Datasets:
File size: 1,397 Bytes
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* Genome-wide Complex Trait Analysis (GCTA)
* version v1.94.1 Linux
* Built at Nov 15 2022 21:14:25, by GCC 8.5
* (C) 2010-present, Yang Lab, Westlake University
* Please report bugs to Jian Yang <jian.yang@westlake.edu.cn>
*******************************************************************
Analysis started at 22:03:19 CST on Fri May 22 2026.
Hostname: user-H3C-UniServer-R5300-G6
Options:
--bfile ../700w
--make-grm
--out grm
Note: GRM is computed using the SNPs on the autosomes.
Reading PLINK FAM file from [../700w.fam]...
1404 individuals to be included from FAM file.
1404 individuals to be included. 0 males, 0 females, 1404 unknown.
Reading PLINK BIM file from [../700w.bim]...
7736103 SNPs to be included from BIM file(s).
Computing the genetic relationship matrix (GRM) v2 ...
Subset 1/1, no. subject 1-1404
1404 samples, 7736103 markers, 986310 GRM elements
IDs for the GRM file have been saved in the file [grm.grm.id]
Computing GRM...
100% finished in 281.6 sec
7736103 SNPs have been processed.
Used 7736103 valid SNPs.
The GRM computation is completed.
Saving GRM...
GRM has been saved in the file [grm.grm.bin]
Number of SNPs in each pair of individuals has been saved in the file [grm.grm.N.bin]
Analysis finished at 22:08:10 CST on Fri May 22 2026
Overall computational time: 4 minutes 50 sec.
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