PLINK v1.9.0-b.8 64-bit (22 Oct 2024) Options in effect: --double-id --make-bed --out maize_598 --vcf ../maize_598.vcf.gz Hostname: user-H3C-UniServer-R5300-G6 Working directory: /home/wlg/MyFiles/Projects/EasyGS/Q003/answer Start time: Wed May 20 19:34:38 2026 Random number seed: 1779276878 2063880 MB RAM detected; reserving 1031940 MB for main workspace. --vcf: maize_598-temporary.bed + maize_598-temporary.bim + maize_598-temporary.fam written. 2668862 variants loaded from .bim file. 598 people (0 males, 0 females, 598 ambiguous) loaded from .fam. Ambiguous sex IDs written to maize_598.nosex . Using 1 thread (no multithreaded calculations invoked). Before main variant filters, 598 founders and 0 nonfounders present. Calculating allele frequencies... done. Total genotyping rate is exactly 1. 2668862 variants and 598 people pass filters and QC. Note: No phenotypes present. --make-bed to maize_598.bed + maize_598.bim + maize_598.fam ... done. End time: Wed May 20 19:35:02 2026