Datasets:
| PLINK v1.9.0-b.8 64-bit (22 Oct 2024) | |
| Options in effect: | |
| --double-id | |
| --geno 0.05 | |
| --hwe 1e-4 | |
| --make-bed | |
| --mind 0.05 | |
| --out guolv | |
| --vcf ../maize_598.vcf.gz | |
| Hostname: user-H3C-UniServer-R5300-G6 | |
| Working directory: /home/wlg/MyFiles/Projects/EasyGS/Q026/answer | |
| Start time: Sat May 23 10:49:50 2026 | |
| Random number seed: 1779504590 | |
| 2063880 MB RAM detected; reserving 1031940 MB for main workspace. | |
| --vcf: guolv-temporary.bed + guolv-temporary.bim + guolv-temporary.fam written. | |
| 2668862 variants loaded from .bim file. | |
| 598 people (0 males, 0 females, 598 ambiguous) loaded from .fam. | |
| Ambiguous sex IDs written to guolv.nosex . | |
| 0 people removed due to missing genotype data (--mind). | |
| Using 1 thread (no multithreaded calculations invoked). | |
| Before main variant filters, 598 founders and 0 nonfounders present. | |
| Calculating allele frequencies... done. | |
| Total genotyping rate is exactly 1. | |
| 0 variants removed due to missing genotype data (--geno). | |
| --hwe: 499758 variants removed due to Hardy-Weinberg exact test. | |
| 2169104 variants and 598 people pass filters and QC. | |
| Note: No phenotypes present. | |
| --make-bed to guolv.bed + guolv.bim + guolv.fam ... done. | |
| End time: Sat May 23 10:50:14 2026 | |