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Datasets:
GaboG7
/
SHIFU-Corpus

Modalities:
Text
Formats:
csv
Languages:
English
Size:
10K - 100K
Tags:
biology
rna
rna-secondary-structure
rna-structure
shifu
benchmark
Libraries:
Datasets
Dask
Polars
License:
Dataset card Data Studio Files
xet
 Community
Dataset Viewer
Auto-converted to Parquet Duplicate
filename
stringlengths
24
24
sequence
stringlengths
20
4.86k
X2D_DSSR
stringlengths
20
4.86k
family
stringclasses
8 values
source_dataset
stringclasses
6 values
length
int64
20
4.86k
34029b98e615e9245712e416
GCCGAGAGCAUCGCGCCCGAGGCCCACGCUUAUCAGUUCGAGGGCAACCUCGAUCAACUGUUCGGGCGCAGGGCGCGAGAUCCGGCGUGCGGCCCCUGCUGAAUUACGGUGGUGCUGACACCGAGGCGUUAUCGGGCGCGCACGCCGGGCUCUCGGCUCUUA
(((((((((.((((((.(((((..((((.......((..((((....)))).))..))))..))))))).....)))))..((((((((((((((............((((.......))))...........)))).)))))))))).)))))))).....
null
rnasstr
162
9fb38e52878db79834e7c805
GCCGAGAGCAUCGCGCCCGAGGCCCACGCUUAUCAGUUCGAGGGCAACCUCGAUCAACUGUUCGGGCGCAGGGCGCGAGAUCCGGCGUGCGGCCCCUGCUGAAUUACGGUGGUGCUGACACCGAGGCGUUAUCGGGCACGCACGCCGGGCUCUCGGCUCUUA
(((((((((.((((((.(((((..((((.......((..((((....)))).))..))))..))))))).....)))))..((((((((((((((............((((.......))))...........)))).)))))))))).)))))))).....
null
rnasstr
162
0666bbfe9cfe30a325a8842d
GCCGAGAGCAUCGCGCCCGAGGCCCACGCUUAUCAGUUCGAGGGAAACCUCGAUCAACUGUUCGGGCGCAGGGCGCGAGAUCCGGCGUGCGGCCCCUGCUGAAUUACGGUGGUGCUGACACCGAGGCGUUAUCGGGCGCGCACGCCGGGCUCUCGGCUCUUA
(((((((((.((((((.(((((..((((.......((..((((....)))).))..))))..))))))).....)))))..((((((((((((((............((((.......))))...........)))).)))))))))).)))))))).....
null
rnasstr
162
d2ac2e26cdc4ef2609ce59fb
GUCGAGAGCAUCGCGCCCGAGGCCCACGCUUAUCAGUUCGAGGGCAACCUCGAUCAACUGUUCGGGCGCAGGGCGCGAGAUCCGGCGUGCGGCCCCUGCUGAAUUACGGUGGUGCUGACACCGAGGCGUUAUCGGGCGCGCACGCCGGGCUCUCGGCUCUUA
(((((((((.((((((.(((((..((((.......((..((((....)))).))..))))..))))))).....)))))..((((((((((((((............((((.......))))...........)))).)))))))))).)))))))).....
null
rnasstr
162
5ab410ca4b2c82934cb4bbbc
GCCGAGAGCAUCGCGCCCGAGGCCCACGCUUAUCAGUUCGAGGGCAACCUCGAUCAACUGUUCGGGCGCAGGGCGCGAGAUCCGGCGUGCGGCCCCUGCUGAAUUACGGUGGUGCUGACACCGAGGCGUUAUCGGGCGCGCACGCCGGGCUCUCGGCUCUCA
(((((((((.((((((.(((((..((((.......((..((((....)))).))..))))..))))))).....)))))..((((((((((((((............((((.......))))...........)))).)))))))))).)))))))).....
null
rnasstr
162
494fd63c7fad9dea42edabcd
GCCGAGAGCAUCGCGCCCGAGGCCCACGCUUAUCAGUUCGAGGGAAACCUCGUCCAACUGUUCGGGCGCAGGGCGCGAGAUCCGGCGUGCGGCCCCUGCUGAAUUACGGUGGUGCUGACACCGAGGCGUUAUCGGGCGCGCACGCCGGGCUCUCGGUUCUAG
(((((((((.((((((.(((((..((((.......((..((((....)))).))..))))..))))))).....)))))..((((((((((((((............((((.......))))...........)))).)))))))))).)))))))).....
null
rnasstr
162
a1d8b8bb15b36baac4729ea6
GAUAGAGUAGUAAGUCACUCUGGGUAUCUAACUGAUGCCUCAGCUUAAUUUGCCUGACCCUCGUAAACUAAGCUGAAAACCUUCUACAUGUCGACAAGGCAUAUCUUGUCUUUGGCCAGCCCCUCUUCAGGCUGGCUUUUUUUUGC
....((((........))))..((((((.....)))))).......(((((((.........)))))))........................((((((....)))))).....(((((((........)))))))..........
null
rnasstr
146
71a27beeaef4ead6594b182f
GAUAGAGUAGUAAGUCACUCUGGGUAUCUAACUGAUGCCUCAGCUUAAUUUGCCUGACCCUCGUAAACUAAGCUGAAAAUCUUCUACAUGUCGACAAGGCAUAUCUUGUCUUUGGCCAGCCCCUCUUCAGGCUGGCUUUUUUUUUG
....((((........))))..((((((.....)))))).......(((((((.........)))))))........................((((((....)))))).....(((((((........)))))))..........
null
rnasstr
146
bb02a18df0d1418d4e191b19
GAUUAAGUUAUUAAGGGCGCACGGUGGAUGCCUUGGCACUAGAAGCCGAUGAAGGACGUUACUAACGACGAUAUGCUUUGGGGAGCUGUAAGUAAGCGUUGAUCCAGAGAUUUCCGAAUGGGGAAACCCAGCACGAGUUAUGUCGUGUUAUCUGCAUGUGAAUACAUAGCAUGCAAGAAGGCAGACCCGGAGAACUGAAACAUCUUAGUACCCGGAGGAAGAGAAAGAAAAAUCGAUUCCCUGAGUAGCGGCGAGCGAAACGGGAAGAGCCCAAACCAACAAGCUUGCUUGUUGGGGUUGUAGGACACUCUAUACGGAGU...
((((((((......((((((((((.....(((..(((((((((((((.....(((((((........))).....(((((((..(((.......))).....)))))))...))))...(((....)))(((((((......))))))).(((((((((.........))))))).)).))....((((((.....((....))......))))).).........((....))..((((((.....((.....))....)))))..((((....(((((((......)))))))......(((.(((((.............
null
rnasstr
2,922
87de8a0f4bf44526043fc850
GAUUAAGUUAUUAAGGGCGCACGGUGGAUGCCUUGGCACUAGAAGCCGAUGAAGGACGUUACUAACGACGAUAUGCUUUGGGGAGCUGUAAGUAAGCGUUGAUCCAGAGAUUUCCGAAUGGGGAAACCCAGCACGAGUUAUGUCGUGUUAUCUGCAUGUGAAUACAUAGCAUGCAAGAAGGCAGACCCGGAGAACUGAAACAUCUUAGUACCCGGAGGAAGAGAAAGAAAAAUCGAUUCCCUGAGUAGCGGCGAGCGAAACGGGAAGAGCCCAAACCAACAAGCUUGCUUGUUGGGGUUGUAGGACACUCUAUACGGAGU...
((((((((......((((((((((.....(((..(((((((((((((.....(((((((........))).....(((((((..(((.......))).....)))))))...))))...(((....)))(((((((......))))))).(((((((((.........))))))).)).))....((((((.....((....))......))))).).........((....))..((((((.....((.....))....)))))..((((....(((((((......)))))))......(((.(((((.............
null
rnasstr
2,919
5483034485579bfc5170e47a
GAUUAAGUUAUUAAGGGCGCACGGUGGAUGCCUUGGCACUAGAAGCCGAUGAAGGACGUUACUAACGACGAUAUGCUUUGGGGAGCUGUAAGUAAGCGUUGAUCCAGAGAUUUCCGAAUGGGGAAACCCAGCACGAGUUAUGUCGUGUUAUCUGCAUGUGAAUACAUAGCAUGCAAGAAGGCAGACCCGGAGAACUGAAACAUCUUAGUACCCGGAGGAAGAGAAAGAAAAAUCGAUUCCCUGAGUAGCGGCGAGCGAAACGGGAAGAGCCCAAACCAACAAGCUUGCUUGUUGGGGUUGUAGGACACUCUAUACGGAGU...
((((((((......((((((((((.....(((..(((((((((((((.....(((((((........))).....(((((((..(((.......))).....)))))))...))))...(((....)))(((((((......))))))).(((((((((.........))))))).)).))....((((((.....((....))......))))).).........((....))..((((((.....((.....))....)))))..((((....(((((((......)))))))......(((.(((((.............
null
rnasstr
2,922
17915d969f21d2652fc9009f
GAUUAAGUUAUUAAGGGCGCACGGUGGAUGCCUUGGCACUAGAAGCCGAUGAAGGACGUUACUAACGACGAUAUGCUUUGGGGAGCUGUAAGUAAGCGUUGAUCCAGAGAUUUCCGAAUGGGGAAACCCAACACGAGUUAUGUCGUGUUAUCUGCAUGUGAAUACAUAGCAUGCAAGAAGGCAGACCCGGAGAACUGAAACAUCUUAGUACCCGGAGGAAGAGAAAGAAAAAUCGAUUCCCUGAGUAGCGGCGAGCGAAACGGGAAGAGCCCAAACCAACAAGCUUGCUUGUUGGGGUUGUAGGACACUCUAUACGGAGU...
((((((((......((((((((((.....(((..(((((((((((((.....(((((((........))).....(((((((..(((.......))).....)))))))...))))...(((....)))(((((((......))))))).(((((((((.........))))))).)).))....((((((.....((....))......))))).).........((....))..((((((.....((.....))....)))))..((((....(((((((......)))))))......(((.(((((.............
null
rnasstr
2,922
7dd8357245931f07cabbb9c3
GAUUAAGUUAUUAAGGGCGCACGGUGGAUGCCUUGGCACUAGAAGCCGAUGAAGGACGUUACUAACGACGAUAUGCUUUGGGGAGCUGUAAGUAAGCGUUGAUCCAGAGAUUUCCGAAUGGGGAAACCCAGCACGAGUUAUGUCGUGUUAUCUGCAUGUGAAUACAUAGCAUGCAAGAAGGCAGACCCGGAGAACUGAAACAUCUUAGUACCCGGAGGAAGAGAAAGAAAAAUCGAUUCCCUGAGUAGCGGCGAGCGAAACGGGAAGAGCCCAAACCAACAAGCUUGCUUGUUGGGGUUGUAGGACACUCUAUACGGAGU...
((((((((......((((((((((.....(((..(((((((((((((.....(((((((........))).....(((((((..(((.......))).....)))))))...))))...(((....)))(((((((......))))))).(((((((((.........))))))).)).))....((((((.....((....))......))))).).........((....))..((((((.....((.....))....)))))..((((....(((((((......)))))))......(((.(((((.............
null
rnasstr
2,920
1af7b5373f407f0fc23439b7
GAUUAAGUUAUUAAGGGCGCACGGUGGAUGCCUUGGCACUAGAAGCCGAUGAAGGACGUUACUAACGACGAUAUGCUUUGGGGAGCUGUAAGUAAGCGUUGAUCCAGAGAUUUCCGAAUGGGGAAACCCAGCACGAGUUAUGUCGUGUUAUCUGCAUGUGAAUACAUAGCAUGCAAGAAGGCAGACCCGGAGAACUGAAACAUCUUAGUACCCGGAGGAAGAGAAAGAAAAAUCGAUUCCCUGAGUAGCGGCGAGCGAAACGGGAAGAGCCCAAACCAACAAGCUUGCUUGUUGGGGUUGUAGGACACUCUAUACGGAGU...
((((((((......((((((((((.....(((..(((((((((((((.....(((((((........))).....(((((((..(((.......))).....)))))))...))))...(((....)))(((((((......))))))).(((((((((.........))))))).)).))....((((((.....((....))......))))).).........((....))..((((((.....((.....))....)))))..((((....(((((((......)))))))......(((.(((((.............
null
rnasstr
2,922
d91e997cdd13c13d3b34ffc4
CAAUAAGCUAAAUAAGGGCGUAUGGCGGAUGCCUAGGCUUUCAGAGGCGAUGAAGGACGCGAUAAGCUGCGAUAAGUAACGGGGAGAAGCACAUAUUUUAUGAUCCGUUAAUUUCCGAAUGGGGCAACCCGGUAUGUUGAAGACAUAUCACCUCGUAAGAGGGGCAAACCCGGUGAACUGAAACAUCUAAGUAACCGGAGGAAGAGAAAACAAUAGUGAUUCCGUUAGUAGUGGCGAGCGAACGCGGAUUAGCCCAAACCAAUACUGUUACGGCAGUAUUGGGGUUGUAGGGCUGCGACAUUAGAAUCUAAGUGAACUAG...
((((((((.......((((((((((.....(((..(((((((((((((.....(((((((........))).....(((((((..(((.......))).....)))))))...))))...(((....)))(((((((.....))))))).((((....)))).))...((((((.....((....))......))))).).........((....))..((((((.....((.....))....)))))..((((....(((((((..........)))))))......(((.(((((.......((((((((((..(((....
null
rnasstr
2,885
9f2c16c42055e199a1994034
CAAUAAGCUAAAUAAGGGCGUAUGGCGGAUGCCUAGGCUUUCAGAGGCGAUGAAGGACGCGAUAAGCUGCGAUAAGUAACGGGGAGAAGCACAUAUUUUAUGAUCCGUUAAUUUCCGAAUGGGGCAACCCGGUAUGUUGAAGACAUAUCACCUCGCAAGAGGGGCAAACCCGGUGAACUGAAACAUCUAAGUAACCGGAGGAAGAGAAAACAAUAGUGAUUCCGUUAGUAGUGGCGAGCGAACGCGGAUUAGCCCAAACCAAUACUGUUACGGCAGUAUUGGGGUUGUAGGGCUGCGACAUUAGAAUCUAAGUGAACUAG...
((((((((.......((((((((((.....(((..(((((((((((((.....(((((((........))).....(((((((..(((.......))).....)))))))...))))...(((....)))(((((((.....))))))).((((....)))).))...((((((.....((....))......))))).).........((....))..((((((.....((.....))....)))))..((((....(((((((..........)))))))......(((.(((((.......((((((((((..(((....
null
rnasstr
2,885
95cf9536d7b5b3906d27a95c
CAAUAAGCUAAAUAAGGGCGUAUGGCGGAUGCCUAGGCUUUCAGAGGCGAUGAAGGACGCGAUAAGCUGCGAUAAGUAACGGGGAGAAGCACAUAUUUUAUGAUCCGUUAAUUUCCGAAUGGGGCAACCCGGUAUGUUGAAGACAUAUCACCUCGUAAGAGGGGCAAACCCGGUGAACUGAAACAUCUAAGUAACCGGAGGAAGAGAAAACAAUAGUGAUUCCGUUAGUAGUGGCGAGCGAACGCGGAUUAGCCCAAACCAAUACUGUUACGGCAGUAUUGGGGUUGUAGGGCUGCGACAUUAGAAUCUAAGUGAACUAG...
((((((((.......((((((((((.....(((..(((((((((((((.....(((((((........))).....(((((((..(((.......))).....)))))))...))))...(((....)))(((((((.....))))))).((((....)))).))...((((((.....((....))......))))).).........((....))..((((((.....((.....))....)))))..((((....(((((((..........)))))))......(((.(((((.......((((((((((..(((....
null
rnasstr
2,877
a680af9fbcfac560b3719a6b
CAAUAAGCUAAAUAAGGGCGUAUGGCGGAUGCCUAGGCUUUCAGAGGCGAUGAAGGACGCGAUAAGCUGCGAUAAGUAACGGGGAGAAGCACAUAUUUUAUGAUCCGUUAAUUUCCGAAUGGGGCAACCCGGUAUGUUGAAGACAUAUCACCCGCAAGGGGGCAAACCCGGUGAACUGAAACAUCUAAGUAACCGGAGGAAGAGAAAACAAUAGUGAUUCCGUUAGUAGUGGCGAGCGAACGCGGAUUAGCCCAAACCAAUACUGUUACGGCAGUAUUGGGGUUGUAGGGCUGCGAGAUUAGCAUCUAAGAGAACUAGAA...
((((((((.......((((((((((.....(((..(((((((((((((.....(((((((........))).....(((((((..(((.......))).....)))))))...))))...(((....)))(((((((.....))))))).(((....))).))...((((((.....((....))......))))).).........((....))..((((((.....((.....))....)))))..((((....(((((((..........)))))))......(((.(((((.....((((((((((((..(((......
null
rnasstr
2,881
292ba1d863a5818a9fbd1c81
CAAUAAGCUAAAUAAGGGCGUAUGGCGGAUGCCUAGGCUUUCAGAGGCGAUGAAGGACGCGAUAAGCUGCGAUAAGUAACGGGGAGAAGCACAUAUUUUAUGAUCCGUUAAUUUCCGAAUGGGGCAACCCAGCAUGUUGAAGACAUGUUACCUAGCAAUAGGGGCAAACCCGGUGAACUGAAACAUCUAAGUAACCGGAGGAAGAGAAAACAAUAGUGAUUCCGUUAGUAGUGGCGAGCGAACGCGGAUUAGCCCAAACCAAUACUGUUACGGCAGUAUUGGGGUUGUAGGGCUGCGACAUUAGAAUCUAAGUGAACUAG...
((((((((.......((((((((((.....(((..(((((((((((((.....(((((((........))).....(((((((..(((.......))).....)))))))...))))...(((....)))(((((((.....))))))).((((....)))).))...((((((.....((....))......))))).).........((....))..((((((.....((.....))....)))))..((((....(((((((..........)))))))......(((.(((((.......((((((((((..(((....
null
rnasstr
2,884
5cbaa5aed6e48354698ab391
CAAUAAGCUAAAUAAGGGCGUAUGGCGGAUGCCUAGGCUUUCAGAGGCGAUGAAGGACGCGAUAAGCUGCGAUAAGUAACGGGGAGAAGCACAUAUUUUAUGAUCCGUUAAUUUCCGAAUGGGGCAACCCAGCAUGUUGAAGACAUGUUACCUAGCAAUAGGGGCAAACCCGGUGAACUGAAACAUCUAAGUAACCGGAGGAAGAGAAAACAAUAGUGAUUCCGUUAGUAGUGGCGAGCGAACGCGGAUUAGCCCAAACCAAUACUGUUACGGCAGUAUUGGGGUUGUAGGGCUGCGACAUUAGAAUCUAAGUGAACUAG...
((((((((.......((((((((((.....(((..(((((((((((((.....(((((((........))).....(((((((..(((.......))).....)))))))...))))...(((....)))(((((((.....))))))).((((....)))).))...((((((.....((....))......))))).).........((....))..((((((.....((.....))....)))))..((((....(((((((..........)))))))......(((.(((((.......((((((((((..(((....
null
rnasstr
2,884
6da13617ffe5259ffcee1758
CAAUAAGCUAAAUAAGGGCGUAUGGCGGAUGCCUAGGCUUUCAGAGGCGAUGAAGGACGCGAUAAGCUGCGAUAAGUAACGGGGAGAAGCACAUAUUUUAUGAUCCGUUAAUUUCCGAAUGGGGCAACCCAGCAUGUUGAAGACAUGUUACCUAGCAAUAGGGGCAAACCCGGUGAACUGAAACAUCUAAGUAACCGGAGGAAGAGAAAACAAUAGUGAUUCCGUUAGUAGUGGCGAGCGAACGCGGAUUAGCCCAAACCAAUACUGUUACGGCAGUAUUGGGGUUGUAGGGCUGCGACAUUAGAAUCUAAGUGAACUAG...
((((((((.......((((((((((.....(((..(((((((((((((.....(((((((........))).....(((((((..(((.......))).....)))))))...))))...(((....)))(((((((.....))))))).((((....)))).))...((((((.....((....))......))))).).........((....))..((((((.....((.....))....)))))..((((....(((((((..........)))))))......(((.(((((.......((((((((((..(((....
null
rnasstr
2,884
c91f7506d87282956dc75ae4
GGGUGCUUGGAUCAAUCUGGUUCAAGCAUUUUGCCAAAGCCAGAAAGAGAAAAGCCCCGGAAAAUAUAUUCAUAUUAACCGAGGCGGACUCAAACCCUAACAAUUUGAUUCUGCCUCCUUAUAAAGGAGCUGUCAAGAAAAUGAACAAAUA
(((.((((..(((((((((((((..((.....))..)))))))))))))..)))))))((.(((((((..)))))).)))((((((((((((((.........))))))))))))))...(((.((............)).))).......
null
rnasstr
151
aa59cea4743808a6eea4eb5a
GGGUGCUUGGAUCAAUCUGGUUCAAGCAUUUUGCCAAAGCCAGAAAGAGAAAAGCCCCGGAAAAUAUAUUCAUAUUAACCGAGGCGGACUCAAACCAUAACAAUUUGAUUCUGCCUCCUUAUAAAGGAGCUGUCAAGAAAAUGAACAAAUA
(((.((((..(((((((((((((..((.....))..)))))))))))))..)))))))((.(((((((..)))))).)))((((((((((((((.........))))))))))))))...(((.((............)).))).......
null
rnasstr
151
46103a76b73efa90913b66c8
ACAAGAACAAUAACAAGCACUGCAACUCAGAAUAAGAACAAGACGAAACGGCUCACGCACAAUAAAAACAAGACGGCGGAGGCGCAGCUAACUGAUUCUUUUGGAGAGGAUGCGUGUUUGGGGCUUGCCCCACGACCAGGCAGAGAACAACAAAAACUGCACUAAAAAGCAGCGCCUGAACUGGUUGGAUCGAAUGAUCAGCGUGACAUCAGCGGCCAAAGCAAUCCGUUUGCUCUUAACCCCUGGAUUAGGGGUCGUCCACAAGCUUUGAGAUUUGUGGGCAGGGCACUCAACAAAAACAAGAAGCCCGGCAUAAAAAC...
................................................((.((((......................)))).))..............(((((.........(((.................(((((((.................(((((......)))))........)))))))........................)))..))))).................(((((.......)))))......................((((((((((..................))))..............
null
rnasstr
396
de75fa1c595ab6bf771e6bf2
ACAAGAACAAUAACAAGCACUGCAACUCAGAAUAAGAACAAGACGAAACGGCUCACGCACAAUAAAAACAAGACGGCGGAGGCGCAGCUAACUGAUUCUUUUGGAGAGGAUGCGUGUUUGGGGCUUGCCCCACGACCAGGCAGAGAACAACAAAAACUGCACUAAAAAGCAGCGCCUGAACUGGUUGGAUCGAUUGAUCAGCAUGACAUCAGCGGCCAAAGCAAUCCGUUUGCUCUUAACCCCUGGAUUGGGGGUCGUCCACAAGCUUUGAGAUUUGUGGGCAGGGCACUCAACAAAAACAAGAAGCCCGGCAUAAAAAC...
................................................((.((((......................)))).))..............(((((.........(((.................(((((((.................(((((......)))))........)))))))........................)))..))))).................(((((.......)))))......................((((((((((..................))))..............
null
rnasstr
396
94ce0009fc05bc2e107c686c
UUGAGGAUUUGCCCGAAUGUGAACUAAAUCACUUCAAAGACGGGGUAAGUCUCAGUAUCAUCAUGAGAGUUAAACCCUCGCCGCCAGACGGUGAGGGUUUUCUUUUGGG
..............(((.((((......)))))))....................................((((((((((((.....)))))))))))).........
null
rnasstr
109
c8ad20b90b18c5fc2652e590
UUGAGGAUUUACCCGAAUGUGAACUAAAUCACUUCAAAGACGGGGUAAGUCUCAGUAUCAUCAUGAGAGUUAAACCCUCGCCGCCAGACGGUGAGGGUUUUCUUUUGGG
..............(((.((((......)))))))....................................((((((((((((.....)))))))))))).........
null
rnasstr
109
187e74ff8e4428020ca80df6
UGGGAUUGCUGAAUUAGAGAUCGGCAUCCUUACAUUCUUUAUACUUUGGAGUUUGAAAAUGUCUCUAAGCGUUGAAGCUAAAGCUAAAAUCGUUUCUGAGUUUGGUCGUGGUACU
......((((((........))))))..................(((((((...........)))))))..............................................
null
rnasstr
115
c10c7d8b2c406d86cca192eb
UUGGAUUGCUGAAUUAGAGAUCGGCAUCCUUACAUUCUUUAUACUUUGGAGUUUGAAAAUGUCUCUAAGCGUUGAAGCUAAAGCUAAAAUCGUUUCUGAGUUUGGUCGUGGUACU
......((((((........))))))..................(((((((...........)))))))..............................................
null
rnasstr
115
68f2f59bf73208b22874f8fd
UGGGAUUGCUGAAUUAGAGAUCGGCAUCCUUACAUUCUUUAUAUUUUGGAGUUUGAAAAUGUCUCUAAGCGUUGAAGCUAAAGCUAAAAUCGUUUCUGAGUUUGGUCGUGGUACU
......((((((........))))))..................(((((((...........)))))))..............................................
null
rnasstr
115
c256fbd0d595834502abf803
UGGGAUUGCUGAAUUAGAGAUCGGCAUCCUUAUAUUCUUUAUACUUUGGAGUUUGAAAAUGUCUCUAAGCGUUGAAGCUAAAGCUAAAAUCGUUUCUGAGUUUGGUCGUGGUACU
......((((((........))))))..................(((((((...........)))))))..............................................
null
rnasstr
115
5e9ab2636901a3d18389cdd1
AUAUACCCAAACAACUUGAAGUUGCAGGUAGGCGGCAAGUGAGUUCAUCCCCAUGAGCAUAGAUAAACUAUGUGAUUGGGGUGAGCGAAUGUAGCCAACACCGCUGCAACUUCAAGUAGGAAGGG
.((((((......(((((((((((((((.....(((.((((.(((((.((.(((....................))).)).)))))...)))))))......))))))))))))))).)))))).
null
rnasstr
125
69c2aa0dae874a8e921fb2cb
UUAUACCCAAACAACUUGAAGUUGCAGGUAGGCGGCAAGUGAGUUCAUCCCCAUGAGCAUAGAUAAACUAUGUGAUUGGGGUGAGCGAAUGUAGCCAACACCGCUGCAACUUCAAAUAGGAAGGG
.((((((......(((((((((((((((.....(((.((((.(((((.((.(((....................))).)).)))))...)))))))......))))))))))))))).)))))).
null
rnasstr
125
e503abae101768b9de2e87da
AAUCAAGCGCGAAAAGGGCGUUUGGUGGAUGCCUUGGCAGUAAGAGGCGAUGAAAGACGUGAUACUCUGCGAUAAGUCAUGGGGAGCUGAGAAUAAGCUUUGAUCCAUGAAUUUCUGAAUGGGGCAACCCACCUGAUACUUUGUUAUUAUUAUCCUUCGGGGUGAUUAAUAAUGAGGUAAACCAGGUAUUUUUAACCUGAAUACAUAGGGUUAAAAAAGCAAACCCGGGGAACUGAAACAUCUAAGUACCCGGAGGAAAGGAAAUCAAUAGAUACUCCCCUAGUAGCGGCGAGCGAACGGGGACCAGCCGAGCUGUGAGU...
((((((((.......((((((((((.....(((..(((((((((((((.....(((((((........))).....(((((((..(((.......))).....)))))))...))))...(((....)))(((((((...........................................))))))).(((((.((((.........)))).))))).))...((((((.....((....))......))))).).........((....))..((((((.....((.....))....)))))..((((..(((((..((...
null
rnasstr
2,830
1c34fd5dc5df7373c27350f0
AAUCAAGCGCGAAAAGGGCGUUUGGUGGAUGCCUUGGCAGUAAGAGGCGAUGAAAGACGUGAUACUCUGCGAUAAGUCAUGGGGAGCUGAGAAUAAGCUUUGAUCCAUGAAUUUCUGAAUGGGGCAACCCACCUGAUACUUUGUUAUUAUUAUCCUUCGGGAUGAUUAAUAAUAAGGUAAACCAGGUAUUUUUAACCUGAAUACAUAGGGUUAAAAAAGCAAACCCGGGGAACUGAAACAUCUAAGUACCCGGAGGAAAGGAAAUCAAUAGAUACUCCCCUAGUAGCGGCGAGCGAACGGGGACCAGCCGAGCUGUAAGU...
((((((((.......((((((((((.....(((..(((((((((((((.....(((((((........))).....(((((((..(((.......))).....)))))))...))))...(((....)))(((((((...........................................))))))).(((((.((((.........)))).))))).))...((((((.....((....))......))))).).........((....))..((((((.....((.....))....)))))..((((..(((((..((...
null
rnasstr
2,831
24d103bcc71722de6abe7a99
AAUCAAGCGCGAAAAGGGCGUUUGGUGGAUGCCUUGGCAGUAAGAGGCGAUGAAAGACGUGAUACUCUGCGAUAAGCCAUGGGGAGCUGAGAAUAAGCUUUGAUCCAUGGAUUUCUGAAUGGGGCAACCCACCUGAUACUUUGUUAUUAUUAUCCUUCGGGGUGAUUAAUAAUGAGGUAAAACAGGUAUUUUUAACCUGAAUACAUAGGGUUAAAAAAGCAAACCCGGGGAACUGAAACAUCUAAGUACCCGGAGGAAAGGAAAUCAAUAGAUACUCCCCUAGUAGCGGCGAGCGAACGGGGACCAGCCGAGCUGUGAGU...
((((((((.......((((((((((.....(((..(((((((((((((.....(((((((........))).....(((((((..(((.......))).....)))))))...))))...(((....)))(((((((...........................................))))))).(((((.((((.........)))).))))).))...((((((.....((....))......))))).).........((....))..((((((.....((.....))....)))))..((((..(((((..((...
null
rnasstr
2,832
01ac4af5bb4a5013bd776592
AAUCAAGCGCGAAAAGGGCGUUUGGUGGAUGCCUUGGCAGUAAGAGGCGAUGAAAGACGUGAUACUCUGCGAUAAGCCAUGGGGAGCUGAGAAUAAGCUUUGAUCCAUGGAUUUCUGAAUGGGGCAACCCACCUGAUACUUUGUUAUUAUUGCCCGUAAGGGCAGCUAAUAAUGAGGUAAAACAGGUAUUUGUAGACUGAAUACAUAGGUUUACAAAAGCAAACCCGGGGAACUGAAACAUCUAAGUACCCGGAGGAAAGGAAAUCAAUAGAUACUCCCCUAGUAGCGGCGAGCGAACGGGGACCAGCCGAGCCUUGAGU...
((((((((.......((((((((((.....(((..(((((((((((((.....(((((((........))).....(((((((..(((.......))).....)))))))...))))...(((....)))(((((((...........................................))))))).(((((.((((.........)))).))))).))...((((((.....((....))......))))).).........((....))..((((((.....((.....))....)))))..((((..(((((..((...
null
rnasstr
2,833
6740f51ed019c8ffb65d59ef
AAUCAAGCGCGAAAAGGGCGUUUGGUGGAUGCCUUGGCAGUAAGAGGCGAUGAAAGACGUGAUACUCUGCGAUAAGCCAUGGGGAGCUGAGAAUAAGCUUUGAUCCAUGGAUUUCUGAAUGGGGCAACCCACCUGAUACUUUGUUAUUAUUGCUCUUCGGAGCAGCUAAUAAUGAGGUAAACCAGGUAUUUAUAACCUGAAUACAUAGGGUUAUAAAAGCAAACCCGGGGAACUGAAACAUCUAAGUACCCGGAGGAAAGGAAAUCAAUAGAUACUCCCCUAGUAGCGGCGAGCGAACGGGGACCAGCCGAGCUGUGAGU...
((((((((.......((((((((((.....(((..(((((((((((((.....(((((((........))).....(((((((..(((.......))).....)))))))...))))...(((....)))(((((((...........................................))))))).(((((.((((.........)))).))))).))...((((((.....((....))......))))).).........((....))..((((((.....((.....))....)))))..((((..(((((..((...
null
rnasstr
2,831
7962bd4d17389cd776e0b2fb
AAUCAAGCGCGAAAAGGGCGUUUGGUGGAUGCCUUGGCAGUAAGAGGCGAUGAAAGACGUGAUACUCUGCGAUAAGCCAUGGGGAGCUGAGAAUAAGCUUUGAUCCAUGGAUUUCUGAAUGGGGCAACCCACCUGAUACUUUGUUAUUAUUGCCCGUAAGGGCAGCUAAUAAUGAGGUAAAACAGGUAUUUGUAAACUGAAUACAUAGGUUUACAAAAGCAAACCCGGGGAACUGAAACAUCUAAGUACCCGGAGGAAAGGAAAUCAAUAGAUACUCCCCUAGUAGCGGCGAGCGAACGGGGACCAGCCGAGCCUUGAGU...
((((((((.......((((((((((.....(((..(((((((((((((.....(((((((........))).....(((((((..(((.......))).....)))))))...))))...(((....)))(((((((...........................................))))))).(((((.((((.........)))).))))).))...((((((.....((....))......))))).).........((....))..((((((.....((.....))....)))))..((((..(((((..((...
null
rnasstr
2,833
e295ae23b7a7f84bdaad3efd
AAUCAAGCGCGAAAAGGGCGUUUGGUGGAUGCCUUGGCAGUAAGAGGCGAUGAAAGACGUGAUACUCUGCGAUAAGCCAUGGGGAGCUGAGAAUAAGCUUUGAUCCAUGGAUUUCUGAAUGGGGCAACCCACCUGAUACUUUGUUAUUAUUGCCCGUAAGGGCAGCUAAUAAUGAGGUAAAACAGGUAUUUGUAAACUGAAUACAUAGGUUUACAAAAGCAAACCCGGGGAACUGAAACAUCUAAGUACCCGGAGGAAAGGAAAUCAAUAGAUACUCCCCUAGUAGCGGCGAGCGAACGGGGACCAGCCGAGCCUUGAGU...
((((((((.......((((((((((.....(((..(((((((((((((.....(((((((........))).....(((((((..(((.......))).....)))))))...))))...(((....)))(((((((...........................................))))))).(((((.((((.........)))).))))).))...((((((.....((....))......))))).).........((....))..((((((.....((.....))....)))))..((((..(((((..((...
null
rnasstr
2,833
6702298b00421e0acbda831e
AAUCAAGCGCGAAAAGGGCGUUUGGUGGAUGCCUUGGCAGUAAGAGGCGAUGAAAGACGUGAUACUCUGCGAUAAGCCAUGGGGAGCUGAGAAUAAGCUUUGAUCCAUGGAUUUCUGAAUGGGGCAACCCACCUGAUACUUUGUUGUUAUUGCCGCUUCGGUGGCAGCUAACAGCGGGGUAAACCAGGUAUUUUUAACCUGAAUACAUAGGGUUAAAAAAGCAAACCCGGGGAACUGAAACAUCUAAGUACCCGGAGGAAAGGAAAUCAAUAGAUACUCCCCUAGUAGCGGCGAGCGAACGGGGACCAGCCGAGCUGUAA...
((((((((.......((((((((((.....(((..(((((((((((((.....(((((((........))).....(((((((..(((.......))).....)))))))...))))...(((....)))(((((((.............................................))))))).(((((.((((.........)))).))))).))...((((((.....((....))......))))).).........((....))..((((((.....((.....))....)))))..((((..(((((.....
null
rnasstr
2,837
2948773d93bb58554793724f
CGGUGAUGUCUCCUUACCGUUAUCAAUGGAGGCACUCGGCCAUGCCGUGGGUGGGGACGAUGACGGUCCUGCCACCUUAGACGCCAGUCGUCGAGGGUGUGGUGUGAGGGCGGGUUAGAUGCCCG
......(((((((..............)))))))((((((((((((..((((((((..........)))...)))))..((((.....))))...)))))))).))))..(((((.....)))))
null
rnasstr
125
290b26337c919a145c27bf3a
CGGUGAUGUCUCCUUACCGUUAUCAAUGGAGGCACUCGGCCAUGCCGUGGGUGGGGACGAUGACGGUCCUGCCACCUUAGACGCCCGUCGUCGAGGGUGUGGUGUGAGGGCGGGUUAGAUGCCCG
......(((((((..............)))))))((((((((((((..((((((((..........)))...)))))..((((.....))))...)))))))).))))..(((((.....)))))
null
rnasstr
125
73a075067b02eae79f7ce329
CGGUGAUGUCUCCUUACCGUUAUCAAUGGAGGCACUCGGCCAUGCCGUGGGUGGGGACGAUGACGGUCCUGCCACCUUAGACGCCCGUCGUCGAGGGUGUGGUGUGAGGGCGGGUUAGAUGCGCG
......(((((((..............)))))))((((((((((((..((((((((..........)))...)))))..((((.....))))...)))))))).))))..(((((.....)))))
null
rnasstr
125
72d59e5c99c18108cc2154a9
UCGAUUAUUACCGCCAUUCCAGCAGUGGCGGGUUAGCCGACGACCAAACAGAAACCCGCCCUCGAGGCGGGUUUU
..........(((((((.......)))))))....................(((((((((.....))))))))).
null
rnasstr
75
315a60e6b908bb72a3a2f33e
GCGAUUAUUACCGCCAUUCCAGCAGUGGCGGGUUAGCCGACGACCAAACAGAAACCCGCCCUCGAGGCGGGUUUC
..........(((((((.......)))))))....................(((((((((.....))))))))).
null
rnasstr
75
887816719929a299ce1b29e5
GCGAUUAUUACCGCCAUUCCAGCAGUGGCGGGUUAGCCGACGACCAAACAGAAACCCGCCCUCGAGGCGGGUUUU
..........(((((((.......)))))))....................(((((((((.....))))))))).
null
rnasstr
75
a9ae5431c5ac9858fade77ac
CGUUAUGGCGGCUGUGCGCGGGAGACCUUCGGGUCUGUCGGGCUCGUUUACCCCGGUUUUCCAACCUGCGUACGGCUGCCACCCCC
.....((((((((((((((((((((((....)))))(((((...........))))).......))))))))))))))))).....
null
rnasstr
86
5624c0839254b436bb25bd8c
CGUUAUGGCGGCUGUGCGCGGGAGACCUUCGGGUCUGUCGGGCUCGUUUACCCCGGUUUUCCAACCUGCGUACGGCUGCCACCCCU
.....((((((((((((((((((((((....)))))(((((...........))))).......))))))))))))))))).....
null
rnasstr
86
fadd82a0726ec75f4251e6df
GAUCAAGCAAGGAAGGGCGCAGGGAGGAUGCCUGGCCACACUGUACUGAAGAAGGACGUGCCAAACAGCGAAAUGCGACGGUGAGCCGUAAGGAGGCAAAGACCCGUCGGUGUCCGAAUGGGGGAACCCGGCAGCCGGAAGGCUGUCAUCCCGAAAGGGAGAGGUACCCGGGGAACUGAAACAUCUAAGUACCCGGAGGAAAAGAAAACAACAGUGAUUCCCCGAGUAGCGGCGAGCGAAAGGGGAGAAAGCCCAAACCGGAGAGAUCCGGGGUAGUAGGACCGUCAAAAGAGUGGGAAAGACACAGCAGAAUGUACAGG...
((((((((......((((((((((.....(((..(((((((((((((.....(((((((........))).....(((((((..(((.......))).....)))))))...))))...(((....)))(((((((....))))))).((((....)))).))...((((((.....((....))......))))).).........((....))..((((((.....((.....))....)))))...((((....((((((()))))))......(((.(((((......(((((((((((((.(((...(((((......
null
rnasstr
2,885
1b5cf2c8481d6fac667644f3
GAUCAAGCAAGGAAGGGCGCAGGGAGGAUGCCUGGCCACACUGUACUGAAGAAGGACGUGCCAAACAGCGAAAUGCGACGGUGAGCCGUAAGGAGGCAAAGACCCGUCGGUGUCCGAAUGGGGGAACCCGGCAGCCGGAAGGCUGUCAUCCCGAAAGGGAGAGGUACCCGGGGAACUGAAACAUCUAAGUACCCGGAGGAAAAGAAAACAACAGUGAUUCCCCGAGUAGCGGCGAGCGAAAGGGGAGAAAGCCCAAACCGGAGAGAUCCGGGGUAGUAGGACCGUCAAAAGAGUGGGAAAGACACAGCAGAAUGUACAGG...
((((((((......((((((((((.....(((..(((((((((((((.....(((((((........))).....(((((((..(((.......))).....)))))))...))))...(((....)))(((((((....))))))).((((....)))).))...((((((.....((....))......))))).).........((....))..((((((.....((.....))....)))))...((((....((((((()))))))......(((.(((((......(((((((((((((.(((...(((((......
null
rnasstr
2,885
c7b540481821562cb41c32b3
GAUCAAGCAAGGAAGGGCGCAGGGAGGAUGCCUGGCCACACUGUACUGAAGAAGGACGUGCCAAACAGCGAAAUGCGACGGUGAGCCGUAAGGAGGCAAAGACCCGUCGGUGUCCGAAUGGGGGAACCCGGCAGCCAGAAGGCUGUCAUCCCGAAAGGGAGAGGUACCCGGGGAACUGAAACAUCUAAGUACCCGGAGGAAAAGAAAACAACAGUGAUUCCCCGAGUAGCGGCGAGCGAAAGGGGAGGAAGCCCAAACCGGAGAGAUCCGGGGUAGUAGGACCGUCAAAAGAGUGGGAAAGACACAGCAGAAUGUACAGG...
((((((((......((((((((((.....(((..(((((((((((((.....(((((((........))).....(((((((..(((.......))).....)))))))...))))...(((....)))(((((((....))))))).((((....)))).))...((((((.....((....))......))))).).........((....))..((((((.....((.....))....)))))...((((....((((((()))))))......(((.(((((......(((((((((((((.(((...(((((......
null
rnasstr
2,884
6207543b060e1f1645b4f69b
GAUCAAGCAAGGAAGGGCGCAGGGAGGAUGCCUGGCCACACUGUACUGAAGAAGGACGUGCCAAACAGCGAAAUGCGACGGUGAGCCGUAAGGAGGCAAAGACCCGUCGGUGUCCGAAUGGGGGAACCCGGCAGCCAGAAGGCUGUCAUCCCGAAAGGGAGAGGUACCCGGGGAACUGAAACAUCUAAGUACCCGGAGGAAAAGAAAACAACAGUGAUUCCCCGAGUAGCGGCGAGCGAAAGGGGAGGAAGCCCAAACCGGAGAGAUCCGGGGUAGUAGGACCGUCAAAAGAGUGCGGAUGACACAGCAGAAUGUACAGG...
((((((((......((((((((((.....(((..(((((((((((((.....(((((((........))).....(((((((..(((.......))).....)))))))...))))...(((....)))(((((((....))))))).((((....)))).))...((((((.....((....))......))))).).........((....))..((((((.....((.....))....)))))...((((....((((((()))))))......(((.(((((......(((((((((((((.(((...(((((......
null
rnasstr
2,884
ed506dd8b7909fef99768f2a
GAUCAAGCAAGGAAGGGCGCAGGGAGGAUGCCUGGCCACACUGUACUGAAGAAGGACGUGCCAAACAGCGAAAUGCGACGGUGAGCCGUAAGGAGGCAAAGACCCGUCGGUGUCCGAAUGGGGGAACCCGGCAGCCAGAAGGCUGUCAUCCCGAAAGGGAGAGGUACCCGGGGAACUGAAACAUCUAAGUACCCGGAGGAAAAGAAAACAACAGUGAUUCCCCGAGUAGCGGCGAGCGAAAGGGGAGGAAGCCCAAACCGGAGAGAUCCGGGGUAGUAGGACCGUCAAAAGAGUGGGAAAGACACAGCAGAAUGUACAGG...
((((((((......((((((((((.....(((..(((((((((((((.....(((((((........))).....(((((((..(((.......))).....)))))))...))))...(((....)))(((((((....))))))).((((....)))).))...((((((.....((....))......))))).).........((....))..((((((.....((.....))....)))))...((((....((((((()))))))......(((.(((((......(((((((((((((.(((...(((((......
null
rnasstr
2,884
1cf913fa96dfc6e6e9200a15
GAUCAAGCAAGGAAGGGCGCAGGGAGGAUGCCUGGCCACACUGUACUGAAGAAGGACGUGCCAAACAGCGAAAUGCGACGGUGAGCCGUAAGGAGGCAAAGACCCGUCGGUGUCCGAAUGGGGGAACCCGGCAGCCAGAAGGCUGUCAUCCCGAAAGGGAGAGGUACCCGGGGAACUGAAACAUCUAAGUACCCGGAGGAAAAGAAAACAACAGUGAUUCCCCGAGUAGCGGCGAGCGAAAGGGGAGGAAGCCCAAACCGGAGAGAUCCGGGGUAGUAGGACCGUCAAAAGAGUGCGGAUGACACAGCAGAAUGUACAGG...
((((((((......((((((((((.....(((..(((((((((((((.....(((((((........))).....(((((((..(((.......))).....)))))))...))))...(((....)))(((((((....))))))).((((....)))).))...((((((.....((....))......))))).).........((....))..((((((.....((.....))....)))))...((((....((((((()))))))......(((.(((((......(((((((((((((.(((...(((((......
null
rnasstr
2,885
fb7dff3f2b5ee1c263d75ced
GAUCAAGCAAGGAAGGGCGCAGGGAGGAUGCCUGGCCACACUGUACUGAAGAAGGACGUGCCAAACAGCGAAAUGCGACGGUGAGCCGUAAGGAGGCAAAGACCCGUCGGUGUCCGAAUGGGGGAACCCGGCAGCCAGAAGGCUGUCAUCCCGAAAGGGAGAGGUACCCGGGGAACUGAAACAUCUAAGUACCCGGAGGAAAAGAAAACAACAGUGAUUCCCCGAGUAGCGGCGAGCGAAAGGGGAGAAAGCCCAAACCGGAGAGAGCCGGGGUAGUAGGACCGUCAAAAGAGUGGGAAAGACACAGCAGAAUGUACAGG...
((((((((......((((((((((.....(((..(((((((((((((.....(((((((........))).....(((((((..(((.......))).....)))))))...))))...(((....)))(((((((....))))))).((((....)))).))...((((((.....((....))......))))).).........((....))..((((((.....((.....))....)))))...((((....((((......))))......(((.(((((......(((((((((((((.(((...(((((......
null
rnasstr
2,884
08eb544df0583bd9860d9d54
CGCUUAUUUUUAUGGGUAUUGGUUUAGCCACAGGCGCGCCUGAUACCCCACAGGCGCCCUAGUAAUCCAGGGUCGCCACCAGACAGUUUCUCGAAACCCCCGGUCGGCCUCCCGACCGGGGG
...........((((((((((((...((.....))..))).)))))))))..(((((((..........))).))))......(((....)))...(((((((((((....)))))))))))
null
rnasstr
122
4f632d848097c3243c7a428f
CGCUUAUUUUUAUGGGUAUUGGUUUAGCCACAGGCGCGCCUGAUACCCCACAGGCGCCCUAGUAACCCAGGGUCGCCACCAGACAGUUUCUCGAAACCCCCGGUCGGCCUCCCGACCGGGGG
...........((((((((((((...((.....))..))).)))))))))..(((((((..........))).))))......(((....)))...(((((((((((....)))))))))))
null
rnasstr
122
3ae00a6aaa0fca6c4280f1f6
UUGUUUGUUUCUAUGAGCGUUCGGUGGAUGCCUUGGCAUCAGGGGCCGAUGAAGGACGUGGUGGCCUGCGAUAUUCCUCGGGGAGCCGGCUGACGGGCUGUGAUCCGAGGGUUUCCGAAUGGGGGGACCCGGCGCCCGUCAUGGGGCGUCACUCGUACCUGAAUUCAUAGGGUGCGGGGGGUGACGCGGGGAAGUGAAACAUCUCAGUACCCGCAGGAGAAGAUAUUCCGUGAGUAGUGGCGAGCGAAAGCGGAUGAUGGUUAAACCGUUGUCGUGUGAUACCCGGCAGGGGUUGCGGCGGCGGUGUUGUGGGGCGUUCC...
((((((((......((((((((((.....(((..(((((((((((((.....(((((((........))).....(((((((..(((........))).....)))))))...))))...(((....)))(((((((......))))))).(((((((((.........))))))))).))...((((((.....((....))......))))).).........((((((.....((.....))....)))))..(.(((....(((((((.........................)))))))......(((..(((((...
null
rnasstr
3,169
43ec40e3075890de8a81b7a7
UUGUUUGUUUCUAUGAGCGUUCGGUGGAUGCCUUGGCAUCAGGGGCCGAUGAAGGACGUGGUGGCCUGCGAUAUUCCUCGGGGAGCCGGCUGACGGGCUGUGAUCCGAGGGUUUCCGAAUGGGGGGACCCGGCGCCCGUCAUGGGGCGUCACUCGUACCUGAAUUCAUAGGGUGCGGGGGGUGACGCGGGGAAGUGAAACAUCUCAGUACCCGCAGGAGAAGAUAUUCCGUGAGUAGUGGCGAGCGAAAGCGGAUGAUGGUUAAACCGUUGUCGUGUGAUACCCGGCAGGGGUUGCGGCGGCGGUGUUGUGGGGCGUUCC...
((((((((......((((((((((.....(((..(((((((((((((.....(((((((........))).....(((((((..(((........))).....)))))))...))))...(((....)))(((((((......))))))).(((((((((.........))))))))).))...((((((.....((....))......))))).).........((((((.....((.....))....)))))..(.(((....(((((((.........................)))))))......(((..(((((...
null
rnasstr
3,172
7a4d296a837c42aee5a91d2e
UCGCCUAUGGUAUAAUUUAAAACGUAGAAAAGUUUAAGGCGGUGGCUAACUCUUGUAAAAUGGGGUGAUGCCAAUGUUUUUGUUUGGGCUUUCCCUAGAAAGGAAAACUCAUGAGCAUUUAUGAGGCACUGAUGUUUGCAUUAGCUUUUGCAACUCUUGUUUUAAAAAUCUCGUCAAACAAAAA
.........................................(((((..............((((((((.((..............)).))))))))................(((.((((.....)))).)))................)))))....((((.((.......)).)))).....
null
rnasstr
184
aff4b7437ed17d0f5d9e5e04
UCACAUAUGGUAUAAUUUAAAGCGUAGAAAAGUUUAAGGCGGUGGCUAACUCUUGUAAAAUGGGGUGAUGCCAAUGUUUUUUGUUUGGGCUUUCCCUAGAAAGGAAAACUCAUGAGCAUUUAUGAGGCACUGAUGUUUGCAUUAGCUUUUGCAACUCUUGUUUUAAAAAUCUCGUCAAACAAAAA
.........................................(((((..............((.(((((.((................)).)))))))................(((.((((.....)))).)))................)))))....((((.((.......)).)))).....
null
rnasstr
185
9d4e4296e3fd5fc5f7ce58a3
CUUUUUGGUGGCCAUGCGCAGGGCCUUUUCGGAGGCGCCGGCUCCGAUGCCCGGUCUACCAACCUUCGUAUGGCCACCGCCCAA
.....((((((((((((((((((((((....)))))(((((.........))))).......))))))))))))))))).....
null
rnasstr
84
f70751b6c6dff77891c9a3ee
CCUUUUGGUGGCCAUGCGCAGGGCCUUUUCGGAGGCGCCGGCUCCGAUGCCCGGUCUACCAACCUUCGUAUGGCCACCGCCCAA
.....((((((((((((((((((((((....)))))(((((.........))))).......))))))))))))))))).....
null
rnasstr
84
b7fb3a4318d081b3479c3616
UUAAAAGAGGAAAAAUUUGAACUGAUUGCAACCUCGUAAAAAAAAUGCUAAAGCAGAACUU
.....(((((....(((......))).....))))).........................
null
rnasstr
61
70720cd0bfb3e9c4c2c3ba32
UAAAAAGAGGAAAAAUUUGAACUGAUUGCAACCUCGUAAAAAAAUGCUAAAGCAGAACUU
.....(((((....(((......))).....)))))........................
null
rnasstr
60
a802aa7bbb3975ffb0b5965d
CAACUUGUGGAAAAAUUUGGCUGCUUGCAACCACACAAAAAAAUGCUAAAACGCUCAAA
.....(((((....(((.....))).....)))))........................
null
rnasstr
59
3535cc7f873cd42b2a3364fb
CAACUUGUGGAAAAAUUUGGCUGCUUGCAACCACACAAAAAAAUGCUAAAACGCUAAAA
.....(((((....(((.....))).....)))))........................
null
rnasstr
59
End of preview. Expand in Data Studio

SHIFU-Corpus

A leakage-audited RNA secondary-structure benchmark: 254,123 sequences pooled from six public databases, deduplicated and certified with zero exact and zero near-duplicate train/test leaks, and split into family-disjoint train / validation / test partitions. A high score here reflects generalization, not a leaked test set.

This is the benchmark behind SHIFU: an integrated framework for deep learning of RNA secondary structure (Galvez and Vicens, Vicens Lab, University of Houston). Code, evaluation utilities, and the foundational model backbones are at https://github.com/Vicens-Lab/LMR.

Why this dataset

Most RNA secondary-structure models look excellent on their home benchmark and collapse on the next one, because most benchmarks measure memorization, not generalization: near-identical sequences bleed across the train/test boundary. SHIFU-Corpus rebuilds the foundation so a number means something. Splits are made family-aware (family-disjoint train/test), and the partition is certified offline with a full audit suite (MinHash near-duplicate detection at k=6, 128 permutations, Jaccard >= 0.90 clustering) reporting 0 exact + 0 cluster leaks.

Sources

Pooled and normalized from six public databases, each of which retains its own license: RNASSTR, bpRNA, RNAStrAlign, ArchiveII, DSSR, and RNAsolo. Cite and honor the original sources when you use the data.

Record fields

Each record carries:

  • the normalized RNA sequence;
  • the raw and pseudoknot-stripped dot-bracket structures, plus the parsed pair lists;
  • per-record statistics: length, GC, pair density, canonical-pair fraction, has_pk_raw;
  • the source dataset and source identifier;
  • three tiered Rfam family/clan labels (rfam_pred_*, rfam_gold_*, rfam_active_*) with the active-policy column and a per-record confidence scalar (rfam_active_conf);
  • for records with Infernal hits, the full evidence set (rfam_best_overall, rfam_topk, rfam_best_per_clan, rfam_pred_evalue/bits/inc, rfam_n_hits);
  • PDB-derived records additionally carry pdb_id, chain_id, method, resolution, and release_date.

Splits and evaluation slices

Family-aware 80/10/10 train / validation / test. Four pre-computed evaluation slices are provided as UID-only manifests for stratified reporting:

slice what it isolates
test_standard the standard held-out test set
test_family_heldout families unseen in training
test_clan_heldout Rfam clans unseen in training
test_unlabeled_ood out-of-distribution records with no confident family label

Provable integrity (audit suite)

The split integrity is verifiable offline from the shipped audit files: global_summary.json, split_summary.json, dedup_report.json, leakage_report.json, label_coverage.json, tiered_label_summary.json, edge_case_counters.json, parity_diagnostics.json, manifest_hashes.json (per-split composition, near-duplicate report, and byte-level hashes).

Load it 

from huggingface_hub import snapshot_download
path = snapshot_download("GaboG7/SHIFU-Corpus", repo_type="dataset")

or

huggingface-cli download GaboG7/SHIFU-Corpus --repo-type dataset --local-dir ./shifu_corpus

The paper's scoring and Trifecta evaluation code (so your numbers stay comparable) are released as integrable utilities in the GitHub repo under utils/.

License

SHIFU-Corpus is a derived dataset. Each source database (RNASSTR, bpRNA, RNAStrAlign, ArchiveII, DSSR, RNAsolo) retains its original license; honor those terms when using the data. The SHIFU annotations, splits, and audit artifacts are released for research use alongside the paper.

Citation

This work is not yet published. A citation will be added when it is available. Placeholder:

@misc{shifu_corpus,
  title  = {SHIFU: an integrated framework for deep learning of RNA secondary structure},
  author = {Galvez, Gabriel and Vicens, Quentin},
  note   = {Manuscript in preparation. Citation to be updated.},
  year   = {TODO}
}

Vicens Lab, Center for Nuclear Receptors and Cell Signaling, University of Houston.
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