popV/tabula_muris_All_10x

Popular Vote (popV) model for automated cell type annotation of single-cell RNA-seq data. We provide here pretrained models for plug-in use in your own analysis. Follow our tutorial to learn how to use the model for cell type annotation.

Model description

Ageing is characterized by a progressive loss of physiological integrity, leading to impaired function and increased vulnerability to death. Despite rapid advances over recent years, many of the molecular and cellular processes that underlie the progressive loss of healthy physiology are poorly understood. To gain a better insight into these processes, here we generate a single-cell transcriptomic atlas across the lifespan of Mus musculus that includes data from 23 tissues and organs. We found cell-specific changes occurring across multiple cell types and organs, as well as age-related changes in the cellular composition of different organs. Using single-cell transcriptomic data, we assessed cell-type-specific manifestations of different hallmarks of ageing—such as senescence, genomic instability and changes in the immune system. This transcriptomic atlas—which we denote Tabula Muris Senis, or ‘Mouse Ageing Cell Atlas’—provides molecular information about how the most important hallmarks of ageing are reflected in a broad range of tissues and cell types.

Link to CELLxGENE: Link to the data in the CELLxGENE browser for interactive exploration of the data and download of the source data.

Training Code URL: Not provided by uploader.

Metrics

We provide here accuracies for each of the experts and the ensemble model. The validation set accuracies are computed on a 10% random subset of the data that was not used for training.

Cell Type	N cells	celltypist	knn bbknn	knn harmony	knn on scvi	onclass	scanvi	svm	xgboost	Consensus Prediction
B cell	3058	0.94	0.92	0.89	0.92	0.00	0.89	0.86	0.88	0.94
mesenchymal stem cell	1519	0.91	0.82	0.94	0.87	0.00	0.75	0.94	0.90	0.96
granulocyte	1251	0.89	0.89	0.83	0.83	0.00	0.88	0.80	0.86	0.91
basal cell of epidermis	1143	0.89	0.91	0.89	0.93	0.00	0.81	0.90	0.84	0.95
T cell	1143	0.85	0.81	0.77	0.73	0.00	0.76	0.72	0.78	0.86
keratinocyte	1118	0.90	0.85	0.91	0.91	0.00	0.81	0.91	0.87	0.96
endothelial cell	1041	0.89	0.89	0.84	0.88	0.00	0.83	0.96	0.90	0.95
classical monocyte	799	0.83	0.54	0.77	0.70	0.00	0.64	0.85	0.86	0.93
granulocytopoietic cell	771	0.78	0.80	0.81	0.80	0.00	0.82	0.77	0.81	0.86
macrophage	728	0.69	0.64	0.68	0.69	0.00	0.55	0.69	0.73	0.81
bladder urothelial cell	546	0.99	1.00	0.93	0.95	0.00	0.96	1.00	0.99	1.00
proerythroblast	450	0.64	0.69	0.64	0.55	0.00	0.71	0.61	0.68	0.76
kidney proximal convoluted tubule epithelial cell	431	0.84	0.86	0.80	0.84	0.00	0.84	0.89	0.87	0.87
endothelial cell of coronary artery	329	0.77	0.84	0.70	0.80	0.00	0.69	0.96	0.88	0.93
epithelial cell of proximal tubule	307	0.78	0.84	0.70	0.75	0.00	0.81	0.89	0.84	0.84
bladder cell	299	0.98	0.97	0.89	0.80	0.00	0.68	0.99	0.97	0.99
mature NK T cell	276	0.65	0.70	0.54	0.40	0.00	0.61	0.59	0.71	0.74
hepatocyte	300	1.00	1.00	1.00	0.98	0.00	0.99	1.00	0.99	1.00
erythroblast	272	0.67	0.69	0.71	0.67	0.00	0.74	0.70	0.74	0.77
promonocyte	285	0.81	0.78	0.83	0.78	0.00	0.78	0.88	0.89	0.92
stromal cell	272	0.70	0.28	0.89	0.65	0.00	0.63	0.94	0.77	0.89
megakaryocyte-erythroid progenitor cell	268	0.63	0.67	0.53	0.70	0.00	0.67	0.68	0.65	0.72
type B pancreatic cell	269	0.91	0.88	0.76	0.98	0.00	0.97	0.99	0.99	0.99
Kupffer cell	263	0.97	0.51	0.76	0.77	0.00	0.84	0.98	0.96	0.97
natural killer cell	267	0.89	0.88	0.78	0.81	0.00	0.82	0.88	0.88	0.91
professional antigen presenting cell	274	0.00	0.01	0.15	0.07	0.00	0.01	0.54	0.49	0.06
fibroblast of cardiac tissue	246	0.97	0.97	0.90	0.68	0.00	0.66	0.98	0.95	0.98
monocyte	246	0.77	0.50	0.78	0.38	0.00	0.59	0.92	0.85	0.90
bronchial smooth muscle cell	221	0.96	0.96	0.86	0.93	0.00	0.97	0.97	0.95	0.97
hematopoietic precursor cell	210	0.59	0.70	0.50	0.53	0.00	0.66	0.71	0.79	0.78
pancreatic acinar cell	228	0.99	0.97	0.55	0.99	0.00	0.99	1.00	1.00	1.00
skeletal muscle satellite cell	183	0.99	0.99	0.95	0.97	0.00	0.96	0.99	0.98	0.99
DN4 thymocyte	195	0.23	0.04	0.45	0.23	0.00	0.00	0.59	0.61	0.33
luminal epithelial cell of mammary gland	180	0.93	0.91	0.93	0.91	0.00	0.91	0.99	0.95	0.96
mesenchymal stem cell of adipose tissue	188	0.64	0.49	0.68	0.58	0.00	0.15	0.93	0.74	0.89
thymocyte	175	0.97	0.50	0.89	0.95	0.00	0.94	0.98	0.93	0.98
myeloid cell	234	0.56	0.07	0.51	0.47	0.00	0.03	0.86	0.80	0.71
fibroblast	179	0.61	0.11	0.67	0.64	0.00	0.56	0.69	0.70	0.79
immature T cell	172	0.90	0.74	0.86	0.94	0.00	0.96	0.94	0.88	0.95
intermediate monocyte	176	0.66	0.27	0.62	0.61	0.00	0.65	0.60	0.64	0.77
epidermal cell	175	0.94	0.00	0.88	0.93	0.00	0.89	0.93	0.89	0.96
chondrocyte	160	0.87	0.00	0.86	0.84	0.00	0.88	0.88	0.89	0.89
plasma cell	153	0.65	0.66	0.66	0.69	0.00	0.54	0.57	0.66	0.76
smooth muscle cell	171	0.74	0.81	0.79	0.81	0.00	0.80	0.87	0.82	0.83
lymphocyte	147	0.24	0.24	0.30	0.20	0.00	0.03	0.30	0.44	0.38
basal cell	156	0.98	0.98	0.96	0.95	0.00	0.96	0.99	0.97	0.99
naive T cell	151	0.80	0.90	0.89	0.90	0.00	0.89	0.89	0.88	0.90
kidney loop of Henle thick ascending limb epithelial cell	152	0.92	0.92	0.89	0.92	0.00	0.83	0.90	0.90	0.93
fibroblast of lung	146	0.95	0.92	0.96	0.94	0.00	0.96	0.99	0.97	0.97
leukocyte	142	0.66	0.65	0.53	0.42	0.00	0.45	0.78	0.78	0.82
alveolar macrophage	131	0.98	0.98	0.99	0.95	0.00	0.97	0.99	0.98	0.99
lung macrophage	127	0.89	0.05	0.61	0.50	0.00	0.84	0.86	0.88	0.94
enterocyte of epithelium of large intestine	98	0.96	0.69	0.87	0.92	0.00	0.94	0.98	0.94	0.97
non-classical monocyte	93	0.76	0.78	0.76	0.75	0.00	0.72	0.85	0.77	0.80
double negative thymocyte	80	0.74	0.00	0.40	0.65	0.00	0.77	0.84	0.78	0.88
precursor B cell	108	0.78	0.87	0.75	0.81	0.00	0.88	0.95	0.93	0.90
mesenchymal cell	98	0.28	0.00	0.11	0.07	0.00	0.15	0.45	0.55	0.38
CD8-positive, alpha-beta T cell	78	0.53	0.68	0.26	0.20	0.00	0.50	0.65	0.71	0.70
immature B cell	85	0.96	0.91	0.93	0.92	0.00	0.89	0.66	0.86	0.96
kidney collecting duct principal cell	68	0.64	0.99	0.93	0.93	0.00	0.86	0.94	0.95	0.98
kidney distal convoluted tubule epithelial cell	69	0.00	0.97	0.88	0.91	0.00	0.89	0.91	0.88	0.93
endocardial cell	62	0.92	0.96	0.88	0.94	0.00	0.88	0.95	0.82	0.96
endothelial cell of hepatic sinusoid	52	0.97	0.93	0.78	0.83	0.00	0.72	0.98	0.91	0.93
neutrophil	62	0.63	0.62	0.68	0.71	0.00	0.85	0.91	0.79	0.84
CD4-positive, alpha-beta T cell	49	0.00	0.30	0.17	0.19	0.00	0.23	0.39	0.37	0.43
late pro-B cell	59	0.78	0.80	0.45	0.69	0.00	0.85	0.78	0.79	0.88
adventitial cell	47	0.71	0.47	0.79	0.41	0.00	0.37	0.87	0.68	0.85
basal epithelial cell of tracheobronchial tree	48	0.97	0.06	0.91	0.83	0.00	0.68	0.98	0.93	0.99
plasmatocyte	39	0.77	0.78	0.67	0.87	0.00	0.53	0.85	0.81	0.92
keratinocyte stem cell	42	0.84	0.00	0.72	0.89	0.00	0.86	0.91	0.77	0.91
brush cell	35	0.86	0.83	0.67	0.83	0.00	0.86	0.84	0.76	0.88
erythroid progenitor cell, mammalian	37	0.78	0.00	0.48	0.39	0.00	0.23	0.71	0.60	0.89
naive B cell	38	0.95	0.96	0.88	0.92	0.00	0.82	0.87	0.91	0.94
kidney cortex artery cell	37	0.76	0.85	0.33	0.67	0.00	0.54	0.76	0.67	0.84
erythrocyte	30	0.63	0.49	0.71	0.62	0.00	0.38	0.83	0.71	0.81
intestinal crypt stem cell	29	0.57	0.00	0.17	0.77	0.00	0.51	0.89	0.83	0.86
epithelial cell	30	0.65	0.04	0.75	0.66	0.00	0.67	0.92	0.78	0.80
pancreatic ductal cell	28	0.78	0.56	0.80	0.85	0.00	0.83	0.86	0.86	0.84
cardiac muscle cell	32	0.98	0.97	1.00	1.00	0.00	0.93	0.98	0.97	0.98
vein endothelial cell	32	0.54	0.76	0.50	0.71	0.00	0.67	0.87	0.79	0.81
pancreatic A cell	37	0.00	0.00	0.24	0.93	0.00	0.84	0.92	0.93	0.92
myeloid leukocyte	28	0.51	0.07	0.49	0.06	0.00	0.06	0.60	0.81	0.87
Schwann cell	22	0.75	0.23	0.84	0.83	0.00	0.90	0.81	0.75	0.79
pancreatic D cell	21	0.33	0.37	0.36	0.91	0.00	0.86	0.91	0.98	0.93
mesangial cell	28	0.00	0.80	0.51	0.67	0.00	0.70	0.92	0.87	0.91
basophil	28	0.67	0.77	0.85	0.65	0.00	0.55	0.66	0.74	0.85
myeloid dendritic cell	37	0.35	0.68	0.29	0.48	0.00	0.46	0.81	0.73	0.83
epithelial cell of large intestine	25	0.00	0.08	0.28	0.73	0.00	0.75	0.83	0.81	0.88
pulmonary interstitial fibroblast	25	0.88	0.85	0.94	1.00	0.00	0.94	0.94	0.91	0.98
kidney loop of Henle ascending limb epithelial cell	21	0.00	0.27	0.21	0.23	0.00	0.41	0.45	0.54	0.30
cell of skeletal muscle	13	1.00	0.96	0.96	0.96	0.00	0.58	0.96	0.92	1.00
Langerhans cell	13	0.96	0.76	0.00	0.58	0.00	0.39	0.87	0.83	0.92
stem cell of epidermis	9	0.49	0.00	0.80	0.86	0.00	0.13	0.82	0.56	0.86
kidney capillary endothelial cell	19	0.29	0.54	0.32	0.41	0.00	0.28	0.38	0.35	0.34
large intestine goblet cell	18	0.00	0.00	0.62	0.91	0.00	0.89	1.00	0.94	0.97
pancreatic PP cell	14	0.00	0.00	0.00	0.88	0.00	0.76	0.86	0.92	0.93
macrophage dendritic cell progenitor	25	0.00	0.52	0.16	0.38	0.00	0.70	0.69	0.49	0.70
DN3 thymocyte	15	0.93	0.85	0.00	0.93	0.00	0.85	0.86	0.85	0.93
smooth muscle cell of trachea	11	0.00	0.00	0.38	0.38	0.00	0.12	0.62	0.64	0.31
regulatory T cell	11	0.00	0.00	0.00	0.00	0.00	0.23	0.20	0.21	0.00
plasmacytoid dendritic cell	16	0.48	0.40	0.17	0.32	0.00	0.59	0.65	0.32	0.64
smooth muscle cell of the pulmonary artery	6	0.00	0.80	0.67	0.46	0.00	0.45	0.86	0.62	0.80
kidney proximal straight tubule epithelial cell	7	0.00	0.00	0.00	0.00	0.00	0.00	0.24	0.21	0.00
blood cell	11	0.00	0.00	0.00	0.14	0.00	0.00	0.27	0.31	0.00
immature NK T cell	6	0.29	0.22	0.33	0.25	0.00	0.10	0.32	0.57	0.40
cardiac neuron	7	0.00	0.22	0.40	0.24	0.00	0.24	0.48	0.59	0.44
mast cell	4	0.00	0.00	0.16	0.00	0.00	0.17	0.60	0.43	0.31
pericyte	8	1.00	0.94	0.93	0.94	0.00	0.94	0.70	1.00	1.00
ciliated columnar cell of tracheobronchial tree	3	0.00	0.04	0.75	0.86	0.00	0.55	0.14	1.00	1.00
neuroendocrine cell	7	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.17	0.00
dendritic cell	8	0.00	0.00	0.36	0.00	0.00	0.19	0.67	0.47	0.55
endothelial cell of lymphatic vessel	3	0.00	0.50	0.80	0.00	0.00	0.14	0.67	0.36	0.80
hepatic stellate cell	3	0.00	0.00	0.80	0.67	0.00	0.22	1.00	0.80	0.80
hematopoietic stem cell	5	0.00	0.00	0.00	0.33	0.00	0.38	0.55	0.67	0.57
kidney collecting duct epithelial cell	2	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
pancreatic stellate cell	1	0.00	0.00	0.00	0.00	0.00	0.04	1.00	0.00	0.00
club cell	1	0.15	0.00	0.00	0.00	0.00	0.07	0.00	0.15	0.17
lung neuroendocrine cell	1	0.00	0.00	1.00	1.00	0.00	0.00	0.15	1.00	1.00
kidney cell	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
duct epithelial cell	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00

The train accuracies are computed on the training data.

Cell Type	N cells	celltypist	knn bbknn	knn harmony	knn on scvi	onclass	scanvi	svm	xgboost	Consensus Prediction
B cell	27660	0.94	0.91	0.94	0.95	0.00	0.95	0.88	0.89	0.96
mesenchymal stem cell	13194	0.90	0.80	0.97	0.91	0.00	0.85	0.94	0.91	0.96
granulocyte	11345	0.88	0.88	0.94	0.93	0.00	0.91	0.81	0.86	0.92
basal cell of epidermis	10288	0.89	0.88	0.94	0.95	0.00	0.87	0.89	0.85	0.95
T cell	10273	0.83	0.77	0.82	0.87	0.00	0.89	0.75	0.78	0.92
keratinocyte	10024	0.89	0.83	0.95	0.95	0.00	0.87	0.91	0.88	0.96
endothelial cell	8853	0.89	0.86	0.89	0.93	0.00	0.92	0.96	0.91	0.97
classical monocyte	7123	0.85	0.48	0.86	0.90	0.00	0.90	0.86	0.86	0.94
granulocytopoietic cell	6828	0.80	0.75	0.93	0.91	0.00	0.85	0.80	0.83	0.90
macrophage	6456	0.69	0.62	0.84	0.82	0.00	0.84	0.72	0.75	0.87
bladder urothelial cell	4685	0.99	0.99	1.00	0.98	0.00	0.99	1.00	0.99	1.00
proerythroblast	4120	0.66	0.68	0.85	0.82	0.00	0.83	0.66	0.73	0.82
kidney proximal convoluted tubule epithelial cell	4029	0.86	0.82	0.89	0.89	0.00	0.89	0.92	0.91	0.92
endothelial cell of coronary artery	2960	0.77	0.81	0.81	0.89	0.00	0.98	0.97	0.91	0.98
epithelial cell of proximal tubule	2746	0.80	0.71	0.84	0.83	0.00	0.85	0.89	0.87	0.89
bladder cell	2704	0.97	0.97	1.00	0.88	0.00	0.91	0.99	0.97	0.99
mature NK T cell	2686	0.67	0.69	0.68	0.82	0.00	0.80	0.70	0.76	0.85
hepatocyte	2626	0.99	1.00	0.99	0.99	0.00	0.99	1.00	0.99	1.00
erythroblast	2646	0.70	0.72	0.84	0.87	0.00	0.91	0.76	0.81	0.87
promonocyte	2542	0.81	0.78	0.88	0.91	0.00	0.91	0.91	0.90	0.93
stromal cell	2511	0.71	0.01	0.98	0.77	0.00	0.83	0.94	0.81	0.93
megakaryocyte-erythroid progenitor cell	2444	0.70	0.73	0.83	0.84	0.00	0.87	0.76	0.77	0.86
type B pancreatic cell	2405	0.92	0.64	0.92	0.99	0.00	0.98	1.00	1.00	1.00
Kupffer cell	2283	0.97	0.39	0.84	0.91	0.00	0.98	0.99	0.98	0.99
natural killer cell	2217	0.85	0.84	0.76	0.87	0.00	0.89	0.89	0.90	0.92
professional antigen presenting cell	2208	0.00	0.00	0.31	0.35	0.00	0.97	0.56	0.50	0.46
fibroblast of cardiac tissue	2162	0.98	0.97	0.97	0.80	0.00	0.93	0.99	0.96	1.00
monocyte	2147	0.77	0.45	0.87	0.85	0.00	0.92	0.92	0.88	0.93
bronchial smooth muscle cell	2118	0.97	0.97	0.85	0.96	0.00	0.98	0.98	0.97	0.99
hematopoietic precursor cell	1934	0.57	0.68	0.67	0.83	0.00	0.91	0.74	0.84	0.90
pancreatic acinar cell	1912	0.98	0.97	0.91	1.00	0.00	0.99	1.00	0.99	1.00
skeletal muscle satellite cell	1872	0.98	0.98	0.99	0.98	0.00	0.99	0.98	0.97	0.99
DN4 thymocyte	1805	0.28	0.01	0.58	0.67	0.00	0.95	0.66	0.65	0.79
luminal epithelial cell of mammary gland	1723	0.93	0.88	0.97	0.96	0.00	0.97	0.98	0.97	0.98
mesenchymal stem cell of adipose tissue	1705	0.57	0.16	0.87	0.69	0.00	0.97	0.93	0.79	0.94
thymocyte	1717	0.98	0.13	0.93	0.98	0.00	0.98	0.99	0.97	0.99
myeloid cell	1637	0.57	0.01	0.73	0.70	0.00	0.96	0.89	0.83	0.92
fibroblast	1634	0.63	0.05	0.79	0.77	0.00	0.73	0.79	0.81	0.87
immature T cell	1612	0.91	0.37	0.94	0.97	0.00	0.97	0.97	0.94	0.97
intermediate monocyte	1573	0.64	0.23	0.69	0.78	0.00	0.71	0.65	0.65	0.81
epidermal cell	1560	0.93	0.00	0.94	0.94	0.00	0.93	0.90	0.89	0.96
chondrocyte	1470	0.84	0.00	0.89	0.88	0.00	0.89	0.92	0.92	0.93
plasma cell	1468	0.63	0.65	0.80	0.82	0.00	0.71	0.69	0.74	0.84
smooth muscle cell	1430	0.74	0.81	0.88	0.93	0.00	0.88	0.90	0.85	0.85
lymphocyte	1444	0.24	0.20	0.67	0.52	0.00	0.81	0.40	0.52	0.73
basal cell	1431	0.98	0.97	0.99	0.98	0.00	0.98	0.99	0.97	0.99
naive T cell	1417	0.78	0.91	0.94	0.94	0.00	0.91	0.91	0.91	0.93
kidney loop of Henle thick ascending limb epithelial cell	1402	0.93	0.93	0.94	0.93	0.00	0.92	0.97	0.96	0.95
fibroblast of lung	1377	0.94	0.91	0.95	0.97	0.00	0.99	0.99	0.98	0.99
leukocyte	1354	0.64	0.53	0.74	0.68	0.00	0.91	0.83	0.81	0.93
alveolar macrophage	1235	0.98	0.96	0.98	0.97	0.00	0.97	0.98	0.97	0.99
lung macrophage	1030	0.89	0.03	0.79	0.87	0.00	0.95	0.90	0.89	0.96
enterocyte of epithelium of large intestine	1027	0.95	0.00	0.94	0.96	0.00	0.97	1.00	0.99	1.00
non-classical monocyte	917	0.77	0.78	0.90	0.91	0.00	0.90	0.90	0.86	0.89
double negative thymocyte	891	0.72	0.00	0.65	0.86	0.00	0.88	0.91	0.86	0.93
precursor B cell	807	0.78	0.85	0.86	0.95	0.00	0.94	0.96	0.95	0.95
mesenchymal cell	781	0.26	0.00	0.44	0.31	0.00	0.40	0.55	0.62	0.62
CD8-positive, alpha-beta T cell	792	0.49	0.55	0.43	0.69	0.00	0.84	0.80	0.81	0.91
immature B cell	741	0.94	0.89	0.94	0.93	0.00	0.90	0.69	0.87	0.94
kidney collecting duct principal cell	721	0.65	0.94	0.96	0.96	0.00	0.91	0.99	0.98	0.98
kidney distal convoluted tubule epithelial cell	675	0.00	0.92	0.93	0.94	0.00	0.94	0.98	0.98	0.96
endocardial cell	615	0.89	0.90	0.92	0.93	0.00	0.95	0.96	0.85	0.98
endothelial cell of hepatic sinusoid	622	0.97	0.95	0.82	0.90	0.00	0.87	0.99	0.98	0.99
neutrophil	490	0.64	0.57	0.95	0.92	0.00	0.94	0.95	0.86	0.95
CD4-positive, alpha-beta T cell	502	0.00	0.28	0.51	0.63	0.00	0.69	0.59	0.58	0.88
late pro-B cell	473	0.77	0.76	0.67	0.87	0.00	0.91	0.91	0.89	0.96
adventitial cell	479	0.78	0.54	0.94	0.67	0.00	0.71	0.90	0.78	0.95
basal epithelial cell of tracheobronchial tree	473	0.95	0.00	0.99	0.90	0.00	0.99	0.98	0.97	0.99
plasmatocyte	457	0.74	0.81	0.92	0.89	0.00	0.66	0.91	0.92	0.97
keratinocyte stem cell	376	0.87	0.00	0.94	0.93	0.00	0.90	0.91	0.76	0.97
brush cell	379	0.91	0.76	0.95	0.92	0.00	0.92	0.92	0.88	0.97
erythroid progenitor cell, mammalian	372	0.79	0.00	0.93	0.81	0.00	0.33	0.80	0.64	0.94
naive B cell	360	0.88	0.90	0.95	0.94	0.00	0.87	0.93	0.96	0.96
kidney cortex artery cell	344	0.80	0.88	0.83	0.77	0.00	0.68	0.81	0.73	0.86
erythrocyte	326	0.74	0.47	0.85	0.92	0.00	0.78	0.88	0.80	0.94
intestinal crypt stem cell	310	0.68	0.00	0.87	0.88	0.00	0.79	1.00	0.99	0.99
epithelial cell	308	0.70	0.02	0.93	0.85	0.00	0.91	0.95	0.91	0.97
pancreatic ductal cell	307	0.82	0.56	0.96	0.95	0.00	0.95	0.97	0.94	0.97
cardiac muscle cell	302	1.00	1.00	1.00	0.99	0.00	0.90	1.00	0.99	1.00
vein endothelial cell	288	0.57	0.79	0.84	0.82	0.00	0.84	0.92	0.88	0.94
pancreatic A cell	272	0.00	0.00	0.71	0.92	0.00	0.95	0.99	0.98	0.99
myeloid leukocyte	278	0.51	0.06	0.89	0.51	0.00	0.94	0.69	0.87	0.96
Schwann cell	252	0.75	0.23	0.95	0.90	0.00	0.95	0.89	0.85	0.91
pancreatic D cell	250	0.39	0.16	0.87	0.95	0.00	0.93	0.99	0.99	0.97
mesangial cell	233	0.00	0.84	0.77	0.85	0.00	0.75	0.94	0.93	0.98
basophil	226	0.59	0.63	0.89	0.86	0.00	0.78	0.78	0.81	0.86
myeloid dendritic cell	208	0.33	0.64	0.84	0.62	0.00	0.64	0.81	0.78	0.93
epithelial cell of large intestine	204	0.00	0.00	0.72	0.81	0.00	0.85	0.99	0.96	0.97
pulmonary interstitial fibroblast	197	0.88	0.86	0.96	0.96	0.00	0.95	0.89	0.97	0.98
kidney loop of Henle ascending limb epithelial cell	180	0.00	0.23	0.41	0.16	0.00	0.63	0.82	0.81	0.54
cell of skeletal muscle	179	0.98	0.94	0.98	0.95	0.00	0.74	0.98	0.97	0.98
Langerhans cell	162	0.92	0.79	0.97	0.86	0.00	0.84	0.96	0.87	1.00
stem cell of epidermis	162	0.68	0.00	0.81	0.84	0.00	0.40	0.91	0.78	0.93
kidney capillary endothelial cell	142	0.23	0.34	0.46	0.35	0.00	0.24	0.30	0.30	0.28
large intestine goblet cell	140	0.00	0.00	0.94	0.97	0.00	0.87	1.00	1.00	1.00
pancreatic PP cell	143	0.00	0.00	0.71	0.90	0.00	0.93	0.99	0.98	0.99
macrophage dendritic cell progenitor	123	0.00	0.20	0.41	0.79	0.00	0.79	0.86	0.84	0.87
DN3 thymocyte	131	0.83	0.49	0.87	0.91	0.00	0.96	0.97	0.91	0.97
smooth muscle cell of trachea	116	0.00	0.00	0.50	0.55	0.00	0.81	0.89	0.88	0.86
regulatory T cell	112	0.00	0.05	0.18	0.38	0.00	0.49	0.56	0.42	0.77
plasmacytoid dendritic cell	100	0.38	0.32	0.45	0.78	0.00	0.77	0.87	0.81	0.92
smooth muscle cell of the pulmonary artery	92	0.00	0.67	0.88	0.70	0.00	0.73	0.96	0.84	0.93
kidney proximal straight tubule epithelial cell	88	0.00	0.00	0.14	0.02	0.00	0.66	0.61	0.48	0.41
blood cell	77	0.00	0.00	0.39	0.34	0.00	0.27	0.44	0.36	0.57
immature NK T cell	78	0.29	0.06	0.66	0.66	0.00	0.31	0.50	0.56	0.77
cardiac neuron	74	0.00	0.27	0.92	0.72	0.00	0.78	0.76	0.91	0.96
mast cell	72	0.00	0.00	0.87	0.76	0.00	0.73	0.86	0.78	0.94
pericyte	53	0.98	0.85	0.92	0.92	0.00	0.97	0.63	0.94	0.99
ciliated columnar cell of tracheobronchial tree	54	0.00	0.05	0.69	0.95	0.00	0.93	0.41	1.00	0.97
neuroendocrine cell	41	0.00	0.00	0.25	0.28	0.00	0.76	0.99	0.76	0.61
dendritic cell	37	0.00	0.00	0.59	0.49	0.00	0.30	0.79	0.69	0.93
endothelial cell of lymphatic vessel	38	0.00	0.30	0.93	0.65	0.00	0.20	0.75	0.52	0.97
hepatic stellate cell	36	0.00	0.05	0.81	0.91	0.00	0.48	0.99	0.99	0.99
hematopoietic stem cell	31	0.00	0.00	0.28	0.73	0.00	0.45	0.78	0.87	0.97
kidney collecting duct epithelial cell	23	0.00	0.00	0.08	0.00	0.00	0.73	1.00	0.92	0.16
pancreatic stellate cell	20	0.00	0.00	0.71	0.26	0.00	0.23	0.89	1.00	0.97
club cell	14	0.07	0.00	0.25	0.11	0.00	0.17	0.21	0.20	0.15
lung neuroendocrine cell	3	0.00	0.00	1.00	0.80	0.00	0.60	0.03	1.00	1.00
kidney cell	3	0.00	0.00	0.00	0.00	0.00	0.60	0.02	0.86	0.80
duct epithelial cell	2	0.00	0.00	0.00	0.00	0.00	0.57	1.00	0.07	0.00

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