GSBench / reference_answer /Q003 /answer /maize_598.log
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PLINK v1.9.0-b.8 64-bit (22 Oct 2024)
Options in effect:
--double-id
--make-bed
--out maize_598
--vcf ../maize_598.vcf.gz
Hostname: user-H3C-UniServer-R5300-G6
Working directory: /home/wlg/MyFiles/Projects/EasyGS/Q003/answer
Start time: Wed May 20 19:34:38 2026
Random number seed: 1779276878
2063880 MB RAM detected; reserving 1031940 MB for main workspace.
--vcf: maize_598-temporary.bed + maize_598-temporary.bim +
maize_598-temporary.fam written.
2668862 variants loaded from .bim file.
598 people (0 males, 0 females, 598 ambiguous) loaded from .fam.
Ambiguous sex IDs written to maize_598.nosex .
Using 1 thread (no multithreaded calculations invoked).
Before main variant filters, 598 founders and 0 nonfounders present.
Calculating allele frequencies... done.
Total genotyping rate is exactly 1.
2668862 variants and 598 people pass filters and QC.
Note: No phenotypes present.
--make-bed to maize_598.bed + maize_598.bim + maize_598.fam ... done.
End time: Wed May 20 19:35:02 2026