Datasets:

ptsw
/

ref_seq_viral_tandemrepeats

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Split (1)

train · 58.6k rows

id stringlengths 11 11	start_pos int64 1 2.47M	end_pos int64 16 2.47M	motif_seq stringlengths 8 100	motif_length int64 8 100	repeats int64 2 96	ltr_length int64 16 2.42k	__index_level_0__ int64 0 1.24k
NC_027785.1	21	38	TCTGCTACA	9	2	18	0
NC_027784.1	993	1,010	CGTTACGTA	9	2	18	0
NC_027779.1	6,541	6,738	TCCTGAAGCTGAAAATAAGGACCCTTATAAACAATACAGCTTTTGGCCTGTTGATTTAACTGAACGGTTTTCAGCTGAATTAAGTCAATTTCCCCTGGG	99	2	198	0
NC_027792.1	17	32	CGAGACAG	8	2	16	0
NC_027916.2	6,540	6,836	TCGGGTCTTTCGGTTCTTGTCACTCGT	27	11	297	0
NC_027916.2	27,611	28,210	CCTCCGATCACCCCACCAGAAGAGGTTACC	30	20	600	1
NC_027916.2	31,883	32,023	TTATAGTAACATACTACATGTAAAGGGATCTAGTTTAAGGATCCGTT	47	3	141	2
NC_027916.2	59,762	59,950	CCACCTCCTCCTCAAGTTGTCCACCCA	27	7	189	3
NC_027916.2	74,398	74,413	AAGCAACC	8	2	16	4
NC_027916.2	85,376	85,391	ACATGTTT	8	2	16	5
NC_027916.2	97,095	97,289	TATTTATATATTA	13	15	195	6
NC_027916.2	121,235	121,564	GGGGCCCGATCCAGG	15	22	330	7
NC_027916.2	123,152	123,286	CAGACTCCGTCCGTTAGATTTTGTCAAATTCTGGTCGAGTCGAAC	45	3	135	8
NC_027916.2	123,583	123,663	ACGTAACCCTAGCTGCTCTAAGGGACA	27	3	81	9
NC_027916.2	126,971	127,770	TGTCGGCCACCCTGACTCTACCCCGCTCCGGCCTGCCCCC	40	20	800	10
NC_027916.2	129,269	129,382	GCTGGTAACAGAGTTCTTAATGGGTGCGCTACCGGCCGCGGCCGCTGGGGCAGACTT	57	2	114	11
NC_027916.2	130,962	131,326	ATGCATATCATTAAATATGGAGGAGGTTATGGAATGAGGGAAGTCGGCTCCGATTGGTAGTTGGGGCAGGTAG	73	5	365	12
NC_027916.2	131,439	131,567	ATGGTGGATATGGGTGGATGTATGTTTATGCATATCATTAAAA	43	3	129	13
NC_027916.2	137,689	137,704	TAATTACC	8	2	16	14
NC_027916.2	150,542	150,706	GGTTGGGGAGAACGGTCATAATTAGAGGGACCG	33	5	165	15
NC_027916.2	151,008	151,295	TATCCGAGTTACTACCCCCCTGTACCTGCTGGAAAT	36	8	288	16
NC_027916.2	151,910	152,274	TTCCATAACCTCCTCCATATTTAATGATATGCATCTACCTGCCCCAACTACCAATCGGAGCCGACTTCCCTCA	73	5	365	17
NC_027916.2	153,885	153,998	AGCAAGTCTGCCCCAGCGGCCGCGGCCGGTAGCGCACCCATTAAGAACTCTGTTACC	57	2	114	18
NC_027916.2	155,475	156,274	CGGGGTAGAGTCAGGGTGGCCGACAGGGGGCAGGCCGGAG	40	20	800	19
NC_027916.2	159,594	159,674	GCTAGGGTTACGTTGTCCCTTAGAGCA	27	3	81	20
NC_027916.2	159,955	160,089	ATTTGACAAAATCTAACGGACGGAGTCTGGTTCGACTCGACCAGA	45	3	135	21
NC_027915.1	667	684	TTAGTAGTA	9	2	18	0
NC_027818.1	7,236	7,253	ATGGCAAGA	9	2	18	0
NC_029255.1	26,271	26,288	ATTGCTAAA	9	2	18	0
NC_029255.1	33,330	33,349	CTATATATAT	10	2	20	1
NC_029255.1	33,723	33,772	AATTTCTACAAAAAGCTAAATCCAG	25	2	50	2
NC_029255.1	34,440	34,519	GTTTTTAACCTATTTTTTGAGTTTTTATTTTCTGATGTGA	40	2	80	3
NC_029255.1	37,388	37,413	ATAAAATAAAAAA	13	2	26	4
NC_029255.1	41,758	41,773	TTGGAGCA	8	2	16	5
NC_029255.1	65,146	65,163	GAAGAATTT	9	2	18	6
NC_029255.1	67,146	67,163	GAAGAAAAA	9	2	18	7
NC_029255.1	74,360	74,377	AGAGTCTGA	9	2	18	8
NC_029255.1	74,420	74,437	ATCTTCTTC	9	2	18	9
NC_029255.1	76,669	76,722	TCTGCTTCTTCATCAGAGATATCTAGA	27	2	54	10
NC_029255.1	76,749	76,802	TTCTTCATCAGAAATTTCTAGTTCTAT	27	2	54	11
NC_029255.1	82,804	82,857	AGCAGCCCCGGCAGCCTGATCAGCCCC	27	2	54	12
NC_029255.1	82,869	82,886	CAGCCCCGG	9	2	18	13
NC_029255.1	82,931	82,966	GCAGCCTGAGCAGCCCCG	18	2	36	14
NC_029255.1	83,834	83,857	TACCCCAGCAGC	12	2	24	15
NC_029255.1	83,884	83,919	CCCCAGCAGATA	12	3	36	16
NC_029255.1	88,321	88,338	TAAAAACTT	9	2	18	17
NC_029255.1	88,930	88,947	TGTCCTCAT	9	2	18	18
NC_029255.1	92,620	92,691	AGAAATAATCCTAGAGATGAACCA	24	3	72	19
NC_029255.1	107,515	107,530	AAACACAC	8	2	16	20
NC_029255.1	112,355	112,414	CATCACCCCCAA	12	5	60	21
NC_029255.1	120,609	120,688	GAAATTTTACAACCCAGCTAAAATCCCACCCTGGATCCTG	40	2	80	22
NC_029255.1	122,854	122,877	GATGGCCTTGGA	12	2	24	23
NC_029255.1	122,998	123,033	TCTCCATCTCCATCCCCA	18	2	36	24
NC_029255.1	123,055	123,102	CCATCTCCATCTCCATCCCCATCC	24	2	48	25
NC_029255.1	123,190	123,225	TCAGGCTCAGGCTCAGGT	18	2	36	26
NC_029255.1	123,226	123,297	TCAGGCTCAGGCTCAGGCTCAGGTTCAGGCTCAGGT	36	2	72	27
NC_029255.1	123,298	123,321	TCAGGCTCAGGT	12	2	24	28
NC_027923.1	1,716	1,733	GGTGGCGGC	9	2	18	0
NC_027923.1	6,523	6,556	GCGGCTTATCGTGTCCG	17	2	34	1
NC_027923.1	8,331	8,380	GGTTATGGTATTATAATGTATTAAT	25	2	50	2
NC_027923.1	8,572	8,679	AGTAAAAAACTTAACTCAGTAAAACTT	27	4	108	3
NC_027923.1	8,739	8,762	AAAAAACTTAGT	12	2	24	4
NC_027923.1	8,769	8,790	CTTAGTAAAAA	11	2	22	5
NC_027923.1	8,791	8,818	CTTAAAGTAAAAAA	14	2	28	6
NC_027923.1	8,835	8,866	TTAGTAAAAACTTAGT	16	2	32	7
NC_027923.1	8,867	8,902	AAAAACTTAGTA	12	3	36	8
NC_027923.1	8,903	8,938	AAAACTTAGTAA	12	3	36	9
NC_027923.1	8,959	8,994	TAAAAAACTTAG	12	3	36	10
NC_027923.1	13,688	13,703	CAATAGTA	8	2	16	11
NC_027923.1	19,641	19,668	GTAATAATTTTATT	14	2	28	12
NC_027923.1	25,759	25,794	CAACAACGA	9	4	36	13
NC_027923.1	43,784	43,801	TTGTTTTCG	9	2	18	14
NC_027923.1	47,739	47,756	AGTTGTTTG	9	2	18	15
NC_027923.1	56,498	56,513	AAATGTAT	8	2	16	16
NC_027923.1	60,522	60,539	CGTCGTCGA	9	2	18	17
NC_027923.1	84,961	85,002	CCGCCGGCAACGACTCCAATT	21	2	42	18
NC_027923.1	103,790	103,809	CGACACGTTT	10	2	20	19
NC_027923.1	103,994	104,013	CGACACGTTT	10	2	20	20
NC_027923.1	125,034	125,049	ATTTTTCT	8	2	16	21
NC_027917.1	5,862	5,877	TATAATGA	8	2	16	0
NC_027917.1	9,680	9,813	TGCAGATTTCCTTTCGGTAGCATTGTTAGACACGCAAGGAATTGTTACTGGGAAATACCGATGTGAT	67	2	134	1
NC_027926.1	3,234	3,255	ATCATATGAAT	11	2	22	0
NC_027922.1	2,959	2,976	ATAACATGT	9	2	18	0
NC_027929.1	494	511	AGGATATTC	9	2	18	0
NC_028099.1	79	94	TTAAGTCC	8	2	16	0
NC_028099.1	1,505	3,124	CACAGTGGGAGGGACTTCCGGCACATCGTCAGACCCGAGCGCCTCGGGTTGGACTTTGGACAAGTCCAACCACGCAAAGTCCAACCCCCG	90	18	1,620	1
NC_028099.1	3,655	3,834	CACAGTGGGAGGGACTTCCGGCACATCGTCAGACCCGAGCGCCTCGGGTTGGACTTTGGACAAGTCCAACCACGCAAAGTCCAACCCCCG	90	2	180	2
NC_028099.1	13,137	13,154	GTAACATAT	9	2	18	3
NC_028099.1	30,882	30,897	AAGGGGGT	8	2	16	4
NC_028099.1	31,466	31,705	TGAGGTTAAACCTCAGCTAAAAGCTGGAATGTCCTGTCCCTAATTTCAAAGATCCTAGAC	60	4	240	5
NC_028099.1	64,080	64,095	CTTTTTTT	8	2	16	6
NC_028099.1	68,963	68,978	GTTCTGTA	8	2	16	7
NC_028099.1	80,123	80,140	GATGTTTAT	9	2	18	8
NC_028099.1	87,481	87,496	AGAGAACC	8	2	16	9
NC_028099.1	99,011	99,026	TAAAAAAA	8	2	16	10
NC_028099.1	113,079	113,094	AAGGGGGT	8	2	16	11
NC_028099.1	114,023	114,142	GGATGGGCCGGCAGT	15	8	120	12
NC_028099.1	114,339	114,374	TCCTCTTCCTCCTCTTCC	18	2	36	13
NC_028099.1	114,405	114,431	TCTTCTTCA	9	3	27	14
NC_028099.1	114,441	114,602	TGGCCCTCT	9	18	162	15

Subsets and Splits