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Datasets:
ptsw
/
ref_seq_viral_tandemrepeats

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id
stringlengths
11
11
start_pos
int64
1
2.47M
end_pos
int64
16
2.47M
motif_seq
stringlengths
8
100
motif_length
int64
8
100
repeats
int64
2
96
ltr_length
int64
16
2.42k
__index_level_0__
int64
0
1.24k
NC_029550.1
1,282
1,299
TATATTTCT
9
2
18
0
NC_029553.1
111
126
TTTAATTC
8
2
16
0
NC_029554.1
327
342
TTTTTTTG
8
2
16
0
NC_029554.1
1,392
1,411
TATCTTTTGT
10
2
20
1
NC_029558.1
1,497
1,514
AATATAACT
9
2
18
0
NC_029559.1
184
203
ATTTTTTAAT
10
2
20
0
NC_029559.1
204
255
TTTTTTGATTTTTATGATTTTTTAAT
26
2
52
1
NC_029560.1
299
314
TTTTTTTG
8
2
16
0
NC_029560.1
326
341
TTTTTTGA
8
2
16
1
NC_029561.1
1,672
1,691
TTTGTCTGGT
10
2
20
0
NC_029571.1
176
191
TTTTTTTG
8
2
16
0
NC_029571.1
346
361
TTTTTTTG
8
2
16
1
NC_029571.1
420
437
AATATTCTA
9
2
18
2
NC_029571.1
905
920
TCTTCATA
8
2
16
3
NC_029573.1
198
217
ATTTTTTTGG
10
2
20
0
NC_029573.1
384
419
ATTTTTTTATTTTTTATT
18
2
36
1
NC_029566.1
1,699
1,716
TAAGTTTTT
9
2
18
0
NC_029557.1
1,256
1,271
AAAAAAAC
8
2
16
0
NC_029574.1
1,181
1,196
TCAAAAAA
8
2
16
0
NC_029578.1
513
530
TGAGCATGC
9
2
18
0
NC_029648.1
450
467
CAGGATGTA
9
2
18
0
NC_017994.1
3,823
3,840
ACAGGTGGC
9
2
18
0
NC_017995.1
1,887
1,904
TGTAATGAA
9
2
18
0
NC_029800.1
902
917
TATATATG
8
2
16
0
NC_029800.1
1,959
1,974
GGTTTTTT
8
2
16
1
NC_038232.1
1,166
1,187
TAAAATAAAAA
11
2
22
0
NC_038232.1
4,684
4,699
TCTTCATG
8
2
16
1
NC_018071.1
562
577
AAAATCAC
8
2
16
0
NC_018071.1
1,597
1,626
TTTTTATTTTATTTA
15
2
30
1
NC_018071.1
1,644
1,663
TATATAATTA
10
2
20
2
NC_029853.1
6,309
6,324
GACCCGGT
8
2
16
0
NC_029853.1
7,733
7,760
CAGTTAAAGATTAA
14
2
28
1
NC_029852.1
7,342
7,457
ACTCTGTAATAGTTCAATTACATAACCAG
29
4
116
0
NC_018076.1
60
77
TGTATGTCC
9
2
18
0
NC_029996.1
2,377
2,392
TTTTAAAA
8
2
16
0
NC_029996.1
19,050
19,069
CTTGAACTAT
10
2
20
1
NC_029996.1
80,962
81,003
GTAGCACAATTATCATCTTGG
21
2
42
2
NC_029996.1
104,081
104,096
CGCGTTTT
8
2
16
3
NC_029996.1
105,078
105,095
TAACCTTTT
9
2
18
4
NC_029996.1
106,439
106,456
AGCTATTTT
9
2
18
5
NC_029996.1
131,414
131,461
CACCTGCGGTTGATAATATATCAA
24
2
48
6
NC_029995.1
452
469
CAGGATGTA
9
2
18
0
NC_029997.2
9,525
9,542
TTTATCACA
9
2
18
0
NC_029997.2
43,005
43,020
AAAAATTG
8
2
16
1
NC_029997.2
51,863
51,880
ATTGTTCAA
9
2
18
2
NC_029997.2
57,825
57,848
TAAAATCGATTT
12
2
24
3
NC_029997.2
78,456
78,473
AAATGCTGC
9
2
18
4
NC_029936.1
1,700
1,727
TTTATATAAACATA
14
2
28
0
NC_029931.1
2,930
2,947
CAATGGAAG
9
2
18
0
NC_029931.1
9,568
9,583
TCTGAGAA
8
2
16
1
NC_036636.1
8,044
8,059
GGACCTAT
8
2
16
0
NC_035887.1
2,522
2,539
TGGGGGTAC
9
2
18
0
NC_035888.1
2,307
2,324
TCTGGGTTT
9
2
18
0
NC_035888.1
2,480
2,497
TGGGGGTAC
9
2
18
1
NC_029917.1
1,797
1,814
TCTGACTTT
9
2
18
0
NC_029917.1
2,516
2,533
ACCTTTGCA
9
2
18
1
NC_029907.1
600
617
TGAAGGCAA
9
2
18
0
NC_029907.1
1,041
1,056
GAAAAAAA
8
2
16
1
NC_029907.1
1,177
1,203
AAAAAAAAG
9
3
27
2
NC_029907.1
1,205
1,222
AGTGGTCCC
9
2
18
3
NC_037582.1
1,896
1,911
GTCTACCT
8
2
16
0
NC_030126.1
1,352
1,369
CCAGCAGAC
9
2
18
0
NC_030126.1
2,386
2,407
ATTGATTCCGA
11
2
22
1
NC_030117.1
127
222
TCCCATAACCCC
12
8
96
0
NC_030117.1
11,988
12,007
TAGGGTGGGG
10
2
20
1
NC_030117.1
12,049
12,066
ATATATTTA
9
2
18
2
NC_030117.1
12,269
12,286
ACCAAGACG
9
2
18
3
NC_030117.1
12,463
12,486
ATGAGAGTGATC
12
2
24
4
NC_030117.1
16,274
16,462
TATCAACACCCGCGGAGAACAAGCTCCAGAATTCAGTCCACGGAGTCTGAGTCTAATTTTGAC
63
3
189
5
NC_030117.1
32,392
32,409
AATATTATT
9
2
18
6
NC_030117.1
35,395
35,664
AAACAACCAACCACAGTCCAGCAACCCGCC
30
9
270
7
NC_030117.1
36,167
36,286
CCAAGAACCTCAGCGTCCCAGAGT
24
5
120
8
NC_030117.1
36,297
36,608
CAGCGACGGGGAACCCGAGGACGC
24
13
312
9
NC_030117.1
48,211
48,228
TATAAATTT
9
2
18
10
NC_030117.1
56,532
56,549
TCACCCTTA
9
2
18
11
NC_030117.1
60,989
61,004
ACCTATAT
8
2
16
12
NC_030117.1
62,836
62,951
TACTGGGATCGGGGGGTTGAGGACGCGGATGGTTCACGGCACGCCGGATCGAGCGTGA
58
2
116
13
NC_030117.1
85,766
85,781
CATATGTA
8
2
16
14
NC_030117.1
92,993
93,352
ACTATTAGAATTAACACTCTTACGTCTAGATTGTTTCAACTCTGATGCATCTCCCAACTTCTCTGTAGAATA
72
5
360
15
NC_030117.1
97,619
97,754
ATAGTCCAACCCCCTTAGGCCCCGCCCACTCAAT
34
4
136
16
NC_030117.1
101,157
101,174
CGATGAAGA
9
2
18
17
NC_030117.1
102,509
102,664
CATGTTGATCCTCCCTCTTTGTGTATCCCATTTGCGTGTGTAATTAGGCCGC
52
3
156
18
NC_030117.1
102,685
103,055
ATATTTAAATTGGCTGCCATGTAAACCCTCCCTCTATTACGTGTGTAATTTAC
53
7
371
19
NC_030117.1
103,056
103,295
ATATTTAATTGAATCACCCTCTATTACGTGTGTAATTTAC
40
6
240
20
NC_030117.1
103,474
103,489
TTATTTAA
8
2
16
21
NC_030117.1
105,507
105,753
AAATCTATGAATG
13
19
247
22
NC_030117.1
109,858
109,875
TGAAGAATA
9
2
18
23
NC_030117.1
116,950
117,196
TCATAGATTTCAT
13
19
247
24
NC_030117.1
119,224
119,239
TTAAATAA
8
2
16
25
NC_030117.1
119,395
119,674
TAGAGGGTGATTCAATTAAATATGTAAATTACACACGTAA
40
7
280
26
NC_030117.1
119,675
119,992
TAGAGGGAGGGTTTACATGGCAGCCAATTTAAATATGTAAATTACACACGTAA
53
6
318
27
NC_030117.1
120,037
120,192
AGGATCAACATGGCGGCCTAATTACACACGCAAATGGGATACACAAAGAGGG
52
3
156
28
NC_030117.1
121,539
121,556
TCTTCATCG
9
2
18
29
NC_030117.1
124,947
125,082
GGGTTGGACTATATTGAGTGGGCGGGGCCTAAGG
34
4
136
30
NC_030148.1
11,893
11,908
CGCTTCCT
8
2
16
0
NC_030200.1
16,388
16,405
ATGTAAATA
9
2
18
0
NC_030200.1
21,626
21,641
TATAAAAA
8
2
16
1
NC_030200.1
35,574
35,591
TGGAAATAT
9
2
18
2
NC_030200.1
59,588
59,605
TTCAGAATC
9
2
18
3
NC_030200.1
65,500
65,515
AATTTTTT
8
2
16
4
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Size of downloaded dataset files:
1.37 MB
Size of the auto-converted Parquet files:
1.37 MB
Number of rows:
58,592