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The dataset generation failed
Error code: DatasetGenerationError
Exception: TypeError
Message: int() argument must be a string, a bytes-like object or a real number, not 'NoneType'
Traceback: Traceback (most recent call last):
File "/usr/local/lib/python3.14/site-packages/datasets/builder.py", line 1531, in _prepare_split_single
for key, record in generator:
^^^^^^^^^
File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 613, in wrapped
for item in generator(*args, **kwargs):
~~~~~~~~~^^^^^^^^^^^^^^^^^
File "/usr/local/lib/python3.14/site-packages/datasets/packaged_modules/webdataset/webdataset.py", line 127, in _generate_examples
for example_idx, example in enumerate(self._get_pipeline_from_tar(tar_path, tar_iterator)):
~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/local/lib/python3.14/site-packages/datasets/packaged_modules/webdataset/webdataset.py", line 32, in _get_pipeline_from_tar
for filename, f in tar_iterator:
^^^^^^^^^^^^
File "/usr/local/lib/python3.14/site-packages/datasets/utils/track.py", line 49, in __iter__
for x in self.generator(*self.args):
~~~~~~~~~~~~~~^^^^^^^^^^^^
File "/usr/local/lib/python3.14/site-packages/datasets/utils/file_utils.py", line 1400, in _iter_from_urlpath
with xopen(urlpath, "rb", download_config=download_config, block_size=0) as f:
~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/local/lib/python3.14/site-packages/datasets/utils/file_utils.py", line 977, in xopen
file_obj = fs.open(paths[0], mode)
File "<string>", line 3, in open
File "/usr/local/lib/python3.14/unittest/mock.py", line 1176, in __call__
return self._mock_call(*args, **kwargs)
~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^
File "/usr/local/lib/python3.14/unittest/mock.py", line 1180, in _mock_call
return self._execute_mock_call(*args, **kwargs)
~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^
File "/usr/local/lib/python3.14/unittest/mock.py", line 1247, in _execute_mock_call
result = effect(*args, **kwargs)
File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 786, in wrapped
tracker.files[urlpath] = {"read": 0, "size": int(f.size)}
~~~^^^^^^^^
TypeError: int() argument must be a string, a bytes-like object or a real number, not 'NoneType'
The above exception was the direct cause of the following exception:
Traceback (most recent call last):
File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 1369, in compute_config_parquet_and_info_response
parquet_operations, partial, estimated_dataset_info = stream_convert_to_parquet(
~~~~~~~~~~~~~~~~~~~~~~~~~^
builder, max_dataset_size_bytes=max_dataset_size_bytes
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
)
^
File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 948, in stream_convert_to_parquet
builder._prepare_split(split_generator=splits_generators[split], file_format="parquet")
~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/local/lib/python3.14/site-packages/datasets/builder.py", line 1393, in _prepare_split
for job_id, done, content in self._prepare_split_single(
~~~~~~~~~~~~~~~~~~~~~~~~~~^
gen_kwargs=gen_kwargs, job_id=job_id, **_prepare_split_args
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
):
^
File "/usr/local/lib/python3.14/site-packages/datasets/builder.py", line 1571, in _prepare_split_single
raise DatasetGenerationError("An error occurred while generating the dataset") from e
datasets.exceptions.DatasetGenerationError: An error occurred while generating the datasetNeed help to make the dataset viewer work? Make sure to review how to configure the dataset viewer, and open a discussion for direct support.
ch1.tif image | ch2.tif image | ch3.tif image | ch4.tif image | ch5.tif image | meta.json dict | __key__ string | __url__ string |
|---|---|---|---|---|---|---|---|
{
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{
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"source_dataset": "idr00... | sample_p00000000004_sid68082078_s1_i25412073_r1_c0 | hf://datasets/AnnyZijing/dataset-2-20@f22047b705365ac4513a9f1ec82c2dceba74012f/filtered_projection_20TB_nested-r041-000000.tar | |||||
{
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"source_dataset": "idr00... | sample_p00000000005_sid68082078_s1_i25412073_r1_c1 | hf://datasets/AnnyZijing/dataset-2-20@f22047b705365ac4513a9f1ec82c2dceba74012f/filtered_projection_20TB_nested-r041-000000.tar | |||||
{
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"source_dataset": "idr00... | sample_p00000000006_sid68082078_s1_i25412073_r1_c2 | hf://datasets/AnnyZijing/dataset-2-20@f22047b705365ac4513a9f1ec82c2dceba74012f/filtered_projection_20TB_nested-r041-000000.tar | |||||
{
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"source_dataset": "idr00... | sample_p00000000007_sid68082078_s1_i25412073_r1_c3 | hf://datasets/AnnyZijing/dataset-2-20@f22047b705365ac4513a9f1ec82c2dceba74012f/filtered_projection_20TB_nested-r041-000000.tar | |||||
{
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"source_dataset": "idr00... | sample_p00000000008_sid68082078_s1_i25412073_r2_c0 | hf://datasets/AnnyZijing/dataset-2-20@f22047b705365ac4513a9f1ec82c2dceba74012f/filtered_projection_20TB_nested-r041-000000.tar | |||||
{
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{
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"source_dataset": "idr00... | sample_p00000000010_sid68082078_s1_i25412073_r2_c2 | hf://datasets/AnnyZijing/dataset-2-20@f22047b705365ac4513a9f1ec82c2dceba74012f/filtered_projection_20TB_nested-r041-000000.tar | |||||
{
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"source_dataset": "idr00... | sample_p00000000011_sid68082078_s1_i25412073_r2_c3 | hf://datasets/AnnyZijing/dataset-2-20@f22047b705365ac4513a9f1ec82c2dceba74012f/filtered_projection_20TB_nested-r041-000000.tar | |||||
{
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"source_dataset": "idr00... | sample_p00000000012_sid68082078_s1_i25412073_r3_c0 | hf://datasets/AnnyZijing/dataset-2-20@f22047b705365ac4513a9f1ec82c2dceba74012f/filtered_projection_20TB_nested-r041-000000.tar | |||||
{
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"source_dataset": "idr00... | sample_p00000000013_sid68082078_s1_i25412073_r3_c1 | hf://datasets/AnnyZijing/dataset-2-20@f22047b705365ac4513a9f1ec82c2dceba74012f/filtered_projection_20TB_nested-r041-000000.tar | |||||
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{
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{
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"source_path": "/mnt/deepcad_nfs_rw/000-LM-dataset-preprocessed/idr0033-rohban-pathways/20170214-original/images/41755/taoe005-u2os-72h-cp-a-au00044858_d08_s6_w5dd8ee0fc-8f1f-429a-9b57-06a6ab192c7c_merged.tif",
... | sample_p00000000020_sid579649_s1_i25131687_r1_c1 | hf://datasets/AnnyZijing/dataset-2-20@f22047b705365ac4513a9f1ec82c2dceba74012f/filtered_projection_20TB_nested-r041-000000.tar | |||||
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"source_dataset": "idr0043",
"method_label": "Bright-field mic... | sample_p00000000025_sid54508010_s1_i24306742_r0_c4 | hf://datasets/AnnyZijing/dataset-2-20@f22047b705365ac4513a9f1ec82c2dceba74012f/filtered_projection_20TB_nested-r041-000000.tar | |||
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"source_dataset": "idr0043",
"method_label": "Bright-field mic... | sample_p00000000026_sid54508010_s1_i24306742_r0_c5 | hf://datasets/AnnyZijing/dataset-2-20@f22047b705365ac4513a9f1ec82c2dceba74012f/filtered_projection_20TB_nested-r041-000000.tar | |||
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"source_item_id": 25430525,
"source_id": 68075065,
"source_path": "/mnt/deepcad_nfs_rw/000-LM-dataset-preprocessed/idr0090-ashdown-malaria/norm_20200701-gcloud#190129_asexual_withGFP#NDExp_WellF09_Point0002_Seq0386_z001_mergedC.tif",
"source_dataset": "idr00... | sample_p00000000091_sid68075065_s1_i25430525_r0_c3 | hf://datasets/AnnyZijing/dataset-2-20@f22047b705365ac4513a9f1ec82c2dceba74012f/filtered_projection_20TB_nested-r041-000000.tar |
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