PoreFM
Collection
Multi-modal Oxford Nanopore foundation models for DNA and RNA modification detection. • 8 items • Updated
PoreFM-DNA prototype
PoreFM prototype model for Oxford Nanopore DNA modification detection using fitted residual effects.
Model version: 0.1.0. Chemistry: R10.4.1 (E8.2, 400 bps). Embedding dimension: 384.
| File | Contents |
|---|---|
R10.4.1_prototype.pt |
Complete backbone and fitted effects model in one inference bundle. |
Class order: A, C, G, T, 5mC, 5hmC, 6mA.
Model configuration and preprocessing are embedded in the checkpoints. Setup and usage are documented in the PoreFM code repository.
manifest.json records artifact identities and tensor fingerprints. SHA256SUMS verifies checkpoint downloads. Tensor fingerprints are independent of descriptive metadata; file hashes identify exact bytes. Documentation-only changes leave the model version unchanged.
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WGLab/PoreFM-DNA