File size: 8,673 Bytes
ff0fadf
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
import torch
import torch.nn as nn
from torch import Tensor

try:
    import dgl
    from dgl import DGLGraph
except ImportError:
    pass 

from dataclasses import dataclass
from itertools import chain
from typing import Callable, List, Tuple, Union

# --- 引入模块工厂 ---
from onescience.modules.edge.mesh_edge_block import MeshEdgeBlock
from onescience.modules.mlp.mesh_graph_mlp import MeshGraphMLP
from onescience.modules.node.mesh_node_block import MeshNodeBlock

# 保持工具类引用
from onescience.modules.utils.gnnlayer_utils import CuGraphCSC, set_checkpoint_fn
from onescience.modules.layer.activations import get_activation
from onescience.modules.meta import ModelMetaData
from onescience.modules.module import Module


@dataclass
class MetaData(ModelMetaData):
    name: str = "MeshGraphNet"
    # Optimization
    jit: bool = False
    cuda_graphs: bool = False
    amp_cpu: bool = False
    amp_gpu: bool = True
    torch_fx: bool = False
    # Inference
    onnx: bool = False
    # Physics informed
    func_torch: bool = True
    auto_grad: bool = True


class Model(Module):
    """
    LSMMeshGraphNet 网络架构 (Refactored).
    
    使用网格图的 MLP、边更新和节点更新模块构建。
    """

    def __init__(
        self,
        args,
        device,
        processor_size: int = 15,
        mlp_activation_fn: Union[str, List[str]] = "relu",
        num_layers_node_processor: int = 2,
        num_layers_edge_processor: int = 2,
        hidden_dim_processor: int = 128,
        hidden_dim_node_encoder: int = 128,
        num_layers_node_encoder: Union[int, None] = 2,
        hidden_dim_edge_encoder: int = 128,
        num_layers_edge_encoder: Union[int, None] = 2,
        hidden_dim_node_decoder: int = 128,
        num_layers_node_decoder: Union[int, None] = 2,
        aggregation: str = "sum",
        do_concat_trick: bool = False,
        num_processor_checkpoint_segments: int = 0,
        recompute_activation: bool = False,
    ):
        super().__init__(meta=MetaData())
        self.__name__ = "LSMMeshGraphNet"
        
        # 参数绑定
        self.input_dim_nodes = args.fun_dim
        self.input_dim_edges = 4 
        self.output_dim = args.out_dim
        
        activation_fn = get_activation(mlp_activation_fn)

        # 1. Edge Encoder
        self.edge_encoder = MeshGraphMLP(
            input_dim=self.input_dim_edges,
            output_dim=hidden_dim_processor,
            hidden_dim=hidden_dim_edge_encoder,
            hidden_layers=num_layers_edge_encoder,
            activation_fn=activation_fn,
            norm_type="LayerNorm",
            recompute_activation=recompute_activation,
        )

        # 2. Node Encoder
        self.node_encoder = MeshGraphMLP(
            input_dim=self.input_dim_nodes,
            output_dim=hidden_dim_processor,
            hidden_dim=hidden_dim_node_encoder,
            hidden_layers=num_layers_node_encoder,
            activation_fn=activation_fn,
            norm_type="LayerNorm",
            recompute_activation=recompute_activation,
        )

        # 3. Node Decoder
        self.node_decoder = MeshGraphMLP(
            input_dim=hidden_dim_processor,
            output_dim=self.output_dim,
            hidden_dim=hidden_dim_node_decoder,
            hidden_layers=num_layers_node_decoder,
            activation_fn=activation_fn,
            norm_type=None,
            recompute_activation=recompute_activation,
        )

        # 4. Processor
        self.processor = MeshGraphNetProcessor(
            processor_size=processor_size,
            input_dim_node=hidden_dim_processor,
            input_dim_edge=hidden_dim_processor,
            num_layers_node=num_layers_node_processor,
            num_layers_edge=num_layers_edge_processor,
            aggregation=aggregation,
            norm_type="LayerNorm",
            activation_fn=activation_fn,
            do_concat_trick=do_concat_trick,
            num_processor_checkpoint_segments=num_processor_checkpoint_segments,
        )

    def forward(
        self,
        node_features: Tensor,
        edge_features: Tensor,
        graph: Union[DGLGraph, List[DGLGraph], CuGraphCSC],
    ) -> Tensor:
        edge_features = self.edge_encoder(edge_features)
        node_features = self.node_encoder(node_features)
        x = self.processor(node_features, edge_features, graph)
        x = self.node_decoder(x)
        return x


class MeshGraphNetProcessor(nn.Module):
    """
    MeshGraphNet processor block constructed from edge and node update modules.
    """

    def __init__(
        self,
        processor_size: int = 15,
        input_dim_node: int = 128,
        input_dim_edge: int = 128,
        num_layers_node: int = 2,
        num_layers_edge: int = 2,
        aggregation: str = "sum",
        norm_type: str = "LayerNorm",
        activation_fn: nn.Module = nn.ReLU(),
        do_concat_trick: bool = False,
        num_processor_checkpoint_segments: int = 0,
    ):
        super().__init__()
        self.processor_size = processor_size
        self.num_processor_checkpoint_segments = num_processor_checkpoint_segments

        edge_blocks = []
        node_blocks = []

        for _ in range(self.processor_size):
            edge_blocks.append(
                MeshEdgeBlock(
                    input_dim_nodes=input_dim_node,
                    input_dim_edges=input_dim_edge,
                    output_dim=input_dim_edge,
                    hidden_dim=input_dim_edge,
                    hidden_layers=num_layers_edge,
                    activation_fn=activation_fn,
                    norm_type=norm_type,
                    do_concat_trick=do_concat_trick,
                    recompute_activation=False
                )
            )
            node_blocks.append(
                MeshNodeBlock(
                    aggregation=aggregation,
                    input_dim_nodes=input_dim_node,
                    input_dim_edges=input_dim_edge,
                    output_dim=input_dim_node,
                    hidden_dim=input_dim_node,
                    hidden_layers=num_layers_node,
                    activation_fn=activation_fn,
                    norm_type=norm_type,
                    recompute_activation=False
                )
            )

        # 按照 Edge -> Node 的顺序交替排列
        layers = list(chain(*zip(edge_blocks, node_blocks)))

        self.processor_layers = nn.ModuleList(layers)
        self.num_processor_layers = len(self.processor_layers)
        self.set_checkpoint_segments(self.num_processor_checkpoint_segments)

    def set_checkpoint_segments(self, checkpoint_segments: int):
        if checkpoint_segments > 0:
            if self.num_processor_layers % checkpoint_segments != 0:
                raise ValueError(
                    "Processor layers must be a multiple of checkpoint_segments"
                )
            segment_size = self.num_processor_layers // checkpoint_segments
            self.checkpoint_segments = []
            for i in range(0, self.num_processor_layers, segment_size):
                self.checkpoint_segments.append((i, i + segment_size))
            self.checkpoint_fn = set_checkpoint_fn(True)
        else:
            self.checkpoint_fn = set_checkpoint_fn(False)
            self.checkpoint_segments = [(0, self.num_processor_layers)]

    def run_function(
        self, segment_start: int, segment_end: int
    ) -> Callable[
        [Tensor, Tensor, Union[DGLGraph, List[DGLGraph]]], Tuple[Tensor, Tensor]
    ]:
        segment = self.processor_layers[segment_start:segment_end]

        def custom_forward(
            node_features: Tensor,
            edge_features: Tensor,
            graph: Union[DGLGraph, List[DGLGraph]],
        ) -> Tuple[Tensor, Tensor]:
            for module in segment:
                edge_features, node_features = module(
                    edge_features, node_features, graph
                )
            return edge_features, node_features

        return custom_forward

    @torch.jit.unused
    def forward(
        self,
        node_features: Tensor,
        edge_features: Tensor,
        graph: Union[DGLGraph, List[DGLGraph], CuGraphCSC],
    ) -> Tensor:
        for segment_start, segment_end in self.checkpoint_segments:
            edge_features, node_features = self.checkpoint_fn(
                self.run_function(segment_start, segment_end),
                node_features,
                edge_features,
                graph,
                use_reentrant=False,
                preserve_rng_state=False,
            )

        return node_features