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litscrape_id
string
source_row_index
int64
binder_id
string
source_publication
string
target
string
label
int64
binding_affinity_nm
null
target_sequence
string
binder_sequence
string
af2_model_name
string
af3_model_name
string
af2_complex_plddt
float64
af2_ptm
float64
af2_iptm
float64
af2_pae
float64
af2_ipae
float64
af2_min_ipae
float64
af3_ptm
float64
af3_iptm
float64
af3_chain_A_plddt
float64
af3_chain_A_pae
float64
af3_chain_A_ptm
float64
af3_chain_A_iptm
float64
af3_chain_B_plddt
float64
af3_chain_B_pae
float64
af3_chain_B_ptm
float64
af3_chain_B_iptm
float64
af3_iptm_A_B
float64
status
string
error
null
litscrape_000000
0
InfluenzaHA_binder_design_27
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
AAEKVREIGEEMAKEYEDDEKRKKAVEFTTEEMVRAVEDPSVSLFEARQRALTYGAILGKEALEAAKETFERMKKAVEAA
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.8189
0.4858
0.1332
0.6822
0.8524
0.5748
0.307784
0.10405
50.073757
19.673449
0.355654
0.10405
77.869174
2.032892
0.866971
0.10405
0.10405
ok
null
litscrape_000001
1
InfluenzaHA_binder_design_72
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
AEAEKEANKQKANDEVMRAIEAADRLQEAGKVEEAEKLLQEAILAAAKGDVEETKKKADELEALL
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7516
0.5178
0.2718
0.5877
0.6954
0.4024
0.393697
0.134645
54.425002
16.840328
0.446154
0.134645
74.88463
2.489047
0.791869
0.134645
0.134645
ok
null
litscrape_000002
2
InfluenzaHA_binder_design_5
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
AEEAKKEIEKYKEQYDRTVKLADELKAKADELVEKGHNVAAEVYYKIAADMLEDGAEYFERKAEEAEDPEVAEALRKLAEELRERAKEYREKLEEVRRG
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.8133
0.4318
0.1164
0.6786
0.8812
0.5669
0.307488
0.087521
47.774352
20.221059
0.330318
0.087521
76.928591
2.597474
0.845487
0.087521
0.087521
ok
null
litscrape_000003
3
InfluenzaHA_binder_design_14
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
AEFEKVAEEALKLAEEMMKDPETMAIGAILKDTVKDLKAKVDEVAAKDPANAEAAAKKATESLKKQVEMAKEVAAKQKAE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7402
0.4596
0.1
0.7284
0.8997
0.6091
0.32645
0.078471
52.462825
18.828494
0.380647
0.078471
73.980593
2.903239
0.79487
0.078471
0.078471
ok
null
litscrape_000004
4
InfluenzaHA_binder_design_9
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
AEKVEEEVKKAAEEIGKEKGARVNVRAEGNTITVEAETLDTLMDATTRAALIAAKAGLKVTGKLT
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6781
0.467
0.092
0.7578
0.9035
0.6385
0.3168
0.077721
49.370491
19.727659
0.359561
0.077721
70.620946
2.393892
0.778167
0.077721
0.077721
ok
null
litscrape_000005
5
InfluenzaHA_binder_design_18
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
AIAENAAKVAAEAVKKGSILAAETTADMIVDLNPEQGRKMAEVLREIAEKAPEEVKEDIERVAEYAEKKVEEAE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.761
0.4516
0.0983
0.7265
0.894
0.6398
0.311633
0.077724
50.519088
19.537386
0.357035
0.077724
77.250951
1.904516
0.855296
0.077724
0.077724
ok
null
litscrape_000006
6
InfluenzaHA_binder_design_91
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
AKAAAEMDKRILKAAIDQGNDKTYKLYKEEMEKKAKEHPEEYKKALEEIEKYEK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7091
0.5013
0.1011
0.7626
0.8893
0.6512
0.367965
0.093886
53.367119
18.46159
0.410417
0.093886
70.895903
2.561007
0.708693
0.093886
0.093886
ok
null
litscrape_000007
7
InfluenzaHA_binder_design_87
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
AKKEAEEKAKEIEKKAQEALNGDVNEAVKIAFEINVIVASSKPEEQLAMAKALEKEAQRVRDAGGSFIVESILTNSAKYAKEKYEK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6871
0.4623
0.0944
0.7352
0.9067
0.6788
0.358757
0.081139
54.142557
17.930386
0.42272
0.081139
74.477515
3.381055
0.798374
0.081139
0.081139
ok
null
litscrape_000008
8
InfluenzaHA_binder_design_54
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
ATAAKMMAESIAKSMLKDPNVTAADAEKLFKLYVEAMSKIGEEAAKVAKEIGEKAVAEIKEREEKKAEAAK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.4932
0.4628
0.0963
0.8139
0.913
0.6886
0.317449
0.071288
48.351968
19.615922
0.361556
0.071288
45.739296
15.087636
0.322076
0.071288
0.071288
ok
null
litscrape_000009
9
InfluenzaHA_binder_design_86
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
ATQKITDLVMKGLQLYAQGNKEEAKKYFEEAIELAKKAGLIGSAMVVEAIYKEES
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.5439
0.4827
0.1067
0.7814
0.8905
0.641
0.398071
0.079261
53.671066
17.338124
0.447734
0.079261
59.669153
5.654099
0.592618
0.079261
0.079261
ok
null
litscrape_000010
10
InfluenzaHA_binder_design_58
RFDiffusion
InfluenzaHA
1
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
DALSKMMDAVTLYAIGTARGDEEAFKKAEELIKELKKEGAQKEAEMAEKVIKNIR
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6771
0.4587
0.1049
0.7563
0.8834
0.6197
0.371872
0.085287
54.224469
17.914641
0.413317
0.085287
71.264778
2.047495
0.782912
0.085287
0.085287
ok
null
litscrape_000011
11
InfluenzaHA_binder_design_65
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
DDATKALQLVIKAQGALEKGDKEAAEKYLKEAKELGKKDVTAKIIAENAEKKFNS
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6826
0.4994
0.0971
0.7629
0.8909
0.6608
0.413662
0.081049
56.663204
16.990317
0.466766
0.081049
72.453843
2.173176
0.75637
0.081049
0.081049
ok
null
litscrape_000012
12
InfluenzaHA_binder_design_38
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
DEAVQKAIELAVKAISAKIRGDEEEAKKYVDEVEKLAKETGNFVVKTLAEQARKFL
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6906
0.4678
0.0936
0.7698
0.9028
0.6675
0.327413
0.073851
49.545171
19.429544
0.365178
0.073851
71.479602
1.946767
0.778524
0.073851
0.073851
ok
null
litscrape_000013
13
InfluenzaHA_binder_design_79
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
DEFVKEALAEIAEKQKKEAEEKAKEYADDPQKVAEVYREAAKFAQMLADANPNAKKVKEIAEELLKKAEEIEKK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7407
0.461
0.1025
0.737
0.8979
0.6157
0.344441
0.075575
52.004747
18.603545
0.39833
0.075575
74.726351
2.737188
0.799334
0.075575
0.075575
ok
null
litscrape_000014
14
InfluenzaHA_binder_design_47
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
DELLARIEKLKEEAKELEEEGKIAEVLLVSQALERAEAALAAGDTQTAQFLVNLSETVINQVKN
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6377
0.4644
0.0923
0.7643
0.9016
0.6834
0.3283
0.075886
51.171773
19.598806
0.37241
0.075886
69.351025
2.680911
0.744869
0.075886
0.075886
ok
null
litscrape_000015
15
InfluenzaHA_binder_design_11
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
DIEEKIEEAIKALKEGEFDKAIELAEEIAKKGDNKTKAYALLAAEMARKGEGTLAIMVLQQMKEK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.736
0.4868
0.0927
0.76
0.9093
0.7186
0.407155
0.085739
56.888351
16.87625
0.467024
0.085739
75.357318
2.176889
0.814735
0.085739
0.085739
ok
null
litscrape_000016
16
InfluenzaHA_binder_design_73
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
DNKLKTFILISEALAKSYGVKAKIEIKDGKVHITLSGDKERAEALKKQLQWIADSLGIEVEIKIE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7339
0.4713
0.0967
0.7436
0.8914
0.6293
0.362075
0.078243
53.373078
18.228566
0.412258
0.078243
72.687607
2.281355
0.800683
0.078243
0.078243
ok
null
litscrape_000017
17
InfluenzaHA_binder_design_75
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
DRELNEALLELMVLTAKNPEATEGLLAALEAVDIAKASGREEDRERALRILRLAKEAAENPERLEELIEKAKREAEELRARYEA
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7243
0.4591
0.1037
0.7148
0.8893
0.6499
0.285464
0.092927
46.214403
20.998481
0.321349
0.092927
75.24225
2.120575
0.861426
0.092927
0.092927
ok
null
litscrape_000018
18
InfluenzaHA_binder_design_71
RFDiffusion
InfluenzaHA
1
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
EAEKEIQEEVKKIEKEYPGLKIKVKLEGDTFYVSCSGGSFEKCIEAITRLAIVAAKLGYKLEVEW
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7355
0.4646
0.0948
0.7534
0.9035
0.661
0.329443
0.077262
52.168577
19.000385
0.374546
0.077262
73.932791
2.248373
0.808122
0.077262
0.077262
ok
null
litscrape_000019
19
InfluenzaHA_binder_design_61
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
EALELVKKAAEDPSKRAEYVTQVIWQLAKKTGDLVKAVEVGMQITMHLVRGDDEEALELVKKAAE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7216
0.4743
0.1032
0.7399
0.8882
0.6266
0.379279
0.076242
55.35512
17.704221
0.43315
0.076242
73.209047
1.946153
0.818813
0.076242
0.076242
ok
null
litscrape_000020
20
InfluenzaHA_binder_design_13
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
EEEARKRAEEVAKEASKLSPVEAVKKASEFAQELVKQGHLEVAQEVIRRTIEG
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.5009
0.4653
0.0944
0.7897
0.8937
0.6923
0.359281
0.070845
53.734669
18.28405
0.399929
0.070845
61.090867
3.323912
0.612846
0.070845
0.070845
ok
null
litscrape_000021
21
InfluenzaHA_binder_design_82
RFDiffusion
InfluenzaHA
1
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
EEEEIKEKAKEVVDYAESLGLKVVKVEGDTIVVAADNLEQVEKAVEVAVHAARLGLKVEVVLK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7061
0.5022
0.0855
0.7744
0.9176
0.7542
0.272282
0.073818
46.505349
21.43574
0.304812
0.073818
71.321107
2.472946
0.782073
0.073818
0.073818
ok
null
litscrape_000022
22
InfluenzaHA_binder_design_7
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
EEEEKAKKEALEAQSELVSTAIFAAALKPEKKQEIIDLLFEALKKLQELMAEGEEGTKEAKKLLEEAKKKIEEIFKK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6976
0.4481
0.0923
0.7472
0.9097
0.6495
0.323659
0.07968
51.383866
19.237701
0.37346
0.07968
71.81465
2.759491
0.778217
0.07968
0.07968
ok
null
litscrape_000023
23
InfluenzaHA_binder_design_48
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
EEEERKEVIEEVEEEMEEALKEAKELAKESKILAATTLATKAAMLAAKYPEYKDIIMNAAKKGAAMILETGDVEKAVEEAKKEIIEAIKKK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7808
0.4538
0.1036
0.6997
0.8897
0.6335
0.316148
0.08079
51.500561
19.312138
0.373297
0.08079
76.083856
2.605279
0.823774
0.08079
0.08079
ok
null
litscrape_000024
24
InfluenzaHA_binder_design_41
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
EEEIEKLFKETLKKLDEAEKIIKKMKDNQTPRMQLQMVKTAVEQAKKEKNAVTYLKVALIYLDELIERVKKKGDEEAAKKLEEVKKGIEKLLETIEEKK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7901
0.4571
0.1066
0.7048
0.898
0.6486
0.312338
0.084331
50.018206
19.41672
0.372691
0.084331
77.136551
2.879782
0.837371
0.084331
0.084331
ok
null
litscrape_000025
25
InfluenzaHA_binder_design_59
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
EEEKELEKKIKEAVEKGLKEANNLINELVKKGDIKGAIRAWEILREITG
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.4939
0.4652
0.0925
0.8057
0.9102
0.736
0.404871
0.07039
55.521048
16.697009
0.448989
0.07039
59.115286
5.401502
0.426491
0.07039
0.07039
ok
null
litscrape_000026
26
InfluenzaHA_binder_design_44
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
EEEKKKLISKADTALFVAAQIAEESGTEEEKRVAEAARKAIEEGGEAARRALELAEREPNVSGVIRMTIQQAVEYYEKAEKV
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7824
0.4341
0.1066
0.7062
0.884
0.6227
0.319516
0.078923
51.29731
19.136989
0.370026
0.078923
77.006631
2.431026
0.846922
0.078923
0.078923
ok
null
litscrape_000027
27
InfluenzaHA_binder_design_43
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
EEERRLAREVAEEAVRAAKELGTALALVVESLAREMLRSGLSAATLARQLAQTITAAGGEEAKEKAAEIVARAEARLAA
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6967
0.4396
0.1003
0.7246
0.8915
0.6612
0.339954
0.07325
53.119667
18.461137
0.39566
0.07325
74.355488
2.682066
0.805423
0.07325
0.07325
ok
null
litscrape_000028
28
InfluenzaHA_binder_design_95
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
EIKVEINGQASEAVSLAIFYAAKGKKLTIITNSDEALAMIKVLSEAIPLVKAEKA
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.5606
0.4839
0.0933
0.7832
0.9003
0.7135
0.311193
0.07564
49.891793
20.205469
0.345817
0.07564
64.47809
3.086535
0.636611
0.07564
0.07564
ok
null
litscrape_000029
29
InfluenzaHA_binder_design_68
RFDiffusion
InfluenzaHA
1
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
EKIKEIKEKVEKKAKEVGVDKVEVEKEGDTVKVKVESDDILAVMDVATEAALLAAKAGYKIEVEL
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6937
0.4838
0.0933
0.76
0.9041
0.6493
0.313497
0.075475
49.53668
19.645417
0.354786
0.075475
72.642338
2.410088
0.78753
0.075475
0.075475
ok
null
litscrape_000030
30
InfluenzaHA_binder_design_42
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
EKKEEAAEKIKKKAEEIAAKSSEKAAQAIRFLATLAVSALKNGTAELAKILVEEAAREYVKTLADDAEGAKAVEETAKEIVEILEEVE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7826
0.435
0.0964
0.7113
0.9013
0.6404
0.3541
0.079445
53.811668
17.83959
0.421388
0.079445
78.483178
2.297516
0.862515
0.079445
0.079445
ok
null
litscrape_000031
31
InfluenzaHA_binder_design_50
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
EKKQKKDELVNKMVQAIMKGNKEEAKKYAKEAIKLAEEIGDKATIMTIQIYLKEAE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7069
0.4928
0.0998
0.7618
0.8918
0.6657
0.412321
0.088035
56.610545
17.053884
0.464988
0.088035
72.793707
2.209471
0.771218
0.088035
0.088035
ok
null
litscrape_000032
32
InfluenzaHA_binder_design_92
RFDiffusion
InfluenzaHA
1
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
ELKEKVLKIIEKGKEKGDATGAINEVTKLMTEAGVDSSTIFQVQLAILEYYVNPEKGKKKIEEIL
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7554
0.4723
0.0991
0.7399
0.8893
0.6413
0.355865
0.079551
53.301993
18.590738
0.403811
0.079551
74.92565
1.923519
0.812506
0.079551
0.079551
ok
null
litscrape_000033
33
InfluenzaHA_binder_design_53
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
ELSKEAKKLLEEGKKLAEAGDKEGAKRKFEEALVAAARAGDQELANEALQAAIEAL
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6692
0.4914
0.0942
0.7741
0.9022
0.6965
0.390288
0.075717
54.636992
16.969862
0.439717
0.075717
69.361389
2.544109
0.727444
0.075717
0.075717
ok
null
litscrape_000034
34
InfluenzaHA_binder_design_63
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
ESKTIAELLVADSLYNEAVKMVKEAAKISEEKLKETAEGYKKLLQMLADVGTEEGKKYATEKAEEILKLAEELI
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6604
0.4489
0.1012
0.7329
0.8864
0.6347
0.310792
0.081124
48.005088
20.319212
0.355674
0.081124
71.770471
2.989292
0.765887
0.081124
0.081124
ok
null
litscrape_000035
35
InfluenzaHA_binder_design_80
RFDiffusion
InfluenzaHA
1
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
GEAQYQEGKEYAKKIIEESKDPKVAEFTLNLRADILRSLGYQEQAKAVEETLKEE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6603
0.483
0.1069
0.755
0.8804
0.6281
0.395147
0.077006
54.973215
17.680022
0.444601
0.077006
67.609037
2.675184
0.733643
0.077006
0.077006
ok
null
litscrape_000036
36
InfluenzaHA_binder_design_30
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
GEEIVKKAKEAMDKAERASDITKAAQKYMNEAAKAGDQKAVLEIFEYMEKKL
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.733
0.4857
0.0928
0.7749
0.902
0.6658
0.322819
0.084293
49.146178
19.580816
0.356217
0.084293
72.557942
1.966388
0.785037
0.084293
0.084293
ok
null
litscrape_000037
37
InfluenzaHA_binder_design_39
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
GQEARDDVEFYIGMARRIIDQLEKNKNANESQAIAVKLIVEALTEEALRVATPELQEEVEKRAEELRKRIEEVSEKIKK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7331
0.4293
0.1043
0.7087
0.8789
0.5901
0.284223
0.087427
46.836731
20.748962
0.325408
0.087427
72.304601
2.414307
0.820061
0.087427
0.087427
ok
null
litscrape_000038
38
InfluenzaHA_binder_design_57
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
GTEEAKEQVKKIAEETKKKLEEKYKKFKSNSDIKIGDYIKEVLDIYFENAKKMKALADKYPEVKPVVLEEMGKIVNFIESMFN
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7509
0.4399
0.0983
0.7268
0.9045
0.6517
0.300549
0.083637
49.746467
19.75835
0.346649
0.083637
73.963889
2.670337
0.807435
0.083637
0.083637
ok
null
litscrape_000039
39
InfluenzaHA_binder_design_94
RFDiffusion
InfluenzaHA
1
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
IKLKLSAPNILQTMDLVIKAAMLGAKWKLTSNLELIVETDGDEEKMKELIEFASSMPGVKWEVL
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.727
0.4551
0.0955
0.7436
0.891
0.5963
0.283167
0.081504
47.855942
20.745103
0.316037
0.081504
72.5779
2.265749
0.797513
0.081504
0.081504
ok
null
litscrape_000040
40
InfluenzaHA_binder_design_3
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
KEEKIKKAREEAEKTDEETGKLLKEAAERMEESPSAFTALIEGADEAGKAGNPEAAIFLLQLAAE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7118
0.4557
0.0981
0.7436
0.8919
0.6307
0.285782
0.082221
46.87326
21.258285
0.320268
0.082221
73.856799
2.119201
0.805755
0.082221
0.082221
ok
null
litscrape_000041
41
InfluenzaHA_binder_design_76
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
KVIEVIEEAKKKAEKEGKKSLAIQLEEAVRIAKEYSPQLGAVWALEAAKNISEEWEKYIKDAIEN
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.723
0.4859
0.0943
0.754
0.9039
0.6735
0.380111
0.077194
55.597585
17.546093
0.436188
0.077194
73.145326
2.136219
0.792375
0.077194
0.077194
ok
null
litscrape_000042
42
InfluenzaHA_binder_design_37
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
MAETLKKTYELMIESETNPSIKQMIAQNFANQATALGETELAAEIQKEIEKM
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6655
0.4714
0.0933
0.7762
0.8996
0.6724
0.351618
0.069147
52.530984
18.785864
0.390672
0.069147
68.051236
2.580795
0.717044
0.069147
0.069147
ok
null
litscrape_000043
43
InfluenzaHA_binder_design_24
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
MDEAAKIILEYAKKIAEKFGQEAASKAFSRLVLTAAVTKSAEAVRKEGEKLIEEA
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6398
0.4607
0.1004
0.7652
0.89
0.6536
0.384237
0.078186
52.652781
17.665187
0.429041
0.078186
67.094845
2.550421
0.718536
0.078186
0.078186
ok
null
litscrape_000044
44
InfluenzaHA_binder_design_35
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
MEAAKKALEELKELNKKYNGKSVEYDEGKNVIYASHAGSPEELVNFIKDAIKITLKYGVSFHLVS
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.636
0.4464
0.0906
0.7633
0.9034
0.67
0.339395
0.079588
51.494526
18.798552
0.38563
0.079588
69.500785
3.103643
0.728433
0.079588
0.079588
ok
null
litscrape_000045
45
InfluenzaHA_binder_design_28
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
MEARDEMIVKAMAKALGAKYEKKDGKFIIYTSSENDKQVVELISKALGIDVEVIVE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.683
0.4406
0.0953
0.7576
0.8863
0.625
0.317087
0.079088
51.654777
19.752631
0.351477
0.079088
71.374846
2.543171
0.76204
0.079088
0.079088
ok
null
litscrape_000046
46
InfluenzaHA_binder_design_74
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
MEEARKAVEKKLKELEEKGVVKQYSISGNTAMVLVDTSTEENREAAKELKEFAEKQGIFAIVHPV
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7213
0.4732
0.0968
0.747
0.8942
0.6434
0.34242
0.077153
51.399942
18.829762
0.387169
0.077153
73.338457
2.162144
0.791533
0.077153
0.077153
ok
null
litscrape_000047
47
InfluenzaHA_binder_design_84
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
MEEKAKEVAEKVRAYGEAKGVLVGIRVEGDTVYVEAKSLEATMDLGMYAALVAAEAGVKAEARQV
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7159
0.4353
0.0978
0.7414
0.8901
0.6069
0.285491
0.075851
47.598116
20.641451
0.319629
0.075851
72.592571
2.165144
0.800794
0.075851
0.075851
ok
null
litscrape_000048
48
InfluenzaHA_binder_design_20
RFDiffusion
InfluenzaHA
1
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
MEKEKELKEYAEKIKKEIGDIESVEVKDGKILVKAKKITDKTVDAIMKLTVKAARLGFKVEVELV
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6373
0.4663
0.0919
0.763
0.9015
0.6638
0.339132
0.077837
51.311202
19.25167
0.384547
0.077837
71.452727
2.554773
0.747483
0.077837
0.077837
ok
null
litscrape_000049
49
InfluenzaHA_binder_design_78
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
MENLNKAVLLAAQAGQEAHQKAVLAAAMFQSGKVDEGYKLFIEAAEEAGKDPKTKELAEKMKEYAKKAYEEAKKEQE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7411
0.4553
0.0943
0.7374
0.9068
0.6785
0.376847
0.076177
54.722298
17.625156
0.440801
0.076177
75.692
2.430719
0.803428
0.076177
0.076177
ok
null
litscrape_000050
50
InfluenzaHA_binder_design_21
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
METVTVTGDWDSLFEKVEKEVQKGKKVVLSPKNITNIMVKKIVEVLTGKKIEVVD
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.3684
0.4575
0.0909
0.8321
0.9092
0.7297
0.318032
0.065609
50.057782
19.596142
0.353936
0.065609
48.023914
8.245926
0.360564
0.065609
0.065609
ok
null
litscrape_000051
51
InfluenzaHA_binder_design_10
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
MFKVKVEGDEEAVNKVVEYAEKKGYVVSKEGNVAVLEAKTIQEAMDIITYAAIAGAKATLLP
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.738
0.4394
0.0964
0.7487
0.8935
0.6577
0.312303
0.08741
49.600349
19.94933
0.347669
0.08741
74.251432
2.170864
0.795225
0.08741
0.08741
ok
null
litscrape_000052
52
InfluenzaHA_binder_design_12
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
MIKVSFPADPEAFEAAKKWAEEKGYTARKEGDKVVVEVDNLLEAQELTTKMALLGVKVELEE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6857
0.4668
0.0931
0.7641
0.9012
0.6738
0.310836
0.074794
49.680846
20.320332
0.349501
0.074794
74.533031
2.364639
0.769497
0.074794
0.074794
ok
null
litscrape_000053
53
InfluenzaHA_binder_design_51
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
MKEKVNEIINEAFSKSKEEAKKLLAEAAKEFSDDKAATVSLLTAMSMITGISFDEALEYYNKYKS
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7089
0.469
0.1032
0.742
0.8882
0.6091
0.358513
0.074358
53.141131
18.343616
0.407705
0.074358
73.811785
2.224316
0.824894
0.074358
0.074358
ok
null
litscrape_000054
54
InfluenzaHA_binder_design_64
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
MKEYPKVDTEEEAIKVANEAAEEGVKAKITTTNILVRMAALTQAAINGIEIEVVP
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.3481
0.4329
0.1046
0.8238
0.8918
0.6336
0.338902
0.101825
50.347127
18.908456
0.375739
0.101825
38.988216
12.811677
0.381622
0.101825
0.101825
ok
null
litscrape_000055
55
InfluenzaHA_binder_design_6
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
MKLLEVSLKAVQIAQEYGASIKDIEIEGDTIKITFKEKNEASEKAAEEAKKFAEEKGVKLEFEYE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7134
0.4431
0.0981
0.7491
0.8969
0.6492
0.354498
0.079442
53.132623
18.26555
0.403704
0.079442
72.99429
2.206982
0.795341
0.079442
0.079442
ok
null
litscrape_000056
56
InfluenzaHA_binder_design_17
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
MMVEALKKAQTLIAASTDQKDVIYIFETLVEGINSGDIEGAMKEIEARVAAS
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.5017
0.4559
0.0921
0.8009
0.9034
0.6659
0.311842
0.069445
48.911544
20.017806
0.344147
0.069445
63.398184
2.924685
0.656303
0.069445
0.069445
ok
null
litscrape_000057
57
InfluenzaHA_binder_design_81
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
MREEARAQARMYAQMALAAKDKRTQELLLDSMLEEGKKRGEEDIAKEIAEETRKKL
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6678
0.442
0.0915
0.7676
0.8985
0.6657
0.31851
0.073635
47.836566
19.905949
0.353874
0.073635
68.346634
2.437693
0.74126
0.073635
0.073635
ok
null
litscrape_000058
58
InfluenzaHA_binder_design_22
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
MSAVVTGVDEEMKKRLTEKAKELGATVKAEGDKITLEADDVLTLMELVTEAALLGGKLESVG
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7241
0.4475
0.1153
0.733
0.8714
0.5847
0.342067
0.107723
52.794739
18.841188
0.384131
0.107723
70.702298
2.366622
0.764206
0.107723
0.107723
ok
null
litscrape_000059
59
InfluenzaHA_binder_design_67
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
MSVTVTSDKSEELVLAVREAAEKGVEITVISPDKIAVQLAVEYAKQLGIKAKGVV
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7087
0.4808
0.0888
0.7668
0.8994
0.678
0.314367
0.068212
49.02784
19.908979
0.348731
0.068212
72.382552
2.154258
0.769407
0.068212
0.068212
ok
null
litscrape_000060
60
InfluenzaHA_binder_design_31
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
MTPIQLAMDYLIKAGFLEARAKQNPSEAGEAAKKLEELLEEVEKDKDKLTQEWYEQVKKYIEEHIEKLRKVAEEL
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.756
0.4283
0.1053
0.7156
0.8803
0.6077
0.293621
0.082166
47.761114
20.092189
0.332602
0.082166
74.447244
2.264891
0.833229
0.082166
0.082166
ok
null
litscrape_000061
61
InfluenzaHA_binder_design_89
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
MVETVYVKSKEEALKAAKEAKEKGVELVFTSDDIDIGMEGVIEAALLGIKGKYEK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.3809
0.464
0.0921
0.8237
0.9086
0.7491
0.369964
0.070968
53.418323
18.03663
0.413881
0.070968
44.642741
10.11851
0.388862
0.070968
0.070968
ok
null
litscrape_000062
62
InfluenzaHA_binder_design_62
RFDiffusion
InfluenzaHA
1
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
MWTIVAKGSEEQLEELKKKAEELGEEAKIEGDELIIKSDNFDNAMELATEAAILGVLKDIKM
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7396
0.4377
0.099
0.7396
0.8836
0.5497
0.294532
0.076443
49.111358
20.144542
0.328176
0.076443
75.701795
1.993232
0.811561
0.076443
0.076443
ok
null
litscrape_000063
63
InfluenzaHA_binder_design_8
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
MYEVVLKGTRAQAVAVEVAAKLLGAEGEAVGDEVKIKTETKEKKEKLIKLAKELGAEVVEEK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7124
0.4545
0.0925
0.7554
0.8992
0.6382
0.29648
0.076936
48.8293
20.731431
0.332067
0.076936
72.400999
2.092243
0.800741
0.076936
0.076936
ok
null
litscrape_000064
64
InfluenzaHA_binder_design_49
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
MYKLVVEGDINDLMDAAILASMKGEKWKIEGDKLVIETDSKEKLEELKKELEEKGIKIVEVT
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7477
0.4624
0.0987
0.749
0.8941
0.6033
0.295209
0.077044
48.59328
20.256528
0.330747
0.077044
73.823491
2.052097
0.804099
0.077044
0.077044
ok
null
litscrape_000065
65
InfluenzaHA_binder_design_1
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
MYKVTATGTENQAQALLLFAKSLGIPAEQEGNTVTAEVERKSDAEQLETAGKALGMTVEVEE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7424
0.4491
0.0971
0.7373
0.8826
0.6219
0.310079
0.078382
50.872769
19.753865
0.347009
0.078382
74.799716
1.947637
0.801582
0.078382
0.078382
ok
null
litscrape_000066
66
InfluenzaHA_binder_design_40
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
NKEKIQELINKYVLEAIKKGNQKAYEQIILLGVDAIVKGRDPEEVEKEIKKILEG
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6736
0.4782
0.0949
0.7699
0.8975
0.6874
0.38876
0.077066
54.517233
17.667927
0.435931
0.077066
72.231047
2.128431
0.756339
0.077066
0.077066
ok
null
litscrape_000067
67
InfluenzaHA_binder_design_46
RFDiffusion
InfluenzaHA
1
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
NKKDVALLMSQSIARSMGVTNVSLRVEGDTLIMEAEKVDEKVLNAYKMSKWVAEALGVGFEFRER
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6659
0.4491
0.1056
0.7435
0.8868
0.6553
0.311369
0.089238
50.120488
19.73275
0.34853
0.089238
70.361824
2.50837
0.768277
0.089238
0.089238
ok
null
litscrape_000068
68
InfluenzaHA_binder_design_23
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
REEEEKELEEEIKKLKEEAEKFIKEVEEKNPATAMVFKSIFEETLKEAEKKMKESNSLEEKRKIVEQLKNFFEQLKQAYKNM
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7403
0.4226
0.1024
0.7189
0.894
0.6522
0.321143
0.080647
50.748655
19.080568
0.372949
0.080647
73.245392
2.732738
0.781266
0.080647
0.080647
ok
null
litscrape_000069
69
InfluenzaHA_binder_design_19
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
SAAEEAERLAKQFEEALKRLKENAEKAEAEGLAGVMYAASEARSLALTAKAYADQSERIKEIAKEVEELAKKLEEKAK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6969
0.4467
0.1032
0.7269
0.8909
0.5771
0.328338
0.080702
51.097764
18.844841
0.380074
0.080702
72.85171
2.773602
0.780606
0.080702
0.080702
ok
null
litscrape_000070
70
InfluenzaHA_binder_design_60
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
SAEEEAEEDRKYGEEVMEKAEKGEADEEELREGVLAYGRYAGRTGSFRALENAQRLAKAMGKSGDDALVEALKEASEVA
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7138
0.4259
0.1036
0.7247
0.8946
0.6351
0.363435
0.083239
54.795914
17.397866
0.425383
0.083239
74.381899
2.645941
0.840665
0.083239
0.083239
ok
null
litscrape_000071
71
InfluenzaHA_binder_design_93
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
SAEKAAQAVVEAFKRVSEAVREALERAKEEGPEEAEKAIEEVKAVAEEEVKEAEKIHPAAAMVLKSIADSMIEQAEVKMKELVE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.5873
0.4454
0.096
0.7481
0.911
0.6628
0.336522
0.075571
51.948777
18.577441
0.395084
0.075571
68.383329
3.686478
0.700507
0.075571
0.075571
ok
null
litscrape_000072
72
InfluenzaHA_binder_design_56
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
SAQLLVRLMEQAAKQGNAALAQQSAEKAAAELRAEGKDEEAEEVLAKGKKLIAEM
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7081
0.4684
0.0797
0.7938
0.9303
0.764
0.335312
0.069047
51.574769
19.171715
0.372464
0.069047
72.53103
2.034683
0.765769
0.069047
0.069047
ok
null
litscrape_000073
73
InfluenzaHA_binder_design_66
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
SDEEIANIVSEVFRAREAGDAEKIKEIAEEVKKKVEEGDKEARSVLLIAEEALKEVEG
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6528
0.4739
0.1017
0.7515
0.8799
0.6317
0.383838
0.105669
54.703748
17.555273
0.430417
0.105669
70.859682
2.46514
0.743039
0.105669
0.105669
ok
null
litscrape_000074
74
InfluenzaHA_binder_design_26
RFDiffusion
InfluenzaHA
1
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
SEELARKRALVFAAQVLTDIAASGGPAYAAEQAVRLAAEAGDKELALRALEVLARRDPSDQEGLERAAELALEAGVPREEVEAVVERAREL
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.705
0.4338
0.1055
0.7108
0.8972
0.6699
0.312265
0.078932
51.016093
19.336911
0.36841
0.078932
73.685802
2.660169
0.848467
0.078932
0.078932
ok
null
litscrape_000075
75
InfluenzaHA_binder_design_36
RFDiffusion
InfluenzaHA
1
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
SEERRKEFGLEYATKALTEAAEHLRAGDRAMAASKAMQAVQFAQMISKEYGDKVWKAYQEAVANDDLEKAAELIEKVREELVKEYK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7179
0.4928
0.1104
0.7154
0.8911
0.6295
0.364285
0.097834
53.56029
17.670943
0.429485
0.097834
72.259439
2.93095
0.801622
0.097834
0.097834
ok
null
litscrape_000076
76
InfluenzaHA_binder_design_25
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
SEEVDKFYEEVKKELKELGEENLLRTLELLYEALKRQGEYKLAKQVAEVILKQAKEK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6767
0.4604
0.094
0.7678
0.8989
0.682
0.343012
0.075232
51.716265
18.965492
0.384712
0.075232
69.322438
2.396694
0.750832
0.075232
0.075232
ok
null
litscrape_000077
77
InfluenzaHA_binder_design_77
RFDiffusion
InfluenzaHA
1
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
SEKEEALKLAKEAQNALFSKGRLDEAIKVGVEMVMHAVKGDIEEAKKLYKEAISK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.5088
0.4844
0.0974
0.7916
0.9001
0.6861
0.399819
0.071164
55.9243
17.502933
0.450144
0.071164
65.532877
2.873806
0.639822
0.071164
0.071164
ok
null
litscrape_000078
78
InfluenzaHA_binder_design_85
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
SEKVDKQTVEMYSREFKERMERQKKELEEQIEKASLEEAKALLEKAIQEMKADLKITSAHINSLENGKEYKEKVVKELQEELEKQEKELREKVEKRLKE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6719
0.4312
0.111
0.7305
0.903
0.601
0.34765
0.083187
53.516839
18.012328
0.422197
0.083187
76.707725
3.130174
0.803806
0.083187
0.083187
ok
null
litscrape_000079
79
InfluenzaHA_binder_design_2
RFDiffusion
InfluenzaHA
1
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
SERAKEFVKEIVKEMFFEFASQALEYHQEAGLPWQVAADTVENIGNTFGATSAGEEIKTAAKEFVAYMRANPDLTAAEAKEKLKEILEKA
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6992
0.4306
0.0979
0.7219
0.9016
0.6531
0.280852
0.08104
47.813893
20.584037
0.322653
0.08104
71.419229
3.533057
0.781259
0.08104
0.08104
ok
null
litscrape_000080
80
InfluenzaHA_binder_design_45
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
SEVAQAQKIIEQANKSSDEKVRKFVLETAADMFETMGWQEAAALLREAAAKL
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6863
0.4774
0.0964
0.7612
0.8872
0.6228
0.318666
0.081414
49.485425
19.735788
0.35
0.081414
67.966249
1.953165
0.770917
0.081414
0.081414
ok
null
litscrape_000081
81
InfluenzaHA_binder_design_15
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
SHAVEEMKKVVEEAEKVAETGPMEAAWILTTKAAILGLPQEVLDFIVELFSKAAEDPENRKEYFEKAREKVIKAVEEMEKK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.5849
0.4559
0.1007
0.7452
0.8925
0.6219
0.317536
0.079485
51.079794
19.230922
0.369321
0.079485
69.527856
3.217254
0.713011
0.079485
0.079485
ok
null
litscrape_000082
82
InfluenzaHA_binder_design_88
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
SKDEKMKKKFDEIKKKHPDLIKDFKVENGKVYIKLKELSNESWQLVLEVIGEAVKFGFKVTVTVE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6771
0.4719
0.0883
0.7689
0.912
0.6711
0.334367
0.072834
51.780615
19.290925
0.380506
0.072834
69.130186
2.815507
0.710881
0.072834
0.072834
ok
null
litscrape_000083
83
InfluenzaHA_binder_design_70
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
SKEAENALRTTVLLVEEALRQVKRDPSVAPIRVQMVEAALNQAKPYISEETYKELKKKLEEAKKLWKEGDKFEEALKKLEEVLKKLKELLE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7112
0.4571
0.0996
0.7178
0.9011
0.652
0.357035
0.080531
53.95951
17.961566
0.4247
0.080531
75.293882
2.928727
0.791584
0.080531
0.080531
ok
null
litscrape_000084
84
InfluenzaHA_binder_design_69
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
SKLLDAAMKVSLEIALMGHKVTKIEMKGDEVVIEVEGISKEDFEKLKEFAKKISEETGVKIEIKK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.712
0.4596
0.0936
0.7508
0.8978
0.622
0.32235
0.075327
51.396025
19.506599
0.363841
0.075327
73.081545
2.360468
0.78396
0.075327
0.075327
ok
null
litscrape_000085
85
InfluenzaHA_binder_design_29
RFDiffusion
InfluenzaHA
1
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
SLEEKAKKLIEKLKKEGKTIEATMLEKALEMAKTSKNKETGKRVLEILMKEAER
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6452
0.4686
0.103
0.7717
0.89
0.6421
0.436427
0.07819
57.296926
16.07696
0.489998
0.07819
70.211254
2.561422
0.715564
0.07819
0.07819
ok
null
litscrape_000086
86
InfluenzaHA_binder_design_90
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
SLGDEVVQKIIEKMEKSSEKTAQVTADVAVSIWRDLGWQEQADKIEKAREELLKKK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6179
0.4712
0.1032
0.7609
0.8852
0.6359
0.352159
0.076241
52.9087
18.67219
0.393706
0.076241
65.211546
3.147485
0.682136
0.076241
0.076241
ok
null
litscrape_000087
87
InfluenzaHA_binder_design_83
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
SPGEQAVEKAEYMLQIVAAAASQEAGVPEEEAWGYAREKKDKVRADPSKAAEIAEEALKKVKEIGNKSGETAATLLLEDVKRA
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6097
0.4694
0.1032
0.7385
0.8893
0.6244
0.355516
0.097812
52.157011
17.841238
0.417612
0.097812
65.863498
6.283886
0.69017
0.097812
0.097812
ok
null
litscrape_000088
88
InfluenzaHA_binder_design_16
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
SRGEKVVESAKKVMTMLAEASSDQSAEAVELMGESYIRSYVKEASFDPEAAEKVREIGEKITEEAVKKVKEKE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7356
0.4707
0.1005
0.7302
0.8915
0.6356
0.3851
0.082029
54.879396
17.329156
0.448139
0.082029
73.983373
2.42834
0.803836
0.082029
0.082029
ok
null
litscrape_000089
89
InfluenzaHA_binder_design_52
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
SSAEKAARVNIELADKIAKSSPTVAATMYKVTAEYAEKKGEKETAKEAKEKAEKLE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7183
0.4786
0.0974
0.7554
0.8888
0.6606
0.427572
0.08449
57.362724
16.227115
0.483398
0.08449
72.17969
1.925084
0.799755
0.08449
0.08449
ok
null
litscrape_000090
90
InfluenzaHA_binder_design_4
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
SSKETAVALILEALLRQGERDDWEFARNKAAQVLATYDQAEAERLRAAKTDEEARELMEEALEKTKEKAE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.4372
0.4668
0.1001
0.8042
0.9059
0.7198
0.348398
0.066444
52.014723
18.301192
0.401187
0.066444
47.71224
11.210688
0.409465
0.066444
0.066444
ok
null
litscrape_000091
91
InfluenzaHA_binder_design_32
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
SSLEEYLREKAKEAYEKGNKVSAELLWDIRQQMADDRGKGEEAKKEIEEEKKKLE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6793
0.4392
0.098
0.7545
0.884
0.5609
0.403603
0.076386
56.623515
17.009776
0.453685
0.076386
71.372811
2.286959
0.780767
0.076386
0.076386
ok
null
litscrape_000092
92
InfluenzaHA_binder_design_34
RFDiffusion
InfluenzaHA
1
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
SVAERQAKVQELTEKALELAEKWLKDESYWEELKELLKENQEYALGIITEAGTRLMNKDVKAGVKLVQKALKELEELQK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6613
0.4522
0.1025
0.7394
0.8983
0.6438
0.356885
0.089649
53.307911
17.765696
0.417398
0.089649
70.285933
3.017161
0.761611
0.089649
0.089649
ok
null
litscrape_000093
93
InfluenzaHA_binder_design_55
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
YEEAKKYLEELAKLAEEIAKKYPEVKELAERTKKNAEKAKELVDKAEKGEKEDEVPKALNELLLDAMQLGGKVDDKYGNQVVSLAIKAKDAYEKKK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.8313
0.4523
0.104
0.6948
0.8966
0.6125
0.303662
0.083915
47.102465
20.75879
0.312358
0.083915
81.221089
2.262401
0.871137
0.083915
0.083915
ok
null
litscrape_000094
94
InfluenzaHA_binder_design_33
RFDiffusion
InfluenzaHA
0
null
ADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPSWSYISSVSSSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPGLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNR
YKLTVTGKDIDKMMKAALEMALKGLKPTWEGDTISVETSDKELAEELKKFAESLGLKAEITE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.775
0.4581
0.0939
0.7532
0.9016
0.601
0.295484
0.078627
47.972629
20.268494
0.330824
0.078627
75.880729
1.873817
0.81455
0.078627
0.078627
ok
null
litscrape_000095
95
PD-L1_b2
BindCraft
PD-L1
0
null
AFTVTVPKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDVKLQDAGVYRCMISYGGADYKRITVKVNA
MEEEYEPFRKRIMEEVRKRLEEAKKKGPWAVAHLMIQFFHENRDMPEELMIEVMNEFARVQNELNEAAR
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7121
0.3924
0.1227
0.5188
0.7469
0.4295
0.403863
0.125601
41.260087
16.036726
0.278754
0.125601
71.812895
3.676598
0.743613
0.125601
0.125601
ok
null
litscrape_000096
96
PD-L1_b10
BindCraft
PD-L1
1
null
AFTVTVPKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDVKLQDAGVYRCMISYGGADYKRITVKVNA
MEEVKEFLAKNSPYSKNFLDDFIEKHREGKVTEEDWEKLKDYFINAAKLVASEDETFIKHWEKDVEQMMEWMKTATPSDFEFVVRFYLSVLQKMLEMK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6248
0.3815
0.1048
0.5665
0.8216
0.5298
0.409489
0.101103
44.268407
15.62026
0.308113
0.101103
66.935061
6.151155
0.680959
0.101103
0.101103
ok
null
litscrape_000097
97
PD-L1_b201
BindCraft
PD-L1
1
null
AFTVTVPKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDVKLQDAGVYRCMISYGGADYKRITVKVNA
MERKVLHFEGVSEENWEEVLEEVKKKFKEFIEEKGKGPYTVIVMFTYRDPETGKIRVEVFELKFEGLDAEEAWEKLKKEIEEKLKGKEFYEGMVFTLIIEY
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.8128
0.4835
0.127
0.4658
0.779
0.4651
0.489928
0.119223
40.501142
17.029083
0.255037
0.119223
81.599925
2.519938
0.860292
0.119223
0.119223
ok
null
litscrape_000098
98
PD-L1_b5
BindCraft
PD-L1
1
null
AFTVTVPKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDVKLQDAGVYRCMISYGGADYKRITVKVNA
MSVIDRQFEVIRSHMPDKAEADGWKENFKRIFRDARPEDKHMMLVFLWMLEIVLEYQGKMTPEVREAIEELKKFIEES
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.5238
0.3106
0.0966
0.6066
0.8009
0.4497
0.350957
0.114858
40.537363
17.07725
0.282045
0.114858
56.355003
8.881056
0.593373
0.114858
0.114858
ok
null
litscrape_000099
99
PD-L1_b1
BindCraft
PD-L1
1
null
AFTVTVPKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDVKLQDAGVYRCMISYGGADYKRITVKVNA
PRLSVREVLERLLAADDPALSEGERRFLRGALEMYDILDPEHQKRWEEMLTSWFLRHGREHFRSPLVDEL
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6941
0.3799
0.1204
0.5234
0.7559
0.4154
0.388761
0.10921
43.499273
15.901488
0.270118
0.10921
67.98626
3.804336
0.716208
0.10921
0.10921
ok
null
End of preview. Expand in Data Studio

litscrape: AlphaFold2 + AlphaFold3 metrics

Per-design AlphaFold2 and AlphaFold3 confidence metrics for the binder–target pairs in yk0/litscrape. The source dataset provides sequences only (no structures); these metrics were produced by predicting/scoring each complex from sequence.

4020 rows, one per binder–target pair (4020 scored ok).

How the metrics were computed

  1. Target structure — each unique target sequence was folded once with AF2 monomer (ColabDesign hallucination protocol) to obtain a target template.
  2. AF2 metrics (af2_*) — de novo AF2-Multimer (ColabDesign binder protocol, single model model_1_multimer_v3, 3 recycles, no MSA, no initial guess): the templated target + the binder sequence are folded into a complex, and confidence metrics are read out.
  3. AF3 metrics (af3_*) — AF3Score run on the AF2-predicted complex, conditioned on those coordinates (init_guess=true, no MSA). These are AF3's confidence in the AF2 structure, not an independent de-novo AF3 prediction.

Columns

  • Metadata / labels carried over from the source dataset: binder_id, source_publication, target, label, binding_affinity_nm, target_sequence, binder_sequence
  • label — binary experimental binding label (1 = binder, 0 = non-binder).
  • AF2 (model_1_multimer_v3): af2_complex_plddt, af2_ptm, af2_iptm, af2_pae, af2_ipae, af2_min_ipae (note: af2_complex_plddt/af2_iptm etc. are on a 0–1 scale; PAE values are normalised as in ColabDesign).
  • AF3: af3_ptm, af3_iptm, af3_chain_A_plddt, af3_chain_A_pae, af3_chain_A_ptm, af3_chain_A_iptm, af3_chain_B_plddt, af3_chain_B_pae, af3_chain_B_ptm, af3_chain_B_iptm, af3_iptm_A_B (note: AF3 pLDDT is 0–100; af3_chain_B_* = binder chain; the per-chain iptm fields equal af3_iptm for a 2-chain complex).
  • status, error.

Important caveats

  • These are de-novo predictions from sequence, not refolds of designed structures, so confidence values are markedly lower than initial-guess pipelines (e.g. Proteina-Complexa evals) and are not directly comparable to them in absolute terms.
  • The target template is an AF2-predicted monomer, so target-fold error propagates into every complex for that target.
  • As classifiers of the experimental label, the metrics are weak-to-modest (binder pLDDT is the most predictive; AUC ~0.60–0.68 on litscrape, lower on proteinbase). AF3 closely tracks AF2 and adds little.
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