Datasets:
id
stringlengths 1
6
| tokens
sequence | pos_tags
sequence | ner_tags
sequence |
---|---|---|---|
0 | [
"Abbreviations",
":",
"GEMS",
",",
"Global",
"Enteric",
"Multicenter",
"Study",
";",
"VIP",
",",
"ventilated",
"improved",
"pit",
"."
] | [
8,
13,
12,
13,
12,
12,
12,
12,
13,
12,
13,
16,
0,
8,
13
] | [
0,
0,
1,
0,
3,
4,
4,
4,
0,
1,
0,
3,
4,
4,
0
] |
1 | [
"Fractions",
"from",
"FPLC",
"purification",
"were",
"treated",
"with",
"Laemmli",
"buffer",
"[",
"82",
"]",
"with",
"10",
"mM",
"1,4",
"-",
"dithiothreitol",
"(",
"DTT",
")",
"and",
"heated",
"for",
"5",
"m",
"at",
"85",
"°",
"C",
"then",
"analyzed",
"on",
"a",
"4",
"%",
"to",
"15",
"%",
"discontinuous",
"SDS",
"gel",
"with",
"a",
"6",
"%",
"stacking",
"gel",
"run",
"at",
"ambient",
"temperature",
"at",
"a",
"constant",
"100",
"V."
] | [
8,
1,
12,
8,
3,
16,
1,
12,
8,
17,
17,
17,
1,
9,
8,
9,
13,
8,
13,
12,
13,
5,
16,
1,
9,
8,
1,
9,
8,
8,
2,
16,
1,
6,
9,
8,
10,
9,
8,
0,
12,
8,
1,
6,
9,
8,
8,
8,
16,
1,
0,
8,
1,
6,
0,
9,
8
] | [
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
2 | [
"Two",
"epithelial",
"cytokines",
"other",
"than",
"IL33",
",",
"IL25",
",",
"and",
"thymic",
"stromal",
"lymphopoietin",
"(",
"TSLP",
")",
"are",
"known",
"to",
"activate",
"ILC2",
"in",
"the",
"lung",
"[",
"22,24",
"]",
"."
] | [
9,
0,
8,
0,
1,
8,
13,
8,
13,
5,
0,
0,
8,
13,
12,
13,
3,
16,
10,
16,
12,
1,
6,
8,
13,
9,
13,
13
] | [
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
4,
0,
1,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0
] |
3 | [
"We",
"developed",
"a",
"variant",
"of",
"gene",
"set",
"enrichment",
"analysis",
"(",
"GSEA",
")",
"to",
"determine",
"whether",
"a",
"genetic",
"pathway",
"shows",
"evidence",
"for",
"age",
"regulation",
"[",
"23",
"]",
"."
] | [
11,
16,
6,
8,
1,
8,
8,
8,
8,
13,
12,
13,
10,
16,
14,
6,
0,
8,
16,
8,
1,
8,
8,
13,
9,
13,
13
] | [
0,
0,
0,
0,
0,
3,
4,
4,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
4 | [
"Red",
"represents",
"samples",
"having",
"the",
"normalized",
"pY232",
"and/or",
"pY291",
"values",
"in",
"cancer",
"tissues",
"≥",
"1.1",
"folds",
"of",
"normal",
"tissues",
"(",
"of",
"which",
"enhanced",
"pY232",
"and/or",
"pY291",
"level",
"may",
"be",
"indicative",
"of",
"dominant",
"survival",
"mode",
"of",
"Fas",
"signaling",
")",
";",
"blue",
"represents",
"samples",
"having",
"both",
"normalized",
"pY232",
"and",
"pY291",
"values",
"<",
"1.1",
"(",
"of",
"which",
"pY232",
"and",
"pY291",
"levels",
"less",
"than",
"or",
"equal",
"to",
"normal",
"may",
"be",
"indicative",
"of",
"the",
"apoptosis",
"-",
"ready",
"mode",
"of",
"Fas",
"signaling",
")",
".",
"(",
"D",
")",
"Lysates",
"of",
"rectal",
"cancer",
"tissues",
"before",
"and",
"after",
"radiotherapy",
"(",
"RT",
")",
"from",
"each",
"of",
"the",
"nine",
"patients",
"were",
"subjected",
"to",
"SDS",
"-",
"PAGE",
"and",
"immunoblotting",
"with",
"antibodies",
"against",
"pY232",
",",
"pY291",
",",
"and",
"C",
"-",
"terminal",
"(",
"C",
"-",
"ter",
")",
"of",
"Fas",
"."
] | [
8,
16,
8,
16,
6,
16,
12,
5,
8,
8,
1,
8,
8,
13,
9,
8,
1,
0,
8,
13,
1,
11,
16,
12,
5,
8,
8,
3,
3,
0,
1,
0,
8,
8,
1,
12,
8,
13,
13,
8,
16,
8,
16,
5,
16,
12,
5,
8,
8,
1,
9,
13,
1,
11,
12,
5,
8,
8,
0,
1,
5,
0,
1,
0,
3,
3,
0,
1,
6,
8,
8,
0,
8,
1,
12,
8,
13,
13,
13,
17,
13,
8,
1,
0,
8,
8,
1,
5,
1,
8,
13,
12,
13,
1,
11,
1,
6,
9,
8,
3,
16,
1,
12,
8,
12,
5,
8,
1,
8,
1,
12,
13,
8,
13,
5,
8,
8,
0,
13,
8,
8,
8,
13,
1,
12,
13
] | [
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
5 | [
"Relative",
"risks",
"(",
"RRs",
")",
"with",
"95",
"%",
"confidence",
"intervals",
"(",
"CIs",
")",
"are",
"reported",
"."
] | [
0,
8,
13,
12,
13,
1,
9,
8,
8,
8,
13,
12,
13,
3,
16,
13
] | [
3,
4,
0,
1,
0,
0,
0,
0,
3,
4,
0,
1,
0,
0,
0,
0
] |
6 | [
"Increasing",
"concentrations",
"of",
"the",
"p53",
"activators",
"significantly",
"decrease",
"the",
"levels",
"of",
"SOD1G85R",
"but",
"not",
"the",
"endogenous",
"WTSOD1",
"proteins",
"in",
"western",
"blots",
"of",
"both",
"supernatant",
"and",
"pellet",
"fractions",
".",
"(",
"B",
")",
"A",
"decrease",
"in",
"p53",
"as",
"the",
"result",
"of",
"shRNA",
"knockdown",
"increases",
"the",
"levels",
"of",
"SOD1G85R",
"but",
"not",
"WT",
"SOD1",
"proteins",
"in",
"the",
"SOD1G85R",
"aggregation",
"assay",
",",
"as",
"shown",
"by",
"western",
"blots",
"of",
"both",
"supernatant",
"(",
"S",
")",
"(",
"n",
"=",
"2",
")",
"and",
"pellet",
"(",
"P",
")",
"(",
"n",
"=",
"3",
")",
"fractions",
".",
"(",
"C",
")",
"A",
"complete",
"absence",
"of",
"p53",
"increases",
"the",
"accumulation",
"of",
"SOD1G85R",
"mutant",
"proteins",
"in",
"p53–/",
"–",
"HCT116",
"cells",
"when",
"compared",
"with",
"controls",
"."
] | [
16,
8,
1,
6,
8,
8,
2,
8,
6,
8,
1,
12,
5,
10,
6,
0,
12,
8,
1,
0,
8,
1,
5,
8,
5,
8,
8,
13,
13,
17,
13,
6,
8,
1,
8,
14,
6,
8,
1,
12,
8,
16,
6,
8,
1,
12,
5,
10,
12,
12,
8,
1,
6,
12,
8,
8,
13,
14,
16,
1,
0,
8,
1,
5,
8,
13,
12,
13,
13,
8,
15,
9,
13,
5,
8,
13,
12,
13,
13,
8,
15,
9,
13,
8,
13,
13,
17,
13,
6,
0,
8,
1,
8,
16,
6,
8,
1,
12,
0,
8,
1,
8,
13,
12,
8,
14,
16,
1,
8,
13
] | [
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
1,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
7 | [
"Pravastatin",
"sodium",
"(",
"PSS",
",",
"Fig",
"2.9",
")",
"is",
"the",
"only",
"included",
"NP",
"of",
"microbial",
"origin",
"."
] | [
0,
8,
13,
12,
13,
8,
9,
13,
3,
6,
0,
16,
12,
1,
0,
8,
13
] | [
3,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0
] |
8 | [
"I",
"have",
"read",
"the",
"journal",
"'s",
"policy",
"and",
"the",
"authors",
"of",
"this",
"manuscript",
"have",
"the",
"following",
"competing",
"interests",
":",
"DF",
",",
"EJ",
",",
"and",
"NNL",
"are",
"staff",
"members",
"of",
"the",
"World",
"Health",
"Organization",
"(",
"WHO",
")",
"."
] | [
11,
16,
16,
6,
8,
10,
8,
5,
6,
8,
1,
6,
8,
16,
6,
16,
16,
8,
13,
12,
13,
12,
13,
5,
12,
3,
8,
8,
1,
6,
12,
12,
12,
13,
12,
13,
13
] | [
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
4,
0,
1,
0,
0
] |
9 | [
"Characteristics",
"were",
"compared",
"across",
"the",
"matched",
"groups",
"using",
"standardized",
"mean",
"differences",
"(",
"SMDs",
")",
",",
"with",
"an",
"SMD",
">",
"0.1",
"indicating",
"a",
"clinically",
"important",
"difference",
"."
] | [
8,
3,
16,
1,
6,
16,
8,
16,
0,
0,
8,
13,
12,
13,
13,
1,
6,
12,
1,
9,
16,
6,
2,
0,
8,
13
] | [
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
4,
0,
1,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0
] |
10 | [
"Nutrients",
"that",
"are",
"rich",
"in",
"seafood",
"were",
"selected",
"to",
"be",
"included",
"this",
"study",
":",
"protein",
",",
"eicosapentaenoic",
"acid",
"(",
"EPA",
")",
"and",
"docosahexaenoic",
"acid",
"(",
"DHA",
")",
",",
"vitamins",
"(",
"A",
",",
"D",
",",
"B12",
",",
"and",
"niacin",
")",
",",
"and",
"minerals",
"(",
"zinc",
"and",
"selenium",
",",
"and",
"iron",
")",
"."
] | [
8,
11,
3,
0,
1,
8,
3,
16,
10,
3,
16,
6,
8,
13,
8,
13,
8,
8,
13,
12,
13,
5,
8,
8,
13,
12,
13,
13,
8,
13,
8,
13,
8,
13,
8,
13,
5,
8,
13,
13,
5,
8,
13,
8,
5,
8,
13,
5,
8,
13,
13
] | [
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
0,
1,
0,
0,
3,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
11 | [
"To",
"test",
"if",
"this",
"polymorphism",
"modulates",
"CD24",
"mRNA",
"stability",
",",
"we",
"constructed",
"two",
"plasmids",
"(",
"pTracer",
"CMV2",
"-",
"CD24TG",
"and",
"pTracer",
"CMV2",
"-",
"CD24del",
";",
"Figure",
"5",
",",
"top",
"panel",
")",
"and",
"transfected",
"Chinese",
"hamster",
"ovary",
"(",
"CHO",
")",
"cells",
"with",
"the",
"two",
"constructs",
"."
] | [
10,
16,
14,
6,
8,
16,
8,
8,
8,
13,
11,
16,
9,
8,
13,
12,
8,
13,
8,
5,
12,
8,
13,
8,
13,
12,
9,
13,
0,
8,
13,
5,
16,
0,
8,
8,
13,
12,
13,
8,
1,
6,
9,
8,
13
] | [
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0
] |
12 | [
"Blood",
"pressure",
"(",
"BP",
")",
"will",
"be",
"controlled",
"after",
"each",
"visit",
"."
] | [
8,
8,
13,
12,
13,
3,
3,
16,
1,
6,
8,
13
] | [
3,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0
] |
13 | [
"Briefly",
",",
"Phenotypic",
"Age",
"is",
"calculated",
"using",
"chronological",
"age",
"and",
"9",
"biomarkers",
"(",
"albumin",
",",
"creatinine",
",",
"glucose",
",",
"[",
"log",
"]",
"C",
"-",
"reactive",
"protein",
"[",
"CRP",
"]",
",",
"lymphocyte",
"percent",
",",
"mean",
"cell",
"volume",
",",
"red",
"blood",
"cell",
"distribution",
"width",
",",
"alkaline",
"phosphatase",
",",
"and",
"white",
"blood",
"cell",
"count",
")",
"that",
"were",
"selected",
"using",
"a",
"Cox",
"proportional",
"hazard",
"elastic",
"net",
"model",
"for",
"mortality",
"based",
"on",
"10",
"-",
"fold",
"cross",
"-",
"validation",
"."
] | [
2,
13,
0,
12,
3,
16,
16,
0,
8,
5,
9,
8,
13,
8,
13,
8,
13,
8,
13,
13,
17,
13,
8,
8,
0,
8,
13,
12,
13,
13,
8,
8,
13,
0,
8,
8,
13,
0,
8,
8,
8,
8,
13,
0,
8,
13,
5,
0,
8,
8,
8,
13,
11,
3,
16,
16,
6,
12,
0,
8,
0,
8,
8,
1,
8,
16,
1,
0,
8,
0,
8,
8,
8,
13
] | [
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
4,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
14 | [
"However",
",",
"c",
"-",
"Fos",
",",
"PStat3",
",",
"and",
"PIP3",
"formation",
"were",
"not",
"elevated",
"in",
"response",
"to",
"leptin",
"in",
"obese",
"GSL",
"-",
"deficient",
"mice",
"6",
"wk",
"p.i",
".",
"(",
"Figures",
"7A",
",",
"B",
"and",
"S10A",
")",
".",
"No",
"significant",
"changes",
"were",
"found",
"in",
"mediobasal",
"hypothalamus",
"(",
"MBH",
")",
"baseline",
"mRNA",
"expression",
"of",
"Pomc",
"and",
"cocaine-",
"and",
"amphetamine",
"-",
"regulated",
"transcript",
"(",
"Cart",
")",
"mRNA",
"6",
"wk",
"p.i",
".",
"(",
"Figure",
"S10B",
")",
"."
] | [
2,
13,
8,
13,
8,
13,
12,
13,
5,
12,
8,
3,
10,
16,
1,
8,
1,
8,
1,
0,
12,
13,
0,
8,
9,
12,
8,
13,
13,
8,
9,
13,
8,
5,
8,
13,
13,
6,
0,
8,
3,
16,
1,
0,
8,
13,
12,
13,
8,
8,
8,
1,
12,
5,
8,
5,
8,
13,
16,
8,
13,
12,
13,
8,
9,
12,
8,
13,
13,
8,
8,
13,
13
] | [
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0
] |
15 | [
"It",
"has",
"been",
"found",
"that",
"control",
"has",
"been",
"centered",
"around",
"cyclin",
"-",
"dependent",
"protein",
"kinases",
"(",
"CDKs",
")",
",",
"which",
"trigger",
"the",
"major",
"events",
"of",
"the",
"eukaryotic",
"cell",
"cycle",
"."
] | [
11,
3,
3,
16,
14,
8,
3,
3,
16,
1,
8,
13,
0,
8,
8,
13,
12,
13,
13,
11,
16,
6,
0,
8,
1,
6,
0,
8,
8,
13
] | [
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
4,
4,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
16 | [
"The",
"asparagine",
"hydroxylase",
",",
"termed",
"factor",
"inhibiting",
"HIF",
"HIF",
"(",
"FIH",
")",
"(",
"Uniprot",
"accession",
"number",
":",
"Q9NWT6",
")",
",",
"hydroxylates",
"an",
"asparagine",
"residue",
"within",
"HIFα",
"subunits",
"(",
"N803",
"on",
"HIF-1α",
")",
",",
"resulting",
"in",
"steric",
"inhibition",
"of",
"its",
"interaction",
"with",
"the",
"transcriptional",
"co",
"-",
"activator",
"p300",
"/",
"CBP",
",",
"thereby",
"inhibiting",
"HIF",
"-",
"dependent",
"transcription",
"[",
"2",
"]",
"."
] | [
6,
8,
8,
13,
16,
8,
16,
8,
12,
13,
12,
13,
13,
0,
8,
8,
13,
8,
13,
13,
16,
6,
8,
8,
1,
8,
8,
13,
9,
1,
12,
13,
13,
16,
1,
0,
8,
1,
11,
8,
1,
6,
0,
8,
13,
8,
8,
15,
12,
13,
2,
16,
12,
13,
0,
8,
13,
9,
13,
13
] | [
0,
0,
0,
0,
0,
3,
4,
4,
1,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0
] |
17 | [
"The",
"manuscript",
"by",
"Varma",
"et",
"al",
"explores",
"the",
"relationships",
"between",
"bile",
"acid",
"(",
"BA",
")",
"levels",
"/",
"synthesis",
"and",
"dementia",
"related",
"pathology",
",",
"such",
"as",
"white",
"matter",
"lesions",
"(",
"WML",
")",
"and",
"amyloid",
"deposition",
",",
"as",
"well",
"as",
"vascular",
"dementia",
"risk",
"and",
"sex",
"related",
"differences",
"."
] | [
6,
8,
1,
12,
12,
8,
16,
6,
8,
1,
8,
8,
13,
12,
13,
8,
15,
8,
5,
8,
16,
8,
13,
0,
1,
0,
8,
8,
13,
12,
13,
5,
8,
8,
13,
1,
2,
1,
0,
8,
8,
5,
8,
16,
8,
13
] | [
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
18 | [
"However",
",",
"current",
"literature",
"on",
"the",
"stability",
"of",
"the",
"steroids",
"in",
"DBS",
"is",
"very",
"limited",
",",
"dealing",
"exclusively",
"with",
"17OHP",
"[",
"10–16",
"]",
"or",
"cortisol",
"(",
"Cort",
")",
"[",
"17",
"]",
"."
] | [
2,
13,
0,
8,
1,
6,
8,
1,
6,
8,
1,
12,
3,
2,
0,
13,
16,
2,
1,
12,
13,
9,
13,
5,
8,
13,
12,
13,
13,
9,
13,
13
] | [
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
3,
0,
1,
0,
0,
0,
0,
0
] |
19 | [
"CD",
"is",
"the",
"most",
"common",
"form",
"of",
"inflammatory",
"bowel",
"disease",
",",
"the",
"other",
"being",
"ulcerative",
"colitis",
"(",
"UC",
")",
".",
"We",
"genotyped",
"a",
"cohort",
"of",
"246",
"Belgian",
"UC",
"patients",
"(",
"Caucasians",
")",
"for",
"IL23R",
"(",
"rs11209026",
")",
",",
"ATG16L1",
"(",
"rs2241880",
")",
",",
"and",
"the",
"novel",
"5p13.1",
"locus",
"(",
"rs4613763",
")",
"."
] | [
12,
3,
6,
2,
0,
8,
1,
0,
8,
8,
13,
6,
0,
3,
0,
8,
13,
12,
13,
13,
11,
16,
6,
8,
1,
9,
0,
12,
8,
13,
12,
13,
1,
8,
13,
9,
13,
13,
8,
13,
9,
13,
13,
5,
6,
0,
8,
8,
13,
9,
13,
13
] | [
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
20 | [
"Endophthalmitis",
"after",
"vitreous",
"surgery",
"is",
"an",
"uncommon",
"but",
"a",
"devastating",
"complication.[1",
"]",
"The",
"reported",
"incidence",
"of",
"endophthalmitis",
"after",
"vitreous",
"surgery",
"ranges",
"from",
"0.05",
"%",
"to",
"0.02",
"%",
"with",
"20",
"-",
"G",
"vitrectomy.[2–10",
"]",
"Initial",
"reports",
"showed",
"higher",
"rates",
"of",
"post",
"-",
"minimally",
"invasive",
"vitreoretinal",
"surgery",
"(",
"MIVS",
")",
"endophthalmitis",
",",
"whereas",
"recent",
"reports",
"have",
"shown",
"a",
"declining",
"trend.[6,8,10,11",
"]"
] | [
8,
1,
0,
8,
3,
6,
0,
5,
6,
0,
8,
13,
6,
16,
8,
1,
8,
1,
0,
8,
16,
1,
9,
8,
1,
9,
8,
1,
9,
0,
8,
8,
13,
0,
8,
16,
0,
8,
1,
0,
0,
0,
0,
0,
8,
13,
12,
13,
8,
13,
14,
0,
8,
3,
16,
6,
16,
9,
13
] | [
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
4,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
21 | [
"Body",
"mass",
"index",
"(",
"BMI",
")",
"was",
"calculated",
"as",
"the",
"weight",
"in",
"kilograms",
"divided",
"by",
"the",
"square",
"of",
"the",
"height",
"in",
"meters",
"."
] | [
8,
8,
8,
13,
12,
13,
3,
16,
1,
6,
8,
1,
8,
16,
1,
6,
8,
1,
6,
8,
1,
8,
13
] | [
3,
4,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
22 | [
"Source",
"data",
"are",
"available",
"from",
"https://figshare.com/s/b14c8e6cb1fc5135dd87",
".",
"#",
"Cells",
",",
"number",
"of",
"cells",
";",
"μ",
"CA",
",",
"average",
"cell",
"area",
";",
"LATE",
",",
"a",
"timing",
"factor",
";",
"Leaf",
"A",
",",
"leaf",
"area",
";",
"spch",
",",
"speechless",
"."
] | [
8,
8,
3,
0,
1,
17,
13,
13,
8,
13,
8,
1,
8,
13,
13,
12,
13,
0,
8,
8,
13,
12,
13,
6,
8,
8,
13,
8,
8,
13,
8,
8,
13,
12,
13,
0,
13
] | [
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
3,
4,
4,
0,
0,
0,
0,
0,
0,
0,
1,
0,
3,
0
] |
23 | [
"The",
"best",
"linear",
"unbiased",
"estimates",
"(",
"BLUEs",
")",
"of",
"the",
"481",
"BC1F3:4",
"families",
"were",
"estimated",
"following",
"the",
"model",
":",
"yijm",
"=",
"μ+gi+ej+geij+δ(j)m+εijm",
",",
"where",
"yijm",
"is",
"the",
"phenotype",
"of",
"the",
"ith",
"(",
"i",
"=",
"1,2",
"…",
",",
"481",
")",
"genotype",
"in",
"the",
"jth",
"(",
"j",
"=",
"1,2,3,4",
")",
"environment",
",",
"the",
"mth",
"(",
"m",
"=",
"1,2",
")",
"replicate",
"effect",
"was",
"nested",
"in",
"each",
"environment",
".",
"μ",
"is",
"the",
"overall",
"mean",
",",
"gi",
"is",
"the",
"genotype",
"effect",
",",
"ej",
"is",
"the",
"environmental",
"effect",
",",
"geij",
"is",
"the",
"G×E",
"effect",
",",
"δ(j)m",
"is",
"the",
"replicate",
"effect",
",",
"and",
"εijm",
"~",
"N",
"(",
"0",
",",
"σε2",
")",
"is",
"the",
"error",
"term",
"."
] | [
6,
0,
0,
0,
8,
13,
12,
13,
1,
6,
9,
8,
8,
3,
16,
16,
6,
8,
13,
8,
15,
17,
13,
14,
8,
3,
6,
8,
1,
6,
8,
13,
8,
15,
9,
13,
13,
9,
13,
8,
1,
6,
8,
13,
8,
15,
9,
13,
8,
13,
6,
8,
13,
8,
15,
9,
13,
8,
8,
3,
16,
1,
6,
8,
13,
13,
3,
6,
0,
8,
13,
8,
3,
6,
8,
8,
13,
8,
3,
6,
0,
8,
13,
8,
3,
6,
12,
8,
13,
8,
3,
6,
8,
8,
13,
5,
8,
13,
8,
13,
9,
13,
9,
13,
3,
6,
8,
8,
13
] | [
0,
3,
4,
4,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
24 | [
"KO",
",",
"knockout",
";",
"PSD",
",",
"postsynaptic",
"density",
"."
] | [
12,
13,
8,
13,
12,
13,
0,
8,
13
] | [
1,
0,
3,
0,
1,
0,
3,
4,
0
] |
25 | [
"Small",
"RNA",
"sequencing",
"was",
"performed",
"to",
"profile",
"miRNA",
"expression",
"in",
"SW480",
"and",
"SW620",
"cell",
"lysates",
"(",
"CLs",
")",
"and",
"their",
"released",
"EVs",
".",
"Initially",
",",
"a",
"total",
"of",
"160.46",
"million",
"raw",
"reads",
"were",
"generated",
"by",
"an",
"Illumina",
"HiSeq-2000",
"system",
"for",
"all",
"the",
"samples",
",",
"yielding",
"an",
"average",
"12.77",
"million",
"clean",
"reads",
"."
] | [
0,
8,
8,
3,
16,
10,
16,
12,
8,
1,
9,
5,
9,
8,
8,
13,
12,
13,
5,
11,
16,
12,
13,
2,
13,
6,
8,
1,
9,
9,
0,
8,
3,
16,
1,
6,
12,
12,
8,
1,
6,
6,
8,
13,
16,
6,
0,
9,
9,
0,
8,
13
] | [
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
3,
4,
0,
1,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
26 | [
"Inter-",
"and",
"intra",
"-",
"rater",
"reliability",
"was",
"determined",
"by",
"means",
"of",
"intraclass",
"correlation",
"coefficients",
"(",
"ICC",
")",
"using",
"R",
"Studio",
"(",
"Version",
"1.1.456",
";",
"RStudio",
")",
"based",
"on",
"a",
"mean",
"of",
"2",
"raters",
",",
"consistency",
",",
"2",
"-",
"way",
"mixed",
"-",
"effects",
"model",
"for",
"the",
"qualitative",
"analysis",
"[",
"42",
"]",
"."
] | [
0,
5,
0,
13,
0,
8,
3,
16,
1,
8,
1,
8,
8,
8,
13,
12,
13,
16,
12,
12,
13,
12,
9,
13,
12,
13,
16,
1,
6,
8,
1,
9,
8,
13,
8,
13,
9,
13,
8,
16,
13,
8,
8,
1,
6,
0,
8,
13,
9,
13,
13
] | [
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
27 | [
"The",
"signaling",
"molecule",
"secreted",
"by",
"the",
"hypothalamus",
"is",
"arginine",
"vasopressin",
"(",
"AVP",
")",
",",
"which",
"binds",
"to",
"a",
"specific",
"protein",
"on",
"the",
"surface",
"of",
"kidney",
"cells",
",",
"AVP",
"receptor",
"(",
"AVPR2",
")",
"."
] | [
6,
8,
8,
16,
1,
6,
8,
3,
8,
8,
13,
12,
13,
13,
11,
16,
1,
6,
0,
8,
1,
6,
8,
1,
8,
8,
13,
12,
8,
13,
12,
13,
13
] | [
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
1,
0,
0
] |
28 | [
"The",
"results",
"described",
"above",
"show",
"that",
"membrane",
"-",
"tethered",
"δ",
"-",
"ACTX",
"-",
"Hv1a",
"expression",
"in",
"PDF",
"-",
"secreting",
"LNVs",
"induces",
"a",
"phase",
"-",
"advance",
"of",
"both",
"sLNV",
"PDF",
"secretion",
"rhythms",
"and",
"morning",
"anticipatory",
"locomotor",
"behavior",
"in",
"LD",
",",
"and",
"disrupts",
"free",
"-",
"running",
"locomotor",
"rhythms",
"in",
"DD",
".",
"In",
"order",
"to",
"determine",
"the",
"relationship",
"between",
"these",
"phenotypes",
"and",
"cellular",
"transcriptional",
"feedback",
"oscillation",
",",
"par",
"domain",
"protein",
"1",
"(",
"PDP1",
")",
"clock",
"protein",
"levels",
"were",
"assayed",
"in",
"the",
"sLNV",
",",
"dorsal",
"lateral",
"neuron",
"(",
"LND",
")",
",",
"dorsal",
"neuron",
"(",
"DN)1",
",",
"and",
"DN2",
"neurons",
"of",
"flies",
"expressing",
"membrane",
"-",
"tethered",
"δ",
"-",
"ACTX",
"-",
"Hv1a",
"in",
"the",
"LNVs",
".",
"PDP1",
"is",
"an",
"oscillating",
"transcription",
"factor",
"that",
"has",
"been",
"implicated",
"in",
"a",
"second",
"interlocking",
"circadian",
"transcriptional",
"feedback",
"loop",
"[",
"8",
"]",
"."
] | [
6,
8,
16,
2,
16,
11,
8,
13,
16,
13,
13,
8,
13,
12,
8,
1,
12,
13,
16,
12,
16,
6,
8,
13,
8,
1,
5,
12,
12,
8,
8,
5,
0,
0,
0,
8,
1,
12,
13,
5,
16,
2,
13,
16,
0,
8,
1,
12,
13,
1,
8,
10,
16,
6,
8,
1,
6,
8,
5,
0,
0,
8,
8,
13,
12,
8,
8,
9,
13,
12,
13,
8,
8,
8,
3,
16,
1,
6,
12,
13,
0,
0,
8,
13,
12,
13,
13,
0,
8,
13,
12,
13,
5,
8,
8,
1,
8,
16,
8,
13,
16,
13,
13,
8,
13,
12,
1,
6,
12,
13,
12,
3,
6,
16,
8,
8,
11,
3,
3,
16,
1,
6,
0,
16,
0,
0,
8,
8,
13,
9,
13,
13
] | [
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
1,
1,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
4,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
3,
4,
4,
0,
1,
0,
0,
3,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
29 | [
"Mosquitoes",
"were",
"allowed",
"to",
"feed",
"on",
"a",
"human",
",",
"then",
",",
"24",
"h",
"after",
"the",
"blood",
"feeding",
",",
"gut",
"sections",
"were",
"prepared",
"for",
"histology",
"and",
"stained",
"with",
"hematoxylin",
"and",
"eosin",
"(",
"HE",
")",
".",
"Compared",
"to",
"non",
"-",
"transgenic",
"midguts",
"which",
"were",
"filled",
"with",
"intact",
"erythrocytes",
"(",
"Figure",
"5A",
"and",
"5C",
")",
",",
"erythrocytes",
"in",
"the",
"midgut",
"of",
"transgenic",
"mosquito",
"were",
"extensively",
"hemolyzed",
"(",
"Figure",
"5B",
"and",
"5D",
")",
".",
"Lymphocytes",
"were",
"clearly",
"contrasted",
"in",
"the",
"midgut",
"of",
"transgenic",
"mosquito",
"(",
"Figure",
"5D",
")",
",",
"but",
"not",
"amongst",
"the",
"intact",
"erythrocytes",
"in",
"the",
"midgut",
"of",
"non",
"-",
"transgenic",
"mosquito",
"(",
"Figure",
"5C",
")",
".",
"These",
"results",
"are",
"consistent",
"with",
"the",
"data",
"shown",
"in",
"Figure",
"3C",
",",
"where",
"the",
"secretion",
"of",
"CEL",
"-",
"III",
"into",
"the",
"midgut",
"lumen",
"caused",
"effective",
"hemolysis",
"."
] | [
8,
3,
16,
1,
16,
1,
6,
8,
13,
2,
13,
9,
8,
1,
6,
8,
8,
13,
8,
8,
3,
16,
1,
8,
5,
16,
1,
8,
5,
8,
13,
12,
13,
13,
16,
1,
0,
13,
0,
8,
11,
3,
16,
1,
0,
8,
13,
12,
9,
5,
9,
13,
13,
8,
1,
6,
8,
1,
0,
8,
3,
2,
16,
13,
12,
9,
5,
9,
13,
13,
8,
3,
2,
16,
1,
6,
8,
1,
0,
8,
13,
12,
9,
13,
13,
5,
10,
1,
6,
0,
8,
1,
6,
8,
1,
0,
13,
0,
8,
13,
12,
9,
13,
13,
6,
8,
3,
0,
1,
6,
8,
16,
1,
12,
9,
13,
14,
6,
8,
1,
8,
13,
9,
1,
6,
8,
8,
16,
0,
8,
13
] | [
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
30 | [
"PM2.5",
",",
"fine",
"particulate",
"matter",
"(",
"particulate",
"matter",
"with",
"a",
"diameter",
"of",
"<",
"2.5",
"μm",
")",
"."
] | [
12,
13,
0,
0,
8,
13,
0,
8,
1,
6,
8,
1,
1,
9,
8,
13,
13
] | [
1,
0,
3,
4,
4,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
31 | [
"The",
"glycosphingolipid",
"isoglobotrihexosylceramide",
",",
"or",
"isogloboside",
"3",
"(",
"iGb3",
")",
",",
"is",
"believed",
"to",
"be",
"critical",
"for",
"natural",
"killer",
"T",
"(",
"NKT",
")",
"cell",
"development",
"and",
"self",
"-",
"recognition",
"in",
"mice",
"and",
"humans",
"."
] | [
6,
8,
8,
13,
5,
8,
9,
13,
12,
13,
13,
3,
16,
10,
3,
0,
1,
0,
8,
12,
13,
12,
13,
8,
8,
5,
8,
13,
8,
1,
8,
5,
8,
13
] | [
0,
0,
0,
0,
0,
3,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
32 | [
"Other",
"authors",
"[",
"16,17",
"]",
"have",
"proposed",
"different",
"methods",
"for",
"continuous",
"nICP",
"monitoring",
"based",
"on",
"the",
"waveform",
"analysis",
"of",
"cerebral",
"blood",
"flow",
"velocity",
"from",
"the",
"middle",
"cerebral",
"artery",
"(",
"MCA",
")",
"and",
"arterial",
"pressure",
"."
] | [
0,
8,
17,
17,
17,
3,
16,
0,
8,
1,
0,
12,
8,
16,
1,
6,
8,
8,
1,
0,
8,
8,
8,
1,
6,
0,
0,
8,
13,
12,
13,
5,
0,
8,
13
] | [
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
4,
0,
1,
0,
0,
0,
0,
0
] |
33 | [
"The",
"median",
"age",
"of",
"women",
"screened",
"was",
"25",
"years",
"(",
"interquartile",
"range",
"[",
"IQR",
"]",
":",
"22–29",
")",
",",
"8",
"%",
"(",
"105/1,271",
")",
"were",
"<",
"20",
"years",
"old",
",",
"and",
"49",
"%",
"(",
"627/1,271",
")",
"were",
"<",
"24",
"years",
"old",
";",
"82",
"%",
"(",
"1,026/1,271",
")",
"were",
"married",
",",
"and",
"more",
"than",
"a",
"third",
"(",
"427/1,271",
")",
"of",
"the",
"women",
"did",
"not",
"know",
"their",
"male",
"partners",
"’",
"HIV",
"status",
"(",
"Table",
"1",
")",
"."
] | [
6,
0,
8,
1,
8,
16,
3,
9,
8,
13,
0,
8,
13,
12,
13,
13,
9,
13,
13,
9,
8,
13,
9,
13,
3,
1,
9,
8,
0,
13,
5,
9,
8,
13,
9,
13,
3,
1,
9,
8,
0,
13,
9,
8,
13,
9,
13,
3,
0,
13,
5,
0,
1,
6,
0,
13,
9,
13,
1,
6,
8,
3,
10,
16,
11,
0,
8,
13,
12,
8,
13,
12,
9,
13,
13
] | [
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
34 | [
"In",
"a",
"'",
"status",
"quo",
"'",
"setting",
",",
"the",
"VMMC",
"program",
"could",
"be",
"accompanied",
"by",
"continuations",
"of",
"recent",
"trends",
"in",
"antiretroviral",
"therapy",
"(",
"ART",
")",
"scale",
"-",
"up",
",",
"with",
"constant",
"coverage",
"of",
"prevention",
"interventions",
"and",
"constant",
"rates",
"of",
"risk",
"and",
"(",
"non",
"-",
"VMMC",
")",
"protective",
"behaviors",
"."
] | [
1,
6,
13,
17,
17,
13,
8,
13,
6,
12,
8,
3,
3,
16,
1,
8,
1,
0,
8,
1,
0,
8,
13,
12,
13,
8,
0,
8,
13,
1,
0,
8,
1,
8,
8,
5,
0,
8,
1,
8,
5,
13,
0,
0,
12,
13,
0,
8,
13
] | [
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0
] |
35 | [
"This",
"study",
"included",
"31",
"women",
"who",
"delivered",
"small",
"for",
"gestational",
"age",
"(",
"SGA",
")",
"babies",
"(",
"SGA",
",",
"≤10th",
"percentile",
")",
",",
"28",
"who",
"delivered",
"large",
"for",
"gestational",
"age",
"(",
"LGA",
")",
"babies",
"(",
"≥90th",
"percentile",
")",
",",
"and",
"31",
"who",
"delivered",
"appropriate",
"for",
"gestational",
"age",
"(",
"AGA",
")",
"babies",
"(",
"controls",
",",
">",
"10th",
"to",
"<",
"90th",
"percentile",
")",
"."
] | [
6,
8,
16,
9,
8,
11,
16,
0,
1,
0,
8,
13,
12,
13,
8,
13,
12,
13,
0,
8,
13,
13,
9,
11,
16,
0,
1,
0,
8,
13,
12,
13,
8,
13,
0,
8,
13,
13,
5,
9,
11,
16,
0,
1,
0,
8,
13,
12,
13,
8,
13,
8,
13,
9,
0,
10,
9,
9,
8,
13,
13
] | [
0,
0,
0,
0,
0,
0,
0,
3,
4,
4,
4,
0,
1,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
4,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
4,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
36 | [
"Most",
"strikingly",
",",
"the",
"strongly",
"conserved",
"proline",
"(",
"Pro",
")",
"residue",
"at",
"site",
"283",
"in",
"NP",
"is",
"rendered",
"highly",
"unfit",
"by",
"HSF1",
"inhibition",
"at",
"febrile",
"temperatures",
"."
] | [
2,
2,
13,
6,
2,
16,
8,
13,
12,
13,
8,
1,
8,
9,
1,
12,
3,
16,
2,
0,
1,
12,
8,
1,
0,
8,
13
] | [
0,
0,
0,
0,
0,
0,
3,
0,
1,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0
] |
37 | [
"The",
"microRNA",
"(",
"miRNA",
")",
"miR-148a",
"is",
"a",
"17-",
"to",
"25",
"-",
"nucleotide",
"(",
"nt)-long",
"highly",
"conserved",
"single",
"-",
"stranded",
"non",
"-",
"coding",
"RNA",
"regulating",
"the",
"expression",
"of",
"target",
"genes",
"at",
"the",
"post",
"-",
"transcriptional",
"level",
"by",
"binding",
"to",
"the",
"complementary",
"sites",
"of",
"the",
"mRNA",
"of",
"specific",
"target",
"genes",
"[",
"4",
"]",
"."
] | [
6,
8,
13,
12,
13,
8,
3,
6,
9,
1,
9,
0,
8,
13,
0,
2,
0,
0,
0,
0,
0,
0,
0,
8,
16,
6,
8,
1,
8,
8,
1,
6,
0,
0,
0,
8,
1,
16,
1,
6,
0,
8,
1,
6,
8,
1,
0,
8,
8,
13,
9,
13,
13
] | [
0,
3,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
38 | [
"While",
"FGF",
"primarily",
"induces",
"the",
"Ras",
"–",
"Mitogen",
"-",
"Activated",
"Protein",
"Kinase",
"(",
"MAPK",
")",
"axis",
"to",
"promote",
"lens",
"cell",
"differentiation",
",",
"PDGF",
"preferentially",
"stimulates",
"Phosphoinositide",
"3",
"-",
"kinase",
"(",
"PI3",
")",
"to",
"enhance",
"Notch",
"signaling",
",",
"which",
"is",
"necessary",
"for",
"maintaining",
"the",
"lens",
"progenitor",
"cell",
"pool",
"."
] | [
14,
12,
2,
16,
6,
12,
13,
12,
13,
12,
12,
12,
13,
12,
13,
8,
10,
16,
8,
8,
8,
13,
12,
2,
16,
8,
9,
13,
8,
13,
12,
13,
10,
16,
8,
8,
13,
11,
3,
0,
1,
16,
6,
8,
8,
8,
8,
13
] | [
0,
1,
0,
0,
0,
0,
0,
3,
4,
4,
4,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
3,
4,
4,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
39 | [
"To",
"begin",
"to",
"establish",
"such",
"links",
"between",
"genotype",
"and",
"growth",
"phenotype",
",",
"we",
"developed",
"a",
"computer",
"model",
"for",
"the",
"intracellular",
"growth",
"of",
"vesicular",
"stomatitis",
"virus",
"(",
"VSV",
")",
",",
"a",
"well",
"-",
"studied",
",",
"nonsegmented",
",",
"negative",
"-",
"stranded",
"RNA",
"virus",
"."
] | [
10,
16,
10,
16,
0,
8,
1,
8,
5,
8,
8,
13,
11,
16,
6,
8,
8,
1,
6,
0,
8,
1,
8,
8,
8,
13,
12,
13,
13,
6,
2,
13,
16,
13,
0,
13,
0,
13,
0,
8,
8,
13
] | [
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
40 | [
"Legend",
":",
"HCV",
":",
"Chronic",
"hepatitis",
"C",
";",
"DAA",
":",
"Direct",
"-",
"acting",
"antivirals",
";",
"N",
":",
"Sample",
"size",
";",
"comorbidities",
":",
"Comorbidity",
";",
"comedications",
":",
"Comedication",
"."
] | [
8,
13,
12,
13,
0,
8,
8,
13,
12,
13,
2,
13,
16,
8,
13,
8,
13,
8,
8,
13,
8,
13,
8,
13,
8,
13,
8,
13
] | [
0,
0,
1,
0,
0,
0,
0,
0,
1,
0,
3,
4,
4,
4,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
41 | [
"Time",
"to",
"ART",
"initiation",
"was",
"estimated",
"using",
"cumulative",
"incidence",
"functions",
"(",
"CIFs",
"):",
"mortality",
"and",
"LTFU",
"were",
"considered",
"competing",
"events",
"to",
"ART",
"initiation",
"[",
"9",
"]",
",",
"while",
"those",
"transferred",
"out",
"were",
"right",
"-",
"censored",
",",
"with",
"the",
"assumption",
"that",
"they",
"remained",
"in",
"HIV",
"care",
"and",
"had",
"similar",
"outcomes",
"as",
"patients",
"still",
"in",
"observation",
"."
] | [
8,
1,
12,
8,
3,
16,
16,
0,
8,
8,
13,
12,
13,
8,
5,
12,
3,
16,
16,
8,
1,
12,
8,
13,
9,
13,
13,
14,
11,
16,
2,
3,
2,
13,
16,
13,
1,
6,
8,
14,
11,
16,
1,
12,
8,
5,
16,
0,
8,
1,
8,
2,
1,
8,
13
] | [
0,
0,
1,
0,
0,
0,
0,
3,
4,
4,
0,
1,
0,
0,
0,
1,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
42 | [
"FISH",
",",
"fluorescence",
"in",
"situ",
"hybridization",
"."
] | [
12,
13,
8,
1,
8,
8,
13
] | [
1,
0,
3,
4,
4,
4,
0
] |
43 | [
"We",
"included",
"those",
"with",
"follow",
"-",
"up",
"visits",
"and",
"pulmonary",
"function",
"tests",
"(",
"PFTs",
")",
"available",
"after",
"hospitalization",
"."
] | [
11,
16,
11,
1,
16,
13,
1,
8,
5,
0,
8,
8,
13,
12,
13,
0,
1,
8,
13
] | [
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
4,
0,
1,
0,
0,
0,
0,
0
] |
44 | [
"WT",
",",
"wild",
"type",
";",
"TG",
",",
"transgenic",
";",
"TSA",
",",
"total",
"salvianolic",
"acid",
";",
"n",
"=",
"20",
",",
"error",
"bars",
"represent",
"SEM",
".",
"*",
"p<0.05",
",",
"*",
"*",
"p<0.01",
"versus",
"WT",
"control",
"group",
";",
"#",
"p<0.05",
",",
"#",
"#",
"p<0.01",
"versus",
"vehicle",
"-",
"treated",
"APPswe",
"/",
"PS1dE9",
"transgenic",
"group",
"."
] | [
12,
13,
0,
8,
13,
12,
13,
0,
13,
12,
13,
0,
0,
8,
13,
8,
15,
9,
13,
8,
8,
16,
8,
13,
8,
9,
13,
8,
8,
9,
1,
12,
8,
8,
13,
15,
9,
13,
15,
15,
9,
1,
8,
13,
16,
12,
15,
12,
0,
8,
13
] | [
0,
0,
0,
0,
0,
1,
0,
0,
0,
1,
0,
3,
4,
4,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
45 | [
"M",
",",
"mirror",
";",
"P",
",",
"pinhole",
";",
"λ/2",
",",
"λ/2",
"plate",
";",
"PBS",
",",
"polarizing",
"beam",
"splitter",
";",
"EOM",
",",
"electro",
"optical",
"modulator",
";",
"S",
",",
"shutter",
";",
"F",
",",
"filter",
";",
"Pol",
",",
"polarizer",
";",
"DC",
",",
"dichroic",
"mirror",
"."
] | [
12,
13,
8,
13,
8,
13,
8,
13,
9,
13,
9,
8,
13,
12,
13,
16,
8,
8,
13,
12,
13,
0,
0,
8,
13,
8,
13,
8,
13,
8,
13,
8,
13,
12,
13,
8,
13,
8,
13,
0,
8,
13
] | [
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
3,
4,
4,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
46 | [
"In",
"the",
"third",
"group",
",",
"the",
"variables",
"related",
"to",
"resuming",
"dialysis",
"were",
":",
"Charlson",
"comorbidity",
"index",
"[",
"18",
"]",
";",
"dialysis",
"modality",
"and",
"access",
",",
"such",
"as",
"arterio",
"-",
"venous",
"(",
"AV",
")",
"fistula",
"as",
"access",
"for",
"hemodialysis",
",",
"venous",
"catheters",
",",
"or",
"peritoneal",
"catheters",
"for",
"peritoneal",
"dialysis",
";",
"and",
"biochemical",
"parameters",
"such",
"as",
"creatinine",
",",
"hemoglobin",
",",
"urea",
",",
"potassium",
",",
"ionic",
"calcium",
",",
"phosphorus",
",",
"parathormone",
"(",
"PTH",
")",
",",
"serum",
"albumin",
"and",
"C",
"-",
"reactive",
"protein",
"."
] | [
1,
6,
0,
8,
13,
6,
8,
16,
1,
16,
8,
3,
13,
12,
8,
8,
13,
9,
13,
13,
8,
8,
5,
8,
13,
0,
1,
0,
13,
0,
13,
12,
13,
8,
1,
8,
1,
8,
13,
0,
8,
13,
5,
0,
8,
1,
0,
8,
13,
5,
0,
8,
0,
1,
8,
13,
8,
13,
8,
13,
8,
13,
0,
8,
13,
8,
13,
8,
13,
12,
13,
13,
8,
8,
5,
8,
13,
0,
8,
13
] | [
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
47 | [
"HPD",
",",
"human",
"population",
"density",
"."
] | [
12,
13,
0,
8,
8,
13
] | [
1,
0,
3,
4,
4,
0
] |
48 | [
"PD",
";",
"the",
"ERK",
"inhibitor",
"PD98059",
".",
"β",
"-",
"Actin",
"served",
"as",
"an",
"input",
"control",
".",
"(",
"G",
")",
"Levels",
"of",
"inflammatory",
"response",
"markers",
"(",
"NF",
"-",
"κB",
"p65",
"activity",
"and",
"TNFα",
"and",
"IL-8",
"production",
",",
"by",
"ELISA",
")",
"in",
"control",
"medium",
"-",
"treated",
"or",
"CSE",
"-",
"exposed",
"H292",
"cells",
",",
"pretreated",
"with",
"either",
"Csn-B",
"(",
"10",
"μM",
")",
"or",
"Veh",
".",
"(",
"left",
"panel",
")",
"Spectrophotometric",
"reading",
"value",
"(",
"A450",
")",
"represents",
"NF",
"-",
"κB",
"p65",
"activity",
".",
"(",
"middle",
"and",
"right",
"panels",
")",
"The",
"levels",
"of",
"cytokine",
"and",
"chemokine",
"are",
"shown",
"as",
"protein",
"concentrations",
"(",
"pg",
")",
"in",
"ml",
"of",
"cell",
"culture",
"medium",
"."
] | [
12,
13,
6,
12,
8,
12,
13,
13,
13,
12,
16,
1,
6,
8,
8,
13,
13,
8,
13,
8,
1,
0,
8,
8,
13,
8,
13,
8,
8,
8,
5,
12,
5,
12,
8,
13,
1,
12,
13,
1,
8,
8,
13,
16,
5,
12,
13,
16,
12,
8,
13,
16,
1,
5,
12,
13,
9,
8,
13,
5,
12,
13,
13,
0,
8,
13,
0,
8,
8,
13,
8,
13,
16,
8,
13,
8,
8,
8,
13,
13,
0,
5,
0,
8,
13,
6,
8,
1,
8,
5,
8,
3,
16,
1,
8,
8,
13,
8,
13,
1,
8,
1,
8,
8,
8,
13
] | [
1,
0,
0,
0,
0,
3,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
49 | [
"The",
"EP3",
"receptor",
"as",
"a",
"PGE2",
"receptor",
",",
"same",
"as",
"the",
"other",
"types",
"of",
"EP",
"receptor",
"(",
"EP1",
"-",
"2",
"and",
"EP4",
")",
",",
"is",
"a",
"G",
"-",
"protein",
"-",
"coupled",
"receptor",
"(",
"GPCR",
")",
"[",
"23",
"]",
"and",
"specifically",
"contributes",
"to",
"the",
"cough",
"through",
"activating",
"airway",
"sensory",
"nerves",
"[",
"24",
",",
"25",
"]",
"."
] | [
6,
8,
8,
1,
6,
12,
8,
13,
0,
1,
6,
0,
8,
1,
12,
8,
13,
8,
13,
9,
5,
12,
13,
13,
3,
6,
12,
13,
8,
13,
16,
8,
13,
12,
13,
17,
9,
13,
5,
2,
16,
1,
6,
8,
1,
16,
8,
0,
8,
17,
9,
13,
9,
13,
13
] | [
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
4,
4,
4,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
50 | [
"G6PD",
",",
"glucose-6",
"-",
"phosphate",
"dehydrogenase",
"."
] | [
12,
13,
8,
13,
8,
8,
13
] | [
1,
0,
3,
4,
4,
4,
0
] |
51 | [
"Partial",
"least",
"squares",
"regression",
"(",
"PLSR",
")",
",",
"a",
"technique",
"previously",
"shown",
"to",
"be",
"useful",
"for",
"the",
"creation",
"of",
"signal",
"–",
"response",
"models",
"based",
"on",
"highly",
"dimensional",
"datasets",
",",
"was",
"used",
"to",
"correlate",
"phosphorylation",
"events",
"to",
"both",
"migration",
"and",
"proliferation",
"[",
"10",
"]",
"."
] | [
0,
0,
8,
8,
13,
12,
13,
13,
6,
8,
2,
16,
1,
3,
0,
1,
6,
8,
1,
8,
13,
8,
8,
16,
1,
2,
0,
8,
13,
3,
16,
1,
16,
8,
8,
1,
5,
8,
5,
8,
13,
9,
13,
13
] | [
3,
4,
4,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
52 | [
"Copper",
"(",
"Cu",
")",
"and",
"zinc",
"(",
"Zn",
")",
"are",
"essential",
"nutritional",
"metals",
"required",
"for",
"the",
"function",
"of",
"numerous",
"enzymatic",
"molecules",
"active",
"in",
"human",
"cell",
"metabolic",
"pathways",
"."
] | [
8,
13,
12,
13,
5,
8,
13,
12,
13,
3,
0,
0,
8,
16,
1,
6,
8,
1,
0,
0,
8,
0,
1,
0,
8,
0,
8,
13
] | [
3,
0,
1,
0,
0,
3,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
53 | [
"RNase",
"T",
"showed",
"in",
"in",
"vitro",
"experiments",
"that",
"it",
"can",
"serve",
"as",
"a",
"downstream",
"exonuclease",
"of",
"Endonuclease",
"V",
"(",
"alternative",
"EndoV)–mediated",
"base",
"excision",
"repair",
"(",
"AER",
")",
"[",
"33",
"]",
"."
] | [
8,
8,
16,
1,
1,
0,
8,
14,
11,
3,
16,
1,
6,
0,
8,
1,
8,
8,
13,
0,
12,
8,
8,
8,
13,
12,
13,
13,
9,
13,
13
] | [
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
0,
3,
1,
4,
4,
4,
0,
1,
0,
0,
0,
0,
0
] |
54 | [
"Interestingly",
",",
"incubation",
"of",
"parasites",
"in",
"the",
"presence",
"of",
"0.5",
"μM",
"Cytochalasin",
"D",
"(",
"CD",
";",
"a",
"drug",
"used",
"to",
"disrupt",
"F",
"-",
"actin",
")",
"did",
"not",
"result",
"in",
"significant",
"reduction",
"of",
"bead",
"translocation",
"(",
"Fig",
"1",
"G",
")",
",",
"confirming",
"that",
"retrograde",
"membrane",
"flow",
"can",
"occur",
"in",
"the",
"absence",
"of",
"a",
"functional",
"acto",
"-",
"myosin",
"system",
",",
"as",
"reported",
"previously",
"[",
"5",
"]",
"."
] | [
2,
13,
8,
1,
8,
1,
6,
8,
1,
9,
8,
8,
12,
13,
12,
13,
6,
8,
16,
10,
16,
8,
0,
8,
13,
3,
10,
16,
1,
0,
8,
1,
8,
8,
13,
8,
9,
8,
13,
13,
16,
14,
0,
8,
8,
3,
16,
1,
6,
8,
1,
6,
0,
8,
0,
8,
8,
13,
14,
16,
2,
17,
9,
13,
13
] | [
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
55 | [
"Focal",
"increases",
"in",
"fMRI",
"-",
"activity",
"were",
"observed",
"in",
"area",
"AIP",
",",
"consisting",
"of",
"both",
"aAIP",
"and",
"pAIP",
"(",
"Fig",
".",
"2A",
",",
"left",
"column",
",",
"first",
"and",
"second",
"row",
")",
",",
"in",
"the",
"anterior",
"lateral",
"bank",
"of",
"the",
"IPS",
".",
"Furthermore",
",",
"aAIP",
"-",
"EM",
"elicited",
"significant",
"fMRI",
"activations",
"in",
"the",
"medial",
"bank",
"of",
"the",
"IPS",
"(",
"area",
"MIP",
")",
",",
"in",
"area",
"PFG",
"in",
"the",
"rostral",
"portion",
"of",
"the",
"inferior",
"parietal",
"lobule",
",",
"in",
"the",
"most",
"anterior",
"sector",
"of",
"somatosensory",
"area",
"S2",
"and",
"in",
"ventral",
"premotor",
"cortex",
"(",
"PMv",
",",
"or",
"area",
"F5",
";",
"Fig",
".",
"2A",
",",
"left",
"column",
",",
"rows",
"2–5",
")",
"."
] | [
0,
8,
1,
12,
13,
8,
3,
16,
1,
8,
12,
13,
16,
1,
6,
12,
5,
12,
13,
8,
13,
9,
13,
0,
8,
13,
0,
5,
0,
8,
13,
13,
1,
6,
0,
0,
8,
1,
6,
12,
13,
2,
13,
12,
13,
12,
16,
0,
12,
8,
1,
6,
0,
8,
1,
6,
12,
13,
8,
12,
13,
13,
1,
8,
12,
1,
6,
0,
8,
1,
6,
0,
0,
8,
13,
1,
6,
2,
0,
8,
1,
0,
8,
12,
5,
1,
0,
0,
8,
13,
12,
13,
5,
8,
9,
13,
8,
13,
9,
13,
0,
8,
13,
8,
9,
13,
13
] | [
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
1,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
1,
0,
1,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
1,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
56 | [
"Here",
",",
"the",
"high",
"level",
"of",
"HR",
"is",
"due",
"to",
"the",
"programmed",
"formation",
"of",
"a",
"large",
"number",
"of",
"DNA",
"double",
"-",
"strand",
"breaks",
"(",
"DSBs",
")",
"[",
"4",
"]",
"."
] | [
2,
13,
6,
0,
8,
1,
12,
3,
0,
1,
6,
16,
8,
1,
6,
0,
8,
1,
8,
0,
13,
8,
8,
13,
12,
13,
13,
9,
13,
13
] | [
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
4,
4,
0,
1,
0,
0,
0,
0,
0
] |
57 | [
"Natural",
"killer",
"T",
"(",
"NKT",
")",
"cell",
"development",
"depends",
"on",
"recognition",
"of",
"self",
"-",
"glycolipids",
"via",
"their",
"semi",
"-",
"invariant",
"Vα14i",
"-",
"TCR",
".",
"However",
",",
"to",
"what",
"extent",
"TCR",
"-",
"mediated",
"signals",
"determine",
"identity",
"and",
"function",
"of",
"mature",
"NKT",
"cells",
"remains",
"incompletely",
"understood",
"."
] | [
0,
8,
12,
13,
12,
13,
8,
8,
16,
1,
8,
1,
8,
13,
8,
1,
11,
0,
13,
0,
8,
13,
12,
13,
2,
13,
10,
6,
8,
12,
13,
16,
8,
16,
8,
5,
8,
1,
0,
12,
8,
3,
2,
16,
13
] | [
3,
4,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0
] |
58 | [
"Inhalation",
"injury",
"predisposes",
"these",
"patients",
"to",
"respiratory",
"failure",
",",
"acute",
"respiratory",
"distress",
"syndrome",
"(",
"ARDS",
")",
",",
"and",
"pneumonia",
"."
] | [
8,
8,
16,
6,
8,
1,
0,
8,
13,
0,
0,
8,
8,
13,
12,
13,
13,
5,
8,
13
] | [
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
4,
4,
0,
1,
0,
0,
0,
0,
0
] |
59 | [
"In",
"support",
"of",
"this",
"idea",
"we",
"found",
"that",
"a",
"bacterially",
"expressed",
"p180",
"lysine",
"-",
"rich",
"region",
",",
"fused",
"to",
"glutathione",
"s",
"-",
"transferase",
"(",
"GST",
"-",
"p180",
"-",
"Lys",
";",
"Figure",
"7A",
")",
",",
"could",
"form",
"a",
"complex",
"with",
"a",
"32P",
"-",
"labeled",
"RNA",
"derived",
"from",
"the",
"human",
"insulin",
"SSCR",
"(",
"Figure",
"7B",
")",
".",
"In",
"contrast",
",",
"no",
"complex",
"was",
"formed",
"between",
"this",
"RNA",
"and",
"a",
"control",
"protein",
",",
"GST",
"-",
"Ran",
"(",
"Figure",
"7A",
"–",
"B",
")",
".",
"By",
"varying",
"the",
"amount",
"of",
"protein",
"in",
"our",
"binding",
"assay",
",",
"we",
"estimate",
"that",
"the",
"GST",
"-",
"p180",
"-",
"Lys",
"binds",
"to",
"RNA",
"with",
"an",
"affinity",
"of",
"about",
"0.8",
"µM."
] | [
1,
8,
1,
6,
8,
11,
16,
14,
6,
2,
16,
8,
8,
13,
0,
8,
13,
16,
1,
8,
8,
13,
8,
13,
12,
13,
8,
13,
12,
13,
12,
9,
13,
13,
3,
16,
6,
8,
1,
6,
8,
13,
16,
8,
16,
1,
6,
0,
8,
12,
13,
12,
9,
13,
13,
1,
8,
13,
6,
8,
3,
16,
1,
6,
8,
5,
6,
8,
8,
13,
12,
13,
12,
13,
12,
9,
13,
8,
13,
13,
1,
16,
6,
8,
1,
8,
1,
11,
16,
8,
13,
11,
16,
14,
6,
12,
13,
8,
13,
12,
16,
1,
8,
1,
6,
8,
1,
1,
9,
8
] | [
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
4,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
60 | [
"Here",
"we",
"report",
"the",
"modulation",
"of",
"the",
"structure",
"/",
"function",
"of",
"recombinant",
"Ace",
"by",
"small",
"molecule",
"calcium",
"-",
"activated",
"chloride",
"channel",
"(",
"CaCC",
")",
"inhibitors",
",",
"namely",
"CaCCinh",
"-",
"A01",
",",
"digallic",
"acid",
"(",
"DGA",
")",
"and",
"tannic",
"acid",
"."
] | [
2,
11,
16,
6,
8,
1,
6,
8,
15,
8,
1,
0,
12,
1,
0,
8,
8,
13,
16,
8,
8,
13,
12,
13,
8,
13,
2,
12,
13,
12,
13,
0,
8,
13,
12,
13,
5,
8,
8,
13
] | [
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
3,
4,
4,
4,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
0,
1,
0,
0,
0,
0,
0
] |
61 | [
"IMD",
",",
"Index",
"of",
"Multiple",
"Deprivation",
",",
"derived",
"from",
"the",
"Lower",
"Super",
"Output",
"Area",
"of",
"the",
"patient",
"’s",
"home",
"address",
";",
"IQR",
",",
"interquartile",
"range",
"."
] | [
12,
13,
12,
1,
0,
8,
13,
16,
1,
6,
12,
12,
12,
12,
1,
6,
8,
10,
8,
8,
13,
12,
13,
0,
8,
13
] | [
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
3,
4,
0
] |
62 | [
"Analyzed",
"parameter",
"were",
"immunoreactive",
"area",
"(",
"IR",
")",
"in",
"percent",
"of",
"the",
"ROI",
"area",
"and",
"summarized",
"object",
"intensity",
"in",
"a.u./mm2",
"."
] | [
16,
8,
3,
0,
8,
13,
12,
13,
1,
8,
1,
6,
8,
8,
5,
16,
8,
8,
1,
17,
13
] | [
0,
0,
0,
3,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
63 | [
"Bovine",
"serum",
"albumin",
"(",
"BSA",
")",
"medium",
",",
"containing",
"no",
"peptides",
",",
"was",
"used",
"as",
"a",
"negative",
"control",
"."
] | [
0,
8,
8,
13,
12,
13,
8,
13,
16,
6,
8,
13,
3,
16,
1,
6,
0,
8,
13
] | [
3,
4,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
64 | [
"Recently",
",",
"it",
"has",
"been",
"shown",
"that",
"PD-L1",
"intracytoplasmic",
"tail",
"can",
"trigger",
"a",
"signal",
"cascade",
"that",
"make",
"cancer",
"cells",
"resistant",
"to",
"interferon",
"(",
"IFN)-mediated",
"cytotoxicity",
"through",
"a",
"STAT3",
"/",
"caspase-7",
"-",
"dependent",
"pathway",
"[",
"16",
"]",
"."
] | [
2,
13,
11,
3,
3,
16,
11,
12,
0,
8,
3,
16,
6,
8,
8,
11,
16,
8,
8,
0,
1,
8,
13,
12,
8,
1,
6,
8,
15,
8,
13,
0,
8,
13,
9,
13,
13
] | [
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
65 | [
"Their",
"transcripts",
"were",
"generally",
"classified",
"into",
"two",
"groups",
"including",
"long",
"non",
"-",
"coding",
"RNAs",
"(",
"longer",
"than",
"200",
"nt",
")",
"and",
"small",
"RNAs",
"(",
"sRNAs",
",",
"shorter",
"than",
"200",
"nt",
")",
"."
] | [
11,
8,
3,
2,
16,
1,
9,
8,
16,
0,
0,
0,
0,
8,
13,
0,
1,
9,
8,
13,
5,
0,
8,
13,
12,
13,
0,
1,
9,
8,
13,
13
] | [
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0
] |
66 | [
"The",
"underlying",
"data",
"can",
"be",
"found",
"in",
"S1",
"Data",
".",
";",
"eFSGM",
",",
"extended",
"FSGM",
"FSGM",
";",
"FBA",
",",
"feature",
"-",
"based",
"attention",
";",
"HR",
",",
"hit",
"rate",
";",
"RT",
",",
"reaction",
"time",
"."
] | [
6,
16,
8,
3,
3,
16,
1,
12,
12,
13,
13,
12,
13,
0,
12,
12,
13,
12,
13,
8,
13,
16,
8,
13,
12,
13,
8,
8,
13,
12,
13,
8,
8,
13
] | [
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
3,
4,
1,
0,
1,
0,
3,
4,
4,
4,
0,
1,
0,
3,
4,
0,
1,
0,
3,
4,
0
] |
67 | [
"Results",
"of",
"logistic",
"regression",
"models",
"are",
"presented",
"using",
"adjusted",
"Odds",
"Ratio",
"(",
"aOR",
")",
"and",
"95",
"%",
"Confidence",
"Interval",
"(",
"95",
")",
".",
"To",
"handle",
"missing",
"data",
"of",
"two",
"covariates",
",",
"multivariate",
"logistic",
"regression",
"models",
"were",
"performed",
"using",
"multiple",
"imputation",
"[",
"45,46",
"]",
"."
] | [
8,
1,
0,
8,
8,
3,
16,
16,
0,
8,
12,
13,
12,
13,
5,
9,
8,
12,
8,
13,
12,
13,
13,
10,
16,
16,
8,
1,
9,
8,
13,
0,
0,
8,
8,
3,
16,
16,
0,
8,
17,
9,
13,
13
] | [
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
4,
0,
1,
0,
0,
3,
4,
4,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
68 | [
"F",
"-",
"actin",
"induction",
"was",
"plotted",
"as",
"mean",
"±",
"standard",
"error",
"of",
"the",
"mean",
"(",
"SEM",
")",
".",
"n",
"=",
"3",
".",
"*",
"p",
"≤",
"0.05",
",",
"*",
"*",
"*",
"p",
"≤",
"0.001",
".",
"(",
"D",
")",
"Time",
"-",
"lapse",
"total",
"internal",
"reflection",
"fluorescence",
"microscopy",
"(",
"TIRFM",
")",
"of",
"speckle",
"mCherry",
"-",
"β",
"-",
"actin",
"in",
"eNOS",
"and",
"G2A",
"T",
"cells",
",",
"stimulated",
"on",
"CD3",
"Ab",
"-",
"coated",
"chambers",
"."
] | [
8,
13,
8,
8,
3,
16,
1,
8,
15,
0,
8,
1,
6,
8,
13,
12,
13,
13,
8,
15,
9,
13,
13,
8,
13,
9,
13,
13,
13,
13,
8,
13,
9,
13,
13,
17,
13,
8,
13,
8,
0,
0,
8,
8,
8,
13,
12,
13,
1,
8,
8,
13,
13,
13,
8,
1,
12,
5,
8,
8,
8,
13,
16,
1,
12,
12,
13,
16,
8,
13
] | [
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
4,
4,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
69 | [
"Free",
"fatty",
"acid",
"(",
"FA",
")",
"and",
"polar",
"lipid",
"species",
"were",
"determined",
"in",
"flowers",
"and",
"caulinary",
"leaves",
"of",
"7",
"-",
"week",
"-",
"old",
",",
"mature",
"flowering",
"plants",
"."
] | [
0,
0,
8,
13,
12,
13,
5,
0,
8,
8,
3,
16,
1,
8,
5,
0,
8,
1,
9,
13,
8,
13,
0,
13,
0,
16,
8,
13
] | [
0,
3,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
70 | [
"The",
"substances",
"which",
"mainly",
"contributed",
"to",
"Ozone",
"layer",
"depletion",
"(",
"OLD",
")",
"were",
"Methane",
",",
"bromotrifluoro-",
",",
"Halon",
"1301",
"(",
"7.16E-06",
"kg",
"CFC-11",
"eq",
")",
"and",
"Methane",
",",
"trichlorofluoro",
"CFC-11",
"(",
"7.28559E-11",
"kg",
"CFC-11",
"eq",
")",
"."
] | [
6,
8,
11,
2,
16,
1,
12,
8,
8,
13,
12,
13,
3,
12,
13,
8,
13,
12,
9,
13,
9,
8,
8,
8,
13,
5,
12,
13,
8,
8,
13,
9,
8,
8,
8,
13,
13
] | [
0,
0,
0,
0,
0,
0,
3,
4,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
71 | [
"There",
"is",
"an",
"increasing",
"expectation",
"that",
"CHWs",
"will",
"participate",
"in",
"disease",
"surveillance",
"and",
"data",
"collection",
",",
"diagnosis",
"and",
"referral",
"for",
"care",
",",
"and",
"antiretroviral",
"therapy",
"(",
"ART",
")",
"provision",
"[",
"10",
"]",
"."
] | [
11,
16,
6,
16,
8,
14,
12,
3,
16,
1,
8,
8,
5,
8,
8,
13,
8,
5,
8,
1,
8,
13,
5,
0,
8,
13,
12,
13,
8,
13,
9,
13,
13
] | [
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
0,
1,
0,
0,
0,
0,
0,
0
] |
72 | [
"(",
"A",
")",
"Trimethoprim",
"+",
"sulfamethizole",
".",
"(",
"B",
")",
"Trimethoprim",
"+",
"AZT",
".",
"Synergistic",
"fractional",
"inhibitory",
"concentration",
"index",
"(",
"FICI",
")",
"values",
"(",
"≤0.5",
")",
"are",
"marked",
"with",
"yellow",
"bars",
",",
"and",
"nonsynergistic",
"(",
"FICI",
">",
"0.5",
")",
"FICI",
"values",
"are",
"marked",
"with",
"blue",
"bars",
"."
] | [
13,
17,
13,
8,
15,
8,
13,
13,
17,
13,
8,
15,
12,
13,
0,
0,
0,
8,
8,
13,
12,
13,
8,
13,
9,
13,
3,
16,
1,
0,
8,
13,
5,
0,
13,
12,
15,
9,
13,
12,
8,
3,
16,
1,
0,
8,
13
] | [
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
3,
4,
4,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0
] |
73 | [
"However",
",",
"Zbtb7a",
"is",
"not",
"restricted",
"to",
"NFκB",
"target",
"promoters",
",",
"and",
"indeed",
",",
"a",
"large",
"fraction",
"of",
"all",
"genomic",
"promoters",
"are",
"associated",
"with",
"overlapping",
"—",
"or",
"nearby",
"—",
"Zbtb7a",
"binding",
"(",
"up",
"to",
"17",
"%",
"or",
"41",
"%",
",",
"respectively",
",",
"of",
"all",
"promoters",
"in",
"fibroblasts",
";",
"Fig",
"2D",
")",
",",
"with",
"a",
"preference",
"for",
"guanine",
"-",
"cytosine",
"(",
"GC)-rich",
"and",
"CpG",
"island",
"(",
"CGI)-containing",
"promoters",
"(",
"S2H",
"and",
"S2I",
"Fig",
")",
"."
] | [
2,
13,
8,
3,
10,
16,
10,
12,
8,
8,
13,
5,
2,
13,
6,
0,
8,
1,
6,
0,
8,
3,
16,
1,
16,
13,
5,
0,
13,
8,
8,
13,
1,
10,
9,
13,
5,
9,
13,
13,
2,
13,
1,
6,
8,
1,
8,
13,
12,
9,
13,
13,
1,
6,
8,
1,
8,
13,
8,
13,
12,
5,
8,
8,
13,
12,
8,
13,
12,
5,
12,
12,
13,
13
] | [
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
4,
0,
1,
0,
3,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0
] |
74 | [
"LUSC",
"(",
"lung",
"squamous",
"cell",
"carcinoma",
")"
] | [
12,
13,
8,
0,
8,
8,
13
] | [
1,
0,
3,
4,
4,
4,
0
] |
75 | [
"Based",
"on",
"observations",
"in",
"Drosophila",
"[",
"5",
"]",
",",
"we",
"set",
"out",
"to",
"assess",
"the",
"role",
"of",
"stress",
"-",
"response",
"pathways",
",",
"particularly",
"of",
"heat",
"shock",
"protein",
"90",
"(",
"Hsp90",
")",
"function",
",",
"in",
"phenotype",
"modification",
",",
"using",
"zebrafish",
"as",
"a",
"vertebrate",
"model",
"."
] | [
16,
1,
8,
1,
12,
13,
9,
13,
13,
11,
16,
1,
10,
16,
6,
8,
1,
8,
13,
8,
8,
13,
2,
1,
8,
8,
8,
9,
13,
12,
13,
8,
13,
1,
8,
8,
13,
16,
8,
1,
6,
0,
8,
13
] | [
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
4,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
76 | [
"Driving",
"simulator",
"(",
"DS",
")",
"systems",
"have",
"advantages",
"in",
"controlling",
"traffic-",
"and",
"automobile",
"-",
"related",
"conditions",
"[",
"1,13,14",
"]",
"."
] | [
16,
8,
13,
12,
13,
8,
16,
8,
1,
16,
8,
5,
8,
13,
16,
8,
13,
9,
13,
13
] | [
3,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
77 | [
"We",
"assumed",
"a",
"50",
"%",
"proportion",
",",
"80",
"%",
"power",
",",
"95",
"%",
"confidence",
"interval",
"(",
"CI",
")",
"and",
"5",
"%",
"precision",
"."
] | [
11,
16,
6,
9,
8,
8,
13,
9,
8,
8,
13,
9,
8,
8,
8,
13,
12,
13,
5,
9,
8,
8,
13
] | [
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
0,
1,
0,
0,
0,
0,
0,
0
] |
78 | [
"All",
"known",
"AP",
"endonucleases",
"are",
"grouped",
"in",
"two",
"distinct",
"superfamilies",
"based",
"on",
"their",
"structural",
"and",
"sequence",
"similarity",
"to",
"either",
"Escherichia",
"coli",
"exonuclease",
"III",
"(",
"Xth",
";",
"Endonuclease",
"—",
"Exonuclease",
"—",
"Phosphatase",
"superfamily",
",",
"or",
"EEP",
")",
"or",
"endonuclease",
"IV",
"(",
"Nfo",
")",
"[",
"10",
"]",
"."
] | [
6,
16,
12,
8,
3,
16,
1,
9,
0,
8,
16,
1,
11,
0,
5,
8,
8,
1,
5,
12,
12,
8,
9,
13,
12,
13,
8,
13,
8,
13,
8,
8,
13,
5,
12,
13,
5,
8,
9,
13,
12,
13,
13,
9,
13,
13
] | [
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
4,
4,
0,
1,
0,
3,
4,
4,
4,
4,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
79 | [
"Arm",
",",
"Armadillo",
";",
"bGal",
",",
"beta",
"-",
"galactosidase",
";",
"Cyt",
"-Arm",
",",
"Cytoplasm",
"-",
"Armadillo",
";",
"GBSC",
",",
"glioblastoma",
"multiforme",
"stem",
"-",
"like",
"cell",
";",
"GFP",
",",
"green",
"fluorescent",
"protein",
";",
"igl",
",",
"igloo",
";",
"myrRFP",
",",
"myristoilated",
"Red",
"Fluorescent",
"Protein",
";",
"nkd",
",",
"-lacZnkd",
",",
"transcriptional",
"beta",
"-",
"galactosidase",
"reporter",
"of",
"naked",
"gene",
"NLGN3",
";",
"NMRI",
",",
"Naval",
"Medical",
"Research",
"Institute",
"."
] | [
12,
13,
12,
13,
12,
13,
8,
13,
8,
13,
12,
12,
13,
8,
13,
12,
13,
12,
13,
8,
0,
8,
13,
0,
8,
13,
12,
13,
0,
0,
8,
13,
12,
13,
8,
13,
12,
13,
12,
12,
12,
12,
13,
12,
13,
12,
13,
0,
8,
13,
8,
8,
1,
0,
8,
12,
13,
12,
13,
12,
12,
12,
12,
13
] | [
1,
0,
3,
0,
1,
0,
3,
4,
4,
0,
1,
1,
0,
0,
0,
3,
0,
1,
0,
3,
4,
4,
4,
4,
4,
0,
1,
0,
3,
4,
4,
0,
1,
0,
3,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
1,
0,
0,
3,
4,
4,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
80 | [
"Very",
"-",
"long",
"-",
"chain",
"fatty",
"acid",
"(",
"VLCFA",
")",
"accumulation",
"has",
"long",
"been",
"suggested",
"as",
"a",
"major",
"disease",
"-",
"mediating",
"factor",
",",
"although",
"the",
"exact",
"pathological",
"consequences",
"are",
"unclear",
"."
] | [
2,
13,
2,
13,
8,
0,
8,
13,
12,
13,
8,
3,
2,
3,
16,
1,
6,
0,
8,
13,
16,
8,
13,
14,
6,
0,
0,
8,
3,
0,
13
] | [
3,
4,
4,
4,
4,
4,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
81 | [
"Unexpectedly",
",",
"we",
"found",
"that",
"Notch1",
"-",
"expressing",
"cells",
"invariably",
"lacked",
"the",
"expression",
"of",
"ERα",
"and",
"PR",
"(",
"Fig",
".",
"2F",
",",
"G",
")",
",",
"and",
"we",
"confirmed",
"these",
"results",
"by",
"quantitative",
"Real",
"Time",
"Polymerase",
"Chain",
"Reaction",
"(",
"qRT",
")",
"in",
"sorted",
"-PCRGFP",
"-",
"labeled",
"cells",
"(",
"S3B",
",",
"C",
"Fig",
".",
")",
"."
] | [
2,
13,
11,
16,
14,
8,
13,
16,
8,
2,
16,
6,
8,
1,
12,
5,
12,
13,
12,
13,
9,
13,
8,
13,
13,
5,
11,
16,
6,
8,
1,
0,
0,
8,
12,
12,
12,
13,
12,
13,
1,
0,
12,
13,
16,
8,
13,
12,
13,
12,
12,
13,
13,
13
] | [
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
4,
4,
4,
4,
0,
1,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
82 | [
"In",
"RSV",
"infected",
"animals",
"treated",
"with",
"EGY-2",
",",
"alveolar",
"macrophages",
"(",
"AM",
")",
"in",
"the",
"high",
"dose",
"group",
"showed",
"a",
"markedly",
"enhanced",
"phagocytic",
"function",
"at",
"the",
"early",
"phase",
"of",
"infection",
",",
"as",
"both",
"the",
"number",
"of",
"phagocytic",
"AM",
"as",
"well",
"as",
"their",
"phagocytic",
"activity",
"was",
"significantly",
"enhanced",
"compared",
"to",
"untreated",
"animals",
"on",
"day",
"1",
"p.i",
".",
"(",
"Fig",
"4A",
"and",
"4B",
",",
"respectively",
")",
"."
] | [
1,
12,
16,
8,
16,
1,
12,
13,
0,
8,
13,
12,
13,
1,
6,
0,
8,
8,
16,
6,
2,
16,
0,
8,
1,
6,
0,
8,
1,
8,
13,
1,
5,
6,
8,
1,
0,
12,
1,
2,
1,
11,
0,
8,
3,
2,
16,
16,
1,
0,
8,
1,
8,
9,
12,
13,
13,
8,
9,
5,
8,
13,
2,
13,
13
] | [
0,
1,
0,
0,
0,
0,
1,
0,
3,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
83 | [
"Finally",
",",
"as",
"a",
"sensitivity",
"analysis",
",",
"we",
"constructed",
"five",
"different",
"genetic",
"pigmentation",
"scores",
",",
"one",
"for",
"each",
"pigmentation",
"trait",
"(",
"eye",
"color",
",",
"hair",
"color",
",",
"skin",
"phototype",
",",
"and",
"the",
"presence",
"of",
"freckles",
"and",
"tanning",
")",
",",
"from",
"our",
"data",
"(",
"S2",
"Table",
")",
"we",
"analyzed",
"their",
"relationship",
"with",
"cancer",
"in",
"the",
"same",
"way",
"we",
"have",
"described",
"for",
"the",
"GPS",
"."
] | [
2,
13,
1,
6,
8,
8,
13,
11,
16,
9,
0,
0,
8,
8,
13,
9,
1,
6,
8,
8,
13,
8,
8,
13,
8,
8,
13,
8,
8,
13,
5,
6,
8,
1,
8,
5,
8,
13,
13,
1,
11,
8,
13,
12,
12,
13,
11,
16,
11,
8,
1,
8,
1,
6,
0,
8,
11,
3,
16,
1,
6,
12,
13
] | [
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
4,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0
] |
84 | [
"SDQ",
",",
"Strengths",
"and",
"Difficulties",
"Questionnaire",
"."
] | [
12,
13,
8,
5,
8,
8,
13
] | [
1,
0,
3,
4,
4,
4,
0
] |
85 | [
"In",
"Drosophila",
",",
"the",
"family",
"of",
"gustatory",
"receptors",
"(",
"Grs",
")",
"is",
"predicted",
"to",
"consist",
"of",
"68",
"genes",
"[",
"4],[5",
"]",
"."
] | [
1,
12,
13,
6,
8,
1,
0,
8,
13,
12,
13,
3,
16,
10,
16,
1,
9,
8,
13,
9,
13,
13
] | [
0,
0,
0,
0,
0,
0,
3,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
86 | [
"DIC",
",",
"differential",
"interference",
"contrast",
";",
"SM",
",",
"Sperm",
"Medium",
"."
] | [
12,
13,
0,
8,
8,
13,
12,
13,
8,
8,
13
] | [
1,
0,
3,
4,
4,
0,
0,
0,
0,
0,
0
] |
87 | [
"In",
"October",
"2018",
",",
"we",
"published",
"a",
"systematic",
"review",
"of",
"clinical",
"practice",
"guidelines",
"(",
"CPG",
")",
"that",
"provide",
"recommendations",
"for",
"the",
"care",
"and",
"prevention",
"of",
"adverse",
"events",
"associated",
"with",
"vascular",
"catheter",
"in",
"adults",
"."
] | [
1,
12,
9,
13,
11,
16,
6,
0,
8,
1,
0,
8,
8,
13,
12,
13,
11,
16,
8,
1,
6,
8,
5,
8,
1,
0,
8,
16,
1,
0,
8,
1,
8,
13
] | [
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
88 | [
"Aptima",
"HIV-1",
"Aptima",
"Quant",
"Dx",
"assay"
] | [
12,
8,
12,
8,
8,
8
] | [
3,
4,
1,
4,
4,
4
] |
89 | [
"Equation",
"2",
":",
"Where",
"RMSE",
"is",
"root",
"mean",
"square",
"error",
",",
"Yi",
"is",
"ANN",
"predicted",
"values",
";",
"yi",
"is",
"experimental",
"values",
";",
"n",
"is",
"number",
"of",
"predictions",
"."
] | [
8,
9,
13,
14,
12,
3,
8,
0,
0,
8,
13,
12,
3,
12,
16,
8,
13,
12,
3,
0,
8,
13,
8,
3,
8,
1,
8,
13
] | [
0,
0,
0,
0,
1,
0,
3,
4,
4,
4,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
90 | [
"Various",
"platforms",
",",
"such",
"as",
"IHC",
",",
"SS",
",",
"pyrosequencing",
"(",
"PS",
")",
",",
"and",
"HRM",
",",
"are",
"available",
"to",
"analyze",
"genetic",
"mutation",
"profiles",
"in",
"clinical",
"tissue",
"samples",
"."
] | [
0,
8,
13,
0,
1,
12,
13,
12,
13,
8,
13,
12,
13,
13,
5,
12,
13,
3,
0,
10,
16,
0,
8,
8,
1,
0,
8,
8,
13
] | [
0,
0,
0,
0,
0,
1,
0,
1,
0,
3,
0,
1,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
91 | [
"One",
"compound",
"seemed",
"a",
"particularly",
"promising",
"candidate",
"for",
"this",
"sort",
"of",
"approach",
":",
"thiabendazole",
"(",
"TBZ",
")",
",",
"which",
"has",
"been",
"in",
"clinical",
"use",
"as",
"a",
"systemic",
"antifungal",
"and",
"deworming",
"treatment",
"for",
"40",
"years",
"."
] | [
9,
8,
16,
6,
2,
0,
8,
1,
6,
8,
1,
8,
13,
8,
13,
12,
13,
13,
11,
3,
3,
1,
0,
8,
1,
6,
0,
0,
5,
8,
8,
1,
9,
8,
13
] | [
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
92 | [
"Though",
"long",
"endemic",
"in",
"the",
"southeastern",
"U.S.",
",",
"raccoon",
"rabies",
"expanded",
"rapidly",
"along",
"the",
"eastern",
"seaboard",
"during",
"the",
"1980s",
"and",
"1990s",
"from",
"an",
"initial",
"focus",
"along",
"the",
"West",
"Virginia",
"–",
"Virginia",
"border",
";",
"the",
"initial",
"focus",
"was",
"linked",
"to",
"the",
"long",
"-",
"distance",
"translocation",
"(",
"LDT",
")",
"of",
"rabid",
"animals",
"from",
"Florida",
"[",
"5",
"]",
"."
] | [
14,
0,
0,
1,
6,
0,
12,
13,
8,
8,
16,
2,
1,
6,
0,
8,
1,
6,
8,
5,
8,
1,
6,
0,
8,
1,
6,
12,
12,
13,
12,
8,
13,
6,
0,
8,
3,
16,
1,
6,
0,
13,
8,
8,
13,
12,
13,
1,
0,
8,
1,
12,
13,
9,
13,
13
] | [
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
4,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
93 | [
"(",
"A",
")",
"Two",
"-",
"dimensional",
"representation",
"of",
"the",
"mTufA",
"5′",
"UTR",
".",
"The",
"RNAfold",
"algorithm",
"predicted",
"three",
"structured",
"regions",
":",
"SR",
"I",
"(",
"pink",
")",
",",
"SR",
"II",
"(",
"violet",
")",
",",
"SR",
"IIIa",
"(",
"yellow",
")",
",",
"and",
"SR",
"IIIb",
"(",
"green",
")",
"."
] | [
13,
17,
13,
9,
13,
0,
8,
1,
6,
12,
9,
8,
13,
6,
0,
8,
16,
9,
16,
8,
13,
12,
8,
13,
8,
13,
13,
12,
12,
13,
0,
13,
13,
12,
8,
13,
0,
13,
13,
5,
12,
8,
13,
8,
13,
13
] | [
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
3,
4,
0,
1,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0
] |
94 | [
"However",
",",
"in",
"some",
"studies",
",",
"we",
"investigated",
"the",
"effects",
"of",
"gp120",
"on",
"MDDC",
"that",
"were",
"simultaneously",
"induced",
"to",
"mature",
"by",
"other",
"stimuli",
",",
"notably",
"lipopolysaccharide",
"(",
"LPS",
")",
"."
] | [
2,
13,
1,
6,
8,
13,
11,
16,
6,
8,
1,
8,
1,
12,
11,
3,
2,
16,
10,
16,
1,
0,
8,
13,
2,
8,
13,
12,
13,
13
] | [
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
0,
1,
0,
0
] |
95 | [
"The",
"red",
"dots",
"represents",
"LCI",
",",
"the",
"bright",
"yellow",
"rectangle",
"represents",
"RV",
",",
"and",
"the",
"black",
"triangle",
"represents",
"the",
"/TLCnLCI",
".",
"LCI",
":",
"lung",
"clearance",
"index",
";",
"RV",
":",
"the",
"ratio",
"of",
"residual",
"volume",
"to",
"total",
"lung",
"capacity",
";",
"/TLCnLCI",
":",
"normalized",
"lung",
"clearance",
"index",
"."
] | [
6,
0,
8,
16,
12,
13,
6,
0,
0,
8,
16,
12,
13,
5,
6,
0,
8,
16,
6,
12,
13,
12,
13,
8,
8,
8,
13,
12,
13,
6,
8,
1,
0,
8,
1,
0,
8,
8,
13,
12,
13,
0,
8,
8,
8,
13
] | [
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
1,
0,
0,
0,
0,
0,
0,
0,
1,
0,
1,
0,
3,
4,
4,
0,
1,
0,
3,
4,
4,
4,
4,
4,
4,
4,
4,
0,
1,
0,
3,
3,
4,
4,
0
] |
96 | [
"The",
"drug",
"utilisation",
"(",
"DU",
")",
"90",
"%",
"methodology",
"was",
"used",
"to",
"present",
"the",
"antibiotics",
"accounting",
"for",
"90",
"%",
"of",
"all",
"antibiotics",
"prescribed",
"[",
"19",
"]",
"."
] | [
6,
8,
8,
13,
12,
13,
9,
8,
8,
3,
16,
10,
16,
6,
8,
16,
1,
9,
8,
1,
6,
8,
16,
13,
9,
13,
13
] | [
0,
3,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
97 | [
"AC",
"and",
"CaM",
"peptides",
"were",
"separated",
"over",
"an",
"8",
"-",
"min",
"gradient",
"of",
"5%–40",
"%",
"acetonitrile",
"(",
"ACN",
")",
"at",
"40",
"μL",
"/",
"min",
"and",
"at",
"0",
"°",
"C",
"."
] | [
12,
5,
12,
8,
3,
16,
1,
6,
9,
13,
8,
8,
1,
9,
8,
8,
13,
12,
13,
1,
9,
8,
15,
8,
5,
1,
9,
8,
8,
13
] | [
1,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
3,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
98 | [
"In",
"this",
"regard",
",",
"the",
"concept",
"of",
"mild",
"cognitive",
"impairment",
"(",
"MCI",
")",
"is",
"interesting",
"since",
"it",
"is",
"seen",
"as",
"a",
"transitional",
"zone",
"between",
"normal",
"aging",
"and",
"dementia",
"."
] | [
1,
6,
8,
13,
6,
8,
1,
0,
0,
8,
13,
12,
13,
3,
0,
14,
11,
3,
16,
1,
6,
0,
8,
1,
0,
8,
5,
8,
13
] | [
0,
0,
0,
0,
0,
0,
0,
3,
4,
4,
0,
1,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
] |
99 | [
"The",
"quantity",
"ρ",
"is",
"the",
"atmospheric",
"density",
"depending",
"on",
"altitude",
"and",
"temperature"
] | [
6,
8,
13,
3,
6,
0,
8,
16,
1,
8,
5,
8
] | [
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
3
] |
PLOD: An Abbreviation Detection Dataset
This is the repository for PLOD Dataset published at LREC 2022. The dataset can help build sequence labelling models for the task Abbreviation Detection.
Dataset
We provide two variants of our dataset - Filtered and Unfiltered. They are described in our paper here.
The Filtered version can be accessed via Huggingface Datasets here and a CONLL format is present here.
The Unfiltered version can be accessed via Huggingface Datasets here and a CONLL format is present here.
The SDU Shared Task data we use for zero-shot testing is available here.
Dataset Card for PLOD-unfiltered
Dataset Summary
This PLOD Dataset is an English-language dataset of abbreviations and their long-forms tagged in text. The dataset has been collected for research from the PLOS journals indexing of abbreviations and long-forms in the text. This dataset was created to support the Natural Language Processing task of abbreviation detection and covers the scientific domain.
Supported Tasks and Leaderboards
This dataset primarily supports the Abbreviation Detection Task. It has also been tested on a train+dev split provided by the Acronym Detection Shared Task organized as a part of the Scientific Document Understanding (SDU) workshop at AAAI 2022.
Languages
English
Dataset Structure
Data Instances
A typical data point comprises an ID, a set of tokens
present in the text, a set of pos_tags
for the corresponding tokens obtained via Spacy NER, and a set of ner_tags
which are limited to AC
for Acronym
and LF
for long-forms
.
An example from the dataset: {'id': '1', 'tokens': ['Study', '-', 'specific', 'risk', 'ratios', '(', 'RRs', ')', 'and', 'mean', 'BW', 'differences', 'were', 'calculated', 'using', 'linear', 'and', 'log', '-', 'binomial', 'regression', 'models', 'controlling', 'for', 'confounding', 'using', 'inverse', 'probability', 'of', 'treatment', 'weights', '(', 'IPTW', ')', 'truncated', 'at', 'the', '1st', 'and', '99th', 'percentiles', '.'], 'pos_tags': [8, 13, 0, 8, 8, 13, 12, 13, 5, 0, 12, 8, 3, 16, 16, 0, 5, 0, 13, 0, 8, 8, 16, 1, 8, 16, 0, 8, 1, 8, 8, 13, 12, 13, 16, 1, 6, 0, 5, 0, 8, 13], 'ner_tags': [0, 0, 0, 3, 4, 0, 1, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 3, 4, 4, 4, 4, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0] }
Data Fields
- id: the row identifier for the dataset point.
- tokens: The tokens contained in the text.
- pos_tags: the Part-of-Speech tags obtained for the corresponding token above from Spacy NER.
- ner_tags: The tags for abbreviations and long-forms.
Data Splits
Train | Valid | Test | |
---|---|---|---|
Filtered | 112652 | 24140 | 24140 |
Unfiltered | 113860 | 24399 | 24399 |
Dataset Creation
Source Data
Initial Data Collection and Normalization
Extracting the data from PLOS Journals online and then tokenization, normalization.
Who are the source language producers?
PLOS Journal
Additional Information
Dataset Curators
The dataset was initially created by Leonardo Zilio, Hadeel Saadany, Prashant Sharma, Diptesh Kanojia, Constantin Orasan.
Licensing Information
CC-BY-SA 4.0
Citation Information
[Needs More Information]
Installation
We use the custom NER pipeline in the spaCy transformers library to train our models. This library supports training via any pre-trained language models available at the :rocket: HuggingFace repository.
Please see the instructions at these websites to setup your own custom training with our dataset to reproduce the experiments using Spacy.
OR
However, you can also reproduce the experiments via the Python notebook we provide here which uses HuggingFace Trainer class to perform the same experiments. The exact hyperparameters can be obtained from the models readme cards linked below. Before starting, please perform the following steps:
git clone https://github.com/surrey-nlp/PLOD-AbbreviationDetection
cd PLOD-AbbreviationDetection
pip install -r requirements.txt
Now, you can use the notebook to reproduce the experiments.
Model(s)
Our best performing models are hosted on the HuggingFace models repository:
Models | PLOD - Unfiltered |
PLOD - Filtered |
Description |
---|---|---|---|
RoBERTalarge | RoBERTalarge-finetuned-abbr | -soon- | Fine-tuning on the RoBERTalarge language model |
RoBERTabase | -soon- | RoBERTabase-finetuned-abbr | Fine-tuning on the RoBERTabase language model |
AlBERTlarge-v2 | AlBERTlarge-v2-finetuned-abbDet | -soon- | Fine-tuning on the AlBERTlarge-v2 language model |
On the link provided above, the model(s) can be used with the help of the Inference API via the web-browser itself. We have placed some examples with the API for testing.
Usage
You can use the HuggingFace Model link above to find the instructions for using this model in Python locally using the notebook provided in the Git repo.
- Downloads last month
- 66