Datasets:

---

Jigyasa3

/

validation_scripts

Like 0

Error code:   DatasetGenerationCastError
Exception:    DatasetGenerationCastError
Message:      An error occurred while generating the dataset

All the data files must have the same columns, but at some point there are 7 new columns ({'clade', 'phenotype', 'repeat', 'scheme', 'ID', 'strain_id', 'fold'}) and 8 missing columns ({'gca', 'n_16s_accessions', 'tip_status', 'labels_16s', 'bacdive_id', 'decanoate', 'species', 'accession_16s'}).

This happened while the csv dataset builder was generating data using

hf://datasets/Jigyasa3/validation_scripts/data_for_collaborators/data_16S_related/decanoate_cv_folds_repeated.csv (at revision b4cbbf5dbf69e9a76dd09b35b23a067ec54849bb), ['hf://datasets/Jigyasa3/validation_scripts@b4cbbf5dbf69e9a76dd09b35b23a067ec54849bb/data_for_collaborators/data_16S_related/decanoate_16s_phenotype.csv', 'hf://datasets/Jigyasa3/validation_scripts@b4cbbf5dbf69e9a76dd09b35b23a067ec54849bb/data_for_collaborators/data_16S_related/decanoate_cv_folds_repeated.csv', 'hf://datasets/Jigyasa3/validation_scripts@b4cbbf5dbf69e9a76dd09b35b23a067ec54849bb/data_for_collaborators/data_16S_related/decanoate_genome_ids.csv', 'hf://datasets/Jigyasa3/validation_scripts@b4cbbf5dbf69e9a76dd09b35b23a067ec54849bb/data_for_collaborators/evo2_embeddings/decanoate_blocks26_maxpool.csv', 'hf://datasets/Jigyasa3/validation_scripts@b4cbbf5dbf69e9a76dd09b35b23a067ec54849bb/data_for_collaborators/evo2_embeddings/decanoate_blocks26_meanpool.csv']

Please either edit the data files to have matching columns, or separate them into different configurations (see docs at https://hf.co/docs/hub/datasets-manual-configuration#multiple-configurations)
Traceback:    Traceback (most recent call last):
                File "/usr/local/lib/python3.14/site-packages/datasets/builder.py", line 1848, in _prepare_split_single
                  writer.write_table(table)
                  ~~~~~~~~~~~~~~~~~~^^^^^^^
                File "/usr/local/lib/python3.14/site-packages/datasets/arrow_writer.py", line 784, in write_table
                  self._write_table(pa_table, writer_batch_size=writer_batch_size)
                  ~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
                File "/usr/local/lib/python3.14/site-packages/datasets/arrow_writer.py", line 795, in _write_table
                  pa_table = table_cast(pa_table, self._schema)
                File "/usr/local/lib/python3.14/site-packages/datasets/table.py", line 2378, in table_cast
                  return cast_table_to_schema(table, schema)
                File "/usr/local/lib/python3.14/site-packages/datasets/table.py", line 2306, in cast_table_to_schema
                  raise CastError(
                  ...<3 lines>...
                  )
              datasets.table.CastError: Couldn't cast
              scheme: string
              repeat: int64
              strain_id: string
              ID: int64
              genome_id: string
              phenotype: string
              genus: string
              clade: string
              fold: int64
              -- schema metadata --
              pandas: '{"index_columns": [{"kind": "range", "name": null, "start": 0, "' + 1282
              to
              {'genome_id': Value('string'), 'gca': Value('string'), 'bacdive_id': Value('int64'), 'accession_16s': Value('string'), 'labels_16s': Value('string'), 'decanoate': Value('string'), 'n_16s_accessions': Value('int64'), 'tip_status': Value('string'), 'species': Value('string'), 'genus': Value('string')}
              because column names don't match
              
              During handling of the above exception, another exception occurred:
              
              Traceback (most recent call last):
                File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 1369, in compute_config_parquet_and_info_response
                  parquet_operations, partial, estimated_dataset_info = stream_convert_to_parquet(
                                                                        ~~~~~~~~~~~~~~~~~~~~~~~~~^
                      builder, max_dataset_size_bytes=max_dataset_size_bytes
                      ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
                  )
                  ^
                File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 948, in stream_convert_to_parquet
                  builder._prepare_split(split_generator=splits_generators[split], file_format="parquet")
                  ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
                File "/usr/local/lib/python3.14/site-packages/datasets/builder.py", line 1694, in _prepare_split
                  for job_id, done, content in self._prepare_split_single(
                                               ~~~~~~~~~~~~~~~~~~~~~~~~~~^
                      gen_kwargs=gen_kwargs, job_id=job_id, **_prepare_split_args
                      ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
                  ):
                  ^
                File "/usr/local/lib/python3.14/site-packages/datasets/builder.py", line 1850, in _prepare_split_single
                  raise DatasetGenerationCastError.from_cast_error(
                  ...<4 lines>...
                  )
              datasets.exceptions.DatasetGenerationCastError: An error occurred while generating the dataset
              
              All the data files must have the same columns, but at some point there are 7 new columns ({'clade', 'phenotype', 'repeat', 'scheme', 'ID', 'strain_id', 'fold'}) and 8 missing columns ({'gca', 'n_16s_accessions', 'tip_status', 'labels_16s', 'bacdive_id', 'decanoate', 'species', 'accession_16s'}).
              
              This happened while the csv dataset builder was generating data using
              
              hf://datasets/Jigyasa3/validation_scripts/data_for_collaborators/data_16S_related/decanoate_cv_folds_repeated.csv (at revision b4cbbf5dbf69e9a76dd09b35b23a067ec54849bb), ['hf://datasets/Jigyasa3/validation_scripts@b4cbbf5dbf69e9a76dd09b35b23a067ec54849bb/data_for_collaborators/data_16S_related/decanoate_16s_phenotype.csv', 'hf://datasets/Jigyasa3/validation_scripts@b4cbbf5dbf69e9a76dd09b35b23a067ec54849bb/data_for_collaborators/data_16S_related/decanoate_cv_folds_repeated.csv', 'hf://datasets/Jigyasa3/validation_scripts@b4cbbf5dbf69e9a76dd09b35b23a067ec54849bb/data_for_collaborators/data_16S_related/decanoate_genome_ids.csv', 'hf://datasets/Jigyasa3/validation_scripts@b4cbbf5dbf69e9a76dd09b35b23a067ec54849bb/data_for_collaborators/evo2_embeddings/decanoate_blocks26_maxpool.csv', 'hf://datasets/Jigyasa3/validation_scripts@b4cbbf5dbf69e9a76dd09b35b23a067ec54849bb/data_for_collaborators/evo2_embeddings/decanoate_blocks26_meanpool.csv']
              
              Please either edit the data files to have matching columns, or separate them into different configurations (see docs at https://hf.co/docs/hub/datasets-manual-configuration#multiple-configurations)