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gagneurlab
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SpeciesLM

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Load each model using:

from transformers import AutoTokenizer, AutoModelForMaskedLM

tokenizer = AutoTokenizer.from_pretrained("gagneurlab/SpeciesLM", revision = "<<choose model type>>")
model = AutoModelForMaskedLM.from_pretrained("gagneurlab/SpeciesLM", revision = "<<choose model type>>")

Model type:

  • Species LM, 3' region: downstream_species_lm
  • Agnostic LM, 3' region: downstream_agnostic_lm
  • Species LM, 5' region: upstream_species_lm
  • Agnostic LM, 5' region: upstream_agnostic_lm
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