Datasets:
image string | mask string | label list | modality string | dataset string | official_split string | patient_id string |
|---|---|---|---|---|---|---|
data/nii/ATM22/dataset/ATM_001/imaging.nii.gz | data/nii/ATM22/dataset/ATM_001/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_001 |
data/nii/ATM22/dataset/ATM_002/imaging.nii.gz | data/nii/ATM22/dataset/ATM_002/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_002 |
data/nii/ATM22/dataset/ATM_003/imaging.nii.gz | data/nii/ATM22/dataset/ATM_003/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_003 |
data/nii/ATM22/dataset/ATM_004/imaging.nii.gz | data/nii/ATM22/dataset/ATM_004/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_004 |
data/nii/ATM22/dataset/ATM_005/imaging.nii.gz | data/nii/ATM22/dataset/ATM_005/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_005 |
data/nii/ATM22/dataset/ATM_006/imaging.nii.gz | data/nii/ATM22/dataset/ATM_006/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_006 |
data/nii/ATM22/dataset/ATM_007/imaging.nii.gz | data/nii/ATM22/dataset/ATM_007/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_007 |
data/nii/ATM22/dataset/ATM_008/imaging.nii.gz | data/nii/ATM22/dataset/ATM_008/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_008 |
data/nii/ATM22/dataset/ATM_009/imaging.nii.gz | data/nii/ATM22/dataset/ATM_009/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_009 |
data/nii/ATM22/dataset/ATM_010/imaging.nii.gz | data/nii/ATM22/dataset/ATM_010/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_010 |
data/nii/ATM22/dataset/ATM_011/imaging.nii.gz | data/nii/ATM22/dataset/ATM_011/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_011 |
data/nii/ATM22/dataset/ATM_012/imaging.nii.gz | data/nii/ATM22/dataset/ATM_012/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_012 |
data/nii/ATM22/dataset/ATM_013/imaging.nii.gz | data/nii/ATM22/dataset/ATM_013/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_013 |
data/nii/ATM22/dataset/ATM_014/imaging.nii.gz | data/nii/ATM22/dataset/ATM_014/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_014 |
data/nii/ATM22/dataset/ATM_015/imaging.nii.gz | data/nii/ATM22/dataset/ATM_015/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_015 |
data/nii/ATM22/dataset/ATM_016/imaging.nii.gz | data/nii/ATM22/dataset/ATM_016/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_016 |
data/nii/ATM22/dataset/ATM_017/imaging.nii.gz | data/nii/ATM22/dataset/ATM_017/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_017 |
data/nii/ATM22/dataset/ATM_018/imaging.nii.gz | data/nii/ATM22/dataset/ATM_018/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_018 |
data/nii/ATM22/dataset/ATM_019/imaging.nii.gz | data/nii/ATM22/dataset/ATM_019/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_019 |
data/nii/ATM22/dataset/ATM_020/imaging.nii.gz | data/nii/ATM22/dataset/ATM_020/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_020 |
data/nii/ATM22/dataset/ATM_021/imaging.nii.gz | data/nii/ATM22/dataset/ATM_021/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_021 |
data/nii/ATM22/dataset/ATM_022/imaging.nii.gz | data/nii/ATM22/dataset/ATM_022/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_022 |
data/nii/ATM22/dataset/ATM_023/imaging.nii.gz | data/nii/ATM22/dataset/ATM_023/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_023 |
data/nii/ATM22/dataset/ATM_024/imaging.nii.gz | data/nii/ATM22/dataset/ATM_024/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_024 |
data/nii/ATM22/dataset/ATM_025/imaging.nii.gz | data/nii/ATM22/dataset/ATM_025/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_025 |
data/nii/ATM22/dataset/ATM_026/imaging.nii.gz | data/nii/ATM22/dataset/ATM_026/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_026 |
data/nii/ATM22/dataset/ATM_027/imaging.nii.gz | data/nii/ATM22/dataset/ATM_027/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_027 |
data/nii/ATM22/dataset/ATM_028/imaging.nii.gz | data/nii/ATM22/dataset/ATM_028/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_028 |
data/nii/ATM22/dataset/ATM_029/imaging.nii.gz | data/nii/ATM22/dataset/ATM_029/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_029 |
data/nii/ATM22/dataset/ATM_030/imaging.nii.gz | data/nii/ATM22/dataset/ATM_030/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_030 |
data/nii/ATM22/dataset/ATM_031/imaging.nii.gz | data/nii/ATM22/dataset/ATM_031/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_031 |
data/nii/ATM22/dataset/ATM_032/imaging.nii.gz | data/nii/ATM22/dataset/ATM_032/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_032 |
data/nii/ATM22/dataset/ATM_033/imaging.nii.gz | data/nii/ATM22/dataset/ATM_033/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_033 |
data/nii/ATM22/dataset/ATM_034/imaging.nii.gz | data/nii/ATM22/dataset/ATM_034/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_034 |
data/nii/ATM22/dataset/ATM_036/imaging.nii.gz | data/nii/ATM22/dataset/ATM_036/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_036 |
data/nii/ATM22/dataset/ATM_037/imaging.nii.gz | data/nii/ATM22/dataset/ATM_037/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_037 |
data/nii/ATM22/dataset/ATM_038/imaging.nii.gz | data/nii/ATM22/dataset/ATM_038/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_038 |
data/nii/ATM22/dataset/ATM_039/imaging.nii.gz | data/nii/ATM22/dataset/ATM_039/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_039 |
data/nii/ATM22/dataset/ATM_040/imaging.nii.gz | data/nii/ATM22/dataset/ATM_040/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_040 |
data/nii/ATM22/dataset/ATM_041/imaging.nii.gz | data/nii/ATM22/dataset/ATM_041/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_041 |
data/nii/ATM22/dataset/ATM_042/imaging.nii.gz | data/nii/ATM22/dataset/ATM_042/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_042 |
data/nii/ATM22/dataset/ATM_043/imaging.nii.gz | data/nii/ATM22/dataset/ATM_043/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_043 |
data/nii/ATM22/dataset/ATM_044/imaging.nii.gz | data/nii/ATM22/dataset/ATM_044/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_044 |
data/nii/ATM22/dataset/ATM_045/imaging.nii.gz | data/nii/ATM22/dataset/ATM_045/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_045 |
data/nii/ATM22/dataset/ATM_046/imaging.nii.gz | data/nii/ATM22/dataset/ATM_046/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_046 |
data/nii/ATM22/dataset/ATM_047/imaging.nii.gz | data/nii/ATM22/dataset/ATM_047/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_047 |
data/nii/ATM22/dataset/ATM_048/imaging.nii.gz | data/nii/ATM22/dataset/ATM_048/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_048 |
data/nii/ATM22/dataset/ATM_049/imaging.nii.gz | data/nii/ATM22/dataset/ATM_049/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_049 |
data/nii/ATM22/dataset/ATM_050/imaging.nii.gz | data/nii/ATM22/dataset/ATM_050/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_050 |
data/nii/ATM22/dataset/ATM_051/imaging.nii.gz | data/nii/ATM22/dataset/ATM_051/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_051 |
data/nii/ATM22/dataset/ATM_052/imaging.nii.gz | data/nii/ATM22/dataset/ATM_052/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_052 |
data/nii/ATM22/dataset/ATM_053/imaging.nii.gz | data/nii/ATM22/dataset/ATM_053/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_053 |
data/nii/ATM22/dataset/ATM_054/imaging.nii.gz | data/nii/ATM22/dataset/ATM_054/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_054 |
data/nii/ATM22/dataset/ATM_055/imaging.nii.gz | data/nii/ATM22/dataset/ATM_055/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_055 |
data/nii/ATM22/dataset/ATM_056/imaging.nii.gz | data/nii/ATM22/dataset/ATM_056/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_056 |
data/nii/ATM22/dataset/ATM_057/imaging.nii.gz | data/nii/ATM22/dataset/ATM_057/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_057 |
data/nii/ATM22/dataset/ATM_058/imaging.nii.gz | data/nii/ATM22/dataset/ATM_058/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_058 |
data/nii/ATM22/dataset/ATM_059/imaging.nii.gz | data/nii/ATM22/dataset/ATM_059/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_059 |
data/nii/ATM22/dataset/ATM_060/imaging.nii.gz | data/nii/ATM22/dataset/ATM_060/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_060 |
data/nii/ATM22/dataset/ATM_061/imaging.nii.gz | data/nii/ATM22/dataset/ATM_061/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_061 |
data/nii/ATM22/dataset/ATM_062/imaging.nii.gz | data/nii/ATM22/dataset/ATM_062/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_062 |
data/nii/ATM22/dataset/ATM_063/imaging.nii.gz | data/nii/ATM22/dataset/ATM_063/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_063 |
data/nii/ATM22/dataset/ATM_064/imaging.nii.gz | data/nii/ATM22/dataset/ATM_064/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_064 |
data/nii/ATM22/dataset/ATM_065/imaging.nii.gz | data/nii/ATM22/dataset/ATM_065/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_065 |
data/nii/ATM22/dataset/ATM_066/imaging.nii.gz | data/nii/ATM22/dataset/ATM_066/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_066 |
data/nii/ATM22/dataset/ATM_067/imaging.nii.gz | data/nii/ATM22/dataset/ATM_067/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_067 |
data/nii/ATM22/dataset/ATM_068/imaging.nii.gz | data/nii/ATM22/dataset/ATM_068/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_068 |
data/nii/ATM22/dataset/ATM_069/imaging.nii.gz | data/nii/ATM22/dataset/ATM_069/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_069 |
data/nii/ATM22/dataset/ATM_070/imaging.nii.gz | data/nii/ATM22/dataset/ATM_070/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_070 |
data/nii/ATM22/dataset/ATM_071/imaging.nii.gz | data/nii/ATM22/dataset/ATM_071/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_071 |
data/nii/ATM22/dataset/ATM_072/imaging.nii.gz | data/nii/ATM22/dataset/ATM_072/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_072 |
data/nii/ATM22/dataset/ATM_073/imaging.nii.gz | data/nii/ATM22/dataset/ATM_073/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_073 |
data/nii/ATM22/dataset/ATM_074/imaging.nii.gz | data/nii/ATM22/dataset/ATM_074/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_074 |
data/nii/ATM22/dataset/ATM_075/imaging.nii.gz | data/nii/ATM22/dataset/ATM_075/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_075 |
data/nii/ATM22/dataset/ATM_076/imaging.nii.gz | data/nii/ATM22/dataset/ATM_076/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_076 |
data/nii/ATM22/dataset/ATM_077/imaging.nii.gz | data/nii/ATM22/dataset/ATM_077/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_077 |
data/nii/ATM22/dataset/ATM_078/imaging.nii.gz | data/nii/ATM22/dataset/ATM_078/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_078 |
data/nii/ATM22/dataset/ATM_079/imaging.nii.gz | data/nii/ATM22/dataset/ATM_079/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_079 |
data/nii/ATM22/dataset/ATM_080/imaging.nii.gz | data/nii/ATM22/dataset/ATM_080/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_080 |
data/nii/ATM22/dataset/ATM_081/imaging.nii.gz | data/nii/ATM22/dataset/ATM_081/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_081 |
data/nii/ATM22/dataset/ATM_082/imaging.nii.gz | data/nii/ATM22/dataset/ATM_082/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_082 |
data/nii/ATM22/dataset/ATM_083/imaging.nii.gz | data/nii/ATM22/dataset/ATM_083/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_083 |
data/nii/ATM22/dataset/ATM_084/imaging.nii.gz | data/nii/ATM22/dataset/ATM_084/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_084 |
data/nii/ATM22/dataset/ATM_085/imaging.nii.gz | data/nii/ATM22/dataset/ATM_085/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_085 |
data/nii/ATM22/dataset/ATM_086/imaging.nii.gz | data/nii/ATM22/dataset/ATM_086/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_086 |
data/nii/ATM22/dataset/ATM_087/imaging.nii.gz | data/nii/ATM22/dataset/ATM_087/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_087 |
data/nii/ATM22/dataset/ATM_088/imaging.nii.gz | data/nii/ATM22/dataset/ATM_088/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_088 |
data/nii/ATM22/dataset/ATM_089/imaging.nii.gz | data/nii/ATM22/dataset/ATM_089/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_089 |
data/nii/ATM22/dataset/ATM_090/imaging.nii.gz | data/nii/ATM22/dataset/ATM_090/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_090 |
data/nii/ATM22/dataset/ATM_091/imaging.nii.gz | data/nii/ATM22/dataset/ATM_091/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_091 |
data/nii/ATM22/dataset/ATM_092/imaging.nii.gz | data/nii/ATM22/dataset/ATM_092/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_092 |
data/nii/ATM22/dataset/ATM_093/imaging.nii.gz | data/nii/ATM22/dataset/ATM_093/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_093 |
data/nii/ATM22/dataset/ATM_094/imaging.nii.gz | data/nii/ATM22/dataset/ATM_094/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_094 |
data/nii/ATM22/dataset/ATM_095/imaging.nii.gz | data/nii/ATM22/dataset/ATM_095/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_095 |
data/nii/ATM22/dataset/ATM_096/imaging.nii.gz | data/nii/ATM22/dataset/ATM_096/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_096 |
data/nii/ATM22/dataset/ATM_097/imaging.nii.gz | data/nii/ATM22/dataset/ATM_097/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_097 |
data/nii/ATM22/dataset/ATM_098/imaging.nii.gz | data/nii/ATM22/dataset/ATM_098/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_098 |
data/nii/ATM22/dataset/ATM_099/imaging.nii.gz | data/nii/ATM22/dataset/ATM_099/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_099 |
data/nii/ATM22/dataset/ATM_100/imaging.nii.gz | data/nii/ATM22/dataset/ATM_100/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_100 |
data/nii/ATM22/dataset/ATM_108/imaging.nii.gz | data/nii/ATM22/dataset/ATM_108/segmentation.nii.gz | [
"airway"
] | CT | ATM22 | train | ATM_108 |
ATM22 — Airway Tree Modeling Challenge 2022 (re-mirror)
Re-hosted mirror of the ATM22 challenge training set (Zhang et al.,
Medical Image Analysis 2023, arXiv:2303.05745), originally distributed
through the ATM22 Grand Challenge.
This mirror rebuilds the data from the authors' own
Zenodo re-publication under
CC BY 4.0, restructured into the same layout we use for KiTS23 / KiPA22 /
AbdomenCT1K / etc. so a single Base3DDataset subclass can load it.
Composition
| Split | Cases | With mask |
|---|---|---|
| train | 299 | yes |
Original challenge composition: 300 train + 50 val (image-only) + 150 test
(withheld). This mirror ships train only (300 cases minus 1 for
ATM_164 whose label is misaligned with its corresponding image per
challenge errata = 299 usable cases). The val and test sets have no
public masks and so cannot be evaluated locally; refetch them from
Zenodo imagesVal.rar if you want inference-only inputs.
File layout
dataset/ATM_001/
imaging.nii.gz
segmentation.nii.gz
...
dataset/ATM_500/
train.jsonl
README.md
train.jsonl lists one entry per case with image, mask, label,
modality, dataset, official_split, patient_id keys. Image/mask
paths are prefixed with data/nii/ATM22/ so they slot directly into
the EasyMedSeg Base3DDataset HF_JSONL_PREFIX convention.
Mask labels
Binary airway mask:
| Value | Class |
|---|---|
| 0 | background |
| 1 | airway |
The airway annotation includes trachea, main bronchi, lobar bronchi, and segmental bronchi as one composite class (no branch-level subclasses in the public release).
License
CC BY 4.0, inherited from the upstream Zenodo mirror. The official challenge organizers' research-only terms apply on top. Cite the benchmark paper:
@article{zhang2023multi,
title = {Multi-site, multi-domain airway tree modeling (ATM'22):
A public benchmark for pulmonary airway segmentation},
author = {Zhang, Minghui and Wu, Yangqian and Zhang, Hanxiao and others},
journal = {Medical Image Analysis},
year = {2023},
doi = {10.1016/j.media.2023.102957}
}
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