Datasets:

ptsw
/

ref_seq_viral_tandemrepeats

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Split (1)

train · 58.6k rows

id stringlengths 11 11	start_pos int64 1 2.47M	end_pos int64 16 2.47M	motif_seq stringlengths 8 100	motif_length int64 8 100	repeats int64 2 96	ltr_length int64 16 2.42k	__index_level_0__ int64 0 1.24k
NC_079187.1	4,768	4,929	GAGGGTACTCAGACTTATGTGAACTACTCACGCAGCGCGAAGAGCCAAGTGCTGGCGGCTGATACACCAATCAAGCTCACA	81	2	162	0
NC_079187.1	45,183	45,198	TGAACCGC	8	2	16	1
NC_079176.1	13,131	13,148	CCCAATCAT	9	2	18	0
NC_079176.1	27,965	27,980	TATATCAA	8	2	16	1
NC_079176.1	34,438	34,453	TTGGAATA	8	2	16	2
NC_079174.1	5,643	5,658	TGCATCAA	8	2	16	0
NC_079174.1	23,632	23,649	ATGCTGAAA	9	2	18	1
NC_079174.1	48,658	48,675	ACTGGAACA	9	2	18	2
NC_079183.1	9,331	9,346	AAGATGGC	8	2	16	0
NC_079183.1	12,231	12,246	TTGGAATA	8	2	16	1
NC_079183.1	14,945	14,962	TGCCGAAGC	9	2	18	2
NC_079180.1	464	487	AAACCGAAACTA	12	2	24	0
NC_079180.1	7,938	7,953	AAGATGGC	8	2	16	1
NC_079180.1	10,453	10,468	TTGGAATA	8	2	16	2
NC_079186.1	1,114	1,137	TGTTTCTGGTGC	12	2	24	0
NC_079186.1	16,345	16,362	AAATTCGAG	9	2	18	1
NC_079186.1	23,558	23,573	GTCGTTCA	8	2	16	2
NC_079186.1	52,915	52,930	CCCAACAT	8	2	16	3
NC_079175.1	125	148	AAAAAAAATTAT	12	2	24	0
NC_079175.1	10,598	10,615	GATGATTGG	9	2	18	1
NC_079175.1	16,641	16,658	CACCGTTAA	9	2	18	2
NC_079175.1	39,043	39,060	GCAGCTTCG	9	2	18	3
NC_079175.1	41,612	41,627	TATTCCAA	8	2	16	4
NC_079185.1	3,101	3,118	TAATTATGA	9	2	18	0
NC_079185.1	10,179	10,202	AAGAAGCGGCTA	12	2	24	1
NC_079185.1	10,800	10,817	AACAACTGA	9	2	18	2
NC_079185.1	29,919	29,936	TGCATCTGG	9	2	18	3
NC_079185.1	37,850	37,867	GTGGTGGCC	9	2	18	4
NC_079185.1	51,789	51,810	AAGTAGTAGAA	11	2	22	5
NC_079185.1	53,350	53,367	ACTTCTTTC	9	2	18	6
NC_079184.1	260	281	ATAATTTTTTT	11	2	22	0
NC_079184.1	9,705	9,720	AAGATGGC	8	2	16	1
NC_079184.1	12,461	12,476	TTGGAATA	8	2	16	2
NC_079184.1	14,969	14,986	TGCCGAAGC	9	2	18	3
NC_023861.2	1,215	1,230	AGCCTCCC	8	2	16	0
NC_001798.2	444	473	CCCGCCGCCGGGGTC	15	2	30	0
NC_001798.2	484	531	GCCGCGCCCCGGCGCTCCAGCCGT	24	2	48	1
NC_001798.2	943	1,056	CCCCTCCGACCCCCTGACG	19	6	114	2
NC_001798.2	3,471	3,602	CGGGCGGGGGT	11	12	132	3
NC_001798.2	4,653	4,736	CCGCCGCCTCCTCTTCCTCCT	21	4	84	4
NC_001798.2	7,382	7,397	GGGGCCCC	8	2	16	5
NC_001798.2	7,510	7,527	CCTTTCGCG	9	2	18	6
NC_001798.2	8,032	8,069	CCGCGGCCCGTCTGCTGGC	19	2	38	7
NC_001798.2	9,083	9,229	GGCGGCCGGGCGGGGGCGCGC	21	7	147	8
NC_001798.2	9,278	9,328	GGGGAGGGGAGGACGCG	17	3	51	9
NC_001798.2	18,542	18,565	ATCTCGCGCAGG	12	2	24	10
NC_001798.2	22,457	22,480	GGCGTCCGGGGG	12	2	24	11
NC_001798.2	26,777	26,796	GTGGGGCGGG	10	2	20	12
NC_001798.2	34,914	34,929	TGGTTGGG	8	2	16	13
NC_001798.2	53,255	53,287	GGGGTTGGTTT	11	3	33	14
NC_001798.2	56,064	56,090	GGGGCCGCC	9	3	27	15
NC_001798.2	62,660	62,677	GGGTGGGAT	9	2	18	16
NC_001798.2	65,328	65,351	GACGAGGACGGG	12	2	24	17
NC_001798.2	72,133	72,297	GGCAGGGGCGGCTGG	15	11	165	18
NC_001798.2	72,859	72,876	GCGACCGGG	9	2	18	19
NC_001798.2	80,096	80,113	GCGCGGGGA	9	2	18	20
NC_001798.2	81,633	81,648	CCCCCAGG	8	2	16	21
NC_001798.2	87,831	87,846	CCCCGGCG	8	2	16	22
NC_001798.2	106,081	106,188	CCTCCCGCCCCTCCCGCC	18	6	108	23
NC_001798.2	118,092	118,238	GCGCGCCCCCGCCCGGCCGCC	21	7	147	24
NC_001798.2	119,244	119,281	GGCCGCGGGCCAGCAGACG	19	2	38	25
NC_001798.2	119,794	119,811	CGCGAAAGG	9	2	18	26
NC_001798.2	119,924	119,939	GGGGCCCC	8	2	16	27
NC_001798.2	122,557	122,592	GAGGCGGCGGAGGAGGAA	18	2	36	28
NC_001798.2	122,593	122,655	GAGGAGGCGGCGGAGGAGGAA	21	3	63	29
NC_001798.2	123,714	123,845	GCCCGACCCCC	11	12	132	30
NC_001798.2	126,251	126,364	GGGGGTCGGAGGGGCGTCA	19	6	114	31
NC_001798.2	126,775	126,822	GCGCCGGGGCGCGGCACGGCTGGA	24	2	48	32
NC_001798.2	126,844	126,873	CGGGGACCCCGGCGG	15	2	30	33
NC_001798.2	127,526	127,555	CCCGCGGCCGCCTCC	15	2	30	34
NC_001798.2	127,750	127,974	CCCGACCCCCGCCCG	15	15	225	35
NC_001798.2	129,578	129,595	CGCGGCGGC	9	2	18	36
NC_001798.2	129,919	129,936	CACGGCGGC	9	2	18	37
NC_001798.2	131,353	131,376	GGAGGAGGAGGC	12	2	24	38
NC_001798.2	133,306	133,409	CGGGCCGGGGGGA	13	8	104	39
NC_001798.2	133,411	133,442	GGGCCGGGGGGCCGGG	16	2	32	40
NC_001798.2	133,447	133,472	CGGGGGGACGGGC	13	2	26	41
NC_001798.2	133,481	133,600	CGGGGGGA	8	15	120	42
NC_001798.2	133,601	133,642	CGGGCCGGGGGGACGGGGGGA	21	2	42	43
NC_001798.2	142,690	142,705	CCCCGCCG	8	2	16	44
NC_001798.2	147,300	147,317	CGTGGGGGT	9	2	18	45
NC_001798.2	148,096	148,137	CCCGTCCCCCCGTCCCCCCGG	21	2	42	46
NC_001798.2	148,138	148,249	CCCGTCCCCCCGTCCC	16	7	112	47
NC_001798.2	148,255	148,270	CCCCCCGG	8	2	16	48
NC_001798.2	148,287	148,302	GTCCCCCC	8	2	16	49
NC_001798.2	148,303	148,326	GGCCCCCC	8	3	24	50
NC_001798.2	148,327	148,430	GGCCCGTCCCCCC	13	8	104	51
NC_001798.2	150,360	150,383	TCCTCCGCCTCC	12	2	24	52
NC_001798.2	151,805	151,822	GGCCGCCGT	9	2	18	53
NC_001798.2	152,147	152,164	GCCGCCGCG	9	2	18	54
NC_001798.2	153,757	153,981	CGGGGGTCGGGCGGG	15	15	225	55
NC_001798.2	154,181	154,210	CGCGGGGGAGGCGGC	15	2	30	56

Subsets and Splits