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AnDolgorukova
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lafa-protein-embeddings

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LAFA Protein Embeddings

Precomputed protein sequence embeddings used by the LAFA longitudinal protein-function annotation pipeline.

The cache is keyed by protein sequence and is independent of a particular LAFA release. Existing embeddings are reused across releases; embeddings for new or changed sequences can be computed by the submitted pipeline and added to the same cache.

Encoders

esm2_t36_3B_UR50D
prot_t5
esm1b_650M

The files are stored in the same Parquet layout used directly by the prediction pipeline.

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