monsoon-nlp/tinyllama-proteinpretrain-quinoa
Text Generation
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Updated
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102
protein_name
stringlengths 6
11
| species
stringclasses 299
values | sequence
stringlengths 5
4.97k
| annotation
stringlengths 5
2.1k
⌀ |
|---|---|---|---|
1433X_MAIZE | Zea mays | ILNSPDRACNLAKQAFDEAISELDSLGEESYKDSTLIMQLLXDNLTLWTSDTNEDGGDEIK | null |
2ABA_ORYSJ | Oryza sativa subsp. japonica | MMNPDGGDGDRLEAAGAGSSSAQQGHPTMEWRFAQVFGERAAGEDVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDARDNASRREMERQDAPITRHPEFRYKSEFQSHEPEFDYLKSLEIEEKINKIRWCQTANNSLSLLSTNDKTIKYWKVQEKKVKQVSVMNLDSRSVGTGTSSSASTSSSRGLLPNGGCSDKSSFLNSDILFPPGGYPSLRLPVVVASQDVNLVARCRRVYAHAHDYHINSISTNSDGETYISADDLRINLWNLEINNQSFNIVDVKPPNMEDLTEVITCAEFHPTHCNTLAYSSSKGSIRLIDLRQSALCDNHSKIFEEHEAPGSRSFFTEIIASISDIKFSRDGRYILSRDYMTLKLWDLNMDSGPVSTFQVHEHLRPKLCDLYENDSIFDKFECCLSGDGLHVATGSYGNLFRVFGCTPGSTEATTLEASRNPMRRQIVNPTRPTRTLTSLARGVRRGGENQGVDANGNSFDFSTKLLHLAWHPTENSIACAAANSLYMYYARRCLRKFIVFGSLLEAACLHMQPEIWCRMLSSIPPLGPKEAVDAHKMAFVAVTASLLIL | The B regulatory subunit may modulate substrate selectivity and catalytic activity, and may also direct the localization of the catalytic enzyme to a particular subcellular compartment. |
9DC1_SOLPI | Solanum pimpinellifolium | MGCVKLVFFMLYVFLFQLVSSSSLPHLCPEDQALALLQFKNMFTVNPNAFHYCPDITGREIQSYPRTLSWNKSTSCCSWDGVHCDETTGQVIALDLRCSQLQGKFHSNSSLFQLSNLKRLDLSNNNFIGSLISPKFGEFSDLTHLDLSDSSFTGVIPSEISHLSKLHVLLIGDQYGLSIVPHNFEPLLKNLTQLRELNLYEVNLSSTVPSNFSSHLTTLQLSGTGLRGLLPERVFHLSDLEFLDLSYNSQLMVRFPTTKWNSSASLMKLYVHSVNIADRIPESFSHLTSLHELDMGYTNLSGPIPKPLWNLTNIESLDLRYNHLEGPIPQLPIFEKLKKLSLFRNDNLDGGLEFLSFNTQLERLDLSSNSLTGPIPSNISGLQNLECLYLSSNHLNGSIPSWIFSLPSLVELDLSNNTFSGKIQEFKSKTLSAVTLKQNKLKGRIPNSLLNQKNLQLLLLSHNNISGHISSAICNLKTLILLDLGSNNLEGTIPQCVVERNEYLSHLDLSKNRLSGTINTTFSVGNILRVISLHGNKLTGKVPRSMINCKYLTLLDLGNNMLNDTFPNWLGYLFQLKILSLRSNKLHGPIKSSGNTNLFMGLQILDLSSNGFSGNLPERILGNLQTMKEIDESTGFPEYISDPYDIYYNYLTTISTKGQDYDSVRILDSNMIINLSKNRFEGHIPSIIGDLVGLRTLNLSHNVLEGHIPASFQNLSVLESLDLSSNKISGEIPQQLASLTFLEVLNLSHNHLVGCIPKGKQFDSFGNTSYQGNDGLRGFPLSKLCGGEDQVTTPAELDQEEEEEDSPMISWQGVLVGYGCGLVIGLSVIYIMWSTQYPAWFSRMDLKLEHIITTKMKKHKKRY | Involved in plant defense. Confers resistance to the fungal pathogen C.fulvum through recognition of the AVR9 elicitor protein.
Subcellular locations: Cell membrane |
9DC2_SOLPI | Solanum pimpinellifolium | MGCVKLVFFMLYVFLFQLVSSSSLPHLCPEDQALALLQFKNMFTVNPNAFHYCPDITGREIQSYPRTLSWNKSTSCCSWDGVHCDETTGQVIALDLRCSQLQGKFHSNSSLFQLSNLKRLDLSNNNFIGSLISPKFGEFSDLTHLDLSDSSFTGVIPSEISHLSKLHVLLIGDQYGLSIVPHNFEPLLKNLTQLRELNLYEVNLSSTVPSNFSSHLTTLQLSGTGLRGLLPERVFHLSDLEFLDLSYNSQLMVRFPTTKWNSSASLMKLYVHSVNIADRIPESFSHLTSLHELDMGYTNLSGPIPKPLWNLTNIESLDLRYNHLEGPIPQLPIFEKLKKLSLFRNDNLDGGLEFLSFNTQLERLDLSSNSLTGPIPSNISGLQNLECLYLSSNHLNGSIPSWIFSLPSLVELDLSNNTFSGKIQEFKSKTLSAVTLKQNKLKGRIPNSLLNQKNLQLLLLSHNNISGHISSAICNLKTLILLDLGSNNLEGTIPQCVVERNEYLSHLDLSKNRLSGTINTTFSVGNILRVISLHGNKLTGKVPRSMINCKYLTLLDLGNNMLNDTFPNWLGYLFQLKILSLRSNKLHGPIKSSGNTNLFMGLQILDLSSNGFSGNLPERILGNLQTMKEIDESTGFPEYISDPYDIYYNYLTTISTKGQDYDSVRILDSNMIINLSKNRFEGHIPSIIGDLVGLRTLNLSHNVLEGHIPASFQNLSVLESLDLSSNKISGEIPQQLASLTFLEVLNLSHNHLVGCIPKGKQFDSFGNTSYQGNDGLRGFPLSKLCGGEDQVTTPAELDQEEEEEDSPMISWQGVLVGYGCGLVIGLSVIYIMWSTQYPAWFSRMDLKLEHIITTKMKKHKKRY | Involved in plant defense. Confers resistance to the fungal pathogen C.fulvum through recognition of the AVR9 elicitor protein.
Subcellular locations: Cell membrane |
9DC3_SOLPI | Solanum pimpinellifolium | MGCVKLVFFMLYVFLFQLVSSSSLPHLCPEDQALALLQFKNMFTVNPNAFHYCPDITGREIQSYPRTLSWNKSTSCCSWDGVHCDETTGQVIALDLRCSQLQGKFHSNSSLFQLSNLKRLDLSNNNFIGSLISPKFGEFSDLTHLDLSDSSFTGVIPSEISHLSKLHVLLIGDQYGLSIVPHNFEPLLKNLTQLRELNLYEVNLSSTVPSNFSSHLTTLQLSGTGLRGLLPERVFHLSDLEFLDLSYNSQLMVRFPTTKWNSSASLMKLYVHSVNIADRIPESFSHLTSLHELDMGYTNLSGPIPKPLWNLTNIESLDLRYNHLEGPIPQLPIFEKLKKLSLFRNDNLDGGLEFLSFNTQLERLDLSSNSLTGPIPSNISGLQNLECLYLSSNHLNGSIPSWIFSLPSLVELDLSNNTFSGKIQEFKSKTLSAVTLKQNKLKGRIPNSLLNQKNLQLLLLSHNNISGHISSAICNLKTLILLDLGSNNLEGTIPQCVVERNEYLSHLDLSKNRLSGTINTTFSVGNILRVISLHGNKLTGKVPRSLINCKYLALLDLGNNQLNDTFPNWLGHLSQLKILSLRSNKLHGPIKSSGNTNLFTRLQIMDLSYNGFSGNLPESILGNLQAMKKIDESTRTPEYISDPYDFYYNYLTTITTKGQDYDSVRILDSNMIINLSKNRFEGRIPSIIGDLVGLRTLNLSHNVLEGHIPASFQNLSVLESLDLSSNKISGEIPQQLASLTFLEVLNLSHNHLVGCIPKGKQFDSFGNTSYQGNDGLCGFPLSKLCGGDDQVTTPAELDQEEEEEDSPMISWQGVLVGYGCGLVIGLSVIYIMWSTQYPAWFSRMHLKLEQIVTTRMKKHKKRY | Involved in plant defense. Confers resistance to the fungal pathogen C.fulvum through recognition of the AVR9 elicitor protein.
Subcellular locations: Cell membrane |
ABP1_MAIZE | Zea mays | MAPDLSELAAAAAARGAYLAGVGVAVLLAASFLPVAESSCVRDNSLVRDISQMPQSSYGIEGLSHITVAGALNHGMKEVEVWLQTISPGQRTPIHRHSCEEVFTVLKGKGTLLMGSSSLKYPGQPQEIPFFQNTTFSIPVNDPHQVWNSDEHEDLQVLVIISRPPAKIFLYDDWSMPHTAAVLKFPFVWDEDCFEAAKDEL | Receptor for the plant hormone auxin.
Subcellular locations: Endoplasmic reticulum lumen
Expressed in roots, coleoptiles, leaves, stems, tassels and ears. |
ABP4_MAIZE | Zea mays | MVRRRPATGAAPRPHLAAVGRGLLLASVLAAAASSLPVAESSCPRDNSLVRDISRMQQRNYGREGFSHITVTGALAHGTKEVEVWLQTFGPGQRTPIHRHSCEEVFIVLKGKGTLLLGSSSLKYPGQPQEVPVFQNTTFSIPVNDPHQVWNSNEHEDLQVLVIISRPPVKIFIYDDWSMPHTAAKLKFPYFWDEDCLPAPKDEL | This is probably a receptor for the plant hormone auxin.
Subcellular locations: Endoplasmic reticulum lumen |
ABP5_MAIZE | Zea mays | MVRRRPATGAAQRPQLAAVGRGLLLASVLAAAASSLPVAESSCPRDNSLVRDISRMQQSNYGREGFSHITVTGALAHGTKEVEVWLQTFGPGQRTPIHRHSCEEVFIVLKGKGTLLLGSSSLKYPGQPQEVPVFQNTTFSIPVNDPHQVW | This is probably a receptor for the plant hormone auxin.
Subcellular locations: Endoplasmic reticulum lumen |
ACCD_CICAR | Cicer arietinum | MEKWWFNSMLFNKKLEYRCGLSKSIDSFGPIEKKSEEPSIVTDNDSYSHVDYLVDVSNRQNFLSDKTFLVRDRNSYSYSIFFAIENKILEIDYDSQFNWKNIINSCIENYLRSQICIDSDILDNSFKYNDNDSDVYSYICGKVTNSSQSTSTDVITITNDSEKESFNDDDDFTQKYKHLWVQCESCYGLNYKKFFKSKMNICEHCGDHLKMSSSDRIELLIDPGTWNPRDEDMVSLDPIEFDPIELDPIELDPIELDSEDEPYKTRLDSYQKRTGLSEAVQTGTGQINGIPVAIGIMDFQFMGGSMGSVVGEKITRLIEYATNQLLPLIIVCASGGARMQEGSLSLMQMAKISSALYNYQINQKLFYVAILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGKRVIEQTLNTEVPEGSQSAEFLFEKGLFDSIVPRNLLKEVLGELFQFHGFFPLTQNGN | Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA.
Subcellular locations: Plastid, Chloroplast stroma |
ACCO1_ORYSI | Oryza sativa subsp. indica | MAPTSTFPVINMELLAGEERPAAMEQLDDACENWGFFEILNHGISTELMDEVEKMTKDHYKRVREQRFLEFASKTLKEGCDDVNKAEKLDWESTFFVRHLPESNIADIPDLDDDYRRLMKRFAAELETLAERLLDLLCENLGLEKGYLTKAFRGPAGAPTFGTKVSSYPPCPRPDLVKGLRAHTDAGGIILLFQDDSVGGLQLLKDGEWVDVPPMRHSIVVNLGDQLEVITNGRYKSVMHRVVAQTDGNRMSIASFYNPGSDAVISPAPALVKEEEAVVAYPKFVFEDYMKLYVRHKFEAKEPRFEAFKSMETETSNRIAIA | null |
ACCO1_ORYSJ | Oryza sativa subsp. japonica | MAPTSTFPVINMELLAGEERPAAMEQLDDACENWGFFEILNHGISTELMDEVEKMTKDHYKRVREQRFLEFASKTLKEGCDDVNKAEKLDWESTFFVRHLPESNIADIPDLDDDYRRLMKRFAAELETLAERLLDLLCENLGLEKGYLTKAFRGPAGAPTFGTKVSSYPPCPRPDLVEGLRAHTDAGGIILLFQDDRVGGLQLLKDGEWVDVPPMRHSIVVNLGDQLEVITNGRYKSVIHRVVAQTDGNRMSIASFYNPGSDAVISPAPALVKEEEAVVAYPKFVFEDYMKLYVRHKFEAKEPRFEAFKSMETETSNRIAIA | null |
ACCO1_SOLLC | Solanum lycopersicum | MENFPIINLEKLNGDERANTMEMIKDACENWGFFELVNHGIPHEVMDTVEKMTKGHYKKCMEQRFKELVASKGLEAVQAEVTDLDWESTFFLRHLPTSNISQVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDEQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVLHRVIAQTDGTRMSLASFYNPGSDAVIYPAKTLVEKEAEESTQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKAMESDPIASA | Predominantly expressed in the petals and the stigma and style. |
ACCO2_SOLLC | Solanum lycopersicum | MENFPIINLEKLNGAERVATMEKINDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFKELVAKKGLEGVEVEVTDMDWESTFFLRHLPSSNISQLPDLDDVYREVMRDFRKRLEKLAEELLDLLCENLGLEKSYLKNTFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGRWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGTRMSLASFYNPGNDALIYPAPALVDKEAEEHNKQVYPKFMFDDYMKLYANLKFQAKEPRFEAMKAMESDPIAIA | Leaves. |
ACCO4_SOLLC | Solanum lycopersicum | MENFPIINLENLNGDERAKTMEMIKDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFKELVASKGLEAVQAEVTDLDWESTFFLRHLPTSNISQVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDEQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQTDGTRMSLASFYNPGNDAVIYPAPSLIEESKQVYPKFVFDDYMKLYAGLKFQPKEPRFEAMKAMEANVELVDQIASA | Expressed in all of the floral organs examined apart from the sepals. |
ADH1A_MAIZE | Zea mays | MASPAMVPLRQLFVDGEWRPPAQGRRLPVVNPTTEAHIGEIPAGTAEDVDAAVAAARAALKRNRGRDWARAPGAVRAKYLRAIAAKVIERKPELAKLEALDCGKPYDEAAWDMDDVAGCFEYFADQAEALDKRQNSPVSLPMETFKCHLRREPIGVVGLITPWNYPLLMATWKIAPALAAGCTAVLKPSELASVTCLELADICKEVGLPSGVLNIVTGLGPDAGAPLSAHPDVDKVAFTGSFETGKKIMASAAPMVKPVTLELGGKSPIVVFDDVDIDKAVEWTLFGCFWTNGQICSATSRLLIHTKIAKKFNERMVAWAKNIKVSDPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGGVRPAHLEKGFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYQSPSKL | Dehydrogenase that catalyzes the oxidation of several aminoaldehydes . Metabolizes and detoxifies aldehyde products of polyamine degradation to non-toxic amino acids (Probable). Catalyzes the oxidation of 4-aminobutanal and 3-aminopropanal to 4-aminobutanoate and beta-alanine, respectively . Catalyzes the oxidation of 4-(trimethylamino)butanal and 4-guanidinobutanal to 4-trimethylammoniobutanoate and 4-guanidinobutanoate, respectively . Catalyzes the oxidation of betaine aldehyde to glycine betaine .
Dehydrogenase that catalyzes the oxidation of several aminoaldehydes . Catalyzes the oxidation of betaine aldehyde to glycine betaine . Catalyzes the oxidation of 4-(trimethylamino)butanal to 4-trimethylammoniobutanoate . |
ADH1B_MAIZE | Zea mays | MMASQAMVPLRQLFVDGEWRPPAQGRRLPVVNPTTEAHIGEIPAGTAEDVDAAVAAARAALKRNRGRDWARAPGAVRAKYLRAIAAKVIERKQELAKLEALDCGKPYDEAAWDMDDVAGCFEYFADQAEALDKRQNSPVSLPMETFKCHLRREPIGVVGLITPWNYPLLMATWKVAPALAAGCAAVLKPSELASVTCLELADICKEVGLPPGVLNIVTGLGPDAGAPLSAHPDVDKVAFTGSFETGKKIMAAAAPMVKPVTLELGGKSPIVVFDDVDIDKAVEWTLFGCFWTNGQICSATSRLLVHTKIAKEFNEKMVAWAKNIKVSDPLEEGCRLGPVVSEGQYEKIKKFILNAKSEGATILTGGVRPAHLEKGFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPSKL | Dehydrogenase that catalyzes the oxidation of several aminoaldehydes . Metabolizes and detoxifies aldehyde products of polyamine degradation to non-toxic amino acids (Probable). Catalyzes the oxidation of 4-aminobutanal and 3-aminopropanal to 4-aminobutanoate and beta-alanine, respectively . Catalyzes the oxidation of 4-(trimethylamino)butanal and 4-guanidinobutanal to 4-trimethylammoniobutanoate and 4-guanidinobutanoate, respectively . Catalyzes the oxidation of betaine aldehyde to glycine betaine . |
AGP1_ORYSJ | Oryza sativa subsp. japonica | MARLHLVVVAMAALFAAAAVAQGPSASPTPAPKAQPPVATPPTRPPAVAPVSPPAAQPPVTTPPPVSAPAPVPAPSAAATPSPQASAPTAEPPVLSPPAPAPGSISQSPTEAPTSPPPPSAASGVSPSAAAVVAAWAAVAAVAAFY | Proteoglycan that seems to be implicated in diverse developmental roles such as differentiation, cell-cell recognition, embryogenesis and programmed cell death.
Subcellular locations: Vacuole, Aleurone grain membrane
Expressed in roots, stems, leaves, flowers and seeds. |
ALA2_HORVU | Hordeum vulgare | MAATVAVDNLNPKVLKCEYAVRGEIVIHAQRLQEQLKTQPGSLPFDEILYCNIGNPQSLGQQPVTFFREVLALCDHPDLLQREEIKTLFSADSISRAKQILAMIPGRATGAYSHSQGIKGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYKIASVNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITCNEAEGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPAVISRFTVFHEAFMSEYRD | Transfer of C3 units between the cytosol of mesophyll and bundle sheath cells to maintain a nitrogen-carbon balance in the C4-dicarboxylic pathway. |
ALA2_PANMI | Panicum miliaceum | MAATVAVENLNPKVLKCEYAVRGEIVIHAQHLQQQLQTQPGSLPFDEILYCNIGNPQSLGQQPVTFFREVLALCDHPCLLEKEETKSLFSADAISRAKQILSTIPGRATGAYSHSQGIKGLRDAIAAGIASRDGFPANADDIFVTDGASPGVHMMMQLLIRNEKDGILCPIPQYPLYSASIALHGGTLVPYYLDEKTGWGLEISDLKKQLEDARSKGIDVRALVVINPGNPTGQVLAEDNQCDIVRFCKNEGLVLLADEVYQENIYVDDKKFNSFKKIARSVGYGEDDLPLVSFQSVSKGYYGECGKRGGYMEITGFSAPVREQIYKIASVNLCSNITGQILASLVMNPPKVGDESYAAYKAEKDGILQSLARRAKALEDAFNNLEGISCNKAEGAMYLFPQIHLPKKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHIRCTILPQEDKIPAVITRFKAFHEAFMAEYRD | Transfer of C3 units between the cytosol of mesophyll and bundle sheath cells to maintain a nitrogen-carbon balance in the C4-dicarboxylic pathway.
Mesophyll and bundle sheath cells. |
ALL50_SOYBN | Glycine max | ANPTFGFTPLGLSSDAN | null |
AMP_LYMAR | Leymus arenarius | AQKCGEQGRGAKCPNCLCCGRYGFCGSTPDYCGVGCQSQCRGCR | Binds chitin (By similarity). Has antifungal activity against F.oxysporum 16/10 (IC(50)=4.1 uM) and B.sorokiniana 6/10 (IC(50)=2.7 uM) . Inhibits germination of fungal spores . |
AMP_TRIKH | Triticum kiharae | MKPHMSATVLRAPRVAAILLAVVLAAVLATAVNGAQRCGDQARGAKCPNCLCCGKYGFCGSGDAYCGAGSCQSQCRGCRDDVVGQALPAEPGSTRATAASSASARGLNLTATTGGP | Binds chitin. Has antifungal activity against the fungi F.solani (IC(50)=5 ug/ml), F.verticillioides (IC(50)=30 ug/ml), F.oxysporum (IC(50)=5 ug/ml), B.sorokiniana (IC(50)=5 ug/ml), B.cinerea (IC(50)=20 ug/ml) and N.crassa (IC(50)=10 ug/ml). Inhibits hyphal elongation and causes browning of hyphae in F.oxysporum. Causes destruction and discoloration of spores in B.sorokiniana. Inhibits the development of disease caused by the fungus P.infestans on potato tubers. Has antibacterial activity against the Gram-negative bacteria P.syringae and E.carotovora, and the Gram-positive bacterium C.michiganensis.
Has antifungal activity against F.verticillioides (IC(50)=2.7 ug/ml). At concentrations between 45 uM and 225 uM, inhibits activity of metalloproteinase fungalysin Fv-cpm from F.verticillioides. |
AOC_ORYSI | Oryza sativa subsp. indica | MAAAAPSRVSVRAAAPGQTGGFAKIRPQVVVAAAARSAGVSGRRARSVRASLFSPKPATPKDARPAKVQEMFVYEINERDRESPAYLRLSAKQTENALGDLVPFTNKLYSGSLDKRLGISAGICILIQHVPERNGDRYEAIYSFYFGDYGHISVQGPYLTYEESYLAVTGGSGVFEGAYGQVKLNQIVFPFKIFYTFYLKGIPDLPRELLCTPVPPSPTVEPTPAAKATEPHACLNNFTN | Involved in the production of 12-oxo-phytodienoic acid (OPDA), a precursor of jasmonic acid (JA). Required for the production of JA in response to wounding. Necessary for flower and coleoptile development regulation by light, including blue (BL), red (RL) and far red (FR) lights. Involved in the auxin-mediated signaling pathway leading to growth stimulation. Essential for photodestruction of phyA upon activation by RL and FR. Implicated in responses to salt stress (NaCl).
Confers resistance to incompatible strains of the blast fungus Magnaporthe grisea, jasmonic acid (JA) thus playing a significant role in the resistance to fungal infection. Implicated in riboflavin-induced resistance to the sheath blight Rhizoctonia solani. Required for Pseudomonas fluorescens-mediated JA-dependent induced systemic resistance (ISR). Confers some resistance, independently of the JA pathway but probably via OPDA accumulation, to brown planthopper (BPH, Nilaparvata lugens), a destructive, monophagous, piercing-sucking insect, mainly by reducing its feeding activity and survival rate. Triggers resistance to the chewing insect striped stem borer (SSB) Chilo suppressalis, to the root hemiparasite witchweed Striga hermonthica, and to the root feeder insect rice water weevil Lissorhoptrus oryzophilus, in a JA-dependent manner, by attenuating both the growth mass and growth rate of caterpillars.
Subcellular locations: Plastid, Chloroplast |
AOC_ORYSJ | Oryza sativa subsp. japonica | MAAAAPSRVSVRAAAPGQTGGFAKIRPQVVVAAAARSAGVSGRRARSVRASLFSPKPATPKDARPAKVQEMFVYEINERDRESPAYLRLSAKQTENALGDLVPFTNKLYSGSLDKRLGISAGICILIQHVPERNGDRYEAIYSFYFGDYGHISVQGPYLTYEESYLAVTGGSGVFEGAYGQVKLNQIVFPFKIFYTFYLKGIPDLPRELLCTPVPPSPTVEPTPAAKATEPHACLNNFTN | Involved in the production of 12-oxo-phytodienoic acid (OPDA), a precursor of jasmonic acid (JA) (, ). Required for the production of JA in response to wounding (, ). Necessary for flower and coleoptile development regulation by light, including blue (BL), red (RL) and far red (FR) lights ( ). Involved in the auxin-mediated signaling pathway leading to growth stimulation (, ). Essential for photodestruction of phyA upon activation by RL and FR . Implicated in responses to salt stress (NaCl) .
Confers resistance to incompatible strains of the blast fungus Magnaporthe grisea, jasmonic acid (JA) thus playing a significant role in the resistance to fungal infection . Implicated in riboflavin-induced resistance to the sheath blight Rhizoctonia solani . Required for Pseudomonas fluorescens WCS374r-mediated JA-dependent induced systemic resistance (ISR) against M.oryzae . Confers some resistance, independently of the JA pathway but probably via OPDA accumulation, to brown planthopper (BPH, Nilaparvata lugens), a destructive, monophagous, piercing-sucking insect, mainly by reducing its feeding activity and survival rate (, ). Triggers resistance to the chewing insect striped stem borer (SSB) Chilo suppressalis, to the root hemiparasite witchweed Striga hermonthica, and to the root feeder insect rice water weevil Lissorhoptrus oryzophilus, in a JA-dependent manner, by attenuating both the growth mass and growth rate of caterpillars ( ).
Subcellular locations: Plastid, Chloroplast
Expressed in leaf sheath, flag leaf, first leaf and, at high levels, in panicles. |
AP24_ORYSI | Oryza sativa subsp. indica | MAATFYGVGSIALAMHEDDEEEGSGRVFGFAAGDLVRPAVVTQQLFPMTAAAAAVVPESTEQRHVAAAAEQWARPPSRKTRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAQAAARAYDQAAIKFRGVEADINFTLDDYKEDIKKMNNFSKEEFVQVLRRQGVGFVRGSSRFRGVTLHKCGKWEARIGQLMGKKYVYLGLYDTEMEAAKAYDKAAIKCCGKEAVTNFDTQSYEDELNLQSWDSELDLELSLGCSGGERAAGEVLHSAPSNQRTSLTFMLPEEEEMTACHRQRSIWARPSLAPAMPDGGAVICPDQHQHHPSSRNMLLMSQVISSGGGGGSGRQGAAELHMRPRHGWSSGGNNWAPPYAARPRLPGAEDDDDDDSAAAASSGFPMGQVATASSSSRPSSSSCSSRRSSTAAATATTGR | Probable transcription factor (By similarity). Involved in spikelet transition. Prevents lemma and palea elongation as well as grain growth (By similarity).
Subcellular locations: Nucleus |
AP24_ORYSJ | Oryza sativa subsp. japonica | MAATFYGVGSIALAMHEDDEEEGSGRVFGFAAGDLVRPAVVTQQLFPMTAAAAAVVPESTEQRHVAAAAEQWARPPSRKTRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAQAAARAYDQAAIKFRGVEADINFTLDDYKEDIKKMNNFSKEEFVQVLRRQGAGFVRGSSRFRGVTLHKCGKWEARIGQLMGKKYVYLGLYDTEMEAAKAYDKAAIKCCGKEAVTNFDTQAYEDELNLQSWDSELDLELSLGCSGGERAAGEVLHSAPSNQRTSLTFMLPEEEEMTACHRQRSIWARPSLAPAMPDGGAVIRPDQHQHHPSSRNMLLMSQVISSSGGGGGSGRQGAAELHMRPRHGWSSGGNNWAPPYAARPRLPGAEDDEDDDSAAAASSGFPMGQVATASSPSRPSSSSCSSRRSSTAAATATTGR | Probable transcription factor (By similarity). Involved in spikelet transition (Probable). Prevents lemma and palea elongation as well as grain growth .
Subcellular locations: Nucleus |
AP25_ORYSJ | Oryza sativa subsp. japonica | MAATTTIPLLLLLLAATVAAAAAELSVYHNVHPSSPSPLESIIALARDDDARLLFLSSKAATAGVSSAPVASGQAPPSYVVRAGLGSPSQQLLLALDTSADATWAHCSPCGTCPSSSLFAPANSSSYASLPCSSSWCPLFQGQACPAPQGGGDAAPPPATLPTCAFSKPFADASFQAALASDTLRLGKDAIPNYTFGCVSSVTGPTTNMPRQGLLGLGRGPMALLSQAGSLYNGVFSYCLPSYRSYYFSGSLRLGAGGGQPRSVRYTPMLRNPHRSSLYYVNVTGLSVGHAWVKVPAGSFAFDAATGAGTVVDSGTVITRWTAPVYAALREEFRRQVAAPSGYTSLGAFDTCFNTDEVAAGGAPAVTVHMDGGVDLALPMENTLIHSSATPLACLAMAEAPQNVNSVVNVIANLQQQNIRVVFDVANSRVGFAKESCN | Anther-specific aspartic protease involved in tapetal programmed cell death (PCD). Directly regulated by the transcription factor EAT1/DTD in anthers during tapetum PCD and degeneration. |
APM1A_ORYSJ | Oryza sativa subsp. japonica | MAAAEQSAEQFRGQARLPGFAAPRRYDLRLVPDLDGCAFTGSVDVSVDVTAPTRFLVLNAAELEVSPGGVQFKPHGAEQELHPAEVTNVPEDEILIIRFNEVLPVGEGTLVIAFKGTLNDKMHGFYRSVYELNGEKKNMAVTQFEPADARRCFPCWDEPSFKAIFKITLEVPSETVALSNMPVVEEKVNGLIKAVYFQETPIMSTYLVAVIVGMFDYVEAFTTDGTRVRVYTQVGKSAQGKFALEVAVKTLVLFKEYFAVPYPLPKMDMIAIPDFASGAMENYGLVTYRETALLFDEKHSAAANKQRVAVVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADNFFPEWNVWTQFLEESTTGFKLDALAGSHPIEVDVNHVDEIDEIFDAISYRKGAAVIRMLQSYLGAETFQKSLAAYIEKFAYSNAKTEDLWAALEEGSGEPVKTLMHSWTKQQGYPVVNVKLKDGKLEMEQTQFLSSGAEGVGQWVVPITLCCCSYSRQEKFLFNGKQEDFNLSGLVECQKKEDFWIKLNVNQTGFYRVSYDEELASRLRYAIEANKLSAADRYGVLDDTYALCMAGKQKLVSLLHLIAAYKDETEYTVLARVIDTSLSIVEMVAVAAPEGLGKLKKFLIDFLEPFAQRIGWDAKSGEGHLDALLRGTLLTALAELGHEATINEAVRRFNIFVEDRETPLLPPDVRKAAYVALMQTVNKSNRAGYESLLKIYKETDLSQEKVRILGSLASCPDPDVVRDTLDFMLSPEVRNQDSIFLLRGVGAAGHEVAWTWLKEKWDYISDTFSGTLLTYFVSTTVSPLRTDEMGDDAEEFFKSRTKANIARTVKQSIERVRINAKWVESTRAEANLGNVLKEISHDH | Subcellular locations: Membrane, Microsome membrane, Cytoplasm
The dileucine internalization motif may be involved in intracellular sequestration. |
APM1B_ORYSJ | Oryza sativa subsp. japonica | MAASPEQFRGQARLPRCASPLSYDLRLRPDLAACAFSGSAAVAVAVSAPTRFLVLNAAELAVDGSSVRFQDLVPSEVVQFEEDEIVVIGFGQDLPIGEGVLKMDFTGTLNDQMRGFYRSKYEYKGESRNMAVTQFEAADARRCFPCWDEPAFKAKFKLTLEVPSELVALSNMPVIKETVHGPLKTVYYEESPLMSTYLVAIVVGLFDYIEGSTLEGTKVRVYTQVGKSNQGKFALDVAVKSLDLFKDYFATPYPLPKLDMVAIPDFAAGAMENYGLVTYRETALLYDELLSSASNKQQVAITVAHELAHQWFGNLVTMEWWTHLWLNEGFASWVSYLAVEALFPEWNNWTQFLDETTSGLRLDALAESHPIEVDINHASEIDAIFDSISYDKGASVIRMLQSYLGAERFQKALASYIKKYAYSNAKTEDLWAVLEEESGEPVKDLMTTWTKQQGYPVIYAKLDGHDLHLEQAQFLSDGSSGPGLWIVPITSCCGSYDAQKKFLLKGKTDKVHIDLTASQNAGGEKGENCWIKLNVDQTGFYRVKYDDELAAGLEKAIKANKLSLMDKIGIVEDSYSLSVARKQTLTSLLRLLNAYRNESDYTVLSHVTSVCLGIDKISVDATPELSRDIKQLLINLLLSAAKTLGWDPKEGESHLDVMLRSLLLIALVKLGHDETINEGVRRFHIFIKDRKTNILPPDTRKASYLAVMRTVTTSSRAGYDALLKIYRETAEAQEKSRILGSLSSCLDKDIVLEALNFMLTDEVRNQDAFYVLGGISLEGREVAWAWLKENWDHVLKTWPSSSLISDFVKSTVSRFTTEEKAAEVSEFFAGKTKPSFERALKQSLERVRISARWIESIRSEPNLAQTVNELLQHDM | Subcellular locations: Membrane, Microsome membrane, Cytoplasm
The dileucine internalization motif may be involved in intracellular sequestration. |
APM1C_ORYSJ | Oryza sativa subsp. japonica | MAPAPAPAGSADQFRGQARLPRFAAPRRYELRLRPDLDACVFTGDASVVVDVSAPTRFLVLNAADLAVDRASIRFQGLAPTEVSLFEDDEILVLEFDGELPLGEGVLAMDFNGTLNDQMRGFYRSKYEYKGETKNMAVTQFEAVDARRCFPCWDEPAFKAKFKLTLEVPSELVALSNMPVACETIAGPIKTIHYEESPLMSTYLVAIVVGLFDYVEGVTSEGNKVRVYTQVGKSSQGKFALDIGVKSLNFYKDYFDTPYPLPKLDMVAIPDFAAGAMENYGLVTYREVSLLFDEQSSSASFKQNVAITVAHELAHQWFGNLVTMEWWTHLWLNEGFATWMSHLSVDSFFPQWNIWTQFLDSTTSALKLDSQAESHPIEVEIHHASEVDEIFDAISYDKGASVIRMLQSYLGAERFQKALTSYIKKYAYSNAKTEDLWAVLEEVSGEPVKDLMTTWTKQQGYPVISVKLKGHDLELEQDQFLLNGTSGAGIWIVPITLGCCSHDKQKRLLLKHKHDNIKAIVSQCDSRQKGGNFWIKLNIDETGFYRVKYDDELTAALRNALQAKKLSLMDEIGIVDDAHALSIACKQTLSSLLHLLYAFRDEADYSVLSHINSVTSSVAKISIDATPDLAGDIKQLFIKLLLPPAKKLGWDPKDGESHLNAMLRPMLLVALVQLGHDKTINEGFRRFQIFFDDRNTSLLTPDTRKAAYLSVMHNVSSTNRSGYDALLKVYRKSAEGEEKLRVLGTLSSCQDKDIVLESLNLIFTDEVRNQDAYRVLGGVIIEARETAWSWLKENWDRISEAFSGSSLISDFIRSIVTLFTSKEKEAEISQFFATRTKPGYERTLKQSLERVLINARWIEGIRGEAKLAQTVHELLHKP | Subcellular locations: Membrane, Microsome membrane, Cytoplasm
The dileucine internalization motif may be involved in intracellular sequestration. |
APM1D_ORYSJ | Oryza sativa subsp. japonica | MAAAAAEFRGQARLPRFAAPRRYELRLRPDLAACVFSGEASVAVDVSAPTRFLVLNAADLAVDRASIRFQGLAPAEVSVFEEDEILVLEFAGELPLGEGVLAMRFNGTLNDQMRGFYRSKYEYKGETKNMAVTQFESVDARRCFPCWDEPSFKAKFKLTLEVPSELVALSNMPIVNEKIAGPIKTVEYEESPVMSTYLVAIVVGLFDYIEGVTSEGNKVRVYTQVGKSNQGKFALDVGVKSLNLYKEFFDTPYPLPKLDMVAIPDFTNGAMENYGLVTYREIYLLFDEQSSSASTKQNVAITVAHELAHQWFGNLVTMEWWTHLWLNEGFATWMSYLAVDSFFPEWNIWTQFLDSTTSALKLDSLAESHPIEVEIHHASEIDSIFDSISYDKGASVIRMLQSYLGAERFQKALASYIKKYAYSNAKTEDLWAVLEEVSGEPVKNLMTTWTKKQGYPVIGVKLKGHDVELEQDQFLLDGSSDSGMWIVPITLGCNSHDMQKRFLLKHKFSDIKGINSQYDDQDRQNSGNFWIKLNIDETGFYRVKYDDELTTALRNALQMKKLSLMDKIGIVEDAHALSIAGKQTLSSLLHLLYACRDEDDFSVLSHINSVTSSVAKISIDATPELAGEIKQLFIKLLLPTAEKLGWDPKNSESHLDAMLRPVLLVGLVQLGHDKTISEGVRRFQIFFDDRNTSLPPDTRKAAYLSVMHNVSSTNRSGYDALLKIYRESTEVEERLNVLGILSSCQDKDIVLESLNFIFTDEVRNQDAYLVLRSVIIDARETAWSWLKENWDRITKTFAASAILSDYVKSIVTLFTSKEKEAEISQFFATRTKPGFKRALKQSLENVRISARWVDGIRGEAELAQTVHDLLIKL | Subcellular locations: Membrane, Microsome membrane, Cytoplasm
The dileucine internalization motif may be involved in intracellular sequestration. |
ARFR_ORYSJ | Oryza sativa subsp. japonica | MITFVDSAAKERERESDKCLDPQLWHACAGGMVQMPPVSSKVYYFPQGHAEHAQGHGPVEFPGGRVPALVLCRVAGVRFMADPDTDEVFAKIRLVPVRANEQGYAGDADDGIGAAAAAAAQEEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGVGGPEFLPPPPPPPPTPAAGGNYGGFSMFLRGDDDGNKMAAAARGKVRARVRPEEVVEAANLAVSGQPFEVVYYPRASTPEFCVKAGAVRAAMRTQWFAGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPWRLLQVSWDEPDLLQNVKRVSPWLVELVSNMPAIHLAPFSPPRKKLCVPLYPELPIDGQFPTPMFHGNPLARGVGPMCYFPDGTPAGIQGARHAQFGISLSDLHLNKLQSSLSPHGLHQLDHGMQPRIAAGLIIGHPAARDDISCLLTIGSPQNNKKSDGKKAPAQLMLFGKPILTEQQISLGDAASVDVKKSSSDGNAENTVNKSNSDVSSPRSNQNGTTDNLSCGGVPLCQDNKVLDVGLETGHCKVFMQSEDVGRTLDLSVVGSYEELYRRLADMFGIEKAELMSHVFYRDAAGALKHTGDEPFSEFTKTARRLNILTDTSGDNLAR | Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
Subcellular locations: Nucleus
Expressed in roots, culms, leaves and young panicles. |
ARFS_ORYSJ | Oryza sativa subsp. japonica | MMKQAQQQPPPPPASSAATTTTAMAAAAAAAVVGSGCEGEKTKAPAINSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICLLHNVTLHADPETDEVYAQMTLQPVTSYGKEALQLSELALKQARPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEELGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFICPPPFFGAKRPRQLDDESSEMENLLKRAMPWLGEEICIKDPQTQNTIMPGLSLVQWMNMNMQQSSSFANTAMQSEYLRSLSNPNMQNLGAADLSRQLCLQNQLLQQNNIQFNTPKLSQQMQPVNELAKAGIPLNQLGVSTKPQEQIHDASNLQRQQPSMNHMLPLSQAQTNLGQAQVLVQNQMQQQHASSTQGQQPATSQPLLLPQQQQQQQQQQQQQQQQQQQQKLLQQQQQQLLLQQQQQLSKMPAQLSSLANQQFQLTDQQLQLQLLQKLQQQQQSLLSQPAVTLAQLPLIQEQQKLLLDMQQQLSNSQTLSQQQMMPQQSTKVPSQNTPLPLPVQQEPQQKLLQKQAMLADTSEAAVPPTTSVNVISTTGSPLMTTGATHSVLTEEIPSCSTSPSTANGNHLLQPILGRNKHCSMINTEKVPQSAAPMSVPSSLEAVTATPRMMKDSPKLNHNVKQSVVASKLANAGTGSQNYVNNPPPTDYLETASSATSVWLSQNDGLLHQNFPMSNFNQPQMFKDAPPDAEIHAANTSNNALFGINGDGPLGFPIGLGTDDFLSNGIDAAKYENHISTEIDNSYRIPKDAQQEISSSMVSQSFGASDMAFNSIDSTINDGGFLNRSSWPPAAPLKRMRTFTKVYKRGAVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDDILLLGDDPWEEFVGCVKCIRILSPQEVQQMSLEGCDLGNNIPPNQACSSSDGGNAWRARCDQNSGNPSNGSYEQFE | Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
Subcellular locations: Nucleus
Expressed in roots, culms, leaves and young panicles. |
ARFT_ORYSJ | Oryza sativa subsp. japonica | MAQPPDAAAAAAVPPPVVIDRDVWHACAVPYSGVLPGVGTLVYYIPHGHIEQCAEDPALLLSRLPDPIHPVPCTVADLVLDVDAESGEAYATISLLPGSHDDTTARRQVPAHGEPGFRFFEKQLSPADVTSNALVLPAGAEHVLPPLDIAAYQTARLFDVRDLRGKRFEFVHIWDKKRCRYMLGDLGVNDNDGWRGFVKAKRLATRDTVVFMRRGGGDGDGDGELLVGVRRAPRARGGHHPRPGVEDNKVVSEVWLAMQGVTPFEVTYYPREGTFEFVVSRDEYIGFSFSPFYPFVPGTTVHLRMNPLQIAQSISGTVRTFDHLRPWRMLEVDWDQAASPISYRIHRQVNSWQVLRQPQPAATTSAVRIRDAIVATPQVQIMALPRPPPPTTTTGMVPSDDSYAMISLFPGDCYVTHRPLPAARDPVGGQREFCFFDKKLSPSDAAANGGGSGALFVIPKPSAAEHVLPRIPDLRVTNLQGGRWEFGHTWSDADTDRRSSSHTLAAGWSAFVKAKRLCVGDTVIFMRRRPGGEPLVGVRRKPHGGMPVGIPDKHVADAWLDASSAQPFRVTYCPWQGTAEFVVRREEVEGSPPLAPGTRVRLLMNPDDARRRSQPPVYGTVRDVHCRSEWRMLEVDWDRDSPLAPTMNRRVNSWQVQPVQLALPPQGSDEEAAAATTSTAHAGDATTSAPSLALQLQTMASSSSSSAPIIPSRGSAFRIVNPRDGSQG | Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
Subcellular locations: Nucleus |
ARFU_ORYSJ | Oryza sativa subsp. japonica | MASSGGGGGGGEEGEGRGATKVNQELWYACAGPLVSLPPQGSLIVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLICILHSVTMLADPDTDEVYARMTLQPVSNVTQCDKETLLASELALKQTRPQTEFFCKTLTASDTSTHGGFSVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSQFTIYYNPRASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKTSHWRNIQVAWDEAAPTERRTRVSLWEIEPIIAPFFIYPSPLFTAKRPRLPGMTDDETEMDGLLKRAMPWVGEEICKKDLNIQNSVVPGLNLAQWMNMQHSSSLPGTVVQPELLNSLSGKPVQNLAAADLSRQISFHPQFLQQNNIQFNTALVPQQNQQTEQLAKVIPTPNQLGSVIIPQKVVQDCNSEQRQHVVTQPVQGSQPNINIPQPQLVVQAQLQQPQVILQAQLQQPQVVVQAQLQQTQPSVQSHTVLQGGLQQIQLLQQQQPHVQHQQIPQQLHHQQQQTQQLQPVQQVQQSVQEHQQIKIQPVHVSMDASMNTQVADHQMKLQLLKALQPQQPLISEQQKMLLDLQQQVINSQSAPQQCVQVTNQAISLHNSNTIQYPTQQKVQSHQVQDLTGNVIPNSKSDIATSMGASSLHVAGGRQLLKTDDVPSTSTSPSTNSNPVLLQSIPSSSKNQSLTTAGKTSQSSVVLGPTIEQDTKPYQNVKQTVMIPKTTEQRPATGQDCINNNPQMDYLDTSSSATSVCLSQADGSLQQNFPPSSFHQHHLLKDTVPDSEFEVTDPRNNLLFGVNIDGQLGLPLNADLLANDIGTDKYMDQLPGNGISNFISSKDSQQELSSSMISHSFGVADMAFNSIDSAINDTPFLNRNSRSAAGPAHQRMRTYTKVHKRGAVGRSIDINRYSGYDELKHDVARMFGIEGQLGDQNRVGWKLVYEDHEKDVLLVGDDPWEDFVKCVRCIRILSPQEEMQMRLVGDFGDSFLPNQACSSSDGGHPWRITGD | Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
Subcellular locations: Nucleus
Expressed in roots, culms, leaves and young panicles. |
ARFV_ORYSJ | Oryza sativa subsp. japonica | MKEVGEVEEVRCLDPQLWHACAGGMVQMPAPRSRVYYFAQGHAEHADGGGGAAAAAAELGPRALPPLVLCRVEGVQFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEPSPEKPTSFAKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMECMSGWNAPGYGGGGFSAFLKEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSGQPFEVAYYPRASTPDFVVKAASVQAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVADPNRWPNSPWRLLQVTWDEPDLLQNVKCVSPWLVELVSSIPPIHLGPFSSPRKKLRVPPHPDFPFEGHLLNPIFHGNPLGPSNSPLCCYPDTAPAGIQGARHAQFGLPLTDHQLNKLHLGLLHSGSFNRLDAITPPSRISKGFVVSSAPAHDNISCLLSISTPQVAEKSDDRKTTPHIMLFGKAIFTEQQITSSGSTETLSPGVTGNSSPNGNAHKTGNASDGSGSSICIGFSSQGHEASDLGLEAGHCKVFMESEDVGRTIDLSVFGSYEELYGRLADMFGIEKEEIINHLHFRDAAGVVKHPGEVPFSDFMKAARRLTIIAGDRERIERPLIECLVEQA | Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
Subcellular locations: Nucleus
Expressed in roots, culms, leaves and young panicles. |
ARFW_ORYSI | Oryza sativa subsp. indica | MATAEVGGGGGEGDAAAAAVARAGGGGGGGGGGGEDALFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLYNLPWKILCEVMNVELKAEPDTDEVYAQLTLLPELKQQEDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPYDRYMESLKRNYSIGMRFKMRFEGEEAPEQRFTGTIVGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEPAVSPPPVNPLPVPRTKRLRPNATALPADSSAIAKEAATKVVVESEPNGTQRTFQTQENATPKSGFGNSSELESAQKSIMRPSGFDREKNNTPIQWKLGSDGWMQMSKPESYSEMLSGFQPPKDVQTPQGFCSLPEQITAGHSNFWHTVNAQYQDQQSNHNMFPSSWSFMPPNTRLGLNKQNYSMIQEAGVLSQRPGNTKFGNGVYAALPGRGTEQYSGGWFGHMMPNSHMDDTQPRLIKPKPLVVAHGDVQKAKGASCKLFGIHLDSPAKSEPLKSPSSVVYDGTPQTPGATEWRRPDVTEVEKCSDPSKAMKPLDTPQPDSVPEKPSSQQASRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELIAELDDMFDFNGELKGPKKEWMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRMNPGTLNSRSEDSHANSMERGSVGREMRGCLSTSSLNSENC | Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
Subcellular locations: Nucleus |
ARFW_ORYSJ | Oryza sativa subsp. japonica | MATAEVGGGGGEGDAAAAAVARAGGGGGGGGGGGEDALFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLYNLPWKILCEVMNVELKAEPDTDEVYAQLTLLPESKQQEDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPYDRYMESLKQNYSIGMRFKMRFEGEEAPEQRFTGTIVGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEPAVSPPPVNPLPVPRTKRLRPNATALPADSSAIAKEAATKVVVESEPNGTQRTFQTQENATPKSGFGNSSELESAQKSIMRPSGFDREKNNTPIQWKLGSDGRMQMSKPESYSEMLSGFQPPKDVQIPQGFCSLPEQITAGHSNFWHTVNAQYQDQQSNHNMFPSSWSFMPPNTRLGLNKQNYSMIQEAGVLSQRPGNTKFGNGVYAALPGRGTEQYSGGWFGHMMPNSHMDDTQPRLIKPKPLVVAHGDVQKAKGASCKLFGIHLDSPAKSEPLKSPSSVVYDGTPQTPGATEWRRPDVTEVEKCSDPSKAMKPLDTPQPDSVPEKPSSQQASRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELIAELDDMFDFNGELKGPKKEWMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRMNPGTLNSRSEDSHANSMERGSVGREMRGCLSTSSLNSENC | Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
Subcellular locations: Nucleus
Expressed in roots, culms, leaves and young panicles. |
ARFX_ORYSJ | Oryza sativa subsp. japonica | MAAAATAAASPVEGLTGGGGGGGGGVDGLFVELWRACAGPLVTVPAVGERVFYLPQGHIEQVEASTNQVAEQQGAPLYNLPWKIPCKVMNVELKAEPDTDEVYAQLTLLPEKQQDGNGSGNGNVSKDKVEEEEVVPPAATERPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMHLGVLATAWHAVNTGTMFTVYYKPRTSPSEFVVPRDLYKESLKRNHSIGMRFKMTFEGEEAAEQRFTGTIVGVGDSDPSGWADSKWRSLKVRWDEAASVPRPDRVSPWQIEPANSPSPVNPLPAPRTKRARPNVLASSPDLSAVNKEVASKVMANSQQNGLPRAFHSQENMNLRSRFGDSNELNTSQKLTMWSSGSNQEKNNVSVQRELGSQSWMQMRRPDGSSEILSGFQPLKDTRNPLSSFPSQISGNRSNTWNTINVHYPDQNANHNMYPGTWSLMPPNTGFGVNQQNYLMTPDITLPQRSLNAKFGGNGAFTSLRAHGIDQRSSGWLGHIEPSSHIDDASSSLIKPQPLVIDHNVQKAKGSSCMLFGISLDSPAKPELLISPPSVAFDGKLQQDALEEDECSDPSKTVKPLDGAQHDSAREKHQSCPDGTKNIQSKQQNGSSRSCKKVHKQGIALGRSIDLTKFTCYDELIAELDQMFDFNGELNSSSKNWMVVYTDNEGDMMLVGDDPWNEFCNMVHKIFIYTREEVQKMNPGALNSRSEDSRSTSVERGLVGEGLQGGLSTPSLNSENC | Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
Subcellular locations: Nucleus
Expressed in roots, culms, leaves and young panicles. |
ARFY_ORYSJ | Oryza sativa subsp. japonica | MKLSPPASADMPQALPENDGEQRCLNSELWHACAGPLVSLPVVRSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLICQLHNVTMHADAETDEVYAQMTLQPLSPEEQKEPFLPMELGAASKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIWNDNNQLLLGIRRANRQQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITSISDLDSVRWPNSHWRSVKVGWDESTTGDKQPRVSLWEIEPLTTFPMYPSAFPLRLKRPWASGLPMHGMFNGGGNDDFARYSSLMWLRDGNRGTQSLNFQGHGVSPWLQPRIDSPLLGLKPDTYQQMAAAALEEIRYGDPSKQHPATLQYQQTHNLNSGLNSLFASHVLGQVQFQPQQSPLQVVQQGHCQNTGDSGFLQGQLPRLQLHNTQQLLKEQELQQQQRQHVLQEQSSQEMQQQLPSSDHHVADVASESGSAPQAQSSLLSGSSFYNQNLLEGNSDPPLHLHNNFHNFSNQEASNLLILPRSSQLMASDGWPSKRLTLESAVHPEAPSMHPKIEKVNHQGISHFPGAFPPQSARGCSIVQDCRADAENRLLSSSFELQDGMTSIITDANRETDTMAIPLLRYSGADLTTENTLATSNCLGESGTFNPLNNISVNPSQGATFVKVYKSGSLGRSLDISRFSSYCELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILLVGDDPWQEFANSVWCIKILSPQEVQQLVRGGDGLLSSPGARMQQSNACDDYSASHNMQNIAGNIASVAPLDY | Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
Subcellular locations: Nucleus
Expressed in roots, culms, leaves and young panicles. |
AROF_ORYSJ | Oryza sativa subsp. japonica | MSLATSSSMAGGAAVVPRSATATTASAFVTMKRRATAVRAVHAAEPSKNPPVGVPSAAKTSSPSVAAPEKAPVAAAPAPVAPAPAATKQVAPARWAVDSWRTKKALQLPEYPNAAELEAVLKTIEAFPPIVFAGEARHLEERLADAAMGRAFLLQGGDCAESFKEFNGNNIRDTFRVLLQMSAVLTFGGQMPVIKVGRMAGQFAKPRSEAFEERDGVKLPSYRGDNINGDAFNEKSRIPDPQRMVRAYAQSAATLNLLRAFATGGYAAMQRVTQWNLDFTQHSEQGDRYRELAHRVDEALGFMSAAGLTVDHPLMTSTDFWTSHECLLLPYEQSLTRQDSTTGHFYDCSAHMLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMNPTELVKLIEILNPSNKPGRITIITRMGAENMRVKLPHLIRAVRHAGQIVTWITDPMHGNTIKAPCGLKTRPFDSIAEVRAFFDVHDQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLGDRYHTHCDPRLNASQSLELSFIIAERLRRKRIRSSKLNNMLPLPPFGV | Subcellular locations: Plastid, Chloroplast |
AROF_SOLLC | Solanum lycopersicum | MALSNTLSLSSSKSLVQSHLLHNPTPQPRFSLFPTTQHGRRHPISAVHAAEPSKTAVKQGKWSLDSWKTKKALQLPEYPDEKELESVLKTLEMNPPLVFAGEARSLEEKLGEAALGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMSVVLMFGGQVPVIKVGRMAGQFAKPRSDPFEEINGVKLPSYKGDNINGDTFDEKSRIPDPHRLIRAYMQSAATLNLLRAFATGGYAAMQRVTEWNLDFVENSEQGDRYQELAHRVDEALGFMAAAGLTVDHPIMSTTDFWTSHECLLLPYEQALTREDSTSGLFYDCSAHMVWVGERTRQLDGAHVEFLRGVANPLGIKVSQKMDPKELIKLIDILNPANKPGRITVIVRMGAENMRVKLSHLVRAVRGAGQIVTWVCDPMHGNTIKAPCGLKTRAFDSIQAEVRAFFDVHEQEGSHPWCIHLEMTGQNVTECIGGSRTVTYDDLGSRYHTHCDPRLNASQSLELSFIVAERLRRRRMSSQRL | May be involved in the synthesis of secondary metabolites derived from intermediates of the pre-chorismate pathway up to shikimate.
Subcellular locations: Plastid, Chloroplast
Higher levels seen in the cotyledons than in the leaves and flowers. Lower levels seen in the roots and stems. |
AROF_SOLTU | Solanum tuberosum | MALSSTSTTNSLLPNRSLVQNQPLLPSPLKNAFFSNNSTKTVRFVQPISAVHSSDSNKIPIVSDKPSKSSPPAATATTAPAPAVTKTEWAVDSWKSKKALQLPEYPNQEELRSVLKTIDEFPPIVFAGEARSLEERLGEAAMGRAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAVLMFGGQMPVIKVGRMAGQFAKPRSDSFEEKDGVKLPSYRGDNVNGDAFDVKSRTPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRINQWNLDFTEHSEQGDRYRELASRVDEALGFMTAAGLTMDHPIMKTTEFWTSHECLLLPYEQSLTRRDSTSGLYYDCSAHFLWVGERTRQLDGAHVEFLRGIANPLGIKVSDKMDPSALVKLIEILNPQNKAGRITIITRMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHDQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELSFIIAERLRKRRLGSQSV | Subcellular locations: Plastid, Chloroplast |
ATG5_ORYSI | Oryza sativa subsp. indica | MAAQRDDEAGWSAEAARRVWGGAVPLQVHLHDADVTTLPPPPPFLTLGPRIGYLPLLVPIIKAHFSSTLPPGIDTVWFEYKGLPLKWYIPIGVLYDLLCADPERPWNLTVHFRGYPSEILTPCDGEDSVKWSYMNSLKEAAFIITGNSKNVMNMSQADQGALWQSVMKGNLDGYMNISTRLKLGPFEEDCLVRTSSVEGQQGSDEPESPGSGKPCRVPVRLYVRSVQEDLYDLEDALPVGDWESISYINRPFEVRREEGRSYITLEHALKTLLPEFFSSKASRIPDDSETAPQAPDSAPNDDSDVTPRSCEKLESSASSSPQEANVANKGKIVKLVRVQGIEVDMDIPFLWVANNLKNPECYLHICVYVGTRKREPKDGR | Required for autophagy. Conjugation to ATG12 is essential for plant nutrient recycling (By similarity).
Subcellular locations: Cytoplasm |
ATG5_ORYSJ | Oryza sativa subsp. japonica | MAAQRDDEAGWSAEAARRVWGGAVPLQVHLHDADVTTLPPPPPFLTLGPRIGYLPLLVPIIKAHFSSTLPPGIDTVWFEYKGLPLKWYIPIGVLYDLLCADPERPWNLTVHFRGYPSEILTLCDGEDSVKWSYMNSLKEAAFIITGNSKNVMNMSQADQGALWQSVMKGNLDGYMNISTRLKLGPFEEDCLVRTSSVEGQQGSDEPESPGSGKPCRVPVRLYVRSVQEDLYDLEDALPVGDWESISYINRPFEVRREEGRSYITLEHALKTLLPEFFSSKASRIPDDSETAPQAPDSAPNDDSDVTPRSCEKLESSASSSPQEANVANKGKIVKLVRVQGIEVDMDIPFLWVANNLKNPECYLHICVYVGTRKREPKDGR | Required for autophagy. Conjugation to ATG12 is essential for plant nutrient recycling (By similarity).
Subcellular locations: Cytoplasm |
ATPA_SOLBU | Solanum bulbocastanum | MVTIRADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVVNALAKPIDGRGEISASEFRLIESAAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIGQKASSVAQVVTTLQERGAMEYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSSLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNSGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEVGQVRKFLVELRTYLKTTKPQFQEIISSTKTFTEEAEALLKEAIQEQMDRFILQEQA | Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
Subcellular locations: Plastid, Chloroplast thylakoid membrane |
ATPA_SOLLC | Solanum lycopersicum | MVTIRADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVVNALAKPIDGRGEISASEFRLIESAAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIGQKASSVAQVVTTLQERGAMEYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSSLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNSGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEVGQVRKFLVELRTYLKTTKPQFQEIISSTKTFTEEAEALLKEAIQEQMDRFILQEQA | Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
Subcellular locations: Plastid, Chloroplast thylakoid membrane |
ATPA_SOLTU | Solanum tuberosum | MVTIRADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVVNALAKPIDGRGEISASEFRLIESAAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIGQKASSVAQVVTTLQERGAMEYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSSLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNSGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEVGQVRKFLVELRTYLKTTKPQFQEIISSTKTFTEEAEALLKEAIQEQMDRFILQEQA | Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
Subcellular locations: Plastid, Chloroplast thylakoid membrane |
ATPA_SORBI | Sorghum bicolor | MATLRVDEINKILRERIEQYNRKVGIENIGRVVQVGDGIARIIGLGEIMSGELVEFAEGTRGIALNLESKNVGIVLMGDGLMIQEGSFVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEIVASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQKGQDVICVYVAIGQRASSVAQVVTTFHEEGAMEYTIVVAEMADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELQAFAQFASALDKTSQNQLARGRRLRELLKQSQSNPLPVEEQVATIYTGTRGYLDSLEIEQVKKFLDELRKHLKDTKPQFQEIISSSKTFTEQAETLLKEAIQEQLERFSLQEQT | Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
Subcellular locations: Plastid, Chloroplast thylakoid membrane |
ATPA_SOYBN | Glycine max | MVTIRADEISKIIRERIEQYNTEVKIVNTGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESKNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIGQKASSVAQVVNTLQERGAMEYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFAQFSSDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIITIYTGTNGYLDSLEIGQVRKFLVELRAYLNTNKPQFKEIISSTKTFTGEAEVLLKEAIQEQMELFLLQEQVEKN | Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
Subcellular locations: Plastid, Chloroplast thylakoid membrane |
ATPA_SPIOL | Spinacia oleracea | MATIRADEISKIIRERIEGYNREVKVVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEITASESRLIESPAPGIMSRRSVYEPLQTGLIAIDAMIPVGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIGQKASSVAQVVTNFQERGAMEYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSLLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQPQSAPLTVEEQVMTIYTGTNGYLDSLELDQVRKYLVELRTYVKTNKPEFQEIISSTKTFTEEAEALLKEAIQEQMERFLLQEQA | Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
Subcellular locations: Plastid, Chloroplast thylakoid membrane |
ATPB_ORYNI | Oryza nivara | MRTNPTTSRPGVSTIEEKSTGRIDQIIGPVLDVTFPPGKLPYIYNALVVKSRDTDGKQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNLEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFQLILSGELDGLPEQAFYLVGNIDEASTKAINLEEENKLKK | Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
Subcellular locations: Plastid, Chloroplast thylakoid membrane |
ATPB_ORYSA | Oryza sativa | MRTNPTTSRPGVSTIEEKSTGRIDQIIGPVLDVTFPPGKLPYIYNALVVKSRDTDGKQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNLEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFQLILSGELDGLPEQAFYLVGNIDEASTKAINLEEENKLKK | Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
Subcellular locations: Plastid, Chloroplast thylakoid membrane |
ATPB_ORYSI | Oryza sativa subsp. indica | MRTNPTTSRPGVSTIEEKSTGRIDQIIGPVLDVTFPPGKLPYIYNALVVKSRDTDGKQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNLEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFQLILSGELDGLPEQAFYLVGNIDEASTKAINLEEENKLKK | Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
Subcellular locations: Plastid, Chloroplast thylakoid membrane |
ATPB_ORYSJ | Oryza sativa subsp. japonica | MRTNPTTSRPGVSTIEEKSTGRIDQIIGPVLDVTFPPGKLPYIYNALVVKSRDTDGKQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNLEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFQLILSGELDGLPEQAFYLVGNIDEASTKAINLEEENKLKK | Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
Subcellular locations: Plastid, Chloroplast thylakoid membrane |
ATPB_WHEAT | Triticum aestivum | MRTNPTTSPPGASTIEEKSTGRIDQIIGPVLDVTFPPGKLPYIYNALVVQSRDTDDKQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIASTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVALAETIRGFQLILSGELDGLPEQAFYLVGNIDEASTKAITLEEENKSQK | Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
Subcellular locations: Plastid, Chloroplast thylakoid membrane |
ATPF_HORVU | Hordeum vulgare | MKNVTHSFVFLAHWPSAGSFGLNTDILATNLINLTVVVGVLIFFGKGVLKDLLDNRKQRILSTIRNSEELRRGTIEQLEKARIRLQKVELEADEYRMNGYSEIEREKANLINATSISLEQLEKSKNETLYFEKQRAMNQVRQRVFQQAVQGALGTLNSCLNTELHFRTIRANIGILGSLEWKR | F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0).
Subcellular locations: Plastid, Chloroplast thylakoid membrane |
ATPF_PEA | Pisum sativum | MQNITDGSFGFDTDILATNLINLSAVLGVLIFFGKGVLSDLLDNRKQRILRTIRNSEELRETAIEQLEKARARLRKVEMEADRFRVNGYAEIEREKLNLINSIYTSLEQFENDKNKTIHFEQQRAINQVQQSVLQQALQGALGTLNSCLNNELHLRTIGATIGMFGSMKAKK | F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0).
Subcellular locations: Plastid, Chloroplast thylakoid membrane |
ATPF_PHAVU | Phaseolus vulgaris | MKNITDSFLCLGSWPSAGSFVFNTDILATNPINLSVVLGVLVFFGKGVLSDLLDNRKQKIWRTIQNSEELQEEAIEQLEKAQARLRKVETEADRFRVNGYSEIKREKLNLIHSIYTTLEQLENYKNEAIDFEQQRVINQVRQRVLQQALQGALGTLNSCLNNELHLRTVSANIGMFGTMKEKNN | F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0).
Subcellular locations: Plastid, Chloroplast thylakoid membrane |
ATPI_HORVU | Hordeum vulgare | MNIIPCSIKTLKGLYDISGVEVGQHFYWQIGGFQIHAQVLITSWVVITILLGSVVIAVRNPQTIPTDGQNFFEYVLEFIRDLSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIELPHGELAAPTNDINTTVALALLTSAAYFYAGLSKKGLSYFEKYIKPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVIPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH | Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.
Subcellular locations: Plastid, Chloroplast thylakoid membrane |
ATPI_LACSA | Lactuca sativa | MNVLSCSINTLNGLYDISGVEVGQHFYWKIGGFQVHGQVLITSWVVIAILLASATLAVRNPQTIPTSGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPSVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH | Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.
Subcellular locations: Plastid, Chloroplast thylakoid membrane |
AVLA1_WHEAT | Triticum aestivum | MKTMFLLALLAFTATSAVAQLYTTCSQGYGQCQQQPQPQPQPQPQMNTCAAFLQQCSQTPHVQTQMWQASGCQLVRQQCCQPLAQISEQARCQAVCSVAQIIMRQQQGQSFGQPQQQVPVEIMRMVLQTLPLMCRVNIPQYCTTTPCSTITPAIYSIPMTATCAGGAC | Seed storage protein. Not integrated in the gluten polymer through disulfide bonds, unless incorporated by reduction and reoxidation during dough making. Increases dough strength and bread volume, but decreases dough stability when added into a base wheat flour (By similarity). |
AVLA2_WHEAT | Triticum aestivum | MKTMFLLALLAFTATSAVAQLYTTCSQGYGQCQQQPQPQPQPQPQMNTCAAFLQQCIQTPYVQSQMWQASGCQLMRQQCCQPLAQISEQARCQAVCSVSQIIMRQQQGQRFGQPQQQQGQSFGQPQQQVPVEIMRMVLQTLPSMCSVNIPQYCTTTPCSTITPAIYSIPMTATCAGGAC | Seed storage protein. Not integrated in the gluten polymer through disulfide bonds, unless incorporated by reduction and reoxidation during dough making. Increases dough strength and bread volume, but decreases dough stability when added into a base wheat flour (By similarity). |
AVLA3_WHEAT | Triticum aestivum | MKTMFLLALLAFTATSAVAQLYTTCSQGYGQCQQQPQPQPQMNTCAAFLQQCIQTPYVQSQMWQASGCQLMRQQCCQPLAQISEQARCQAVCSVSQIIMRQQQGQRFGQPQQQQGQSFGQPQQQVPVEIMRMVLQTLPSMCSVNIPQYCTTTPCSTITPAIYSIPMTATCAGGAC | Seed storage protein. Not integrated in the gluten polymer through disulfide bonds, unless incorporated by reduction and reoxidation during dough making. Increases dough strength and bread volume, but decreases dough stability when added into a base wheat flour (By similarity). |
AVLA4_WHEAT | Triticum aestivum | MKTMFILALIALAATSVVAQLDTTCSQGYGQCQQQPQQQVNTCSALLQQCSPTPYVQSQMWQASGCQLMRQQCCQPLAQISEQARCQAVCSVAQVIMRQQQGQSFGQPQQQVQSFSQPQHQVPIEITRMVLQTLPSMCNVNIPQYCTTTPCRTITQTPYNIPMSATCVGGTC | Seed storage protein. Not integrated in the gluten polymer through disulfide bonds, unless incorporated by reduction and reoxidation during dough making. Increases dough strength and bread volume, but decreases dough stability when added into a base wheat flour (By similarity). |
AVLA5_WHEAT | Triticum aestivum | MKTMLILALIALAATSVVAQLDTTCSQGYGQCQQQPQQQVNTCSALLQQCSPTPYVQSQMWQASGCQLMRQQCCQPLAQISEQARCHAVCGVAQVIMRQQQGQSFGQPQQQQGQSFSQPQQQVPIEIRRMVLQTLPSMCNVNIPQYCTTTPCSTITQTPYNVPMATTCVGGTC | Seed storage protein. Not integrated in the gluten polymer through disulfide bonds, unless incorporated by reduction and reoxidation during dough making. Increases dough strength and bread volume, but decreases dough stability when added into a base wheat flour. |
AVLA6_WHEAT | Triticum aestivum | MKNLFILALLAFTATSAVAQLYTTCSQGYGQCQQQPQPQPQPQPQPQMNTCSAFLQQCSQTAYVQSQMWQASGCQLMRQQCCQPLAQISEQARCQAVCSVAQIIMRQQQGQRFGQPQQQQGQSFSQPQQQVPVEIMGMVLQTLPSMCSVNIPQYCTTTPCSTIAPAIYNIPMTATCAGGAC | Seed storage protein. Not integrated in the gluten polymer through disulfide bonds, unless incorporated by reduction and reoxidation during dough making. Increases dough strength and bread volume, but decreases dough stability when added into a base wheat flour (By similarity). |
AVLA7_WHEAT | Triticum aestivum | MKTMFILALLAFTATSAVAQLYTTCSQGYGQCQQQPQPQPQMNTCSAFLQQCIQTPYVQSQMWQASSCQLMRQQCCQPLAQISEQARCQAVCSVSQIIMRQQQGQRFGQPQQQQGQSFSQPQQQVPVEIMRMVLQTLPSMCSVNIPQYCTTTPCSTITPAIYSIPMTATCAGGAC | Seed storage protein. Not integrated in the gluten polymer through disulfide bonds, unless incorporated by reduction and reoxidation during dough making. Increases dough strength and bread volume, but decreases dough stability when added into a base wheat flour (By similarity). |
AVLB1_WHEAT | Triticum aestivum | MKVFILALLALTATTAIAQLETTCSQGFGQYQQQQQPGQRQLLEQMKPCVAFLQQQCRPLRMPFLQTQVEQLSSCQIVQHQCCQQLAQIPERIRCHAIHSVVEAIMQQQSQQQWQERQQQAQHKSMRMLLENLSLMCNIYVPVQCQQQQQMGQQQQQQQLQEQLTPCATFLQHQCSPVTVPFPQIPVDQPTSCQNVQHQCCRQLSQIPEQFRCQAIHNVAEAIRQQQPQQQWQGMYQPQQPAQHESIRMSLQALRSMCNIYIPVQCPAPTAYNIPMVATCTSGAC | Seed storage protein. Might be integrated via inter-chain disulfide bonds within the glutenin polymer. |
AVLB2_WHEAT | Triticum aestivum | MKVFILALLALTATTAIAQLETTCSQGFGQSQQQQQPGQRQLLEQMKPCVAFLQQKCSPLRMPFLQTQVEQLSSCQIVQYQCCQQLAQIPERTRCHAIHIVVEAIIQQQSQQQWQEPQQQAQHKSMRMLLENLSLMCNIYVPVQCQQQQQMGQQPQQQQLQEQLTPCATFLQHQCSPVTVPFPQIPVDQPTSCQNVQHQCCRQLSQIPEQFRCQAIHNVAEAIRQQQPQQQWQGMYQPQQPAQHESIRMSLQALRSMCNIYIPVQCPAPTAYNIPMVATCTSGAC | Seed storage protein. Might be integrated via inter-chain disulfide bonds within the glutenin polymer (By similarity). |
AVLB3_WHEAT | Triticum aestivum | MKVFILALLALTATTAIAQLETTCSQGFGQSQQQQQPGQRQLLEQMKPCVAFLQQKCSPLRMPFLQTQVEQLSSCQIVQYQCCQQLAQIPERTRCHAIHIVVEAIIQQQSQQQWQEPQQQAQHKSMRMLLENLSLMCNIYVPVQCQQQQQLGQQQQQQLQEQLTPCTTFLQQQCSPVTVPFPQIPVDQPTSCQNVQHQCCRQLSQIPEQFRCQAIHNVAEAIRQQQPQQQWQGMYQPQQPAQLESIRMSLQALRSMCNIYIPVQCPAPTTYNIPLVATYTGGAC | Seed storage protein. Might be integrated via inter-chain disulfide bonds within the glutenin polymer (By similarity). |
AVLB4_WHEAT | Triticum aestivum | MKVFILALLALTATTAIAQLETTCSQGFRQYQQQQQPGQRQLLEQMRPCVAFLQQQCRPLRMPFLQTQVEQLSSCQIVQYQCCQQLAQIPEQIRCHAIHNVVEAIMQQQSQQQRQERQQQAQHKSMRMLLENLSLMCNIYVPIQCQQQQQLGQQQQQQLQEQLTPCATFLQHQCSPVTVPFPQIPVDQPTSCQNVQHQCCRQLSQIPEQFRCQAIHNVAEAIRQQQPQQQWQGMYQPQQPAQLESIRMSLQALRSMCSIYIPVQCPAPTAYNIPMVATYTGGAC | Seed storage protein. Might be integrated via inter-chain disulfide bonds within the glutenin polymer (By similarity). |
BAS1_SPIOL | Spinacia oleracea | MACVASSTTLISSPSSRVFPAKSSLSSPSVSFLRTLSSPSASASLRSGFARRSSLSSTSRRSFAVKAQADDLPLVGNKAPDFEAEAVFDQEFIKVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRHSEFEKLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLISDVTKSISKSFGVLIHDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETMRTLQALQYTGNPDEVCPAGWKPGEKSMKPDPKLSKEYFSAI | Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. May be an antioxidant enzyme particularly in the developing shoot and photosynthesizing leaf.
Subcellular locations: Plastid, Chloroplast |
BAS1_WHEAT | Triticum aestivum | DARARSFVARAAAEYDLPLVGNKAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRHEEFEKINTEILGVSVDSVFSHLAWVQTERKSGGLGDLKYPLVSDVTKSISKSFGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETLRTLRALQYVKKPDEVCPAGWKPGEKSMKPDPKGSKEYFAAI | Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. May be an antioxidant enzyme particularly in the developing shoot and photosynthesizing leaf.
Subcellular locations: Plastid, Chloroplast |
BCL1_ORYSI | Oryza sativa subsp. indica | MADFSPHHSLLLKATAAGAAIATTNDPNISSFFLYNHSHGSQAPQPANAAAAAIVEDASLESSVSAVLDTSPSVDRKRKAAEDSAHSKDSCKDGKSRRGKKASKEVEEKSTTEDEPPKGYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASMSPVLYGFGMDSDGLHDQKIGGMFQEALAMPNPVLNQSSPAPSQAIMDTTSTTSYSLQSQHGAISFSQDNGSYLMQAVGEPRQQEMLNQLVFNNMCSFQ | Together with BCL2, positive regulator of cell elongation at least partially through increased gibberellic acid (GA) biosynthesis.
Subcellular locations: Nucleus |
BCL1_ORYSJ | Oryza sativa subsp. japonica | MADFSPHHSLLLKATAAGAAIATTNDPNISSFFLYNHSHGSQAPQPANAAAAAIVEDASLESSVSAVLDTSPSVDRKRKAAEDSAHSKDSCKDGKSRRGKKASKEVEEKSTTEDEPPKGYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASMSPVLYGFGMDSDGLHDQKIGGMFQEALAMPNPVLNQSSPAPSQAIMDTTSTTSYSLQSQHGAISFSQDNGSYLMQAVGEPRQQEMLNQLVFNNMCSFQ | Together with BCL2, positive regulator of cell elongation at least partially through increased gibberellic acid (GA) biosynthesis.
Subcellular locations: Nucleus
Mostly expressed in panicles and stems and, at low levels, in leaves, lamina joints and roots. |
BGA14_ORYSJ | Oryza sativa subsp. japonica | MAKAMCSLGACLAVMLVVLAAAVAGVGCSIVSYDGRSLILDGERRIVISGSIHYPRSTPEMWPDLIKKAKEGGLNAIETYVFWNGHEPRRREFNFEGNYDVVRFFKEIQNAGMYAILRIGPYICGEWNYGGLPVWLRDIPGIKFRLHNKPFENGMEAFTTLIVKKMKDANMFAGQGGPIILAQIENEYGYTMLQPENIQSAHEYIHWCADMANKQNVGVPWIMCQQDNDVPPNVVNTCNGFYCHEWFSNRTSIPKMWTENWTGWYRDWDQPEFRRPTEDIAFAVAMFFQMRGSLQNYYMYHGGTNFGRTAGGPYITTSYDYDAPLDEYGNLRQPKYGHLKELHSVLMSMEKILLHGDYIDTNYGDNVTVTKYTLNATSACFINNRFDDRDVNVTLDGTTHFLPAWSVSILPNCKTVAFNSAKIKTQTTVMVNKTSMVEQQTEHFKWSWMPENLRPFMTDEKGNFRKNELLEQIVTTTDQSDYLWYRTSLEHKGEGSYVLYVNTTGHELYAFVNGKLVGQQYSPNENFTFQLKSPNYGGSFELLPAGIVGGPVKLIDSSGSAIDLSNNSWSYKAGLAGEYRKIYLDKPGNKWRSHNSTIPINRPFTWYKTTFQAPAGEDSVVVDLHGLNKGVAWVNGNSLGRYWPSYVAADMPGCHHCDYRGVFKAEVEAQKCLTGCGEPSQQLYHVPRSFLNKGEPNTLILFEEAGGDPSEVAVRTVVEGSVCASAEVGDTVTLSCGAHGRTISSVDVASFGVARGRCGSYDGGCESKVAYDAFAAACVGKESCTVLVTDAFANAGCVSGVLTVQATC | Subcellular locations: Secreted, Extracellular space, Apoplast |
BGA15_ORYSJ | Oryza sativa subsp. japonica | MAASRGPPLLGFRALALALLLAILLLLGCSAAAAYAGAEGVLRQVVGRRGDDGGGGNFFEPFNVTYDHRAVLIGGKRRMLVSAGLHYPRATPEMWPSLIAKCKEGGADVIETYVFWNGHEPAKGQYYFEERFDLVKFAKLVAAEGLFLFLRIGPYACAEWNFGGFPVWLRDIPGIEFRTDNEPFKAEMQTFVTKIVTLMKEEKLYSWQGGPIILQQIENEYGNIQGNYGQAGKRYMQWAAQMAIGLDTGIPWVMCRQTDAPEEIIDTCNAFYCDGFKPNSYNKPTIWTEDWDGWYADWGGALPHRPAEDSAFAVARFYQRGGSLQNYYMYFGGTNFARTAGGPLQITSYDYDAPIDEYGILRQPKWGHLKDLHTAIKLCEPALIAVDGSPQYIKLGSMQEAHVYSTGEVHTNGSMAGNAQICSAFLANIDEHKYASVWIFGKSYSLPPWSVSILPDCENVAFNTARIGAQTSVFTVESGSPSRSSRHKPSILSLTSGGPYLSSTWWTSKETIGTWGGNNFAVQGILEHLNVTKDISDYLWYTTRVNISDADVAFWSSKGVLPSLTIDKIRDVARVFVNGKLAGSQVGHWVSLKQPIQLVEGLNELTLLSEIVGLQNYGAFLEKDGAGFRGQVTLTGLSDGDVDLTNSLWTYQVGLKGEFSMIYAPEKQGCAGWSRMQKDSVQPFTWYKTMFSTPKGTDPVAIDLGSMGKGQAWVNGHLIGRYWSLVAPESGCSSSCYYPGAYNERKCQSNCGMPTQNWYHIPREWLKESDNLLVLFEETGGDPSLISLEAHYAKTVCSRISENYYPPLSAWSHLSSGRASVNAATPELRLQCDDGHVISEITFASYGTPSGGCLNFSKGNCHASSTLDLVTEACVGNTKCAISVSNDVFGDPCRGVLKDLAVEAKCSPPSTTKEPRGEM | Subcellular locations: Secreted, Extracellular space, Apoplast |
BGAL1_ORYSJ | Oryza sativa subsp. japonica | MMGRRGSSWCRWWVALLVLAVAADAVGCTSVSYDDRSLVIDGQRRIILSGSIHYPRSTPEMWPDLIKKAKEGGLDAIETYIFWNGHEPHRRQYNFEGNYDVVRFFKEIQNAGMYAILRIGPYICGEWNYGGLPAWLRDIPGMQFRLHNEPFENEMETFTTLIVNKMKDSKMFAEQGGPIILAQIENEYGNIMGKLNNNQSASEYIHWCADMANKQNVGVPWIMCQQDDDVPHNVVNTCNGFYCHDWFPNRTGIPKIWTENWTGWFKAWDKPDFHRSAEDIAFAVAMFFQKRGSLQNYYMYHGGTNFGRTSGGPYITTSYDYDAPLDEYGNLRQPKYGHLKELHSVLKSMEKTLVHGEYFDTNYGDNITVTKYTLDSSSACFINNRFDDKDVNVTLDGATHLLPAWSVSILPDCKTVAFNSAKIKTQTSVMVKKPNTAEQEQESLKWSWMPENLSPFMTDEKGNFRKNELLEQIVTSTDQSDYLWYRTSLNHKGEGSYKLYVNTTGHELYAFVNGKLIGKNHSADGDFVFQLESPVKLHDGKNYISLLSATVGLKNYGPSFEKMPTGIVGGPVKLIDSNGTAIDLSNSSWSYKAGLASEYRQIHLDKPGYKWNGNNGTIPINRPFTWYKATFEAPSGEDAVVVDLLGLNKGVAWVNGNNLGRYWPSYTAAEMAGCHRCDYRGAFQAEGDGTRCLTGCGEPSQRYYHVPRSFLAAGEPNTLLLFEEAGGDPSGVALRTVVPGAVCTSGEAGDAVTLSCGGGHAVSSVDVASFGVGRGRCGGYEGGCESKAAYEAFTAACVGKESCTVEITGAFAGAGCLSGVLTVQATC | Subcellular locations: Secreted, Extracellular space, Apoplast |
BGAL_SOLLC | Solanum lycopersicum | MGFWMAMLLMLLLCLWVSCGIASVSYDHKAIIVNGQRKILISGSIHYPRSTPEMWPDLIQKAKEGGVDVIQTYVFWNGHEPEEGKYYFEERYDLVKFIKVVQEAGLYVHLRIGPYACAEWNFGGFPVWLKYVPGISFRTNNEPFKAAMQKFTTKIVDMMKAEKLYETQGGPIILSQIENEYGPMEWELGEPGKVYSEWAAKMAVDLGTGVPWIMCKQDDVPDPIINTCNGFYCDYFTPNKANKPKMWTEAWTAWFTEFGGPVPYRPAEDMAFAVARFIQTGGSFINYYMYHGGTNFGRTSGGPFIATSYDYDAPLDEFGSLRQPKWGHLKDLHRAIKLCEPALVSVDPTVTSLGNYQEARVFKSESGACAAFLANYNQHSFAKVAFGNMHYNLPPWSISILPDCKNTVYNTARVGAQSAQMKMTPVSRGFSWESFNEDAASHEDDTFTVVGLLEQINITRDVSDYLWYMTDIEIDPTEGFLNSGNWPWLTVFSAGHALHVFVNGQLAGTVYGSLENPKLTFSNGINLRAGVNKISLLSIAVGLPNVGPHFETWNAGVLGPVSLNGLNEGTRDLTWQKWFYKVGLKGEALSLHSLSGSPSVEWVEGSLVAQKQPLSWYKTTFNAPDGNEPLALDMNTMGKGQVWINGQSLGRHWPAYKSSGSCSVCNYTGWFDEKKCLTNCGEGSQRWYHVPRSWLYPTGNLLVVFEEWGGDPYGITLVKREIGSVCADIYEWQPQLLNWQRLVSGKFDRPLRPKAHLKCAPGQKISSIKFASFGTPEGVCGNFQQGSCHAPRSYDAFKKNCVGKESCSVQVTPENFGGDPCRNVLKKLSVEAICS | Involved in cell wall degradation. Degrades polysaccharides containing beta-(1-->4)-linked galactans, acting as an exo-(1-->4)-beta-D-galactanase. |
BGL38_ORYSJ | Oryza sativa subsp. japonica | MNMPLLLLIAIVVVSLSHGNGEQTDLTRETFPAGFVFGTASSAYQVEGNALQYGRGPCIWDTFLMQPGVTPDNSTANVTVDEYHRYMDDVDNMVRVGFDAYRFSISWSRIFPSGLGKINKDGVDYYHRLIDYMLANNIIPYVVLYHYDLPQVLHDQYKGWLHPRIVRDFVRFADFCFKTYGHKVKNWFTINEPRMMANHGYGDGFFPPGRCTGCQPGGNSATEPYIAAHNLLLSHAAAVRTYRDKYQAIQKGKIGILLDFVWYEPLTDKEEDHAAAHRAREFTLGWYLHPITYGHYPETMQNAVKERLPNFTREQSEMIKGSADYIAINHYTTYYVSHHVNKTSISYLNDWDVKISYERNGVPIGKQAYSNWLYVVPWGIYKAVMHVKEKYKDPIIIIGENGIDQPGNETLPGALYDFFRIQYFDQYLHELKRAIKDGARVTGYFAWSLLDNFEWRLGFTSKFGIVYVDRSTFTRYPKDSTRWFRKMIKSEV | null |
BH062_ORYSJ | Oryza sativa subsp. japonica | MVPRDRVNAAAAGGGGEGRLVQSGIVNKKCDKKAPKRIHKSEREKLKRDKQNDLFNELGNLLEPDRQNNGKACVLGETTRILKDLLSQVESLRKENSSLKNESHYVALERNELHDDNSMLRTEILELQNELRTRMEGNPVWSHVNTRPALRVPYPTTGVFPVQHLPHLPVTTTAAFPQQLPVIIEQHYAATPRELQLFPESATSEDSEPSQEHGISDHVTRPQPRYPTPTATLPVNLFPVFPGRQDQQCSSGTSGTNEEDRIGRS | Transcription factor that plays a positive role in salt stress tolerance. Interacts with TIFY11A/JAZ9 and binds to the promoter of some potassium ion transporter genes to regulate potassium homeostasis during salt stress.
Subcellular locations: Nucleus |
BIP3_MAIZE | Zea mays | MDRVRGSAFLLGVLLAGSLFAFSVAKEETKKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPERTIFDVKRLIGRKFQDKEVQRDMKLVPYKIINKDGKPYIQVKIKDGENKVFSPEEISAMILGKMKDTAEAYLGKKINDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKYSKDISKDNRALGKLRREAERAKRALSNQHQVRVEIESLFDGTDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKSQIHEIVLVGGSTRIPKVQQLLKDYFNGKEPNKGVNPDEAVAFGAAVQGSILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSMTKDCRLLGKFDLNGIPSAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNEKGRLSQEEIDRMVREAEEFAEEDKKVKERIDARNQLETYVYNMKNTVGDKDKLADKLEAEEKEKVEEALKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIVSAVYQRSGGAPGGDADGGVDDDHDEL | Probably plays a role in facilitating the assembly of multimeric protein complexes inside the ER.
Subcellular locations: Endoplasmic reticulum lumen |
BIP3_ORYSJ | Oryza sativa subsp. japonica | MARGATWTRRLHLHGLFLAVLLLLTLPAGSTAAAGGGGGTVIGIDLGTTYSCVGVYRNGHVEIIANDQGNRITPSWVAFTGGGERLIGEAAKNQAAANPGRTVYDAKRLIGRRFADAEVQRDMRLLPFAVVDKGGKPHVRVEVRGGDVRLLSPEEVSAMVLARMKETAEAYLGEEVTRAVVTVPAYFNDAQRQATKDAATIAGLAVERILNEPTAAALAYGVGKEGAGGKNVLVFDLGGGTFDVSVLAIDGGVYEVLATNGDTHLGGEDFDQRVMEHFVELVRRKHGRDIAGDARALGKLRRECERAKRALSIQHQVRVEVESLFDGVDLSEPLSRARFEELNNDLFRKTMAPVRKAMADARLSNADIDEIVLVGGSTRIPKVRQLLRDYFGGKQPNQGVNPDEAVAYGAAIQANIVGGDTDNKTRDMVVLDVTPLTLGLETAGGVMATLIPRNTPVPTKRAQLFSTYKDKQTTVTVKVFEGERSMTRDNRLLGRFDLAGIAPAPRGAPQIEVAFEVDADGILSVSAADRATGRSERITISGDDRKTSREEIDRMLGEAEEFADEDRRHRERAGARNSLEAYVYGVKNAVVGGEMAGAMDGGEKEKVEAAVMEAYEWLDGNQDVGKEEYEEKLRELEDVCNPVMSAVYQRSGGSRRDGDGGGDDDHDEL | Functions as a chaperone during endoplasmic reticulum (ER) stress response.
Subcellular locations: Endoplasmic reticulum |
BIP4_ORYSJ | Oryza sativa subsp. japonica | MARPRRASTATTMQLGLLLAALLLFTSSLAGSVAAAAPPPPAGAKGGGAKSGGGGGTVIGIDLGTTYSCVGVYRNDRVEIIANDQGNRITPSWVAFTDGGERLIGEAAKNQAAANPERTIYDAKRLIGRQFSDAEVQRDMKLLPFAVVDRNGKPHVRVEVKDGDVRVFSPEEVSAMVLTRMKETAEAYLGEKVTRAVVTVPAYFNDAQRQATKDAGVIAGLTVDRIINEPTAAAIAYGIDKKGAEKNVLVFDLGGGTFDVSILAIDNGVFEVLATNGDTHLGGEDFDQRLMDHFVKVIRRKHGRDIAGDARALGKLRRECERAKRALSNQHQVRVEIESLFDGVDFSEPLSRARFEELNGDLFKKTMVPVRKAMADAGLGKGDIDEIVLVGGSTRIPKVQQLLKDYFGGKEPNRGVNPDEAVAYGAAVQASIISGHVDENTESMILLDVAPLTLGLETAGGVMTKLIPRNTVVPTKKTQVFTTYKDRQTTVTIQVFEGERSMTRDNRLLGKFDLTGIAPAPRGAPQIAVTFEVDANGILSVLAADKATGRSEKITISGDDRKISQEEIDRMVREAEEFADEDRRHREQVDARNSLEAYVYNVKSTLGGKMADAMEGEEKEKVEEAVREAHEWLDGNPDAGKEEYEEKLRELEDVCNPVMSAVYQRSGGGGGAPEDGNVDDEDDHDEL | Functions as a chaperone during endoplasmic reticulum (ER) stress response.
Subcellular locations: Endoplasmic reticulum |
BIP5_ORYSJ | Oryza sativa subsp. japonica | MARPRRASTMQLGLFLAALLLLTPSPAGSVAAAKGGGAKSGGGGTVIGIDLGTTYSCVGVYRNGHVEIIANDQGNRITPSWVAFTDGGERLIGEAAKNQAAANPERTIYDAKRLIGRQFSDAEVQRDMKLLPFAVVDRNGKPHVRVEVKDGDVRVFSPEEVSAMVLTRMKETAEAYLGEKVTRAVVTVPAYFNDAQRQATKDAGVIAGLTVDRIINEPTAAAIAYGIDKKGAEKNVLVFDLGGGTFDVSILAIDNGVFEVLATNGDTHLGGEDFDQRLMDHFVKVIRRKHGRDITGDARALGKLRRECERAKRALSNQHQVRVEVESLFDGVDLSEPLSRARFEELNSDLFKKTMVPVRKAMADARLSKGDIDEIVLVGGSTRIPKVQQLLKDYFGGKEPNRGVNPDEAVAYGAAVQASIISGHVDENTESMILLDVAPLTLGLETAGGVMAKLIPRNTVVPTKKTQVFTTYKDKQTTVTIQVFEGERSMTRDNRLLGRFDLAGIAPAPRGAPQIEVTFEVDANGILSVLAADKATGRSEKITISGDDRKISQEEIDRMVREAEEFAEEDRRHREQVDARNSLEAYVYNIKNTLGGKMADAMEGEEKDKVEEAVREAYEWLDGNPDAGKEEYEEKLRELEDVCNPVMSAVYQRSGGGGGGAPEDGNVDDEDDHDEL | Functions as a chaperone during endoplasmic reticulum (ER) stress response.
Subcellular locations: Endoplasmic reticulum |
BQMT1_ORYSJ | Oryza sativa subsp. japonica | MKEMVSSSTFRAPGGLGFLGPSKIGLIPLRNRSGVRSRVKYIAPKCAVSSARPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPAELYHHGLKVVDVGGGTGFTTLGIVKHVDNENVTLLDQSPHQLEKARQKVALNGVNIIEGDAEDLPYPTDTFDRYVSAGSIEYWPDPQRGIREAYRVLKLGGVACLIGPVHPTFWLSRFFADMWMLFPKEEEYIEWFQKAGFQDVKIKRIGPKWYRGVRRHGLIMGCSVTGVKRSSGDSPLQLGPKAEDVEKPVNPFTFIFRFVMGTICASYYVLVPIYMWMKDQIVPKDQPI | Involved in a key methylation step in both tocopherols (vitamin E) and plastoquinone synthesis. Catalyzes the conversion of 2-methyl-6-phytyl-1,4-hydroquinone (MPBQ) to 2,3-dimethyl-6-phytyl-1,4-hydroquinone (DMPQ, a substrate for tocopherol cyclase), and 2-methyl-6-solanyl-1,4-benzoquinone (MSBQ) to plastoquinone (By similarity).
Subcellular locations: Plastid, Chloroplast inner membrane |
BQMT2_ORYSJ | Oryza sativa subsp. japonica | MAMASSAYAPAGGVGTHSAPGRIRPPRGLGFSTTTTKSRPLVLTRRGGGGGNISVARLRCAASSSSAAARPMSQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLYSRKLRVVDVGGGTGFTTLGIVKRVDPENVTLLDQSPHQLEKAREKEALKGVTIMEGDAEDLPFPTDTFDRYVSAGSIEYWPDPQRGIKEAYRVLRLGGVACMIGPVHPTFWLSRFFADMWMLFPKEEEYIEWFKKAGFKDVKLKRIGPKWYRGVRRHGLIMGCSVTGVKREHGDSPLQLGPKVEDVSKPVNPITFLFRFLMGTICAAYYVLVPIYMWIKDQIVPKGMPI | Involved in a key methylation step in both tocopherols (vitamin E) and plastoquinone synthesis. Catalyzes the conversion of 2-methyl-6-phytyl-1,4-hydroquinone (MPBQ) to 2,3-dimethyl-6-phytyl-1,4-hydroquinone (DMPQ, a substrate for tocopherol cyclase), and 2-methyl-6-solanyl-1,4-benzoquinone (MSBQ) to plastoquinone (By similarity).
Subcellular locations: Plastid, Chloroplast inner membrane |
C3H19_ORYSJ | Oryza sativa subsp. japonica | MDSAVRPPVDAEEARRRRSTDCIYFLASPLTCKKGSECEYRHSDAARMNPRDCWYWFNGNCANPKCSFRHPPLDGLVGAPTTPRTSQQSAPQVSVPAQAPVPNPASGTAKQGVPCYYFQKGMCVKGDRCAFLHLPQATGSPAPQHTTKVFAPASVPHPQLKNSWTKPNSSAQQNAPPAIFDKPKDSAHNGKTAQKQNLTNRAGHSSGIIHDKKGSYMPSGVTKNYRPPPSTGDDLAENGVEMGEFVREPSPGSDVLTGGADDNTEQSLREDRGAYRRTNGEQHIGMLRQTHDSYGFERSHRGSAEKLLSESRFSQREPMPLTADSSDLRQRLLKQRRLNNPRSGQVSDRHNVYPEDERHDRHRQRGEEQASNDGVSSSRLRGRIRLPAETTFDRLGLQPEKERDRGPRARLSPPSQTDLRGKLHDRLKAKPNEDVSGNVQSSLSKANEDAESLNFAGPKSLAELKAKKVAGSLMKSSRSLTGPVRMTSEIVTIKDSSDPVLFDGPKPLNAILKRKREADSGNATDFGSKREEHSGGDEEGSQNDFRNIEDDIVGMNTEGNGEEAFQPEDDVVYGDSLSPADDIAAEAADDASRELEEQQDVETAEEYDYEMDDVNAAEENDYQEYEDEDDDLEDDDDFARKVGVMIT | null |
C3H1_ORYSJ | Oryza sativa subsp. japonica | MAGRGGMVEWEVGRRRDSEDVIVLSPGPPARRRPPPVKAVEPESGGFAYEPPEKLFYKTRVCETFVTSGRCMFEDGCTFAHGDEELRPSLTACAGGWRKPSPSLSAAAPPVAVAPTPPPAQVVHELLARGSGSGGGGHRAITKVCFEFRDKGICYFGETCAFPHVSAAEIRQGSRLSSMSSSSWEMPARRSVAVTVPRTFVSVPPVAPPPPPPHYRVNNSSSYNAASMAAAAPAASDANLVAQQPPPEQGGRKMTRLEMLSLKKMTGIYGDWLEGYEHP | null |
C3H20_ORYSJ | Oryza sativa subsp. japonica | MLSLSERAPICSPQSAPSASASDTCKMEENMNQQKTLEADISNTSVNQSPQSKILPESSPDNQDAEHEYRSPPPISESKELSPQSRTTPGSSPDNQDTEREYPSPPPISGSKEISPQSRTILESSPDNQDNGHEYPSPPPIPESIELSPHSKALPESSPDNQDIEPECPSPPQIPESKELSRQSKILPESSPGNQDIEPECPSPPQIPESKELSQQSKILPESSPDNHDIKCEYSSPTPIPESKELSLQSKILPESSSDNQDIKCEDPSPTPISKSKEVSPQSKILSESYLDNQDVERECPSSILITESKELAVDLPGSISLAPEKTASTDVGENSSLAFIFPKSTLAGDDALKSVFDMAKAHLECEDSKVKEELYVESTVVIRDDMVVNPASGVESIDMSENLLESLMEQSCGTFYMDGTTALEGFLSGSTKEEPQCSSPIALSTCSSPIALSPWGEHGYYQGDSVGSSLWGVQDDDPIGNIWPLSSQAPALQYSSGSTAHFIDEATVTHGNNGVVLSSTPGEEVGLPNSGVCTDWGLVEQVNPETNDASVSMIDKNSGLVDSQPSANDGSDVGTARNTNHNTNLSLNHETAVPLSRSSGEASRKHGFITDLNVATSEEALGNTKNWNPYAGNANRGSQRNHHRDRYSQISESWLLSSNYSRSRSDGFGTGGSSRSTPRGQTQRGICKFHENGYCRKGASCNYLHP | null |
C3H21_ORYSJ | Oryza sativa subsp. japonica | MKLGISGGAGEAMEGELSFVSPARSSCFSFEGGGSGSPTWVSTVEALLRSPTSSVSDGGGGGGGGYNSPARASSPLQKQIPYCRDAGDFSSLTWASTLEKPLESPSSCISDGRGGGFGSPTSAFPPEKLLISPPTCVSDNRGVGNVGGFPSLPWASSLERLLTSPSSCVSDSRGVGNADGFPSLPWASSLEKPLTSPSSCVSDGRSGGYSSPLGASAEREREVREAEMLLRAIAERYDDCFLRLRDAAAELSDLHRERLRLAAENLHLSLLLEELESEQRKQASAMAPPKLEEDEAAQGGAPKSISIRSPGYLSQKPPQGQARPQRLRVRASQAMEISHPNCLIFVMGNQCSPKEAAAAGDEEDEEDKGGGEVEVEAYRQGAAKTELCNKWERGACPYGARCRFAHGLQELRPVIRHPRYKTLPCQMFAAASGCPYGHRCHFRHSPLRAAAAESFCY | null |
C3H22_ORYSJ | Oryza sativa subsp. japonica | MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKELALLPPPPPPSSSSPTVPAAHSPFLLSRQNSGRGPAPSPSPLSASSPSSWAQAQPFSRSNGSVDEVVGAGEELISPANSGGGAAANAPPFFPRGGDVLLDDFQLQEQLAFLNEGGVNPSHPLQGFDGAECRSPGPGEGGGMFPYGLGWANGGPGHRRSASVNELCLGGGSSDGFGWKPCLYYARGFCKNGSSCRFVHGDDAAALTGAAMDAATAEQQQCQDFLLRSKSQRLGPAAFPYSPTGSLPGSPSAATKCLSLLLQQQHNDNQRAAAAAALMLGGSDEAHKFMGRPRLDRVDFASMMNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKYRKHQGDFSGCTTPTGLDGRDPFDLHQLGARMLQHSNSTNEMMLRRKLEEQQQAAELQQAIELHSRRLMDLQLLDLKNRAAAAVTTAMAMTIPTANAFGSSQPLATTMVESPPDSGEQLKGTGYFTEERKMVNGGGDKEESAGEASLNADSDQSLEHNLPDSPFASPTKSSVSAHQSFTTTDTGVVATSSCSASHVGISAGTNAGGGINHLRPSTLDIPSPRDFFSVSSRLASDHGAIGM | null |
C3H23_ORYSJ | Oryza sativa subsp. japonica | MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKELALLPPPQAASSSPTVPAAHSPFLLSRQNSGRCPAPSPSSWAQAQPFSRSNSMGNGGAADEMVGAGEELMSPLNGGGGAAANAPPFFPRGGDALLDDFELQEQLAFLHDGAGGVNPGHALQAFDGAECRSPGPGESGGMLPYGLAWANGGPGHRRSASVNELCLGGDGFGWKPCLYYARGFCKNGSTCRFVHGGLSDDAAMDATTAEQQQCQDFLLRSKSQRLGPAAFPFTPTGSLPASPSATSKCLSLLLQQQQQHNDNQRAAAAALMLAGGDEAHKFMGRPRLDRVDFASMMNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKYRKQQQGDFCCMSPTGLDARDPFDFHQLGARMLQHSNSANELMLRRKLEEQQQAAELQQAIDLHSRRLIGLQLLDLKSSAAVHAAETTTMSLPTPITNAFTSGQPGATTIVESPPSSTGQLMASCGSPSEGKVVNGGNKADSAGEVTRNADSDQSGEHNLPDSPFASSTKSTAFFTATAATAIGSEGDFTTGSSCNIGGSAVGSANPLRPPTLDIPSPRTCFFPMPRLSEHGAIGM | null |
C3H24_ORYSJ | Oryza sativa subsp. japonica | MFLLMASVLPIRQAPMNGTPISASAAAGVDGVGAAVALAAATKKSAAAAAAVAEMAKTLTVDTDDAFAGLLELAADDDAEGLRRALERAPPAAADEAGLWYGRRKVLEHRTPLMVAATYGSLAVLRLLLSLPSVDVNRRCGSDGTTALHCAASGGSPSCVEAVKLLLAAGADADATDASGYRPADVISVPPKMFDAKIALQDLLGCPKAGHGVLRVVTRAANSMLSPVSSPTAEDARSPSAAVMMTTKFADLPRVVTSEKKEYPVDPSLPDIKNSIYASDEFRMYSFKIRPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPDFRKGVCRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTTDELRPLYVSTGSAVPSPRASATATMEMAAAMGLMPGSPSSVSAVMSPFTPPMSPSGNGMPPSLGWQQPNVPTLHLPGSSLQSSRLRTSLSARDMPADDYSLMQDIDSQLINDLCYSRIGSSTGNHTSRTKSLNPSNLDDLFSAEMVSSPRYSNADQGGMFSPSHKAAFLNQFQQQQQALLSPINTVFSPKSVDNQQLPSHSSLLQASLGISSPGRMSPRCVESGSPMNSHLAAALAQREKQQQTMRSLSSRDLGPSAARASGVVGSPLSSSWSKWGSPSGTPDWGVNGEELGKLRRSSSFELRSGGDDPDLSWVHTLVKESPPEKQVTTAESINSVGPSPLMPPSVSNGEGPSLNAPLDGHDQAAVIGALLEQMQLDQHIGSLAT | null |
C3H25_ORYSJ | Oryza sativa subsp. japonica | MNPLTQVKRTQVINQKEALLGIGEDGSWHAKFKDSAYVFVGGIPYDLTEGDLLAVFAQYGEVVDVNLVRDKGTGKSKGFAFLAYEDQRSTILAVDNLNGAKVLGRIVRVDHVSKYKKKEEEDEEELQKKREARGVCYAFQKGECNRGASCRYSHDEQRNANTGWGSKEESKARWEHDRHHEPPMSHKKFPSSAGEQRFPDRAKEENKSTGREGQSSRSEAYKDRDSRLRHSDRGSKDHDRYRHDRSPERSRGDRQRNNDRYAQGRDEKSERYRSEVKHDEGDQKRSRRDTDSSGHYERRGNEDSERYRKSRR | null |
C3H27_ORYSJ | Oryza sativa subsp. japonica | MIKESSSPALDADKIEVPSPKDENNSSNSEAATDNEDFEISDDDDDDRNHKHRKREARPQSFDENTEQSPGGPLKKRHKISGGADSHGEAQKDFFPKFKRRPGAGAHSRAPRVNPSFRDSSASVAARAPMTRGRGRNGAPWAQHEPRFNTLEMIDFASQMASQGPPTHPSLFMGPALPSGGSAQNGSWGPYGFMPGMPNGMLDPIHPLGMQGPIQPAISPLIDLGMPRQRCRDFEERGFCLRGDMCPMEHGLNRIVVEDMQSLSQFNLPVTVPNTQGLGIQNEPGTAPVNTSSLGGSKGVPAKDIKSAVTNDVLKLNGTTALAVSDADVYDPDQPLWNNEHPDASAGFAHTDGVWNAESLGYEAAREQGNQVLAADSSQNSKSSVWGRIASKKLGHGKTANATSTSATGNKRNESYDEMAPSTVHVNPASAKDSNGQSNSRIFGDVGRQSNRASHKASRTLYVNGIPLESNRWEALLSHFQKFGQVIDIYIPSNSEKAFVQFSKREEAEAALKAPDAVMGNRFIKLWWANRDRIPDEVEGRIPAKSSHMSAALANSVPQPSSSNRGKENLQSATPRASSGSSAEASGPGTGHKMLPANSVKSLPPDTKRQESLELLEELRKKQEILAQKRDEFRRQLEKLAKQKGLANSAKQAEAGGKEVASNDVHRVTDSKSMNTGTEGPRDAAGTLQNRTSGELASSSHKSSATSAQKPAVATKQTSPLLVPSQNRFKLDNRTTSFRILPPLPPEIADESVLKDHFMSFGELSSVVLEDTEAYNHDATLKPSLSCSACVTYTTRQSAEKAFIGGKSCKGHTLRFMWLTASPGSTNHSRFQKTSIPARASSFSSQTQNMPSESSTTVGKMSSTVKSSTTAKPHSESMPTATSAKTSVEIPKALSSRDSDVSQ | null |
C3H28_ORYSJ | Oryza sativa subsp. japonica | MASAETPNPDAEIPNTDAAAAADPAAAAPAAAATDPAAAGSPSPPLPPRKRRLSPTPSPTRRSSRSRSRSPRRGRSRSRSRSRSRGRSASPRYPDGKRRRHNDLNVEVCRDFLRDRCARADIECKYAHPHPTVAVDRDSKVTACADSLRNNCFRGRTCRYYHPPPHIQESLLRSIGVEDPKVKMQVCRDFTRGRCSRSANECRFLHHSPLEDCAIVCQDFLRGRCDRKSCRYSHVMAHPMPPPMRDIPMQYPDMVYMPPPAPLGVPMMMPPPSAPAAFSGNNYGVEVCRDYLKNMCNRESCRFAHPDLNNEVMNTQVEVCRDFKRGECNRPACRFYHPPASSNSIG | null |
C85A1_ORYSJ | Oryza sativa subsp. japonica | MVLVAIGVVVAAAVVVSSLLLRWNEVRYSRKRGLPPGTMGWPLFGETTEFLKQGPSFMKARRLRYGSVFRTHILGCPTVVCMEAELNRRALASEGRGFVPGYPQSMLDILGRNNIAAVQGPLHRAMRGAMLSLVRPAMIRSSLLPKIDAFMRSHLAAWSSSSSSAVVDIQAKTKEMALLSALRQIAGVSAGPLSDALKAELYTLVLGTISLPINLPGTNYYQGFKARKKLVAMLEQMIAERRSSGQVHDDMLDALLTGVEGTREKLTDEQIIDLIITLIYSGYETMSTTSMMAVKYLSDHPKALEQLRKEHFDIRKGKAPEDAIDWNDFKSMTFTRAVIFETLRLATVVNGLLRKTTQDVEMNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLEKNMESHPHFMLFGGGSRMCPGKEVGTVEIATFLHYFVTQYRWEEEGNNTILKFPRVEAPNGLHIRVQDY | Catalyzes the C6-oxidation step in brassinosteroids biosynthesis (, ). May convert 6-deoxoteasterone (6-deoxoTE) to teasterone (TE), 3-dehydro-6-deoxoteasterone (6-deoxo3DT, 6-deoxo3DHT) to 3-dehydroteasterone (3DT, 3-DHT), and 6-deoxotyphasterol (6-deoxoTY) to typhasterol (TY) (, ). Involved in the organization and elongation of the leaf and stem cells (, ). Not able to convert 6-deoxocastasterone (6-deoxoCS) and castasterone (CS) to brassinolide (BL) .
Subcellular locations: Membrane
Expressed at low levels in all the tissues, but preferentially in the leaf sheath. |
C85A1_SOLLC | Solanum lycopersicum | MAFFLIFLSSFFGLCIFCTALLRWNQVKYNQKNLPPGTMGWPLFGETTEFLKLGPSFMKNQRARYGSFFKSHILGCPTIVSMDSELNRYILVNEAKGLVPGYPQSMIDILGKCNIAAVNGSAHKYMRGALLSLISPTMIRDQLLPKIDEFMRSHLTNWDNKVIDIQEKTNKMAFLSSLKQIAGIESTSLAQEFMSEFFNLVLGTLSLPINLPNTNYHRGFQARKIIVNLLRTLIEERRASKEIQHDMLGYLMNEEATRFKLTDDEMIDLIITILYSGYETVSTTSMMAVKYLHDHPKVLEELRKEHMAIREKKKPEDPIDYNDYRSMRFTRAVILETSRLATIVNGVLRKTTQDMEINGYIIPKGWRIYVYTRELNYDPRLYPDPYSFNPWRWMDKSLEHQNSFLVFGGGTRQCPGKELGVAEISTFLHYFVTKYRWEEIGGDKLMKFPRVEAPNGLRIRVSAH | Catalyzes the C6-oxidation step in brassinosteroids biosynthesis . Converts 6-deoxocastasterone (6-deoxoCS) to castasterone (CS) (, ). May also convert 6-deoxoteasterone (6-deoxoTE) to teasterone (TE), 3-dehydro-6-deoxoteasterone (6-deoxo3DT, 6-deoxo3DHT) to 3-dehydroteasterone (3DT, 3-DHT), and 6-deoxotyphasterol (6-deoxoTY) to typhasterol (TY), but not castasterone (CS) to brassinolide (BL) .
Subcellular locations: Membrane
Expressed in sub-meristematic regions of shoot and root apexes, in zones undergoing lateral root formation, in fruits, and in all flower parts, with a high expression in young flower buds and at the joint in the pedicel. |
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GreenBeing Proteins dataset
Proteins from UniProtKB (knowledge base), from select food crops and related species.
Amino acid sequences use IUPAC-IUB codes where letters A-Z map to amino acids.
Usage (due to different schema on splits):
load_dataset("monsoon-nlp/greenbeing-proteins", "pretraining", split="pretraining")
XML source from https://www.uniprot.org/help/downloads
CoLab notebook: https://colab.research.google.com/drive/1M6sO0Ws6i5z9VUXIXopiOqo1OkQ7K-1g?usp=sharing
Pretraining split
Amino acid sequences for unreviewed proteins (TrEMBL)
Each row contains a species or subspecies name (for filtering), and the amino acid sequence of a protein. Large proteins are split into a new row every 8,000 letters.
Share of taxa
In the pretraining split:
- 31% Papilionoideae/Faboideae (soybeans, peas, pulses, peanuts)
- 19% Triticeae (wheat, barley, rye, and relatives)
- 17% Oryzeae (rice, wild rice, and relatives)
- 12% Paniceae (most millets)
- 6% Solanum (potatoes, tomatoes, other nightshades, etc.)
- 5% Zea (corn/maize)
- 2% Sorghum
- 2% Lactuca sativa (lettuce)
- 2% Capsicum (chili peppers)
- 2% Cucurbita (squash, pumpkins)
- 0.8% Spinacia
- 0.7% Asparagus
- 0.2% Beta vulgaris (beet)
- 0.1% Bambusa (includes edible bamboo shoots)
Finetuning split
Reviewed proteins (Swiss-Prot) from above taxa. Each row contains a gene name, species or subspecies, an amino acid sequence, and comments / annotations available in UniProt.
A gene name may match multiple entries on UniProt from different accessions.
Annotations may be empty, or may include information such as:
- likely function, written in English
- location inside of cell (e.g. "Subcellular locations: Vacuole")
- locations in the plant (e.g. "Expressed in roots, stems")
Removed PubMed reference numbers to avoid training models to hallucinate PubMed references.
In the current state of plant genomics research, about half of the finetuning split are from rice and related species, a fifth are from Papilionoideae/Faboideae, and seven taxa have less than 1% each.
Research split
Proteins from quinoa (~99%), cañihua, and the three species of amaranth which are currently grown for grain.
Columns contain UniProt/TrEMBL gene names, species, and the amino acid sequence. Large proteins are split into a new row every 8,000 letters.
Limitations and Safety Notes
Proteins and review status on UniProt are from March 29, 2024.
You should at least pretrain on more than Oryza sativa, because its reviewed proteins are probably some of the most common/important.
Understanding reviewed/unreviewed proteins: https://www.uniprot.org/help/uniprotkb_sections
The reviewed sequences are often similar to unreviewed sequences from related species and accessions, and are not suitable to test predicting/infilling/completion.
Species include inedible wild relatives.
Some people have allergic reactions to wheat/gluten, nightshades, maize, and other crops.
Chili peppers can be painfully spicy.
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Size of downloaded dataset files:
1.56 GB
Size of the auto-converted Parquet files:
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Number of rows:
3,949,068
Models trained or fine-tuned on monsoon-nlp/greenbeing-proteins