] # A...
null
UNKNOWN
UNKNOWN
extra/vulnserver/vulnserver.py
1
def do_REQUEST(self): path, query = self.path.split('?', 1) if '?' in self.path else (self.path, "") params = {} if query: params.update(parse_qs(query)) if "<script>" in unquote_plus(query): self.send_response(INTERNAL_SERVER_ERROR) self...
CWE-89
sqlmapproject/sqlmap
1c179674d84d53539645c839f6a592b65444c4ff
def do_REQUEST(self): path, query = self.path.split('?', 1) if '?' in self.path else (self.path, "") params = {} if query: params.update(parse_qs(query)) if "<script>" in unquote_plus(query): self.send_response(INTERNAL_SERVER_ERROR) self...
functions_for_tornado_with_cwe.csv
UNKNOWN
UNKNOWN
tornado/auth.py
0
def get_authenticated_user(self, redirect_uri, client_id, client_secret, code, callback, extra_fields=None): """Handles the login for the Facebook user, returning a user object. Example usage: .. testcode:: class FacebookGraphLoginHandler(tornado.web...
CWE-Unknown
tornadoweb/tornado
0a706fa666da91162466ae0d0d79d6dbfe923216
def get_authenticated_user(self, redirect_uri, client_id, client_secret, code, callback, extra_fields=None): """Handles the login for the Facebook user, returning a user object. Example usage: .. testcode:: class FacebookGraphLoginHandler(tornado.web...
null
UNKNOWN
UNKNOWN
django/core/management/templates.py
1
def handle(self, app_or_project, name, target=None, **options): self.app_or_project = app_or_project self.a_or_an = "an" if app_or_project == "app" else "a" self.paths_to_remove = [] self.verbosity = options["verbosity"] self.validate_name(name) # if some directory is g...
CWE-79
django/django
58cc91275a68bb42780cf0e663dad9ecf49039de
def handle(self, app_or_project, name, target=None, **options): self.app_or_project = app_or_project self.a_or_an = "an" if app_or_project == "app" else "a" self.paths_to_remove = [] self.verbosity = options["verbosity"] self.validate_name(name) # if some directory is g...
functions_for_volatility_with_cwe.csv
UNKNOWN
UNKNOWN
volatility/plugins/addrspaces/intel.py
0
def read_long_phys(self, addr): ''' Returns an unsigned 32-bit integer from the address addr in physical memory. If unable to read from that location, returns None. ''' try: string = self.base.read(addr, 4) except IOError: string = None if ...
null
volatilityfoundation/volatility
4bf541f12b99128cb77c377e30d98a17be8a4165
def read_long_phys(self, addr): ''' Returns an unsigned 32-bit integer from the address addr in physical memory. If unable to read from that location, returns None. ''' try: string = self.base.read(addr, 4) except IOError: string = None if ...
functions_for_django_with_cwe.csv
UNKNOWN
UNKNOWN
django/db/models/fields/files.py
0
def _check_image_library_installed(self): try: from PIL import Image # NOQA except ImportError: return [ checks.Error( 'Cannot use ImageField because Pillow is not installed.', hint=('Get Pillow at https://pypi.org/project/...
CWE-Unknown
django/django
b98fa241ddbb22507cb63886f697d25f43197cba
def _check_image_library_installed(self): try: from PIL import Image # NOQA except ImportError: return [ checks.Error( 'Cannot use ImageField because Pillow is not installed.', hint=('Get Pillow at https://pypi.python.org/p...
functions_for_mlflow_with_cwe.csv
UNKNOWN
UNKNOWN
mlflow/langchain/api_request_parallel_processor.py
0
def process_api_requests( lc_model, requests: Optional[List[Union[Any, Dict[str, Any]]]] = None, max_workers: int = 10, callback_handlers: Optional[List[BaseCallbackHandler]] = None, convert_chat_responses: bool = False, params: Optional[Dict[str, Any]] = None, ): """ Processes API reque...
null
mlflow/mlflow
03df4a99f60bc3a76295c9acbd85e871f2de22b9
def process_api_requests( lc_model, requests: Optional[List[Union[Any, Dict[str, Any]]]] = None, max_workers: int = 10, callback_handlers: Optional[List[BaseCallbackHandler]] = None, convert_chat_responses: bool = False, params: Optional[Dict[str, Any]] = None, ): """ Processes API reque...
functions_for_salt_with_cwe.csv
UNKNOWN
UNKNOWN
salt/modules/opkg.py
0
def del_repo(repo, **kwargs): # pylint: disable=unused-argument ''' Delete a repo from ``/etc/opkg/*.conf`` If the file does not contain any other repo configuration, the file itself will be deleted. CLI Examples: .. code-block:: bash salt '*' pkg.del_repo repo ''' refresh =...
null
saltstack/salt
3a3114d819093a0074c5e73ae5dffc3300201f08
def del_repo(repo, **kwargs): # pylint: disable=unused-argument ''' Delete a repo from ``/etc/opkg/*.conf`` If the file does not contain any other repo configuration, the file itself will be deleted. CLI Examples: .. code-block:: bash salt '*' pkg.del_repo repo ''' refresh =...
functions_for_sqlmap_with_cwe.csv
UNKNOWN
UNKNOWN
plugins/generic/syntax.py
0
def _escape(expression, quote=True, escaper=None): retVal = expression if quote: for item in re.findall(r"'[^']*'+", expression, re.S): retVal = retVal.replace(item, escaper(item[1:-1])) else: retVal = escaper(expression) return retVal
null
sqlmapproject/sqlmap
65c55a6a4920d67b10d705909864124776d3a2dc
def _escape(expression, quote=True, escaper=None): retVal = expression if quote: for item in re.findall(r"'[^']+'", expression, re.S): retVal = retVal.replace(item, escaper(item[1:-1])) else: retVal = escaper(expression) return retVal
functions_for_tornado_with_cwe.csv
UNKNOWN
UNKNOWN
maint/scripts/custom_fixers/fix_future_imports.py
0
def finish_tree(self, tree, filename): if self.found_future_import: return if not isinstance(tree, pytree.Node): # Empty files (usually __init__.py) show up as a single Leaf # instead of a Node, so leave them alone return first_stmt = tree.children...
CWE-Unknown
tornadoweb/tornado
376cfc2102621b42fcf1f419b5260b33aa204c09
def finish_tree(self, tree, filename): if self.found_future_import: return if not isinstance(tree, pytree.Node): # Empty files (usually __init__.py) show up as a single Leaf # instead of a Node, so leave them alone return first_stmt = tree.children...
null
UNKNOWN
UNKNOWN
tests/providers/google/cloud/operators/test_bigquery.py
1
def test_execute_reattach(self, mock_hook): job_id = "123456" hash_ = "hash" real_job_id = f"{job_id}_{hash_}" configuration = { "query": { "query": "SELECT * FROM any", "useLegacySql": False, } } mock_hook.return_...
CWE-703
apache/airflow
c29eeb18ec0f4ba260775f71968e5d75291b208f
def test_execute_reattach(self, mock_hook): job_id = "123456" hash_ = "hash" real_job_id = f"{job_id}_{hash_}" configuration = { "query": { "query": "SELECT * FROM any", "useLegacySql": False, } } mock_hook.return_...
functions_for_bandit_with_cwe.csv
UNKNOWN
UNKNOWN
tests/functional/test_functional.py
0
def test_host_key_verification(self): """Test for ignoring host key verification.""" expect = { "SEVERITY": {"UNDEFINED": 0, "LOW": 0, "MEDIUM": 0, "HIGH": 4}, "CONFIDENCE": {"UNDEFINED": 0, "LOW": 0, "MEDIUM": 4, "HIGH": 0}, } self.check_example("no_host_key_veri...
UNKNOWN
PyCQA/bandit
6969489ff711a1762bd44d00eaaba75f0c7102f6
def test_host_key_verification(self): """Test for ignoring host key verification.""" expect = { "SEVERITY": {"UNDEFINED": 0, "LOW": 0, "MEDIUM": 0, "HIGH": 2}, "CONFIDENCE": {"UNDEFINED": 0, "LOW": 0, "MEDIUM": 2, "HIGH": 0}, } self.check_example("no_host_key_veri...
null
UNKNOWN
UNKNOWN
tests/executors/test_base_executor.py
1
def test_trigger_running_tasks(can_try_mock, dag_maker, can_try_num, change_state_num, second_exec): can_try_mock.side_effect = [True for _ in range(can_try_num)] + [False] executor, dagrun = setup_trigger_tasks(dag_maker) open_slots = 100 executor.trigger_tasks(open_slots) expected_calls = len(dagr...
CWE-703
apache/airflow
9721e0b82d6102847b840955e8351cce06d4184a
def test_trigger_running_tasks(can_try_mock, dag_maker, can_try_num, change_state_num, second_exec): can_try_mock.side_effect = [True for _ in range(can_try_num)] + [False] executor, dagrun = setup_trigger_tasks(dag_maker) open_slots = 100 executor.trigger_tasks(open_slots) expected_calls = len(dagr...
functions_for_airflow_with_cwe.csv
UNKNOWN
UNKNOWN
airflow/providers/apache/spark/hooks/spark_sql.py
0
def __init__( self, sql: str, conf: Optional[str] = None, conn_id: str = default_conn_name, total_executor_cores: Optional[int] = None, executor_cores: Optional[int] = None, executor_memory: Optional[str] = None, keytab: Optional[str] = None, princ...
CWE-Unknown
apache/airflow
485ff6cc64d8f6a15d8d6a0be50661fe6d04b2d9
def __init__( self, sql: str, conf: Optional[str] = None, conn_id: str = default_conn_name, total_executor_cores: Optional[int] = None, executor_cores: Optional[int] = None, executor_memory: Optional[str] = None, keytab: Optional[str] = None, princ...
functions_for_bandit_with_cwe.csv
UNKNOWN
UNKNOWN
tests/unit/formatters/test_csv.py
0
def setUp(self): super(CsvFormatterTests, self).setUp() conf = config.BanditConfig() self.manager = manager.BanditManager(conf, 'file') (tmp_fd, self.tmp_fname) = tempfile.mkstemp() self.context = {'filename': self.tmp_fname, 'lineno': 4, ...
UNKNOWN
PyCQA/bandit
682c38b26854ecab96001adce25ebfe8d794ec16
def setUp(self): super(CsvFormatterTests, self).setUp() conf = config.BanditConfig() self.manager = manager.BanditManager(conf, 'file') (tmp_fd, self.tmp_fname) = tempfile.mkstemp() self.context = {'filename': self.tmp_fname, 'lineno': 4, ...
null
UNKNOWN
UNKNOWN
tests/pytests/integration/states/test_file.py
1
def test_contents_pillar_with_pillar_list(salt_master, salt_call_cli, tmp_path): """ This tests for any regressions for this issue: https://github.com/saltstack/salt/issues/30934 """ target_path = tmp_path / "add-contents-pillar-target.txt" sls_name = "file-contents-pillar" sls_contents = ""...
CWE-703
saltstack/salt
9d335ba4ec20f89109b71753c0567e716795e755
def test_contents_pillar_with_pillar_list(salt_master, salt_call_cli, tmp_path): """ This tests for any regressions for this issue: https://github.com/saltstack/salt/issues/30934 """ target_path = tmp_path / "add-contents-pillar-target.txt" sls_name = "file-contents-pillar" sls_contents = ""...
null
UNKNOWN
UNKNOWN
tests/providers/atlassian/jira/operators/test_jira.py
1
def test_operator_init_with_optional_args(self): jira_operator = JiraOperator(task_id="jira_list_issue_types", jira_method="issue_types") assert jira_operator.jira_method_args == {} assert jira_operator.result_processor is None assert jira_operator.get_jira_resource_method is None
CWE-703
apache/airflow
ab8c9ec2545caefb232d8e979b18b4c8c8ad3563
def test_operator_init_with_optional_args(self): jira_operator = JiraOperator(task_id="jira_list_issue_types", jira_method="issue_types") assert jira_operator.jira_method_args == {} assert jira_operator.result_processor is None assert jira_operator.get_jira_resource_method is None
null
UNKNOWN
UNKNOWN
tests/test_basic.py
1
def test_response_type_errors(): app = flask.Flask(__name__) app.testing = True @app.route("/none") def from_none(): pass @app.route("/small_tuple") def from_small_tuple(): return ("Hello",) @app.route("/large_tuple") def from_large_tuple(): return "Hello", 234...
CWE-703
pallets/flask
8bb71852849907d1b67ba7514cf1812348e11b44
def test_response_type_errors(): app = flask.Flask(__name__) app.testing = True @app.route("/none") def from_none(): pass @app.route("/small_tuple") def from_small_tuple(): return ("Hello",) @app.route("/large_tuple") def from_large_tuple(): return "Hello", 234...
null
UNKNOWN
UNKNOWN
lib/core/dump.py
1
def dbTableValues(self, tableValues): replication = None rtable = None dumpFP = None appendToFile = False warnFile = False if tableValues is None: return db = tableValues["__infos__"]["db"] if not db: db = "All" table = ta...
CWE-327
sqlmapproject/sqlmap
6aa4d9bdf1e71932ad0756ad1136aa93c73cd681
def dbTableValues(self, tableValues): replication = None rtable = None dumpFP = None appendToFile = False warnFile = False if tableValues is None: return db = tableValues["__infos__"]["db"] if not db: db = "All" table = ta...
null
UNKNOWN
UNKNOWN
airflow-core/tests/unit/utils/test_log_handlers.py
1
def test_file_task_handler_when_ti_value_is_invalid(self, dag_maker): def task_callable(ti): ti.log.info("test") with dag_maker("dag_for_testing_file_task_handler", schedule=None): task = PythonOperator( task_id="task_for_testing_file_log_handler", ...
CWE-703
apache/airflow
76e9e78dadd2f393bf32d292e434ec93f981be3d
def test_file_task_handler_when_ti_value_is_invalid(self, dag_maker): def task_callable(ti): ti.log.info("test") with dag_maker("dag_for_testing_file_task_handler", schedule=None): task = PythonOperator( task_id="task_for_testing_file_log_handler", ...
null
UNKNOWN
UNKNOWN
tests/tracking/test_tracking.py
1
def test_create_experiment(): with pytest.raises(TypeError): tracking.create_experiment() with pytest.raises(Exception): tracking.create_experiment(None) with pytest.raises(Exception): tracking.create_experiment("") with temp_directory() as tmp_dir, mock.patch("mlflow.tracking...
CWE-330, CWE-703
mlflow/mlflow
a4787a3d0df9d1694993ac01d744650668d01140
def test_create_experiment(): with pytest.raises(TypeError): tracking.create_experiment() with pytest.raises(Exception): tracking.create_experiment(None) with pytest.raises(Exception): tracking.create_experiment("") with temp_directory() as tmp_dir, mock.patch("mlflow.tracking...
null
UNKNOWN
UNKNOWN
lib/utils/hash.py
1
def wordpress_passwd(password, salt, count, prefix, **kwargs): """ Reference(s): https://web.archive.org/web/20120219120128/packetstormsecurity.org/files/74448/phpassbrute.py.txt http://scriptserver.mainframe8.com/wordpress_password_hasher.php >>> wordpress_passwd(password='testpass', salt=...
CWE-259
sqlmapproject/sqlmap
459130196a484222b731d2fb893cd442a3fa46f9
def wordpress_passwd(password, salt, count, prefix, **kwargs): """ Reference(s): http://packetstormsecurity.org/files/74448/phpassbrute.py.txt http://scriptserver.mainframe8.com/wordpress_password_hasher.php >>> wordpress_passwd(password='testpass', salt='aD9ZLmkp', count=2048, prefix='$P$9...
null
UNKNOWN
UNKNOWN
salt/client/api.py
1
def create_token(self, creds): ''' Create token with creds. Token authorizes salt access if successful authentication with the credentials in creds. creds format is as follows: { 'username': 'namestring', 'password': 'passwordstring', ...
CWE-259
saltstack/salt
3ad69c8fabe76e45426950c99b6e43b28340f2f9
def create_token(self, creds): ''' Create token with creds. Token authorizes salt access if successful authentication with the credentials in creds. creds format is as follows: { 'username': 'namestring', 'password': 'passwordstring', ...
functions_for_airflow_with_cwe.csv
UNKNOWN
UNKNOWN
airflow/models/dag.py
0
def deactivate_deleted_dags( cls, alive_dag_filelocs: Container[str], processor_subdir: str, session: Session = NEW_SESSION, ) -> None: """ Set ``is_active=False`` on the DAGs for which the DAG files have been removed. :param alive_dag_filelocs: file paths of...
CWE-Unknown
apache/airflow
f44a3246d127a1ad37b1c80035afe00db7785c8c
def deactivate_deleted_dags( cls, alive_dag_filelocs: Container[str], session: Session = NEW_SESSION, ) -> None: """ Set ``is_active=False`` on the DAGs for which the DAG files have been removed. :param alive_dag_filelocs: file paths of alive DAGs :param sess...
End of preview.

PyCode-Vul: A Benchmark Dataset for Code-Level Vulnerability Detection and Analysis

PyCode-Vul is a real-world Python vulnerability dataset accepted at IEEE BigData 2025. The dataset was created by mining security-related commits from widely used Python GitHub repositories, extracting changed files, identifying changed lines, recovering before/after code, validating Python functions through AST parsing, applying CWE mapping, and removing duplicate samples.

The dataset is designed for code-level vulnerability detection, vulnerability classification, and empirical evaluation of code pre-trained models.


Dataset Construction Pipeline

The following figure summarizes the PyCode-Vul dataset construction process, including repository mining, commit filtering, diff/hunk extraction, before/after code extraction, Python code filtering, AST validation, CWE mapping, Bandit-based heuristic analysis, duplication checking, and final dataset creation.

View Dataset Construction Pipeline Figure


Dataset Sources

PyCode-Vul was collected from 15 real-world Python repositories covering web frameworks, security tools, DevOps automation, machine learning lifecycle management, data workflow systems, networking libraries, and digital forensics tools.

Repository Samples Purpose Real-World Use
Sqlmap 1000 SQL injection testing tool Widely used in penetration testing and security research
Django 835 Web framework Used for scalable production web applications
Salt 1006 Automation and configuration management Commonly used in DevOps and infrastructure automation
Airflow 731 Workflow orchestration Used for data pipeline scheduling and management
Ansible 727 IT automation framework Enables large-scale configuration and deployment management
Mlflow 812 ML lifecycle management Used for experiment tracking and model deployment
W3af 776 Web application security scanner Detects security vulnerabilities in web applications
Tornado 423 Web server and networking framework Used in asynchronous and real-time web services
Jupyter 369 Interactive computing environment Core platform for data science and AI research
Bandit 310 Security static analyzer Identifies insecure coding practices in Python
Volatility 241 Memory forensics framework Used in digital forensics and incident response
Flask 141 Lightweight web framework Used for API and microservice development
Paramiko 336 SSH communication library Used for secure remote automation and data transfer
Requests 139 HTTP networking library Standard Python library for web communication
Yaml 53 YAML parsing and serialization Used for configuration management and data exchange
Total 7899

Dataset Files

The dataset is provided with train and test splits.

File Description
train.csv Training split of the PyCode-Vul dataset
test.csv Test split of the PyCode-Vul dataset

Each sample may contain Python code, repository information, commit information, before/after function information, changed lines, hashes, and vulnerability-related labels or metadata.


Experimental Results

The paper evaluates several CodePTMs on PyCode-Vul and benchmark vulnerability datasets, including CVEFixes, VUDENC, Code_Vulnerability_Python, Buggy_Python, Py Data, PCV+Merge, and PyCode-Vul Test.

The models include CodeBERT, CodeGPT, CodeBERTa, DeBERTa-v3, CodeParrot, GraphCodeBERT, DistilBERT, UniXcoder, CodeGen-Mono, and CodeT5+.

The following table reports the full performance assessment from the paper.

Table IV. Performance Assessment of Fine-Tuned CodePTMs on the PyCode_Vul Dataset

Notes

  • Δ represents the aggregated test datasets: CVEFixes, VUDENC, Code_Vulnerability_Python, Buggy_Python, Py Data, and PyCode_Vul Test.
  • denotes results evaluated on the PyCode_Vul testing set.
  • * indicates the best performance.
  • Values without the asterisk represent the second-best result.

CVEFixes

Model Acc. Pre. Rec. Spe. F1. MCC Kappa. MSE MAE AUC.
CodeBERT 0.5391 0.6626 0.1594 0.9188 0.2570 0.1202 0.0782 0.4608 0.4608 0.6393
CodeGPT 0.5391 0.8648 0.0927 0.9855 0.1675 0.1737 0.0782 0.4608 0.4608 0.6663
CodeBERTa 0.5304 0.7333 0.0950 0.9652 0.1692 0.1232 0.0608 0.4695 0.4695 0.6335
DeBERTa-v3 0.5492 0.7931 0.1333 0.9652 0.2282 0.1775 0.0985 0.4507 0.4507 0.6780
CodeParrot 0.5565 0.7600 0.1652 0.9478 0.2714 0.1815 0.1130 0.4434 0.4434 0.6581
GraphCodeBERT 0.5333 0.6533 0.1420 0.9246 0.2333 0.1070 0.0666 0.4666 0.4666 0.6559
DistilBERT 0.5478 0.6736 0.1855 0.9101 0.2909 0.1388 0.0956 0.4521 0.4521 0.6113
UniXcoder 0.5362 0.6506 0.1565 0.9159 0.2523 0.1113 0.0724 0.4637 0.4637 0.6222
CodeGen-Mono 0.5347 0.7000 0.1217 0.9478 0.2074 0.1234 0.0695 0.4652 0.4652 0.6350
CodeT5+ 0.5318 0.6617 0.1304 0.9333 0.2179 0.1069 0.0637 0.4681 0.4681 0.6329

VUDENC

Model Acc. Pre. Rec. Spe. F1. MCC Kappa. MSE MAE AUC.
CodeBERT 0.5811 0.7433 0.2477 0.9144 0.3711 0.2176 0.1622 0.4188 0.4188 0.7085
CodeGPT 0.5793 0.8617 0.1889 0.9609 0.3099 0.2538 0.1586 0.4206 0.4206 0.6714
CodeBERTa 0.6247 0.8333 0.3119 0.9376 0.4530 0.3199 0.2495 0.3752 0.3752 0.7700
DeBERTa-v3 0.5962 0.8139 0.2495 0.9429 0.3819 0.2671 0.1925 0.4037 0.4037 0.7530
CodeParrot 0.6310 0.8295 0.3207 0.9322 0.4719 0.3283 0.2620 0.3689 0.3689 0.7299
GraphCodeBERT 0.6096 0.8090 0.2869 0.9322 0.4236 0.2869 0.2192 0.3903 0.3903 0.7184
DistilBERT 0.5333 0.5714 0.2666 0.8000 0.3636 0.0788 0.0666 0.4666 0.4666 0.5866
UniXcoder 0.5784 0.7933 0.2121 0.9447 0.3347 0.2304 0.1568 0.4215 0.4215 0.6894
CodeGen-Mono 0.5333 0.6000 0.2000 0.8666 0.3000 0.0894 0.0666 0.4666 0.4666 0.4577
CodeT5+ 0.5819 0.7911 0.2228 0.9411 0.3477 0.2357 0.1639 0.4180 0.4180 0.6721

Code_vulnerability_python

Model Acc. Pre. Rec. Spe. F1. MCC Kappa. MSE MAE AUC.
CodeBERT 0.4787 0.4838 0.6367 0.3207 0.5498 -0.0447 -0.0424 0.5212 0.5212 0.5337
CodeGPT 0.5247 0.5221 0.5825 0.4669 0.5507 0.0498 0.0495 0.4752 0.4752 0.4575
CodeBERTa 0.5259 0.5205 0.6556 0.3962 0.5803 0.0518 0.0518 0.4740 0.4740 0.5387
DeBERTa-v3 0.5283 0.5235 0.6297 0.4268 0.5717 0.0578 0.0566 0.4716 0.4716 0.5295
CodeParrot 0.5141 0.5090 0.7971 0.2311 0.6213 0.0343 0.0283 0.4858 0.4858 0.5011
GraphCodeBERT 0.5129 0.5088 0.7476 0.2783 0.6055 0.0293 0.0259 0.4870 0.4870 0.5726
DistilBERT 0.5341 0.5324 0.5613 0.5070 0.5464 0.0684 0.0683 0.4658 0.4658 0.5230
UniXcoder 0.5424 0.5302 0.7452 0.3396 0.6196 0.0928 0.0400 0.4575 0.4575 0.5872
CodeGen-Mono 0.4492 0.4188 0.2617 0.6367 0.3222 -0.1093 -0.1014 0.5507 0.5507 0.4394
CodeT5+ 0.5165 0.5128 0.6603 0.3726 0.5773 0.0344 0.0330 0.4834 0.4834 0.5561

Train Dataset: PyCode_Vul | Test Dataset: Buggy_python

Model Acc. Pre. Rec. Spe. F1. MCC Kappa. MSE MAE AUC.
CodeBERT 0.5173 0.6394 0.0769 0.9550 0.1417 0.0718 0.0347 0.4826 0.4826 0.4819
CodeGPT 0.5179 0.6376 0.0832 0.9526 0.1473 0.0727 0.0359 0.4820 0.4820 0.4865
CodeBERTa 0.5176 0.6439 0.0790 0.9562 0.1408 0.0736 0.0353 0.4823 0.4823 0.5243
DeBERTa-v3 0.5173 0.6435 0.0778 0.9568 0.1389 0.0728 0.0347 0.4826 0.4826 0.4907
CodeParrot 0.5158 0.6280 0.0778 0.9538 0.1385 0.0658 0.0317 0.4841 0.4841 0.5629
GraphCodeBERT 0.5161 0.5363 0.0754 0.9568 0.1349 0.0684 0.0323 0.4838 0.4838 0.4336
DistilBERT 0.5173 0.6394 0.0763 0.9550 0.1417 0.0718 0.0347 0.4826 0.4826 0.5121
UniXcoder 0.5158 0.6345 0.0748 0.9568 0.1330 0.0673 0.0317 0.4841 0.4841 0.4242
CodeGen-Mono 0.5131 0.5814 0.0940 0.9322 0.1619 0.0483 0.0263 0.4868 0.4868 0.6046
CodeT5+ 0.5173 0.6380 0.0802 0.9544 0.1426 0.0711 0.0347 0.4826 0.4826 0.5347

Train Dataset: PyCode_Vul | Test Dataset: Py Data

Model Acc. Pre. Rec. Spe. F1. MCC Kappa. MSE MAE AUC.
CodeBERT 0.5666 0.6666 0.2666 0.8666 0.3809 0.1666 0.1333 0.4333 0.4333 0.5955
CodeGPT 0.5333 0.5714 0.2666 0.8000 0.3636 0.0788 0.0666 0.4666 0.4666 0.5444
CodeBERTa 0.5666 0.6666 0.2666 0.8666 0.3809 0.1666 0.1333 0.4333 0.4333 0.6266
DeBERTa-v3 0.5666 0.6666 0.2666 0.8666 0.3809 0.1666 0.1333 0.4333 0.4333 0.6000
CodeParrot 0.5666 0.6000 0.4000 0.7333 0.4800 0.1414 0.1313 0.4333 0.4333 0.4977
GraphCodeBERT 0.5666 0.6666 0.2666 0.8666 0.3809 0.1666 0.1333 0.4333 0.4333 0.5111
DistilBERT 0.5333 0.5714 0.2666 0.8000 0.3636 0.0788 0.0666 0.4666 0.4666 0.5866
UniXcoder 0.6000 0.7142 0.3333 0.8666 0.4450 0.2364 0.1999 0.4000 0.4000 0.6133
CodeGen-Mono 0.5333 0.6000 0.2000 0.8666 0.3000 0.0894 0.0666 0.4666 0.4666 0.4577
CodeT5+ 0.5666 0.6666 0.2666 0.8666 0.3809 0.1666 0.1333 0.4333 0.4333 0.5688

PCV+MergeΔ

Model Acc. Pre. Rec. Spe. F1. MCC Kappa. MSE MAE AUC.
CodeBERT 0.7858 0.9461 0.6244 0.9613 0.7523 0.6161 0.5772 0.2141 0.2141 0.7872
CodeGPT 0.7870 0.9650 0.6133 0.9758 0.7500 0.6254 0.5799 0.2129 0.2129 0.8801
CodeBERTa 0.7962 0.9670 0.6303 0.9766 0.7632 0.6403 0.5979 0.2037 0.2037 0.8372
DeBERTa-v3 0.7901 0.9613 0.6222 0.9726 0.7553 0.6285 0.5858 0.2098 0.2098 0.7835
CodeParrot 0.7959 0.9525 0.6400 0.9653 0.7656 0.6340 0.5968 0.2040 0.2040 0.8671
GraphCodeBERT 0.7951 0.9140 0.6392 0.9645 0.7647 0.6324 0.5953 0.2048 0.2048 0.8038
DistilBERT 0.7974 0.9598 0.6377 0.9710 0.7663 0.6393 0.6000 0.2025 0.2025 0.8512
UniXcoder 0.7935 0.9594 0.6303 0.9710 0.7608 0.6332 0.5925 0.2064 0.2034 0.7711
CodeGen-Mono 0.7677 0.9348 0.5955 0.9549 0.7276 0.5840 0.5416 0.2322 0.2322 0.8019
CodeT5+ 0.7889 0.9588 0.6214 0.9710 0.7541 0.6259 0.5835 0.2110 0.2110 0.8329

PyCode_Vul Test★

Model Acc. Pre. Rec. Spe. F1. MCC Kappa. MSE MAE AUC.
CodeBERT 0.9614 0.9572 0.9556 0.9659 0.9564 0.9217 0.9217 0.0385 0.0385 0.9608
CodeGPT 0.9621 0.9501 0.9651 0.9596 0.9576 0.9234 0.9233 0.0378 0.0378 0.9836
CodeBERTa 0.9775 0.9716 0.9778 0.9773 0.9747 0.9545 0.9545 0.0224 0.0224 0.9954*
DeBERTa-v3 0.9761 0.9776 0.9683 0.9823* 0.9729 0.9516 0.9516 0.0238 0.0238 0.9941
CodeParrot 0.9515 0.9350 0.9572 0.9470 0.9460 0.9023 0.8984 0.0484 0.0484 0.9804
GraphCodeBERT 0.9621 0.9529 0.9620 0.9621 0.9574 0.9233 0.9233 0.0370 0.0370 0.9621
DistilBERT 0.9677 0.9665 0.9604 0.9735 0.9634 0.9345 0.9345 0.0322 0.0322 0.9669
UniXcoder 0.9810* 0.9778* 0.9794* 0.9823* 0.9786* 0.9616* 0.9616 0.0189* 0.0189* 0.9808
CodeGen-Mono 0.9038 0.9024 0.8781 0.9243 0.8901 0.8022 0.8046 0.0961 0.0961 0.9012
CodeT5+ 0.9754 0.9686 0.9762 0.9747 0.9724 0.9503 0.9502 0.0245 0.0245 0.9755

Key Result Summary

On the PyCode-Vul Test set, the evaluated models achieved strong performance. UniXcoder obtained the best reported performance across several metrics, including accuracy, precision, recall, specificity, F1, MCC, Kappa, MSE, and MAE. CodeBERTa achieved the highest AUC score in the reported table.


Related Links

Citation

If you use PyCode-Vul in your research, please cite the following paper:

A Benchmark Dataset for Code-Level Vulnerability Detection and Analysis
Tasmin Karim, Mst Shapna Akter, and Alfredo Cuzzocrea.
In 2025 IEEE International Conference on Big Data (BigData), pp. 4237–4246, IEEE, 2025.

@inproceedings{karim2025benchmark,
  title={A Benchmark Dataset for Code-Level Vulnerability Detection and Analysis},
  author={Karim, Tasmin and Akter, Mst Shapna and Cuzzocrea, Alfredo},
  booktitle={2025 IEEE International Conference on Big Data (BigData)},
  pages={4237--4246},
  year={2025},
  organization={IEEE}
}

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