Datasets:

Ethan-Lin
/

PTMBenchmark-ProtSyntax

accession stringlengths 6 10	entry_name stringlengths 6 16	organism stringclasses 723 values	taxid int64 292 3.36M	protein_length int64 2 36k	cluster_id stringlengths 6 10	split stringclasses 3 values	cluster_size int64 1 857
Z4YN62	Z4YN62_MOUSE	Mouse	10,090	350	D4A5H7	train	5
Q5XJV7	SETD5_MOUSE	Mouse	10,090	1,441	D4A2W7	train	4
Q96LB2	MRGX1_HUMAN	Human	9,606	322	Q7TN44	train	23
P43246	MSH2_HUMAN	Human	9,606	934	P25847	test	10
Q8C2Q3	RBM14_MOUSE	Mouse	10,090	669	Q8C2Q3	train	4
Q96LA9	MRGX4_HUMAN	Human	9,606	322	Q7TN44	train	23
Q96LB3	IFT74_HUMAN	Human	9,606	600	Q96LB3	train	3
Q96LA8	ANM6_HUMAN	Human	9,606	375	Q6NZB1	train	2
P43250	GRK6_HUMAN	Human	9,606	576	P32866	train	14
Q5XJV6	LMTK3_MOUSE	Mouse	10,090	1,424	Q96Q04	train	2
P43247	MSH2_MOUSE	Mouse	10,090	935	P25847	test	10
P43244	MATR3_RAT	Rat	10,116	845	A8MXP9	train	11
P43245	MDR1_RAT	Rat	10,116	1,277	Q9QY30	train	18
P43275	H11_MOUSE	Mouse	10,090	213	Q4AB94	train	33
Q96L93	KI16B_HUMAN	Human	9,606	1,317	E7FLY0	train	5
Q5XJE5	LEO1_MOUSE	Mouse	10,090	667	Q641X2	test	3
P43274	H14_MOUSE	Mouse	10,090	219	Q4AB94	train	33
Q8C2Q8	Q8C2Q8_MOUSE	Mouse	10,090	274	P38077	train	3
P43276	H15_MOUSE	Mouse	10,090	223	Q4AB94	train	33
Q96LA5	FCRL2_HUMAN	Human	9,606	508	Q96P31	train	2
P43268	ETV4_HUMAN	Human	9,606	484	P41161	train	9
P43267	SOX15_MOUSE	Mouse	10,090	231	O60248	train	2
P43251	BTD_HUMAN	Human	9,606	523	P43251	val	8
P43253	PI2R_RAT	Rat	10,116	416	P43253	train	10
P43252	PI2R_MOUSE	Mouse	10,090	415	P43253	train	10
Q96LA6	FCRL1_HUMAN	Human	9,606	429	Q96RD9	val	3
Q96L96	ALPK3_HUMAN	Human	9,606	1,705	Q96L96	train	3
Q5XJV5	Q5XJV5_MOUSE	Mouse	10,090	2,069	Q5XJV5	train	6
Q96L94	SNX22_HUMAN	Human	9,606	193	Q96L94	train	4
Q96LD4	TRI47_HUMAN	Human	9,606	638	D3ZA22	train	5
Q5XJY5	COPD_MOUSE	Mouse	10,090	511	B0YIW6	train	9
P43241	CDX2_MOUSE	Mouse	10,090	311	Q99626	train	5
P43243	MATR3_HUMAN	Human	9,606	847	A8MXP9	train	11
Q96LD1	SGCZ_HUMAN	Human	9,606	299	Q8BX51	val	9
P43234	CATO_HUMAN	Human	9,606	321	P43234	train	2
P43235	CATK_HUMAN	Human	9,606	329	Q95029	train	22
Q96LC9	BMF_HUMAN	Human	9,606	184	Q8K589	val	3
Q8C2P3	DUS1L_MOUSE	Mouse	10,090	475	Q9VPM1	train	5
Q5XKE0	MYPC2_MOUSE	Mouse	10,090	1,136	Q3UIK0	train	26
Q96LI6	HSFY1_HUMAN	Human	9,606	401	Q96LI6	test	3
P43146	DCC_HUMAN	Human	9,606	1,447	P97798	train	9
Q96LI5	CNO6L_HUMAN	Human	9,606	555	Q8IMX1	train	7
P43155	CACP_HUMAN	Human	9,606	626	P28329	train	7
Q96LJ7	DHRS1_HUMAN	Human	9,606	313	Q96LJ7	train	4
P43219	GIPR_RAT	Rat	10,116	455	B2RAN4	train	13
Q96LD8	SENP8_HUMAN	Human	9,606	212	Q9D2Z4	train	3
P43220	GLP1R_HUMAN	Human	9,606	463	B2RAN4	train	13
Q96LB8	PGRP4_HUMAN	Human	9,606	373	Q0VB07	train	7
Q96LC7	SIG10_HUMAN	Human	9,606	697	Q96RL6	train	9
Q96LB9	PGRP3_HUMAN	Human	9,606	341	Q0VB07	train	7
Q5XJY4	PARL_MOUSE	Mouse	10,090	377	A0A1W2PP11	val	6
P43378	PTN9_HUMAN	Human	9,606	593	P43378	train	3
P43403	ZAP70_HUMAN	Human	9,606	619	P43405	test	6
Q96L91	EP400_HUMAN	Human	9,606	3,159	Q96L91	train	7
Q5XIW8	SNUT1_RAT	Rat	10,116	806	Q95TU2	train	4
P43360	MAGA6_HUMAN	Human	9,606	314	P43364	train	24
P43362	MAGA9_HUMAN	Human	9,606	315	P43364	train	24
P43363	MAGAA_HUMAN	Human	9,606	369	P43364	train	24
P43358	MAGA4_HUMAN	Human	9,606	317	P43364	train	24
P43357	MAGA3_HUMAN	Human	9,606	314	P43364	train	24
Q8C2S7	AMGO3_MOUSE	Mouse	10,090	508	Q8C2S7	train	3
P43365	MAGAC_HUMAN	Human	9,606	314	P43364	train	24
P43366	MAGB1_HUMAN	Human	9,606	347	A2A9R3	train	15
P43364	MAGAB_HUMAN	Human	9,606	429	P43364	train	24
P43407	SDC2_MOUSE	Mouse	10,090	202	P34901	train	8
P43425	GBG7_RAT	Rat	10,116	68	A0A0N4SW28	val	28
P43427	GTR5_RAT	Rat	10,116	502	Q8IRI6	train	33
P43428	G6PC1_RAT	Rat	10,116	357	P43428	train	5
P43429	GATA1_RAT	Rat	10,116	413	P43429	train	3
P43406	ITAV_MOUSE	Mouse	10,090	1,044	A0A0G2K1E2	train	13
P43405	KSYK_HUMAN	Human	9,606	635	P43405	test	6
Q96L73	NSD1_HUMAN	Human	9,606	2,696	Q96L73	train	6
Q5XIV2	MARHA_RAT	Rat	10,116	790	Q8NA82	test	3
P43487	RANG_HUMAN	Human	9,606	201	F6WQW2	train	9
Q8C310	ROBO4_MOUSE	Mouse	10,090	1,012	Q8C310	train	3
Q5XIU9	PGRC2_RAT	Rat	10,116	217	O15173	train	3
P43432	IL12B_MOUSE	Mouse	10,090	335	P43432	test	2
P43430	MCPT8_MOUSE	Mouse	10,090	247	P28293	train	27
P43431	IL12A_MOUSE	Mouse	10,090	215	P29459	train	3
P43404	ZAP70_MOUSE	Mouse	10,090	618	P43405	test	6
P43304	GPDM_HUMAN	Human	9,606	727	A2AQR0	train	8
Q96L92	SNX27_HUMAN	Human	9,606	541	Q96L92	val	5
P43278	H10_RAT	Rat	10,116	194	Q4AB94	train	33
P43303	IL1R2_RAT	Rat	10,116	416	P43303	train	3
P43307	SSRA_HUMAN	Human	9,606	286	Q7TPJ0	train	9
P43320	CRBB2_HUMAN	Human	9,606	205	P53674	val	19
Q5XJ19	Q5XJ19_HUMAN	Human	9,606	171	Q9VL06	train	9
P43308	SSRB_HUMAN	Human	9,606	183	Q9VUZ0	train	4
P43277	H13_MOUSE	Mouse	10,090	221	Q4AB94	train	33
P43322	NRG1_RAT	Rat	10,116	662	H0YBA3	train	5
P43354	NR4A2_HUMAN	Human	9,606	598	Q6ZMM6	train	13
P43353	AL3B1_HUMAN	Human	9,606	468	A0A0C4DHC8	train	25
P43352	RAD52_MOUSE	Mouse	10,090	420	D3ZZL1	train	6
Q5XIX3	DCR1C_RAT	Rat	10,116	698	Q8K4J0	train	3
Q8C2S5	FBXL5_MOUSE	Mouse	10,090	690	Q9UKA1	train	4
P43355	MAGA1_HUMAN	Human	9,606	309	P43364	train	24
P43356	MAGA2_HUMAN	Human	9,606	314	P43364	train	24
P43329	HRPA_ECOLI	Ecoli	83,333	1,300	P43329	train	1
P43351	RAD52_HUMAN	Human	9,606	418	D3ZZL1	train	6
P43345	TLX1_MOUSE	Mouse	10,090	332	P43345	train	5

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Dataset Details

Dataset Description

Curated by: Yiyu Lin
Funded by : ChangZhou University,China
Shared by : Yiyu Lin
Language(s) (PLM): Python,R,Pytorch
License: Apach-2.0

Dataset Sources

Repository: https://huggingface.co/datasets/Ethan-Lin/PTMBenchmark-ProtSyntax
Github: https://github.com/Yuqiu-rgb/ProtSyntax
Paper: ProtSyntax(preprint),DOI:https://doi.org/10.64898/2026.07.18.739331

Uses

Dataset Card Contact

Email:s24060854024@smail.cczu.edu.cn

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