Patent Publication Number: US-10760090-B2

Title: Papaver somniferum strain with high concentration of thebaine

Description:
CROSS-REFERENCE TO RELATED APPLICATIONS 
     This application is a continuation of U.S. patent application Ser. No. 14/816,639, filed Aug. 3, 2015, which is a Divisional application of U.S. patent application Ser. No. 12/398,245, filed Mar. 5, 2009 (issued on Sep. 15, 2015 as U.S. Pat. No. 9,131,649), which claims priority to U.S. Provisional Application Ser. No. 61/034,583, filed Mar. 7, 2008, 61/088,903, filed Aug. 14, 2008, and 61/089,163, filed Aug. 15, 2008, the contents of each of which are hereby incorporated by reference in their entireties. 
    
    
     FIELD OF THE INVENTION 
     The present invention is directed to the improved production of thebaine. More particularly, the present invention relates to the use of a mutagenized  Papaver somniferum  poppy plant to produce thebaine in higher yield. 
     BACKGROUND OF THE INVENTION 
     The 14-hydroxymorphinans, such as, oxycodone, naloxone, naltrexone, naltrexone methobromide, nalbuphine and nalmefene are important opiate derivatives due to their behavior as potent analgesics and/or narcotic antagonists. The most practical synthetic routes to the preparation of these pharmaceuticals have utilized the alkaloid, thebaine, as a starting material. Other important opiate derivatives such as hydrocodone and the ring-C bridged compounds buprenorphine and etorphine are also most practically prepared from thebaine. 
     
       
         
         
             
             
         
       
     
     In accordance with one conventional process, thebaine is oxidized to 14-hydroxycodeinone by use of m-chloroperbenzoic acid in an acetic acid/trifluoroacetic acid mixture or by a mixture of hydrogen peroxide and formic acid. 14-hydroxycodeinone is catalytically reduced to oxycodone. See Scheme 1. Oxycodone is a product sold for use as an analgesic and its production consumes large amounts of thebaine. 
     
       
         
         
             
             
         
       
     
     Oxycodone can be, in turn, O-demethylated with boron tribromide to yield oxymorphone. After blocking of the hydroxyl groups with a suitable blocking agent, such as, acetyl groups, the oxymorphone derivative can be reacted with cyanogen bromide in a von Braun demethylation to yield an N-cyanodihydronormorphinone derivative that is thereafter hydrolyzed to 14-hydroxydihydronormorphinone (noroxymorphone). Noroxymorphone can be readily converted to nal-compounds by N-alkylation with appropriate alkyl halide, or acylation with appropriate acyl halide or anhydride, followed by reduction. Another process, converts the oxycodone of the above process to noroxycodone by the von Braun N-demethylation followed by conversion to a 3-O-methyl-nal-compound using N-alkylation with an appropriate alkyl halide, or by alkylation with an appropriate alkyl halide, or acylation with appropriate acyl halide or anhydride, followed by reduction. The 3-O-methyl-nal-compound is converted to a nal-compound by O-demethylation. 
     A synthesis using thebaine to produce the ring-C bridged opiate, buprenorphine, is shown in Scheme 2. 
     
       
         
         
             
             
         
       
     
     Another synthesis using thebaine to produce the 14-hydroxymorphinan, naltrexone as representative of the nal-compounds, is shown in Scheme 3. 
     
       
         
         
             
             
         
       
     
     Another synthesis uses thebaine to produce hydrocodone as set forth in U.S. Pat. No. 3,812,132. 
     Although these syntheses are effective, the availability of thebaine is limited by its high cost. The high cost of thebaine contributes to the high cost of the 14-hydroxymorphinans derived from it. 
     One reason for the limited availability of thebaine, and its high cost, is that total synthesis is difficult. U.S. Pat. Nos. 4,613,668 and 4,795,813 discuss the scarcity of thebaine and teach the total synthesis, or alternative synthesis, of the 14-hydroxymorphinans. Yet, the demand for thebaine remains. 
     A second reason for the limited availability of thebaine, and its high cost, is that the primary source of thebaine is extraction from the poppy plant,  Papaver somniferum . Morphine is the major alkaloid that accumulates in capsules of  Papaver somniferum . Thus, the supply of thebaine is to a great degree limited to some fraction of the demand for morphine. 
     Alkaloids are extracted from the poppy capsules of  Papaver somniferum  by two commercial methods. In one method, the immature capsule is cut and the latex collected from the wound. The air-dried latex is opium which, according to the Merck Index, 11th edition, contains alkaloids in the amounts shown in Table I. In a second method, the mature poppy capsules and the poppy capsule stems are collected, and threshed to remove the seeds and form a straw. When necessary, the straw is dried to a water content below 16%. Solvent or water extraction is employed to remove the alkaloids from the straw. For the varieties of  Papaver somniferum  normally grown, the straw, on a dry basis, contains alkaloids in the amounts shown in Table 1. 
     
       
         
           
               
               
               
             
               
                   
                 TABLE 1 
               
               
                   
                   
               
               
                   
                 opium 
                 straw 
               
               
                   
                   
               
             
            
               
                   
               
            
           
           
               
               
               
               
            
               
                   
                 morphine, % 
                 10-16 
                 1-3 
               
               
                   
                 codeine, % 
                 0.8-2.5 
                 0.05-0.3  
               
               
                   
                 oripavine, % 
                     0-0.1 
                   0-0.05 
               
               
                   
                 thebaine, % 
                 0.5-2     
                 0.15-0.65 
               
               
                   
                   
               
            
           
         
       
     
     As can be seen, the yield of thebaine and oripavine is confounded with that of other alkaloids. A poppy producing predominantly thebaine, e.g., as 90% or more of the total alkaloids, would enable a simpler extraction/purification process, resulting in higher yields, better quality and throughput and lower costs. 
     Where solvent or water or super critical fluid, such as CO 2 , extraction is employed to remove the alkaloids from the straw, such method, as practiced, involves the production of “Concentrate of Poppy Straw”. Concentrate of Poppy Straw (or “CPS”) is described as “The material arising when poppy straw has entered into a process for the concentration of its alkaloids, when such material is made available in trade,” (Multilingual dictionary of narcotic drugs and psychotropic substances under international control, United Nations, N.Y., 1983). Not inconsistent with the foregoing description, Concentrate of Poppy Straw is described as “the crude extract of poppy straw in either liquid, solid or powder form which contains the phenanthrene alkaloids of the opium poppy,” 45 U. S. Federal Register 77466, Nov. 24, 1980. When in liquid form, the liquid is preferably concentrated before entering into commerce. The generally preferred Concentrate of Poppy Straw is the powder form which results from removing the solvent or water following extraction of the poppy straw. According to the United Nations publication “ Narcotic Drugs: Estimated World Requirements for  2007 ; Statistics for  2005 (E/INCB/2006/2)”, Concentrate of Poppy Straw is the dried residue obtained through the extraction of alkaloids from poppy straw. Until the second half of the 1990s, only concentrate of poppy straw containing morphine as the main alkaloid was manufactured. Since then, concentrate of poppy straw containing mainly thebaine or oripavine has started to be manufactured. 
     More recently, first et al., in U.S. Pat. No. 6,067,749 (the “&#39;749 Patent”), U.S. Pat. Nos. 6,376,221 and 6,723,894, disclosed an improved poppy straw of a stably reproducing  Papaver somniferum  for the extraction of thebaine and/or oripavine (the “Norman” poppy), the threshed straw having thebaine and oripavine constituting about 50% by weight or greater of the alkaloid combination consisting of morphine, codeine, thebaine and oripavine. The Norman poppy straw constituted 1.68% thebaine, 0.74% oripavine, 0.05% codeine and no morphine as a percent by weight of the dry straw. (See, column 15, table III of the &#39;749 Patent). While this alleviated the limited availability and high cost of thebaine to some extent, the problem of producing oripavine concurrently with thebaine contributed significantly to the cost of producing thebaine. 
     For many years, the perennial poppy  Papaver bracteatum  has been proposed as a source of thebaine. Thebaine is the predominant alkaloid in this species, and in selected strains it can be as high as 98% of the total alkaloids (Palevitch, D and Levy, A 1992 Acta Horticulturae 306, 33-52). Thebaine is present in the roots as well as capsules. Generally two years of growth would be required to obtain a good yield of both roots and capsules.  Papaver bracteatum  does not alleviate the problem of limited availability and high cost of thebaine because of its slow growth, low capsule yield and the problems with harvesting and processing roots. 
     SUMMARY OF THE INVENTION 
     The present invention is directed to a poppy straw comprising a poppy straw of a stably reproducing  Papaver somniferum  having thebaine constituting about 90% (preferably, about 95%, more preferably, about 97%) by weight or greater of an alkaloid combination, and having oripavine constituting about 10% (preferably, about 5%, more preferably, about 1%, most preferably, about 0.7%) by weight or less of the alkaloid combination, wherein the alkaloid combination comprises morphine, codeine, thebaine and oripavine; and wherein thebaine constitutes about 3.0% or greater of the poppy straw on a dry weight basis. In a preferred embodiment, thebaine constitutes about 3.5% or greater (preferably, about 4.0% or greater, more preferably, about 4.3% or greater) of the poppy straw on a dry weight basis. In another embodiment, oripavine constitutes about 0.4% or lower (preferably, about 0.2% or lower) of the poppy straw on a dry weight basis. In another embodiment of the invention, oripavine constitutes between 0.01 to 1.0% (preferably, between 0.02% to 0.5%) by weight of the alkaloid combination in the poppy straw. 
     There is also provided by the present invention a stably reproducing  Papaver somniferum  having two genetic traits controlling the thebaine-only characteristic of the plant, one trait being that described in U.S. Pat. No. 6,067,749, and the second trait regulating the step between thebaine and oripavine, resulting in substantially no oripavine. In an embodiment of the present invention is a  Papaver somniferum  plant having a high thebaine content of over 3% (preferably, over 3.5%, more preferably, over 4.0%, most preferably, over 4.3%) in the straw wherein the high thebaine content is provided by two independent traits, one trait controlling the accumulation of thebaine and oripavine compared with morphine and codeine, and the second trait controlling the accumulation of thebaine compared with oripavine. In still another embodiment of the invention is a  Papaver somniferum  plant having a high thebaine content of over 3% (preferably, over 3.5%, more preferably, over 4.0%, most preferably, over 4.3%) in the straw on a dry weight basis wherein the high thebaine content is provided by two independent genetic changes, one genetic change controlling the accumulation of thebaine and oripavine compared with morphine and codeine, and the second genetic change controlling the accumulation of thebaine compared with oripavine. 
     There is also provided by the present invention a method to improve the thebaine yield of a stably reproducing  Papaver somniferum  plant, the method comprising the steps of: 
     a) exposing at least one poppy seed of  Papaver somniferum  to a mutagenizing agent, 
     b) growing at least one poppy seed to produce a plant bearing a leaf or an immature poppy capsule, optionally through multiple self-fertilized generations, 
     c) sampling the leaf or poppy capsule (or any other latex-containing tissue) for the presence of thebaine, oripavine, morphine and codeine, 
     d) repeating steps a) to c) until a poppy plant of  Papaver somniferum  is obtained having thebaine constituting about 90% (preferably, about 95%) by weight or greater, and having oripavine constituting about 10% (preferably, about 5%, more preferably, about 1%) by weight or less, of the alkaloid combination, wherein the alkaloid combination comprises morphine, codeine, thebaine and oripavine; and 
     e) collect the seed from the plant obtained in “d” and grow another generation of plants to ensure that the subsequent generation stably re-produces the high thebaine and low oripavine characteristic. In an embodiment of this method, in step d) the poppy plant obtained has thebaine constituting about 3.0% (preferably, about 3.5%, more preferably, about 4.0%, most preferably, about 4.3%) or greater of the poppy straw, on a dry weight basis, and oripavine constituting about 0.4% (preferably, about 0.2%) or lower of the poppy straw, on a dry weight basis. 
     There is also provided by the present invention a stably reproducing  Papaver somniferum  plant or a stand of a stably reproducing  Papaver somniferum  plants, in which the production or activity of the enzyme responsible for the conversion of thebaine to oripavine has been substantially inhibited with the result that upon the harvesting of their poppy capsules, the poppy plants will yield a poppy straw having thebaine constituting about 90% (preferably, about 95%, more preferably, about 97%) by weight or greater of the alkaloid combination, and having oripavine constituting about 10% (preferably, about 5%, more preferably, about 1%) by weight or less of the alkaloid combination, and the poppy plants will yield a poppy straw wherein thebaine constitutes about 3.0% or greater (preferably, about 3.5% or greater, more preferably, about 4.0% or greater, most preferably, about 4.3% or greater) of the poppy straw, on a dry weight basis, and oripavine constitutes about 0.4% or lower (preferably, about 0.2% or lower) of the poppy straw, on a dry weight basis. 
     The present invention also provides a stably reproducing plant of  Papaver somniferum , which upon the harvesting of their poppy capsules will yield a poppy straw having thebaine constituting about 90% (preferably, about 95%, more preferably, about 97%) by weight or greater of an alkaloid combination, and having oripavine constituting about 10% (preferably, about 5%, more preferably, about 1%, most preferably, about 0.7%) by weight or less of the alkaloid combination, wherein the alkaloid combination comprises morphine, codeine, thebaine and oripavine; and wherein thebaine constitutes about 3.0% or greater of the poppy straw on a dry weight basis. The straw of the stably reproducing  Papaver somniferum  plant of the present invention preferably contains thebaine constituting about 3.5% or greater (preferably, about 4.0% or greater, more preferably, about 4.3% or greater) of the poppy straw, on a dry weight basis, and oripavine constituting about 0.4% or lower (preferably, about 0.2% or lower) of the poppy straw, on a dry weight basis. In another embodiment of the invention, oripavine constitutes between 0.01 to 1.0% (preferably, between 0.02% to 0.5%) by weight of the alkaloid combination in the stably reproducing  Papaver somniferum  plant. 
     Also included in the invention is a plant comprising a stably reproducing plant of  Papaver somniferum  which upon the harvesting of its poppy capsules will yield a poppy straw having thebaine constituting at least 3% (preferably, at least 3.5%) by weight on a dry basis, and oripavine constituting no more than 0.4% by weight on a dry basis of said straw. Preferably, thebaine constitutes at least 4.0% by weight on a dry basis, and oripavine constitutes no more than 0.2% by weight on a dry basis of said straw of the plant. 
     The present invention also provides a plant comprising a stably reproducing plant of  Papaver somniferum  which upon the harvesting of its poppy capsules will yield a poppy straw having thebaine constituting at least about 3% (preferably, about 3.5%, more preferably, about 4%, most preferably, about 4.3%) by weight on a dry basis, and oripavine constituting about 0.05 to about 0.5% (preferably, about 0.05 to about 0.2%) by weight on a dry basis of said straw. 
     Also included in the invention is a seed of any of the stably reproducing poppy plants described above; preferably, the seed is a  Papaver somniferum  seed which is ATCC PTA-9109. 
     Also included in the invention is a concentrate of poppy straw for the extraction of thebaine comprising a concentrate of poppy straw of any of the stably reproducing poppy plants described above. 
     Another aspect of the invention is an opium for the extraction of thebaine comprising an opium of any of the stably reproducing poppy plants described above. 
     Still another aspect of the invention is a poppy straw comprising a poppy straw of any of the stably reproducing poppy plants described above. 
     Another embodiment of the invention is a method for the production of thebaine which comprises the steps of: 
     a) harvesting poppy capsules of any of the stably reproducing poppy plants described above to produce a poppy straw; and 
     b) chemically extracting the thebaine from the poppy straw. 
     Still another embodiment of the invention is a method for the production of thebaine which comprises the steps of: 
     a) collecting and drying the latex of the immature poppy capsules of any of the stably reproducing poppy plants described above to produce opium; and 
     b) chemically extracting the thebaine from the opium. 
     Also included in the invention is a stand of any of the stably reproducing  Papaver somniferum  plants described above. 
     The present invention also provides a poppy straw comprising a poppy straw of a stably reproducing  Papaver somniferum  having thebaine constituting at least about 3% (preferably, about 3.5%, more preferably, about 4%, most preferably, about 4.3%) by weight on a dry basis, and oripavine constituting about 0.05 to about 0.5% (preferably, about 0.05 to about 0.2%) by weight on a dry basis of said straw. 
     In the poppy straw, opium, and concentrate of poppy straw of the present invention, thebaine preferably constitutes about 96% by weight or greater of the alkaloid combination and oripavine constitutes about 0.8% by weight or less of the alkaloid combination; more preferably, thebaine constitutes about 97% by weight or greater of the alkaloid combination and oripavine constitutes about 0.7% by weight or less of the alkaloid combination. In the most preferred embodiments of the present invention, there is substantially no oripavine, morphine or codeine in the alkaloid combination. In another embodiment of the instant invention, the alkaloid combination further comprises salutaridine, reticuline, laudanine, papaverine and noscapine. 
     The present invention also provides  Papaver somniferum  plants, and methods for producing such plants, having poppy straw with substantially higher thebaine content, and substantially lower oripavine content, such that thebaine contents in commercially grown and harvested crops are about 3.0% or greater, preferably, about 3.5% or greater, more preferably, 4.0% or greater, most preferably, about 4.3% or greater, and oripavine contents are in the order of about 0.4%, preferably, 0.2%, or lower. 
     Additional embodiments of the present invention provide poppy straw, concentrate of poppy straw and opium, wherein thebaine constitutes about 95% by weight or greater of the alkaloid combination and oripavine constitutes between about 0.01 to about 1.0% by weight (preferably, between about 0.02% to 0.6% by weight, more preferably, between about 0.02% to 0.5% by weight) of the alkaloid combination. 
     Examplifying the invention is a method for producing a poppy plant of  Papaver somniferum  having a stably heritable high thebaine content (that is, the high thebaine content is stably reproducing) and low oripavine content versus morphine and codeine content, the method comprising the steps of:
         a) exposing at least one poppy seed of  Papaver somniferum  to a mutagenizing agent,   b) growing the at least one poppy seed to produce a plant bearing a leaf or an immature poppy capsule, optionally through multiple self-fertilized generations,   c) sampling the leaf or poppy capsule for the presence of thebaine, oripavine, morphine and codeine, and   d) repeating steps b) and c) and optionally step (a) until a poppy plant of  Papaver somniferum  is obtained which yields a poppy straw having thebaine constituting about 90% (preferably, about 95%) by weight or greater of the alkaloid combination consisting of morphine, codeine, thebaine and oripavine, and having oripavine constituting about 10% (preferably, about 5%) by weight or less of the alkaloid combination, and wherein thebaine constitutes about 3.0% (preferably, about 3.5%, more preferably, about 4.0%, most preferably, about 4.3%) or greater of the poppy straw on a dry weight basis.       

     Preferably, the  Papaver somniferum  seed exposed to the mutagenizing agent in step (a) of this method is a  Papaver somniferum  yielding, upon the harvesting of its poppy capsules, a poppy straw having a thebaine and oripavine content constituting 50% by weight or greater of the alkaloid combination consisting of morphine, codeine, thebaine and oripavine. 
     In another embodiment of this method, step (b) comprises growing the at least one poppy seed to produce a plant bearing a leaf or an immature poppy capsule, and self-pollinating to produce seed, and taking the seed thereby produced and producing an M2 generation of plants, and step (c) comprises screening the M2 plants and selecting plants which yield a poppy straw having thebaine constituting about 95% by weight or greater of the alkaloid combination consisting of morphine, codeine, thebaine and oripavine, and having oripavine constituting about 5% by weight or less of the alkaloid combination, each on a dry weight basis, and wherein thebaine constitutes about 3.5% (preferably, about 4.0%, more preferably, about 4.3%) or greater of the poppy straw on a dry weight basis, 
     In another aspect of this method, the  Papaver somniferum  seed exposed to the mutagenizing agent in step (a) of this method is seed selected from ATCC PTA-9110 or ATCC PTA-9109. 
     The present invention is also directed to progeny of  Papaver somniferum  ATCC-9109, said progeny yielding a poppy straw having thebaine constituting about 90% (preferably, about 95%) by weight or greater of an alkaloid combination, and having oripavine constituting about 10% (preferably, about 5%) by weight or less of the alkaloid combination, and wherein thebaine constitutes about 3.0% (preferably, about 3.5%, more preferably, about 4.0%, most preferably, about 4.3%) or greater of the poppy straw on a dry weight basis, wherein the alkaloid combination comprises morphine, codeine, thebaine and oripavine. 
     Another example of the present invention is a mutant or variant of  Papaver somniferum  ATCC PTA-9109 or ATCC PTA-9110, said mutant or variant yielding a poppy straw having thebaine constituting about 90% (preferably, about 95%) by weight or greater of an alkaloid combination, and having oripavine constituting about 10% (preferably, about 5%) by weight or less of the alkaloid combination, each on a dry weight basis, and wherein thebaine constitutes about 3.0% (preferably, about 3.5%, more preferably, about 4.0%, most preferably, about 4.3%) or greater of the poppy straw on a dry weight basis, wherein the alkaloid combination comprises morphine, codeine, thebaine and oripavine. 
    
    
     
       BRIEF DESCRIPTION OF THE FIGURES 
         FIG. 1  provides a chromatogram showing separation of the alkaloids using the isocratic UPLC method. 
         FIG. 2  provides a chromatogram of the poppy straw of the M3 generation of FN1-1242-3. ATA indicates thebaine, ori indicates oripavine peak, AMA represents morphine, and ACA represents codeine. 
     
    
    
     DETAILED DESCRIPTION OF THE INVENTION 
     Utilizing the mutagenized plants of  Papaver somniferum  as described herein, persons skilled in the art easily know how to grow them, reproduce them, collect the latex or the dried straw and purify the thebaine. As one enablement of the present invention, seeds to the mutagenized plants of  Papaver somniferum  (FN1-1242-3), as described herein, have been deposited under the Budapest Treaty with the American Type Culture Collection, 10801 University Boulevard, Manassas, Va. 20110-2209, on Mar. 20, 2008, under ATCC® Patent Deposit Designation PTA-9109. All restrictions on access to these deposits will be irrevocably removed at the time a patent issues in the United States on the basis of this application. The availability of these seeds is not to be construed as a license to practice this invention in contravention of rights granted under the authority of any government in accordance with its patent or breeder&#39;s rights laws. Regardless of the enablement provided by this deposit, persons skilled in the art of mutagenizing seed, can obtain the seed herein by employing the mutagenesis process as described below. 
     The production of mutagenized seed is well known in the art. Methods of seed mutagenesis as well as mutagens suitable for use in these methods, such as ethyl methanesulfonate (EMS), are described in the Manual on Mutation Breeding, 2nd ed., I.A.E.A., Vienna 1977 or in Plant Breeding, Principles and Prospects, Chapman and Hall, London 1993. For X-ray mutagenized seeds, hydrated seeds might be treated with 20,000 rads, (30 cm from the source for 45 minutes using a filter). X-ray mutagenesis is described and compared to EMS mutagenesis by Filippetti, A. et al., “Improvement of Seed Yield in  Vicia Faba  L. By Using Experimental Mutagenesis II Comparison of Gamma-Radiation and Ethyl-Methane-Sulphonate (EMS) in Production of Morphological Mutants”, Euphytica 35 (1986) 49-59. DEB, diepoxybutane, mutagenized seeds might be obtained by soaking the seeds in water overnight, then soaking in 22 mM DEB for 4 hours, followed by extensive washing. Further mutagens include ethyl-2-chloroethyl sulphide, 2-chloroethyl-dimethylamine, ethylene oxide, ethyleneimine, dimethyl sulphonate, diethyl sulphonate, propane sulphone, beta-propiolactone, diazomethane, N-methyl-N-nitrosourethane, acridine orange and sodium azide. 
     Mutagenesis utilizing EMS is well described in the literature. The Manual on Mutation Breeding, supra, reports a preferred EMS mutagenesis process for barley seeds as practiced by K. Mikaelson. In this preferred process, the seeds are prepared, pre-soaked, treated with the mutagen and post-washed. 
     U.S. Pat. No. 6,067,749, incorporated by reference herein in its entirety, describes the use of EMS for the preparation of a  Papaver somniferum  strain with a high concentration of thebaine and oripavine. 
     Irradiation methods such as fast neutron mutagenesis may also be used to produce mutagenized seed. (See, Li, X. et al., A fast neutron deletion mutagenesis-based reverse genetics system for plants, The Plant Journal 27(3), 235-242 (2001)). Applicants employed and prefer fast neutron mutagenesis (“FNM”) as the mutagen herein. 
     Fast neutron mutagenesis is described by Kodym and Afza (2003), Physical and Chemical Mutagenesis, pp 189-203, in Methods in Molecular Biology, vol 236: Plant Functional Genomics: Methods and Protocols (Ed. E. Grotewold), Humana Press Inc, Totowa, N.J. 
     Gamma (γ) Rays are electromagnetic waves of very short wavelengths and are obtained by disintegration of radioisotopes Co or Cs. γ sources can be installed in a γ cell, a γ room, or γ field. These are shielded by lead or concrete. Most γ sources as suitable for seed irradiation, as long as the size of irradiation space is sufficient and the dose rate allows practical irradiation times. 
     Fast neutrons are uncharged particles of high kinetic energy and are generated in nuclear reactors or in accelerators. The scientist should assess the feasibility for seed irradiation with the operators, since not all facilities are suitably equipped and can produce fast neutrons at a low degree of contamination with other radiation. 
     The two radiation types differ in their physical properties and, hence, in their mutagenic activity. γ Rays have a lower relative biological effectiveness (RBE) than fast neutrons, which implies that in order to obtain the same biological effect, a higher dose of γ radiation must be given. RBE is mainly a function of the linear energy transfer (LET), which is the transfer of energy along the ionizing track. γ Rays produce a few ionizations per micron of path (low LET) and belong to the category of sparsely ionizing radiation. Fast neutrons (high LET, densely ionizing radiation) impart some of their high kinetic energy via collisions, largely with protons within the material. 
     When radiation passes through tissue, physical events such as ionizations (ejection of electrons from molecules) and excitations (process of raising electrons to a higher energy state) occur and lead to effects in the DNA, membranes, lipids, enzymes, etc. Secondly, chemical events are induced that start with the formation of activated molecules, so-called free radicals (OH. and H.) that arise from OH− and H+. If oxygen is present, it reacts readily with radiation-induced free radicals to form peroxyradicals. In the case of low LET radiation, the formation of peroxyradicals is favoured. In high LET radiation, the formation of hydrogen peroxide (H 2 O 2 ) by recombination of free radicals is favoured. All radicals and hydrogen peroxide can react with biological molecules. Primary damage caused by radiation occurs randomly and is both physiological and genetic. Physiological recovery and repair of DNA are possible to some extent, as non-damaged molecules may take over metabolic processes and DNA repair mechanisms are activated. 
     Before starting any mutation induction studies, it is most crucial to select suitable doses. For mutation induction, it is advisable to use two to three doses along with a control. The applicable doses will depend on the breeding or research objective, the radiation type and the particular plant material. It is known that plant genera and species and, to a lesser extent, cultivars differ in their radiosensitivity. Radiosensitivity (radiation sensitivity) is a relative measure that gives an indication of the quantity of recognizable effects of the radiation exposure on the irradiated object. The radiosensitivity is influenced by biological factors (such as genetic differences, nuclear and interphase chromosome vol) and by environmental modifying factors (oxygen, water content, post-irradiation storage, and temperature). 
     Modifying factors greatly affect mutagenic efficiency and reproducibility of results. Oxygen is the major modifying factor, while moisture content, temperature, and storage appear to be secondary, interacting with the oxygen effect. Oxygen shows synergistic action with sparsely ionizing radiation, but oxygen effects during irradiation and post-irradiation storage can easily be prevented by adjustment of seed water content to 12-14% in cereals and most other seeds. In oilseeds such as poppies, the seed water content should be lower, around 7-8%. The critical region is the embryo, but it can be assumed that the water content of the seed and the embryo of most species will be similar. Environmental factors are less important with densely ionizing radiation; thus, for fast neutron radiation, no seed moisture adjustment is necessary. 
     Unless data on the radiosensitivity of a given plant are already published or known from experience, the mutation induction program should be preceded by a radiosensitivity test. This is done by irradiating the seeds with a range of doses and by growing out the plants under greenhouse conditions. Radiosensitivity is assessed based on criteria such as reduced seedling height, fertility, and survival in the M1 generation. A seedling height reduction of 30-40% is generally assumed to give a high mutation yield. The usefulness of radiation can be judged by mutagenic efficiency, which is the production of desirable changes free from association with undesirable changes. A high dose will increase mutation frequency (the frequency at which a specific kind of mutation or mutant is found in a population of cells or individuals), but will be accompanied by negative features, such as sterility. When selecting the doses, it will be necessary to find a treatment regime providing high mutagenic efficiency. 
     For fast neutron radiation, dosimetric measurements have to be done during each radiation treatment, e.g., by performing the sulphur threshold detector method, since the neutron flux in the seed irradiation unit is not constant. 
     The Gray (symbol Gy), the SI (Systéme Internationale) unit used to quantify the absorbed dose of radiation (1 Gy=1 J/kg) replaced the old unit rad; 1 Gy=100 rads or 1 krad=10 Gy. The absorbed dose rate (Gy/s or Gy/min) indicates how much energy the irradiated material absorbs during a given unit of time. The length of exposure and the dose rate determines the radiation dose. Exposure during short times (s to a few h) at a high dose rate is referred to as acute and is most applied in irradiation programs. 
     We used the Atomic Energy Research Institute, Konkoly Thebe ut 29/33, X.epulet, H-1121 Budapest, Hungary to irradiate our seeds. 
     Fast neutrons have been shown to be a very effective mutagen. Kornneef et al. (1982) found that about 2500 lines treated with fast neutron at a does of 60 Gy are required to inactivate a gene once on average (Koornneef, M., Dellaert, L. W. M. and van der Veen, J. H. (1982) EMS- and radiation-induced mutation frequencies at individual loci in  Arabidopsis thaliana  (L.) Heynh. Mutat. Res. 93, 109-123). If the plant genome contains about 25000 genes, it is estimated that about 10 genes are randomly deleted in each line. 
     FNM offers a number of advantages over using chemical treatment such as EMS. Notably, the treatment is applied to the dried seed, which can be sown at a later date, while with EMS the seed needs either to be sown immediately after treatment, or carefully re-dried for sowing later. 
     After the seeds have been exposed to the mutagen, the seeds are grown to maturity in controlled conditions and self-pollinated. The seeds from the mature plant are taken and at least one seed is planted to grow an M2 generation. The M2 generation is screened for alkaloid production. Of course, it is possible to screen the M1 generation, but there are several advantages to screening the M2 generation. Firstly, screening the M2 generation insures that the trait resulting from mutagenesis can be inherited. Secondly, by growing the M2 generation, the basic hardiness of the plant is proven before screening. Thirdly, traits resulting from mutagenesis are generally inherited as recessive genes. Typically the mutated gene will be in the heterozygous state in the M1 generation, and thus the mutation will be masked by the dominant (non-mutated) form of the gene. In the M2 generation, however, in a proportion of the plants the gene will be in the homozygous state, and the affect of the mutation apparent. The M2 plants can be grown to produce an immature capsule, but it is possible to save time and labor if the plants are screened at an earlier stage of growth. It is recommended that the plants be screened at a point beginning at the 6 leaf stage, up to the 10 leaf stage. Screening at this early stage allows many plants to be managed in a small space. The screening process itself is the most labor intensive. Thus, to improve return on labor, only plants that appear healthy should be screened. 
     In the screening process, the objective is to measure each plant for morphine, codeine, thebaine and oripavine content. Additional alkaloids which can also be measured during the screening process include salutaridine, reticuline, laudanine, papaverine and noscapine. This can be accomplished by extracting, for example, a dry leaf into a liquid buffer or by dissolving a latex sample into a buffer. The buffer solutions are placed onto 96 well trays and fed mechanically through any of the high-throughput HPLCs available on the market. In a preferred embodiment, an isocratic Ultra high performance Liquid Chromatography (UPLC) method, as described herein, is utilized which provides very rapid latex screening. 
     Plants with interesting alkaloid contents are grown further and examined in more detail. According to the procedure herein, a second sample is taken from about 3% of plants to clarify or confirm the results of the initial screen. A more precise gradient UPLC method as described herein is used to obtain more accurate peak identification and quantification. Plants confirmed to have an unusual alkaloid profile are transplanted to 200 mm (approx 8 inch) pots for growing to maturity. Twenty one plants having high thebaine and substantially no oripavine, morphine or codeine were found after screening approximately 34,358 plants. 
     As used herein, the term “poppy straw” or “straw” shall mean the straw material which results when the mature poppy capsules and the poppy capsule stems of a  Papaver somniferum  plant are collected, and threshed to remove the seeds to form a straw. 
     The term “opium”, as used herein, shall refer to the air-dried, milky exudation (i.e., the latex) from incised, unripe poppy capsules of a  Papaver somniferum  plant. 
     As used herein, the term “concentrate of poppy straw” or “CPS” shall mean the material arising when poppy straw has entered into a process for the concentration of its alkaloids in either liquid, solid or powder form which contains the phenanthrene alkaloids of the opium poppy. 
     The phrase “stand of  Papaver somniferum ” or “stand of stably reproducing  Papaver somniferum ”, as used herein, refers to a group of two or more  Papaver somniferum  plants or stably reproducing  Papaver somniferum  plants located together. 
     As used herein, the term “alkaloid combination” shall refer to a combination of alkaloids wherein the alkaloid comprises morphine, codeine, thebaine and oripavine. In another embodiment of the present invention, the alkaloid combination further comprises salutaridine, reticuline, laudanine, papaverine and noscapine in addition to morphine, codeine, thebaine and oripavine. 
     A “stably reproducing”  Papaver somniferum  poppy plant as described herein refers to a poppy plant that is stably reproducing as required to plant and harvest seed poppy crop over multiple generations where each generation would be suitable, without seed selection, for commercial planting of a field crop or stand of plants exhibiting the desired alkaloid characteristics. A stably reproducing poppy plant contains the desired alkaloid characteristics as described herein, and when self pollinated, or cross pollinated by a plant with the same genes controlling alkaloid content, produces a subsequent generation of plants which substantially all have seed that when grown produces plants with the same desired alkaloid characteristics as the parent plant. Moreover, in the absence of pollination with pollen from other chemotypes (e.g., conventional morphine accumulating plants), the line will continue to produce similar plants over multiple generations, without the need for selection to maintain the desired alkaloid characteristic. An example of a desired alkaloid characteristic which can be passed on to future generations by a stably reproducing  Papaver somniferum  poppy plant includes the improved thebaine characteristics (e.g., wherein thebaine constitutes about 90% (preferably, 95%, more preferably, 96% and most preferably, 97%) by weight or greater, and oripavine constitutes about 10% (preferably, 1%, more preferably, 0.8% and most preferably, 0.7%) by weight or less of the alkaloid combination). 
     As used herein, the “M1 population” is the seeds and resulting plants exposed to a mutagenic agent, while “M2 population” is the progeny of self-pollinated M1 plants, “M3 population” is the progeny of self-pollinated M2 plants, “M4 population” is the progeny of self-pollinated M3 plants, and generally “Mn population” is the progeny of self-pollinated Mn-1 plants. 
     As stated above, there is obtained by the present invention, a poppy straw, concentrate of poppy straw or opium having thebaine constituting about 90% by weight or greater and oripavine constituting about 10% by weight or less of an alkaloid combination comprising morphine, codeine, thebaine and oripavine. Preferably, thebaine constitutes about 95% (more preferably, about 96% and most preferably, about 97%) by weight or greater, and oripavine constitutes about 1% (more preferably, about 0.8% and most preferably, about 0.7%) by weight or less of the alkaloid combination comprising morphine, codeine, thebaine and oripavine. In a preferred embodiment, the alkaloid combination further comprises salutaridine, reticuline, laudanine, papaverine and noscapine. More preferably, there is substantially no oripavine, morphine or codeine in the alkaloid combination, and most preferably, there is substantially no oripavine, morphine, codeine, salutaridine, reticuline, laudanine, papaverine or noscapine in the alkaloid combination. 
     As used herein, the term “substantially no” when referring to oripavine content means that oripavine constitutes less than 0.6% by weight, preferably, less than 0.5% by weight, more preferably, less than 0.4% by weight, and most preferably, between 0% and 0.2% by weight of the alkaloid combination of the poppy straw, concentrate of poppy straw or opium. 
     The term “substantially no”, when referring to morphine, codeine, salutaridine, reticuline, laudanine, papaverine or noscapine, as used herein, means that each of the specified alkaloids constitutes less than 1% by weight, preferably, less than 0.5% by weight, more preferably, less than 0.3% by weight, and most preferably, between 0% and 0.2% by weight of the alkaloid combination of the poppy straw, concentrate of poppy straw or opium. 
     The term “trait”, as used herein, mean a distinct heritable phenotypic characteristic. The desired traits, i.e., high thebaine content versus oripavine, morphine or codeine content, once established are highly heritable. To maintain the desired traits, care should be taken to prevent cross-pollination with normal plants unless such cross-pollination is part of a controlled breeding program. 
     The desired traits can be transferred into poppy lines having other characteristics (e.g. different height, early or late maturity or having disease resistance) by cross pollinating the high thebaine plant with the second parent plant, collecting F1 seed, growing a F1 plant which is allowed to self-pollinate and collect the F2 seed. The F2 seed would then be grown, and individual plants that have the high thebaine characteristic could be selected according to the methods herein, along with the other desired characteristics such as disease resistance. A skilled operator will be able to apply variations to this method as known in plant breeding. 
     Conducting test crosses with plants of known genotype can provide information regarding the genetic changes introduced through mutation. The characteristics of the F1 generation produced by crossing to a normal (wild type) parent will indicate whether a trait inherits as a recessive or dominant gene. Self pollinating the F1 plants and determining the phenotypes of the subsequent F2 population of plants will provide information regarding the numbers of genes responsible for particular characteristics. 
     The theory whereby mutagenesis has been found to be capable of raising the thebaine content of  Papaver somniferum  relative to the oripavine, morphine and codeine content is not capable of a certain or definite explanation at this time. The mutagenesis might have modified the biosynthesis pathway in any number of ways to minimize the production of oripavine. Despite the fact that definite answers are not now available, there are good reasons to believe that the correct answer is known. 
       Papaver somniferum  is postulated to have two biosynthetic pathways from thebaine to morphine as shown in Scheme 4. Pathway A via neopinone, codeinone and codeine was proposed by Parker, H. I., J. Am. Chem. Soc., 94, 1276-1282 (1972). Pathway B via oripavine and morphinone was proposed by Brochmann-Hanssen, E., Planta Med., 50, 343-345 (1984). The enzyme codeinone reductase (NADPH) is believed to be active in both pathways, reducing codeinone to codeine and morphinone to morphine. Further, the TOP1 mutation (Millgate et al., Nature, Vol. 431, 413-414, 2004) affects both pathways, preventing thebaine being converted to neopinone in Pathway A, and preventing oripavine being converted to morphinone in Pathway B. The TOP1 mutation appears to block demethylation of the enol ether which converts thebaine to neopinone, as well as the demethylation of the same enol ether in oripavine. 
     By the methods herein, plants of  Papaver somniferum  were obtained having substantially no oripavine, morphine or codeine. Both Pathway A and Pathway B were inoperative to produce morphine in the parent line using the TOP1 mutation. The most probable step that has been affected by mutation is the phenolic O-demethylation step between thebaine and oripavine. Thus, it is believed, for the  Papaver somniferum  plants described herein, that the production or activity of the phenolic O-demethylase enzyme that converts thebaine to oripavine has been substantially inhibited. Stably reproducing  Papaver somniferum  in accordance with the present invention may also be obtained by recombinant DNA techniques. In particular, after isolation and sequencing of the gene coding for thebaine demethylase, the gene may be modified or deleted to inhibit or prevent the production of thebaine demethylase. Techniques for modifying gene activity such as RNAi, antisense and other techniques are well known to those skilled in the art. Once the gene coding is established, a TILLING technique may be used to more efficiently recover mutants from populations (Henikoff, S., Till, B. J. and Comai, L. (2004) TILLING. Traditional mutagenesis meets functional genomics. Plant Physiology 135, 630-636). 
     Knowing that there are genetic means of reducing the conversion of thebaine to oripavine in poppies, and that now that we have shown that these poppies are achievable and viable, even conventional breeding approaches may ultimately be used to develop such plants. 
     
       
         
         
             
             
         
       
     
     Recovering thebaine from either the dried straw or from the opium of  Papaver somniferum  is a process well established in the art. Until now, thebaine has been extracted from this plant species either as a part of the process of extracting morphine and codeine, or more recently as part of the process of extracting thebaine and oripavine. 
     In one process, the straw is treated with a small amount of lime and water to soften the capsules and to form a free base of the alkaloids. Countercurrent extraction of the softened straw with methanol, ethanol or other suitable solvent forms a solvent/water extract or “miscella” containing the alkaloids, with morphine at a concentration of about 1 g/L where the straw is from standard  Papaver somniferum . The volume of the miscella is reduced about 30× under vacuum to produce an aqueous concentrate. Thebaine is extracted from aqueous concentrate using a liquid/liquid extraction with toluene, adjusting pH for the best separation of thebaine. The thebaine is recovered from the toluene. Of course, recovering thebaine from the improved  Papaver somniferum  provided herein will be facilitated by the fact that the concentration of the thebaine in the miscella will be much higher than that of other alkaloids and thus can be more easily collected by precipitation. Also, in the substantial absence of oripavine, morphine and codeine, the thebaine might be directly extracted from the straw using toluene, xylene or other organic solvent in which thebaine has solubility. 
     The following Examples are set forth to aid in the understanding of the invention, and are not intended and should not be construed to limit in any way the invention set forth in the claims which follow thereafter. 
     Example 1 
     A selection of  Papaver somniferum  poppy, WF03-0802 is used as the starting material. This line contains the TOP1 mutation and therefore has the characteristics of containing thebaine and oripavine in its poppy straw and opium, and is substantially free of morphine and codeine. Seeds of WF03-0802 have been deposited under the Budapest Treaty with the American Type Culture Collection, 10801 University Boulevard, Manassas, Va. 20110-2209, on Mar. 20, 2008, under ATCC Patent Deposit Designation PTA-9110. All restrictions to the deposited seeds will be irrevocably withdrawn for the enforceable life of the patent and without restriction or condition released to the public upon the issuance of a patent. The availability of these seeds is not to be construed as a license to practice this invention in contravention of rights granted under the authority of any government in accordance with its patent or breeder&#39;s rights laws. 
     Six seed samples each of 10 g were prepared. One sample was retained as a control. After obtaining the necessary inspections and permits, the 5 samples were sent to the Atomic Energy Research Institute, Budapest, Hungary for irradiation. At the Institute, the samples were removed from their vials, packed into plastic bags and cadmium holders and irradiated with fast neutrons. The dose rates and exposure times were as follows: 
     Treatment 1 10 Gy 13 minutes 17 seconds 
     Treatment 2 20 Gy 26 minutes 30 seconds 
     Treatment 3 25 Gy 33 minutes 16 seconds 
     Treatment 4 35 Gy 46 minutes 27 seconds 
     Treatment 5 50 Gy 66 minutes 13 seconds 
     
         
         
           
             The reported parameters of the irradiation were as follows: 
             Irradiation geometry at BIF of BRR at AERI: 2Y/Cd, rotated 
             Monitored by U-235, Th-232 fission chambers and GM counter. 
             The dose homogeneity within one package is better than 1% 
             The overall dose uncertainty is less than 5%. 
             Total surface gamma activity of samples after irradiation: ˜695 BGND 
           
         
       
    
     Total surface gamma activity of samples on 20 Oct. 2005: &lt;2 BGND
         (1 BGND (background) is ˜90 nGy/h)       

     The seeds were returned to applicants by the Institute, reweighed, and found to have lost an average mass of 1.1%. This is compatible with being transferred into and out of plastic bags, as well as losing some moisture during irradiation. 
     Samples of the seeds were placed on damp filter paper in a Petri dish. After 3 and 7 days, the seeds were examined. Treatments 1 to 4 germinated well, while treatment 5 had very short radicles and only a small percentage of plants with shoots. 
     A pot trial was grown to evaluate the effect of the FNM treatment on plant growth. Two pots were sown with 10 seeds from each of treatments 1, 2, 3, 5 and control. These pots were observed for emergence and plant growth. Irradiation reduced plant emergence and survival from a mean of 9 plants per pot in the control treatment to 8.5 plants in Treatment 1, 7.5 plants in treatment 2, 7 plants in treatment 3, and 4 plants in treatment 5. Development was also delayed with increasing dose, and plant height was reduced by about 10% in treatment 1, 20% in treatment 2, and 40% in treatment 3. 
     The seeds from the treatments 2 and 3 were sown into 200 mm pots filled with potting mix from Forestry Commission Nursery at Perth, Tasmania. 10 seeds were sown per pot, and were covered with vermiculite. The plants were grown through to maturity in a greenhouse. All flowers were self pollinated by transferring pollen from the anthers onto the stigmatic disc. The mature capsules were harvested into large paper bags, labeled with the treatment number, keeping the different treatments separate. Where there were 2 or more capsules on one plant, these were picked into a paper bag so they stayed together. Distinctive plants were harvested into separate bags and notes made on their appearance. The harvested capsules were stored for a week or so to ensure that the seed was air dry. 
     The seed was separated from the capsules in the laboratory, and weighed into paper envelopes labeled with FN1-X where FN1 refers to Fast Neutron experiment 1, and X is the sequence number of the seed sample. The seed from multiple capsules from the same plant was combined into the one sample. 
     The seed from a total of 8,495 plants was harvested. 7,280 of these were from radiation treatment 2. The median weight of seeds harvested per M1 plant was 0.41 g. 
     Growth and Screening of M2 Generation 
     Plant Growth 
     M2 plants were grown in a greenhouse in trays each with 288 cells. 12 cells were sown with seed from each M1 plant. Two seeds were sown in each cell, and thinned to one plant per cell after 1-2 weeks. The plants were sown in batches of 4-17 trays each week to spread the workload over 17 weeks. 
     Leaf Sampling 
     When the plants were approximately 6 weeks old, they were analysed for alkaloid profile using the latex from the youngest fully expanded leaf (YFEL). 240 μL of latex extraction solution (23 g NH 4 H 2 PO 4  dissolved in 800 mL deionized (Dl) water, made up to 1 L with ethanol) was added to the wells of 96 well filter plates (Pall AcroPrep™ 96 Filter Plate 0.2 μm GHP membrane, natural housing, 350 μL PN S5045, (Pall Corporation, East Hills, N.Y.)). The tip of the YFEL was removed from each plant and placed in a well of the filter plate using fine forceps. Three filter plates were required to sample the plants in one tray. The plates were allowed to stand for about 30 minutes after sampling to allow the latex to bleed out of the leaves into the extraction solution. The solution was then filtered into a 96 well collection plate, which was sealed with an ABgene® Adhesive PCR foil seals (Abgene, part of ThermoFisher Scientific, Rockford, Ill.) to eliminate evaporation. 
     UPLC Method 
     The UPLC method used for the first screening stage is described in Example 2. Peak areas were exported to a Excel file (Microsoft Corporation, Seattle, Wash.) for data analysis. No correction was applied for differing UV absorption between the alkaloid peaks. The relative absorption of oripavine and thebaine, the main peaks of interest, were in any case very similar at the wavelength used. 
     Data Analysis 
     Relative peak areas were calculated for all identified alkaloids. The Excel data files were then sorted to identify plants having high thebaine content and low oripavine content relative to all identified alkaloids extracted. The chromatograms of plants identified as being of interest were reviewed to ensure that the peaks of interest were correctly integrated. 
     Confirmation 
     The plants identified in the first screening were then resampled to provide confirmation of the alkaloid profile, and to ensure that the correct plant was located prior to transplanting. The selected plants were marked with a plastic coated wire when retested so that they could be identified reliably for transplanting. A gradient UPLC system with a 2.5 minute run time (described in Example 2) was used in the confirmation testing in order to obtain more accurate peak identification and integration. 
     Transplanting 
     Plants confirmed as being of interest were transplanted into 200 mm pots, and labelled with a code, indicating the M1 seed line from which they were derived. For instance, if two selections were made from the M1 seed sample labelled FN1-1234, these selections were labelled FN1-1234-1, and FN1-1234-2. Up to 5 plants were transplanted into each pot. 
     Table 2, below, shows the number of plants analysed, the number of selections made, and the number of selections confirmed. Over the project, 34,358 M2 plants (from 4,176 M1 lines) were tested, and 1,049 were selected for further testing. 549 of these were confirmed and transplanted into pots. Of the 549 transplanted, 366 were selected on the basis of high thebaine and low oripavine content. 
     
       
         
           
               
               
               
               
               
               
               
             
               
                 TABLE 2 
               
             
            
               
                   
               
               
                   
                 Irradiation 
                   
                   
                   
                   
                 Confirmations 
               
            
           
           
               
               
               
               
               
               
               
               
            
               
                   
                 Treatment 
                 Tray 
                 Number plants  
                 Selections 
                   
                   
                 % of 
               
            
           
           
               
               
               
               
               
               
               
               
               
            
               
                 Batch 
                 No. 
                 numbers 
                 analysed 
                 No. 
                 % selns 
                 No. 
                 % of plants 
                 selections 
               
               
                   
               
            
           
           
               
               
               
               
               
               
               
               
               
            
               
                 1 
                 2 
                  1-4 
                 927 
                 51 
                 5.5 
                 23 
                 2.5 
                 45 
               
               
                 2 
                 2 
                  5-8 
                 856 
                 15 
                 1.8 
                 12 
                 1.4 
                 80 
               
               
                 3 
                 2 
                  9-12 
                 914 
                 29 
                 3.2 
                 23 
                 2.5 
                 79 
               
               
                 4 
                 2 
                  13-16 
                 976 
                 37 
                 3.8 
                 27 
                 2.8 
                 73 
               
               
                 5 
                 2 
                  17-20 
                 924 
                 40 
                 4.3 
                 14 
                 1.5 
                 35 
               
               
                 6 
                 2 
                  21-28 
                 1900 
                 47 
                 2.5 
                 21 
                 1.1 
                 45 
               
               
                 7 
                 2 
                  29-35 
                 1670 
                 27 
                 1.6 
                 16 
                 1.0 
                 59 
               
               
                 8 
                 2 
                  36-43 
                 1746 
                 85 
                 4.9 
                 30 
                 1.7 
                 35 
               
               
                 9 
                 2 
                  44-52 
                 2134 
                 39 
                 1.8 
                 39 
                 1.8 
                 100 
               
               
                 10 
                 2 
                  53-60 
                 1890 
                 31 
                 1.6 
                 31 
                 1.6 
                 100 
               
               
                 11 
                 2 
                  61-77 
                 3524 
                 104 
                 3.0 
                 51 
                 1.4 
                 49 
               
               
                 12 
                 2 
                  78-91 
                 2737 
                 86 
                 3.1 
                 29 
                 1.1 
                 34 
               
               
                 13 
                 2 
                  92-111 
                 4591 
                 119 
                 2.6 
                 58 
                 1.3 
                 49 
               
               
                 14 
                 3 
                 297-313 
                 2808 
                 109 
                 3.9 
                 74 
                 2.6 
                 68 
               
               
                 15 
                 2 
                 129-145 
                 2108 
                 117 
                 5.6 
                 44 
                 2.1 
                 38 
               
               
                 16 
                 2 
                 146-162 
                 2467 
                 56 
                 2.3 
                 34 
                 1.4 
                 61 
               
               
                 17 
                 2 
                 163-174 
                 2186 
                 57 
                 2.6 
                 23 
                 1.1 
                 40 
               
               
                 Totals: 
                   
                   
                 34358 
                 1049 
                 3.1 
                 549 
                 1.60 
                 52.3 
               
               
                   
               
            
           
         
       
     
     Table 3, below, lists the 366 selections made on the basis of high thebaine and low oripavine content in latex from leaf samples. The alkaloid profile is based on peak area, not alkaloid concentration. 
                                         TABLE 3                      M1            Alkaloid profile (percentage of area under peaks)                                                                         Seln   Seed       Plate/   Mor-       Saluta-           Lauda-   Papa-       Nos-   Selection       No.   Line   Tray   Position   phine   Oripavine   ridine   Codeine   Reticuline   nine   verine   Thebaine   capine   Name                                                                             29   105   7   P20 B10   2   1.7   1   0   0   1   0   94   0   FN1-105-2       41   165   9   P27 B8   0   4.9   1   0   1   2   0   90   1   FN1-165-1       42   165   9   P27 B9   0   4.4   2   0   2   2   0   90   0   FN1-165-2       46   183   10   P29 C6   0   6.5   1   0   1   1   0   91   0   FN1-183-1       54   223   12   P34 B1   0   5.7   2   0   0   2   0   91   0   FN1-223-1       64   269   13   P39 D9   0   3.7   1   0   1   1   0   92   0   FN1-269-1       65   270   13   P39 E3   0   4.5   2   0   1   1   0   90   0   FN1-270-1       66   272   13   P39 G8   0   2.3   1   0   2   1   0   92   0   FN1-272-1       68   291   14   P42 B12   0   2.2   2   0   1   1   0   93   0   FN1-291-1       72   300   15   P43 C10   0   6.3   1   0   1   1   0   90   1   FN1-300-2       74   317   15   P45 D2   0   2.4   1   0   0   0   0   96   0   FN1-317-1       77   329   16   P46 H2   0   4.9   1   0   1   1   0   92   0   FN1-329-1       78   333   16   P47 D10   0   5.4   1   0   1   0   0   93   0   FN1-333-1       79   340   16   P48 C1   0   5.8   0   0   1   1   0   91   1   FN1-340-1       80   340   16   P48 C2   0   6.1   0   0   1   1   0   91   1   FN1-340-2       83   340   16   P48 C10   1   6.4   1   0   1   1   0   90   0   FN1-340-5       84   345   16   P48 H1   0   2.6   1   0   2   1   0   92   1   FN1-345-1       85   345   16   P48 H5   0   4.9   1   0   2   1   0   91   1   FN1-345-2       94   399   19   P55 F9   0   1.5   0   0   1   2   0   92   1   FN1-399-3       95   399   19   P55 F11   0   2.1   0   0   1   0   3   90   0   FN1-399-4       96   404   19   P56 C5   0   1.5   0   0   1   1   0   93   0   FN1-404-1       100   461   21   P63 D6   0   3.6   1   0   1   1   1   92   0   FN1-461-1       103   486   22   P66 D1   0   3.5   1   0   2   2   0   91   1   FN1-486-1       106   557   25   P75 C1   0   1.1   0   0   0   0   0   98   0   FN1-557-1       107   593   27   P79 G5   0   3.9   0   0   1   1   0   94   1   FN1-593-1       110   601   27   P80 G6   0   0.4   0   0   1   0   0   97   1   FN1-601-1       111   607   27   P81 E12   0   3.5   0   0   1   0   0   95   0   FN1-607-1       114   622   28   P83 D9   0   4.3   0   0   1   1   0   93   1   FN1-622-1       115   625   28   P83 G12   0   3.6   0   0   1   1   0   94   0   FN1-625-1       117   630   28   P84 D11   0   4.4   0   0   0   0   0   96   0   FN1-630-1       119   633   28   P84 G9   0   4.3   0   0   2   1   0   92   1   FN1-633-1       120   503   23   P68 E8   0   3.3   1   0   1   0   0   94   0   FN1-503-1       122   640   29   P85 F8   0   4.0   0   0   1   1   0   93   1   FN1-640-1       123   658   29   P87 H4   0   5.8   0   0   2   1   0   90   1   FN1-658-1       124   674   30   P89 H7    0   2.8   0    0   1    1   0   95   1   FN1-674-1       125    675   30   P90 A10    0    1.5   0   0   1   2   0    94   1   FN1-675-1        127    736    33    P97 F8   0    3.9   0    0    1   1   0    93   1   FN1-736-1        128   743   33   P98 E8   0   4.2    0    0   3    1   0   91   1   FN1-743-1        129    748    33   P99 B7   0    4.8   0    0    2    1    0   91    1   FN1-748-1        130    754    33   P99 H8   0   5.6    0    0   2   1   0    91   1   FN1-754-1       131   754   33   P99 H12   0   4.1   0   0   1   1   0   93   1   FN1-754-2       132   775   34   P102 E8   0   3.9   0   0   2   1   0   93   0   FN1-775-1       134   695   31   P92 E4   0   9.0   0   0   0   0   0   90   1   FN1-695-2       139   809   36   P106 G1   0   1.7   0   0   0   8   0   91   0   FN1-809-1       140   809   36   P106 G2   0   0.0   0   0   0   0   4   96   0   FN1-809-2       143   841   37   P110 G10   4   2.1   0   0   0   0   0   94   0   FN1-841-1       144   846   37   P111 D1   1   2.0   0   0   1   1   0   95   0   FN1-846-1       145   846   37   P111 D2   0   0.0   0   0   0   0   0   100   0   FN1-846-2       146   846   37   P111 D12   0   1.1   0   0   2   0   0   97   0   FN1-846-3       147   874   38   P114 H5   0   1.6   0   0   0   0   0   98   0   FN1-874-1       148   874   38   P114 H6   0   3.2   0   0   0   0   0   97   0   FN1-874-2       149   875   39   P115 A5   0   0.0   0   0   0   0   0   100   0   FN1-875-1       150   884   39   P116 B9   3   2.0   0   0   0   0   0   95   0   FN1-884-1       153   900   40   P118 B1   0   0.0   0   0   0   0   0   98   1   FN1-900-1       154   900   40   P118 B3   0   0.5   0   0   0   1   0   97   1   FN1-900-2       155   900   40   P118 B6   0   0.3   0   0   0   0   0   97   1   FN1-900-3       156   900   40   P118 B8   0   0.0   0   0   0   0   0   98   1   FN1-900-4       157   900   40   P118 B12   0   0.0   0   0   1   1   0   98   0   FN1-900-5       158   902   40   P118 D3   0   1.6   0   0   0   0   0   97   0   FN1-902-1       159   912   40   P119 F4   0   1.8   0   0   1   0   1   92   1   FN1-912-1       160   915   40   P120 A6   0   1.9   0   0   0   1   0   93   2   FN1-915-1       161   916   40   P120 B12   0   1.2   0   0   0   1   0   98   0   FN1-916-1       162   945   41   P123 G8   0   2.5   0   0   0   0   0   94   1   FN1-945-1       163   945   41   P123 G11   0   1.6   0   0   0   0   0   96   0   FN1-945-2       167   998   44   P130 D6   0   0.8   0   0   0   0   0   99   0   FN1-998-1       168   998   44   P130 D8   0   2.1   0   0   0   0   0   97   0   FN1-998-2       172   1027   45   P134 A4   0   0.9   0   0   0   0   0   98   0   FN1-1027-1       173   1027   45   P134 A10   0   1.4   0   0   0   0   0   98   0   FN1-1027-2       174   1050   46   P136 H5   0   1.6   0   0   0   0   0   98   0   FN1-1050-1       175   1050   46   P136 H11   0   2.5   0   0   0   1   0   96   0   FN1-1050-2       176   1085   47   P141 C5   0   2.7   0   0   0   0   0   96   0   FN1-1085-1       178   1108   48   P144 B, 3   0   0.0   3   0   0   0   0   97   0   FN1-1108-1       179   1116   49   P145 B, 9   0   3.6   0   0   0   0   0   94   1   FN1-1116-1       180   1123   49   P146 A, 11   0   3.6   0   0   0   0   0   95   0   FN1-1123-1       181   1133   49   P147 C, 9   0   1.3   0    0   0   1   0   93   2   FN1-1133-1       183    1139   50   P148 A, 5    0    2.9   0    0    0    0    1    95   1    FN1-1139-1        184    1139   50   P148 A, 8    0    3.8    0   1   0   0    2   92   0   FN1-1139-2       185   1141   50   P148 C, 6   0    0.0    1   1   0   0   0   95   1    FN1-1141-1        187    1149   50   P149 C, 3    0    1.3   0    0    0    0   0   97   2    FN1-1149-1       188   1153   50   P149 G, 4   0   0.4    0    0   0    0    1   97   0   FN1-1153-1       192    1170    51   P151 H, 2    0    3.6   0    0    0    0   0    94   1    FN1-1170-1       194    1176    51   P152 F, 12   0    3.9    0    0    0   0   0   93   1   FN1-1176-1       195   1180   51   P153 B, 7   0   0.7   0    2   0    1   0    92    2   FN1-1180-1       196    1180    51    P153 B, 10   0   2.5   0    0    0   0    0    97   0    FN1-1180-2       197   1183   51   P153 E, 9   0   0.9    0   0   0   0    2   95    1   FN1-1183-1       198   1183   51   P153 E, 11   0   0.8   0   0   0   0   0   94   3   FN1-1183-2       199   1185   51   P153 G, 8   0   0.4   0   1   0   0   0   98   0   FN1-1185-1       200   1186   51   P153 H, 9   0   2.2   0   0   0   0   0   95   1   FN1-1186-1       203   1201   52   P155 G, 3   0   3.5   0   0   1   0   0   93   1   FN1-1201-1       204   1204   52   P156 B, 1   0   3.0   0   0   0   0   0   95   1   FN1-1204-1       205   1211   52   P156 G, 2   0   2.5   0   0   0   0   0   95   0   FN1-1211-1       208   1242   54   P160 E1   0   0.0   0   0   0   0   0   100   0   FN1-1242-1       209   1242   54   P160 E8   0   0.0   0   0   0   0   0   100   0   FN1-1242-2       210   1242   54   P160 E9   0   0.0   0   0   0   0   0   100   0   FN1-1242-3       213   1270   55   P164 A11   0   0.0   0   0   0   0   0   100   0   FN1-1270-1       214   1272   55   P164 C6   0   0.0   0   0   0   0   0   100   0   FN1-1272-1       216   1303   56   P168 B, 2   0   4.3   0   0   1   1   0   92   1   FN1-1303-1       217   1313   57   P169 D, 8   0   5.2   0   0   0   0   1   94   0   FN1-1313-1       218   1326   57   P171 A, 5   0   3.9   0   0   0   0   0   93   1   FN1-1326-1       219   1326   57   P171 A, 11   0   2.5   0   1   0   0   1   94   1   FN1-1326-2       220   1331   57   P171 F, 7   0   2.3   0   0   0   0   0   96   1   FN1-1331-1       224   1366   59   P176 3:A, 11   0   1.9   0   0   0   0   0   98   0   FN1-1366-1       225   1370   59   P176 3:E, 6   0   2.2   0   0   0   0   0   97   0   FN1-1370-1       226   1373   59   P176 3:H, 11   0   0.5   0   0   0   0   0   99   0   FN1-1373-1       227   1376   59   P177 4:C, 4   0   0.0   0   0   0   0   0   98   0   FN1-1376-1       229   1381   59   P177 4:H, 11   0   2.2   0   0   0   0   0   97   1   FN1-1381-1       230   1387   60   P178 5:F, 1   0   1.2   0   0   0   0   0   97   0   FN1-1387-1       232   1401   60   P180 7:D, 11   0   0.0   0   0   0   0   0   95   1   FN1-1401-1       233   1402   60   P180 7:E, 12   0   0.0   0   0   0   0   0   96   3   FN1-1402-1       234   1403   60   P180 7:F, 1   0   1.2   0   0   0   0   0   95   1   FN1-14034       235   1405   60   P180 7:H, 5   0   0.0   0   0   0   0   0   96   2   FN1-1405-1       236   1405   60   P180 7:H, 6   0   0.0   0   0   0   0   1   97   0   FN1-1405-2       237   1413   61   P181 H4   0   0.0   0   0   0   0   0   100   0   FN1-1413-1       238   1419   61   P182 F2   0   0.0   0   0   0   0   0   100   0   FN1-1419-1       239   1432   62   P184 C3   0   0.0   0   0   0   0   0   100   0   FN1-1432-1       240   1444   62   P185 G1   0   0.0   0   0   0   0   0   100   0   FN1-1444-1       241   1447   62   P186 B3   0   0.0   0   0   0   0   0   100   0   FN1-1447-1       242   1474   63   P189 E7   0   0.0   0   0   0   0   0   100   0   FN1-1474-1       245   1519   65   P195 B6   0   0.0   0   0   0   0   0   100   0   FN1-1519-1        246    1519    65   P195 B7    0    0.0   0    0    0   0   0    100   0   FN1-1519-2        248    1533    66    P196 H12   0   0.0    0   0   0   0    0    100    0    FN1-1533-1       249    1534    66   P197 A5   0   0.0   0   0   0   0   0   100    0    FN1-1534-1       250   1534   66    P197 A6    0   0.0   0    0    0    0   0   100    0    FN1-1534-2        251   1535   66    P197 B11   0    0.0   0    0    0    0   0   100    0    FN1-1535-1       252    1536    66    P197 C7   0   1.7   0   0    0   0   0   98   0   FN1-1536-1        254   1567   67   P201 B7   0   0.0   0   0    0   0    0    100   0   FN1-1567-1        255    1571    67   P201 F10   0   0.0   0   0   0   0   0   100   0    FN1-1571-1       256    1571   67   P201 F11    0    0.0   0   0   0   0   0   100    0   FN1-1571-2       257    1571   67   P201 F12   0   0.0    0    0    0    2   0    98    0   FN1-1571-3       258    1571   67   P201 F2   0    0.0    0    0    0    0    0   100    0   FN1-1571-4       259   1571   67   P201 F3   0   0.0   0   0   0   0   0   100   0   FN1-1571-5       260   1571   67   P201 F4   0   0.0   0   0   0   0   0   100   0   FN1-1571-6       261   1571   67   P201 F5   0   0.0   0   0   0   0   0   100   0   FN1-1571-7       262   1571   67   P201 F7   0   0.0   0   0   0   0   0   100   0   FN1-1571-8       263   1571   67   P201 F8   0   0.0   0   0   0   0   0   100   0   FN1-1571-9       264   1571   67   P201 F9   0   0.0   0   0   0   0   0   100   0   FN1-1571-10       265   1573   67   P201 H12   0   0.0   0   0   0   0   0   100   0   FN1-1573-1       268   1600   69   P205 C11   0   0.0   0   0   0   0   0   100   0   FN1-1600-1       269   1621   69   P207 H4   0   0.0   0   0   0   0   0   100   0   FN1-1621-1       270   1625   70   P208 D2   0   1.9   2   0   1   2   0   94   0   FN1-1625-1       271   1659   71   P212 F8   0   1.4   0   0   2   0   0   97   0   FN1-1659-1       272   1660   71   P212 G8   0   1.9   0   0   1   0   0   97   0   FN1-1660-1       273   1662   71   P213 A11   0   1.8   1   0   1   0   0   96   0   FN1-1662-1       274   1662   71   P213 A12   0   1.5   0   0   1   0   0   97   0   FN1-1662-2       275   1701   73   P217 H2   0   1.0   0   0   0   0   0   99   0   FN1-1701-1       276   1702   73   P218 A11   0   2.0   0   0   0   0   0   97   1   FN1-1702-1       277   1703   73   P218 B2   0   1.3   0   0   0   0   0   99   0   FN1-1703-1       279   1719   74   P220 B1   0   0.0   0   0   0   0   0   100   0   FN1-1719-1       280   1741   74   P222 H8   0   1.5   0   0   0   0   0   98   0   FN1-1741-1       281   1741   74   P222 H12   0   0.0   0   0   0   0   0   100   0   FN1-1741-2       282   1744   75   P223 C9   0   0.0   0   0   0   0   0   100   0   FN1-1744-1       283   1763   75   P225 F8   0   0.0   0   0   0   0   0   100   0   FN1-1763-1       284   1771   76   P226 F2   0   0.8   1   0   0   0   0   98   0   FN1-1771-1       285   1771   76   P226 F3   0   0.0   0   0   0   0   0   100   0   FN1-1771-2       287   1813   77   P231 H11   0   1.8   1   0   1   0   0   94   0   FN1-1813-1       290   1835   78   P234 C9   0   1.9   0   0   3   3   0   92   0   FN1-1835-2       291   1835   78   P234 C11   0   1.8   0   0   4   2   0   92   0   FN1-1835-3       292   1841   79   P235 D8   0   0.0   0   0   0   0   0   100   0   FN1-1841-1       295   1869   80   P238 H5   0   0.9   0   0   0   0   0   99   0   FN1-1869-1       296   1869   80   P238 H8   0   1.4   0   0   0   0   0   98   0   FN1-1869-2       298   1898   81   P242 E5   0   1.3   0   0   1   1   0   97   0   FN1-1898-1       299   1913   82   P244 D4   0   0.0   0   0   0   0   0   100   0   FN1-1913-1       301   1944   83   P248 C1   0   1.6   0   0   1   0   0   97   0   FN1-1944-1       304   2017   86   P257 C12   0   1.0   1   0   0   0   0   98   0   FN1-2017-1        307   2085   89   P265 G1   0   2.3   0   0   0   0   0    96   0    FN1-2085-1        308   2085   89   P265 G2    0   1.4   0    0   0   0   0   99   0   FN1-2085-2        309   2103   89   P267 H2   0   1.2   0   0   0   0   0   99   0   FN1-2103-1        310   2114   90   P269 C2   0   0.8   1   0   1   0   0   97   0   FN1-2114-1        311   2115   90   P269 D5    0    1.0   0   0   0    0    0   99   0   FN1-2115-1       312   2152   91   P273 H3   0   0.8   0   0   0   0   0   99   0   FN1-2152-1        313   2152    91   P273 H7   0   0.0   0   0   0   0   0   100   0   FN1-2152-2        314   2152    91   P273 H9   0   0.8   0   0   0   0   0   99   0   FN1-2152-3       315   2152   91   P273 H11   0   0.0   0   0   0   0   0   100   0   FN1-2152-4       317   2154   92   P274 B4   0   4.1   0   0   0   0    4    92   0   FN1-2154-1       318    2172   92   P276 D7    0    0.0   0   0   0   0   0   100   0   FN1-2172-1       319   2175   92   P276 G8   0   0.0   0   0   0   0   0   100   0   FN1-2175-1       321   2186   93   P278 B6   0   2.0   0   0   0   0   0   98   0   FN1-2186-1       322   2186   93   P278 B11   0   0.0   0   0   0   0   0   98   0   FN1-2186-2       324   2196   93   P279 D5   0   1.3   0   1   1   3   0   94   0   FN1-2196-1       325   2199   93   P279 G3   0   0.0   0   0   0   0   0   100   0   FN1-2199-1       326   2199   93   P279 G10   0   0.0   0   0   0   0   0   100   0   FN1-2199-2       327   2200   93   P279 H1   0   0.0   0   0   0   0   0   97   0   FN1-2200-1       330   2215   94   P281 G2   0   0.0   0   0   0   0   3   91   0   FN1-2215-1       331   2215   94   P281 G6   0   0.0   0   0   0   0   0   97   0   FN1-2215-2       332   2219   94   P282 B2   0   0.0   0   0   0   0   0   100   0   FN1-2219-1       333   2219   94   P282 B6   0   0.0   0   0   0   0   0   100   0   FN1-2219-2       335   2221   94   P282 D8   0   0.0   4   0   0   0   4   93   0   FN1-2221-1       336   2224   94   P282 G4   0   0.0   0   0   0   0   0   100   0   FN1-2224-1       337   2231   95   P283 F5   0   0.0   0   0   0   0   0   100   0   FN1-2231-1       338   2231   95   P283 F12   0   0.0   0   0   0   0   0   100   0   FN1-2231-2       339   2233   95   P283 H7   0   3.0   0   0   0   0   0   97   0   FN1-2233-1       340   2241   95   P284 H1   0   0.0   0   0   0   0   0   100   0   FN1-2241-1       341   2241   95   P284 H4   0   2.7   0   0   0   0   0   97   0   FN1-2241-2       342   2243   95   P285 B9   0   0.0   0   0   0   0   0   96   0   FN1-2243-1       343   2245   95   P285 C5   0   0.0   0   0   0   0   0   98   0   FN1-2245-1       344   2245   95   P285 C10   0   0.0   0   0   0   0   0   100   0   FN1-2245-2       345   2255   96   P286 E9   0   0.0   0   0   0   0   0   100   0   FN1-2255-1       346   2267   96   P288 A10   1   0.0   1   0   0   0   0   99   0   FN1-2267-1       349   2280   97   P289 F11   0   0.0   0   0   0   5   0   91   4   FN1-2280-1       354   2288   97   P290 F9   0   0.9   0   0   1   1   0   96   1   FN1-2288-1       355   2325   99   P295 C5   0   0.0   0   0   0   0   0   100   0   FN1-2325-1       356   2329   99   P295 G4   0   0.0   0   0   2   2   0   97   0   FN1-2329-1       357   2365   100   P300 C9   0   0.0   0   0   0   2   0   98   0   FN1-2365-1       358   2372   101   P301 B1   0   0.0   0   0   0   0   0   100   0   FN1-2372-1       361   2412   102   P306 B2   0   0.7   0   0   0   0   0   99   0   FN1-2412-1       362   2425   103   P307 G8   0   0.0   0   0   0   0   0   100   0   FN1-2425-1       363   2427   103   P308 A6   0   0.0   0   0   0   0   0   100   0   FN1-2427-1       364   2437   103   P309 C12   0   0.0   0   0   0   0   0   100   0   FN1-2437-1       365   2443   104   P310 A1   0   0.7   0   0   1    0    0   97   0   FN1-2443-1       367   2492   106   P316 A5    0   0.0   0   0    0    1    0    99   0   FN1-2492-1        374   2604    110   P330 A6    0   0.0   0   0   0   1   0   99   0   FN1-2604-1        376    7299    298   P892 C2    0    0.0    0   0   0   3   0   97   0   FN1-7299-2        377    7299    298   P892 C3    0   0.0   0   0   0   2   0   98   0   FN1-7299-3        378    7299    298   P892 C4    0   0.5   0   0    0    1   0   98   0   FN1-7299-4        379    7299    298   P892 C10   0   0.7   0   0   0   2   0   98   0   FN1-7299-5        380    7299    298   P892 C12   0    0.0   0   0   0   3   0   97   0   FN1-7299-6        381    7303    298   P892 G10   0    0.0   0   0   0   0   0   100   0   FN1-7303-1        382    7304    298   P892 H2    0    0.0   0   0   0   0   0   100   0   FN1-7304-1        383    7304    298   P892 H5    0    0.0   0   0   1   1   0   98   0   FN1-7304-2        384    7306    296   P893 B6    0    0.0   0   0   0   1   0   98   1   FN1-7306-1       385   7325   299   P895 E10   0   0.0   1   0   1   2   0   97   0   FN1-7325-1       386   7329   299   P896 A8   0   0.0   0   0   0   0   0   100   0   FN1-7329-1       387   7329   299   P896 A10   0   0.0   0   0   0   1   0   99   0   FN1-7329-2       388   7332   299   P896 D3   0   0.0   0   0   0   1   0   99   0   FN1-7332-1       389   7341   299   P897 E3   0   0.0   0   0   0   0   0   100   0   FN1-7341-1       390   7342   299   P897 F1   0   0.0   0   1   0   2   0   97   0   FN1-7342-1       391   7342   299   P897 F9   0   0.0   0   1   0   2   0   96   1   FN1-7342-2       393   7348   300   P898 D5   0   1.1   0   0   0   0   0   99   0   FN1-7348-1       394   7353   300   P898 H1   0   0.6   0   0   0   0   0   99   0   FN1-7353-1       395   7354   300   P899 A3   0   0.0   0   0   0   1   0   99   0   FN1-7354-1       396   7354   300   P899 A8   0   0.0   0   0   0   1   0   99   0   FN1-7354-2       397   7355   300   P899 B2   0   0.0   0   0   0   0   0   100   0   FN1-7355-1       398   7355   300   P899 B5   0   0.0   0   0   0   1   0   99   0   FN1-7355-2       399   7373   301   P901 C10   0   1.0   0   0   0   0   0   99   0   FN1-7373-1       400   7378   301   P901 H1   0   0.0   0   0   1   0   0   99   0   FN1-7378-1       401   7380   301   P902 B9   0   0.0   0   0   0   0   0   100   0   FN1-7380-1       402   7386   301   P902 H6   0   0.0   0   0   1   1   0   98   0   FN1-7386-1       403   7386   301   P902 H9   0   0.0   0   0   0   0   0   100   0   FN1-7386-2       404   7397   302   P904 B1   0   0.0   0   0   0   0   0   100   0   FN1-7397-1       405   7399   302   P904 D3   0   0.0   0   0   0   3   0   97   0   FN1-7399-1       406   7400   302   P904 E12   0   0.0   0   0   0   0   0   100   0   FN1-7400-1       407   7445   303   P909 H12   0   0.9   0   0   0   1   0   98   0   FN1-7445-1       408   7447   304   P910 B9   0   0.7   0   0   0   0   0   98   0   FN1-7447-1       409   7448   304   P910 C6   0   0.0   0   0   0   0   0   98   2   FN1-7448-1       410   7452   304   P910 G1   0   0.0   0   0   1   1   0   98   0   FN1-7452-1       411   7462   304   P911 H6   0   0.9   0   0   0   0   1   99   0   FN1-7462-1       412   7467   304   P912 C1   0   0.6   0   0   0   1   0   97   0   FN1-7467-1       413   7467   304   P912 C2   0   0.4   1   0   0   2   0   97   0   FN1-7467-2       414   7471   304   P912 G7   0   1.0   0   0   0   0   0   98   1   FN1-7471-1       415   7472   304   P912 H2   0   0.0   0   0   0   0   0   95   5   FN1-7472-1       416   7491   305   P914 G8   0   0.8   0   0   0   0   0   99   0   FN1-7491-1       417   7499   305   P915 F2   0   1.2   0   0   0   0   0   99   0   FN1-7499-1       418   7506   306   P916 B6   0   1.1   0   0   1   0   1   97   0   FN1-7506-1       419   7509   306   P916 D1   0   0.0   0   0   0   0   0   100   0   FN1-7509-1       420   7513   306   P916 H5   0   1.0   0   0   1   1   0   96   1    FN1-7513-1        421   7525    306   P918 C10    0   1.3   0   0   1   1   0    95   1   FN1-7525-1        422   7529    306    P918 G11    0    0.0   0   0   0   0   0   100   0   FN1-7529-1       423    7535   307    P919 E8    0   0.0   0   0   0   0   0   97   3   FN1-7535-1       424    7536   307    P919 F1    0    1.2   0   0   2   1   0   96   0   FN1-7536-1        426    7551    307    P921 C5    0   0.0   0   0   0    0    0   100   0   FN1-7551-1       427   7557    308   P922 A12   0    0.0   0   0    0    0   0   100   0   FN1-7557-1        428    7558    308    P922 B7    0   0.0   0   0   0   0   0   100   0   FN1-7558-1       429   7560   308   P922 D8    0   1.2   0   0   0   1   0   98   0   FN1-7560-1       430   7566   308   P923 B9    0   0.0   0   0    0   0   2   98   0   FN1-7566-1       431    7579    308    P924 F3    0   0.8   0   0   3   0   2   92   2   FN1-7579-1       432   7584   309   P925 B3   0   0.0   0   0   1   1   0   98   0   FN1-7584-1       433   7587   309   P925 E7   0   0.0   0   0   0   0   0   100   0   FN1-7587-1       434   7592   309   P926 B2   0   0.0   0   0   0   0   0   100   0   FN1-7592-1       435   7592   309   P926 B4   0   0.7   0   0   1   1   0   97   0   FN1-7592-2       436   7598   309   P926 H3   0   0.7   0   0   1   2   0   95   1   FN1-7598-1       437   7598   309   P926 H10   0   0.7   1   0   1   1   0   96   1   FN1-7598-2       438   7600   309   P927 B1   0   0.0   0   0   0   0   0   100   0   FN1-7600-1       439   7600   309   P927 B5   0   0.0   0   0   0   0   0   100   0   FN1-7600-2       440   7629   310   P930 C8   0   1.1   0   1   0   0   0   95   1   FN1-7629-1       441   7640   311   P931 B4   0   0.0   0   1   0   0   0   96   1   FN1-7640-1       442   7647   311   P931 F1   0   0.0   0   3   0   0   0   96   0   FN1-7647-1       443   7656   311   P932 F3   0   1.7   0   1   0   0   0   94   1   FN1-7656-1       444   7666   311   P933 G8   0   1.0   0   1   0   0   0   95   1   FN1-7666-1       445   7674   312   P934 F3   0   1.4   0   1   0   0   0   96   1   FN1-7674-1       446   7686   312   P936 A6   0   0.0   0   0   0   0   0   100   0   FN1-7686-1       447   7702   313   P937 H8   0   0.9   0   0   0   0   0   98   1   FN1-7702-1       448   7718   313   P939 G6   0   0.0   0   0   0   1   0   99   0   FN1-7718-1       450   3122   132   P394 E2   0   0.0   0   0   0   5   0   95   0   FN1-3122-1       451   3123   132   P394 F12   0   0.0   0   0   0   5   0   95   0   FN1-3123-1       452   3132   132   P395 G11   0   0.0   0   0   0   6   0   94   0   FN1-3132-1       453   3141   132   P396 G1   0   0.8   0   0   1   1   0   96   1   FN1-3141-1       454   3141   132   P396 G10   0   0.0   0   0   0   0   4   96   0   FN1-3141-2       455   3158   133   P398 G6   0   0.0   0   0   0   3   0   97   0   FN1-3158-1       456   3176   134   P400 G1   0   0.9   0   0   3   1   0   95   0   FN1-3176-1       457   3206   135   P404 E3   0   0.0   0   0   0   0   4   96   0   FN1-3206-1       458   3209   135   P404 H11   0   0.0   0   0   1   0   2   96   1   FN1-3209-1       459   3215   135   P405 F5   0   1.0   0   0   1   0   2   95   1   FN1-3215-1       460   3228   136   P407 C8   0   0.0   0   0   1   2   0   97   0   FN1-3228-1       461   3258   137   P410 G4   0   0.0   0   0   1   0   4   94   1   FN1-3258-1       462   3270   138   P412 B3   0   0.0   0   0   0   5   0   95   0   FN1-3270-1       463   3288   138   P414 C7   0   0.0   0   0   0   0   3   97   0   FN1-3288-1       464   3295   139   P415 A2   0   0.0   0   0   2   4   0   94   0   FN1-3295-1       465   3296   139   P415 B10   0   0.0   0   0   0   3   0   97   0   FN1-3296-1       466   3296   139   P415 B12   0   1.0   0   0   0   2   0   97   0   FN1-3296-2       467   3297   139   P415 C12   0   0.0    0    0   1   0   3   95   0   FN1-3297-1        468   3299   139    P415 E1    0   0.0   0    0    0   0   3    96    1   FN1-3299-1       469   3300   139    P415 F2    0    0.0   0   0   1   0   3   95   0   FN1-3300-1       472   3310   139    P416 H4    0   0.0   0   0   0   2   0   96   1   FN1-3310-1       473   3320   140    P418 B10    0   0.6   0   0   1   2   0   96   1   FN1-3320-1       474   3326   140    P418 H2    0    0.0   0   0   0   2   0   98   0   FN1-3326-1       475   3328   140    P419 B2    0   0.0    0    0   1   1   0   98   1   FN1-3328-1       476   3328   140    P419 B7    0    0.0   0   0   0   0   7   91   0   FN1-3328-2       477   3306   139    P416 D7    0   3.9   0   0   0   0   1   94   1   FN1-3306-1       478   3365   141    P423 F3    0    0.0   0   0   0   7   0   93   0   FN1-3365-1       479   3368   141    P423 H10   0   0.0   0   0   0   0   0   100   0   FN1-3368-1       480   3376   142   P424 H9   0   0.0   0   0   0   2   0   98   0   FN1-3376-1       481   3376   142   P424 H11   0   0.0   0   0   0   2   0   98   0   FN1-3376-2       482   3383   142   P425 G9   0   0.0   0   0   0   0   0   100   0   FN1-3383-1       483   3386   142   P426 B9   0   0.0   0   0   0   2   0   98   0   FN1-3386-1       484   3387   142   P426 C5   0   0.0   0   0   1   1   0   98   0   FN1-3387-1       485   3387   142   P426 C7   0   0.0   0   0   0   0   0   98   2   FN1-3387-2       486   3388   142   P426 C7   0   0.0   0   0   0   1   0   97   1   FN1-3388-1       487   3406   143   P428 F12   0   0.0   0   0   0   0   0   100   0   FN1-3406-1       488   3408   143   P428 H11   0   1.0   0   0   1   1   0   97   0   FN1-3408-1       489   3413   143   P429 E2   0   0.0   0   0   2   0   0   98   0   FN1-3413-1       491   3444   145   P433 C12   0   0.0   0   0   0   0   0   100   0   FN1-3444-1       493   3488   146   P438 F4   0   0.0   0   0   2   0   0   98   0   FN1-3488-1       494   3492   147   P439 B4   0   0.0   0   0   4   2   0   93   0   FN1-3492-1       495   3497   147   P439 G3   0   0.0   0   0   0   0   0   100   0   FN1-3497-1       496   3497   147   P439 G4   0   0.0   0   0   0   0   0   100   0   FN1-3497-2       497   3497   147   P439 G11   0   0.0   0   0   0   0   0   100   0   FN1-3497-3       498   3531   148   P443 H1   0   0.0   0   0   0   0   0   100   0   FN1-3531-1       500   3608   151   P453 C8   0   1.1   0   0   1   0   1   97   0   FN1-3608-1       501   3612   151   P453 G6   0   0.0   0   0   0   0   0   100   0   FN1-3612-1       503   3635   152   P456 F1   0   1.1   0   0   1   1   0   96   1   FN1-3635-1       504   3635   152   P456 F2   0   0.0   0   0   0   0   0   98   0   FN1-3635-2       505   3635   152   P456 F4   0   0.7   0   0   0   0   0   95   0   FN1-3635-3       506   3635   152   P456 F9   0   0.5   0   0   0   0   0   99   0   FN1-3635-4       507   3635   152   P456 F10   0   0.0   0   0   0   0   0   100   0   FN1-3635-5       508   3635   152   P456 F11   0   0.2   0   0   0   0   0   99   0   FN1-3635-6       509   3679   154   P461 G5   0   0.6   0   0   0   1   0   98   0   FN1-3679-1       510   3708   155   P465 D2   0   0.0   0   0   0   0   0   100   0   FN1-3708-1       511   3710   155   P465 F5   0   0.0   0   0   0   0   0   100   0   FN1-3710-1       512   3718   156   P466 F5   0   0.0   0   0   0   0   0   100   0   FN1-3718-1       513   3718   156   P466 F7   0   1.0   0   0   0   0   0   98   1   FN1-3718-2       514   3770   158   P473 B8   0   1.6   0   0   1   0   0   97   0   FN1-3770-1       516   3794   159   P476 A7   0   0.4   0   0   0   0   0   100   0   FN1-3794-1       517   3799   159   P476 F4   0   0.9   0   0   1   0   0   97   1   FN1-3799-1       518   3803   159   P477 B9   0   0.9   0   0   1   0   0   98   1   FN1-3803-1       519   3804   159   P477 C6   0    1.0   0   0   1   0   0   96   1   FN1-3804-1       520   3805   159   P477 D12   0   1.0   0   0   1   0   0   98   1   FN1-3805-1        521   3817    160   P478 H11   0   0.0   0   0   0   0   0   100   0   FN1-3817-1        522    3821    160    P479 D1    0    1.1   0   0   1   0   0   98   0   FN1-3821-1        523   3821    160    P479 D3   0   1.4   0   0   0   0   0   98   1   FN1-3821-2        524   3821    160   P479 D10   0   0.0    0    0    0   0   0   100   0   FN1-3821-3        525   3827    160   P480 B6    0    0.7    0    0   0   0   0   99   0   FN1-3827-1        526   3841    161   P481 H3    0   0.0   0   0   3   0   0   96   1   FN1-3841-1        528    3978    166   P498 H2    0   0.0   0   0   0   0   0   100   0   FN1-3978-1        529    3995    167   P501 A5    0   0.0   0   0   0   0   0   100   0   FN1-3995-1       531    4027   169   P505 A6    0   0.0   0   0   0   0   0   100   0   FN1-4027-1       532   4027   169   P505 A5   0   0.6   0   0   0   0   0   99   0   FN1-4027-2       534   4050   169   P507 H3   0   0.4   0   0   1   0   0   99   0   FN1-4050-1       535   4053   170   P508 C9   0   0.7   0   0   0   0   0   99   0   FN1-4053-1       537   4093   171   P513 C5   0   1.0   0   0   2   1   0   94   1   FN1-4093-1       541   4121   172   P516 G9   0   1.2   0   0   0   0   0   97   1   FN1-4121-1       542   4124   173   P517 B2   0   0.7   0   0   1   1   0   97   1   FN1-4124-1       543   4128   173   P517 F6   1   1.3   0   0   1   0   0   94   0   FN1-4128-1       546   4144   173   P519 F12   0   0.9   0   0   0   0   0   97   0   FN1-4144-1       547   4145   173   P519 G7   0   0.7   0   0   0   0   0   99   0   FN1-4145-1       548   4145   173   P519 G11   0   0.5   0   0   0   0   0   97   0   FN1-4145-2       549   4148   174   P520 B7   0   0.7   0   0   1   1   0   98   0   FN1-4148-1                    
Testing of Poppy Straw Alkaloid Content in M2 Generation
 
     Capsules were harvested from the greenhouse as they matured. Seed was removed and weighed into seed envelopes. The poppy straw was placed into 50 mL BD Falcon™ tubes (BD Biosciences, San Jose, Calif.) without grinding and dried either on the lab bench for several days at room temperature or in the laboratory oven at 50° C. for 3 hours. Where capsules were large, only a portion of the capsule was used for analysis, the rest being discarded. 
     For analysis, the poppy straw was weighed, and either 5 mL or 10 mL acid extractant (5% ethanol (“EtOH”), 0.17% phosphoric acid) added, depending on whether the straw samples weighed less or more than 0.2 g respectively. The samples were agitated with a Ratek orbital shaker (Ratek Instruments,  Boronia , Victoria, Australia) for 3 hours. The liquid phase was then filtered using Pall AcroPrep™ 96 filter plates (PN S5045), and the filtrate was analysed for alkaloids using a Waters Acquity UPLC® system (Waters Corporation, Milford, Mass.). The UPLC method used was the same 2.5 minute method as used for leaf samples. Additional extractant was transferred to 1.2 mL wells in 96 well plates, sealed and frozen in case further analysis was required. 
     The alkaloid contents and profiles were calculated from the UPLC results and weight data. Where the weight was &lt;0.1 g, the weight was deemed as 0.1 g. 
     The seeds were allowed to dry on the laboratory bench, catalogued and stored. 
     Of the 549 M2 plants originally selected, 434 survived to produce at least one capsule for harvest (79%). A further 6 mislabeled capsules were harvested, so their M1 parents were not known. 395 plants produced some seed, although 58 had &lt;0.06 g seed, and only 171 plants produced more than 1 g seed. 
     Due to the potential lack of accuracy with the alkaloid content data (due to low capsule weights and large particle sizes), this data was analysed further only after conversion to alkaloid profiles: i.e. the alkaloid contents in comparison with the total alkaloid content. 
     Where multiple capsules were harvested from one plant, the mean was determined using Minitab 14 statistical software (Minitab Inc., State College, Pa.). 
     Table 4, below, shows the results for 133 M2 selections from 92 independent M1 plants that were high in thebaine (&gt;90% of alkaloids) and low in oripavine (&lt;10%). Thirty six M2 selections from 27 independent M1 plants had more than 95% of the alkaloid in the straw as thebaine. Twenty one selections from 16 independent M1 plants had more than 96% of the alkaloid in the straw as thebaine. Eight selections from 6 independent M1 plants had more than 97% of the alkaloid in the straw as thebaine. One selection, FN1-900-5, was identified that had more than 98% of its alkaloid present as thebaine. It can be seen that the oripavine content in the straw of these plants was very low, with several selections having less than 1% of the alkaloid combination, and some with less than 0.5% of the alkaloid combination. All “thebaine-only” plants however contained a small proportion of oripavine in their poppy straw. 
                     TABLE 4                  Alkaloid profiles (based on alkaloid concentrations in poppy straw) of M2 plants       selected for high thebaine and low oripavine. Means are shown where the       number of capsules (caps) was more than one.                                                             Seln                                                   no.   Seln name   Caps   Morphine    Oripavine   Codeine   Salutaridine   Reticuline   Laudanine   Papaverine   Thebaine   Noscapine                                                                     68   FN1-291-1   15   0.4   4.7   0   0.2   0.9   0.1   0.2   93.3   0.2       106   FN1-5574   1   0   2.8   0   0.3   6.2   0   0   90.7   0       110    FN1-601-1   1   0.1   0.4   0   0   1.5   0.2   0   97.6   0.1       139   FN1-809-1   5   0   1.6   0.1   0.6   4.9   0   0   92.7   0       140    FN1-809-2   2   0   1.7   0.1   0.3   2.1   0   0   95.6   0.2       144   FN1-846-1   1   0   0.1   0   0   2.5   0.1   0   97.2   0       145    FN1-846-2   3   2.6   0.4   0   0   3.1   0.2   0   93.5   0.1       149   FN1-875-1   3   1.8   3.6   0   0.1   1.9   0.1   0   92.4   0.1       153   FN1-900-1   3   6   0.6   0   0.1   1.5   0.2   0   97.5   0.1       154   FN1-900-2   3   0   0.6   0   0.2   1.8   0.2   0   97.1   0.1       155   FN1-900-3   3   0.8   0.5   0   0   2.3   0.2   0   96.1   0.1       156    FN1-900-4   7   2.3   0.6   0   0.2   1.5   0.2   0   94.9   0.3       157   FN1-900-5   1   0   0.6   0   0.2   1   0.1   0   98   0.1       161   FN1-916-1   4   0.6   5.5   0   0.1   1.3   0.1   0   92.3   0.1       167    FN1-998-1   1   1.5   1.1   0.6   0   2.4   0   0   91.4   3.1       168    FN1-998-2   2   0   1   0.1   0.3   2.4   0   0   96.3   0       172    FN1-1027-1   1   0   2.2   0   0   3.1   0   0   94.7   0       173    FN1-1027-2   4   0.3   2.6   0   0.3   2   0.1   0   94.6   0.2       174    FN1-1050-1   8   3.5   1   0   0.4   1.3   0   0   93.7   0       175    FN1-1050-2   2   0.2   3   0   0.1   1.7   0   0   94.8   0.2       180    FN1-1123-1   2   0   1   0   0.4   3.6   0   0   95.2   0       184    FN1-1139-2   1   0   5.7   0   0.1   1.3   0.2   0   92.5   0.1       188    FN1-1153-1   10   0.1   7.9   0   0   1.3   0.1   0   90.6   0       199    FN1-1185-1   3   0   2.9   0   0.1   2.7   0.2   0   93.9   0.2       208    FN1-1242-1   3   1.2   0.6   0   0.1   2.8   0.2   0   95   0.1       209    FN1-1242-2   2   0   0.3   0   0   2.8   0.2   0   96.7   0.1       210    FN1-1242-3   3   0   0.4   0   0.1   1.7   0.1   0   97.5   0.1       219   FN1-1326-2   4   0.5   6.9   0   0.1   1.8   0.1   0   90.6   0.1       240    FN1-1444-1   4   0   5.2   0   0   1.4   0.2   0   93.2   0.2       249    FN1-1534-1   6   0.1   0.7   0   0.5   2.6   0   0   96.1   0       250    FN1-1534-2   2   0.5   1.5   0   0.5   4.9   0   0   92.5   0.2       255    FN1-1571-1   2   0.4   1.5   0   0.5   5.7   0   0   92   0       256    FN1-1571-2   2   0.5   1.8   0   0.7   4.2   0   0   93   0       257    FN1-1571-3   3   0.6   1.5   0   0.5   2.5   0   0   94.7   0       258    FN1-1571-4   2   0.7   1.9   0   0.4   6.9   0.1   0   90.2   0       259    FN1-1571-5   1   0   1.5   0   0.7   3.4   0   0   94.3   0       260    FN1-1571-6   4   0.1   1.2   0.1   0.5   4.9   0   0   93.2   0       261    FN1-1571-7   3   0   1.3   0   0.3   5   0   0   93.3   0       262   FN1-1571-8   1   1   1.7   0   0.8   2.3   0   0   94   0.2       263   FN1-1571-9   3   0.6   1.8   0   0.8   4.6   0   0.1   92.1   0       264    FN1-1571-10   4   0.2   1.4   0.1   0.4   5   0   0   92.9   0       270   FN1-1625-1   1   0   2.3   0   0.3   1.2   0.3   0   95.7   0.1       273   FN1-1662-1   1   0   4.6   0   0.1   1.4   0   0.6   93.1   0.3       275    FN1-1701-1   2   0   2.9   0.1   0.1   2.2   0.2   0   94.6   0.1       279    FN1-1719-1   4   0.2   0.3   0   0   2.6   0.1   0   96.6   0.1       280    FN1-1741-1   1   0   3.1   0   0   3.4   0.2   0   93   0.3       284    FN1-1771-1   3   0   2   0   0.3   1.1   0.1   0   96.6   0.1       285    FN1-1771-2   2   0   4.8   0   0.2   1.6   0   0   93.4   0.1       292    FN1-1841-1   1   0   4.7   0   0   1.3   0.3   0   93.7   6       296    FN1-1869-2   1   0   2.2   0   0.4   1.7   0.1   0   95.5   0.1       299    FN1-1913-1   3   0   3   0   0   1.8   0   0   95.1   0       307   FN1-2085-1   1   0   4   0   0   2.8   0.1   0   93   0.1       309    FN1-2103-1   5   0.1   6.8   0   0.1   2.1   0.2   0   90.7   0       312    FN1-2152-1   3   0   2.1   0   0.1   5.6   0   0   92.3   0       313    FN1-2152-2   2   0   0.9   0.2   0.6   3.6   0.1   0   94.8   0       314    FN1-2152-3   3   0   1.1   d   0.7   3.4   0   0.1   94.7   0       315    FN1-2152-4   2   0   1.2   0   0.5   3.3   0   0   95   0       318    FN1-2172-1   1   0   4   0   0   4.9   0.2   0   90.8   0.1       319    FN1-2175-1   1   0   8   0   0   1.2   0.1   0   90.4   0.3       321    FN1-2186-1   2   0   3.5   0.1   0.4   1.6   0   0.3   94.1   0.1       325    FN1-2199-1   3   0   0.4   0   0.1   4.3   0.2   0   95   0       326    FN1-2199-2   2   0   0.3   0   0.1   3.6   0.1   0   95.9   0.2       339    FN1-2233-1   1   0   2.8   0   0.1   1.4   0   0   95.7   0       343    FN1-2245-1   2   0   6.1   0   0.1   1.5   0.1   0   92.1   0.2       364    FN1-2437-1   3   0   0.5   0   0.1   3.1   0.2   0   96.2   0       367    FN1-2492-1   1   0   5.5   0   0.1   2.2   0.1   0   92.1   0.1       374    FN1-2604-1   3   0   0.3   0.1   0.1   5.4   0.2   0   93.7   0.2       377    FN1-7299-3   2   0   2.4   0.1   0.2   1.3   0.1   0   95.8   0.2       378    FN1-7299-4   2   0   3.3   0.1   0.2   1.7   0.2   0   94.6   0.2       379    FN1-7299-5   1   0   2.7   0.1   0.4   1.6   0.2   0   94.7   0.3       380    FN1-7299-6   2   0   2   0   0.1   1   0.1   0   96.8   0.1       384   FN1-7306-1   1   0   6.8   0   0   0   0   0   93.1   0.1       396    FN1-7354-2   1   0   0.6   0   1.2   4.3   0   0   93.9   0       400    FN1-7378-1   1   0   4.4   0   0.1   1.7   0   0   93.5   0.3       404    FN1-7397-1   1   0   8   0   0   1   0   0   91   0       407    FN1-7445-1    1   0   5.6   0   0   2.3   0.2   0   91.9   0       408    FN1-7447-1   1   0   3.3   0   0.1   3.5   0.1   0   92.8   0.2       409    FN1-7448-1   1   0   5.2   0   0.1   2.7   0.1   0   91.8   0.2       414    FN1-7471-1   1   0   3.7   0.1   0   3.2   0.2   0   92.3   0.4       416   FN1-7491-1   1   0   6.9   0   0.1   1.1   0.2   0   91.8   0       417   FN1-7499-1   1   0   5.4   0   0   1.6   0.2   0   92.6   0.3       421   FN1-7525-1   2   0   5.5   0   0.1   1.6   0   0.4   92.5   0.1       422   FN1-7529-1   1   0   6.7   0   0.1   2.2   0   0.9   90   0.2       426   FN1-7551-1   1   0   4.6   0   0.1   2.3   0.1   0   92.8   0.1       433   FN1-7587-1   1   0   8.4   0   0   0.6   0.1   0   90.8   0       434   FN1-7592-1   1   0.5   2   0   0.6   0.5   0   0   96.3   0       436   FN1-7598-1   1   0   5.7   0   0.1   2.2   0.1   0   91.7   0.2       437   FN1-7598-2   1   0   4.5   0   0   1.8   0   0   93.5   0.3       443   FN1-7656-1   1   0   7.7   0   0.1   1.4   0   0.5   90.2   0.2       445   FN1-7674-1   5   0   2.4   0   0   2.6   0.1   0.2   94.5   0.2       446    FN1-7686-1   2   0   1.5   0   0.4   4.9   0.1   0   93.3   0       447   FN1-7702-1   1   0   3.2   0   0.1   2   0   0   94.6   0       453   FN1-3141-1   1   0   4.6   0   0.1   2.3   0.2   0   92.7   0.1       454   FN1-3141-2   1   0   8.1   0   0   1.6   0.2   0   90.1   0       455   FN1-3158-1   2   0   8   0   0.1   1.6   0.2   0   90.2   0.1       458   FN1-3209-1   1   0   5   0   0   2   0.2   0   92.5   0.2       461   FN1-3258-1   1   0.3   6.1   0   0   1.8   0.2   0   91.6   0       463   FN1-3288-1   1   0   5.8   0   0.1   1.8   0.2   0   92.1   0.1       465   FN1-3296-1   1   0   8.7   0   0.1   1.1   0.1   0   90.1   0       466   FN1-3296-2   1   0   2.2   0.4   0.2   1.8   0.2   0   95.2   0.1       474   FN1-3326-1   1   0   7.2   0   0.1   1.6   0.2   0   90.9   0.1       475   FN1-3328-1   2   0   0.4   0   0.2   6.5   0.3   0   92.7   0       476   FN1-3328-2   1   0   0.4   0   0.1   2.9   0.2   0   96.3   0.1       477   FN1-3306-1   2   0   2.8   0.1   0.1   2.5   0.1   0   94.3   0.3       480   FN1-3376-1   1   0   5   0   0   1.4   0.3   0   93.3   0       483   FN1-3386-1   1   0   4.6   0.1   0.1   2.6   0   1.1   91.2   0.4       486   FN1-3388-1   1   0   5.5   0   0.1   3.1   0.2   0   90.8   0.3       489   FN1-3413-1   1   0   6.3   0   0.1   2.8   0.1   0   90.6   0.2       495   FN1-3497-1   1   0   1.4   0   0   4   0   0   94.6   0       496   FN1-3497-2   2   0   1.2   0   0.2   2.8   0   0   96   0       497   FN1-3497-3   2   0   1.2   0   0.2   4.7   0   0   94   0       503   FN1-3635-1   2   0   1.2   0   0.3   4   0.1   0   94.3   0.2       504   FN1-3635-2   1   0   1.3   0   0   2.8   0   0   95.9   0       506   FN1-3635-4   1   0   1.2   0   0.4   3.6   0   0   94.8   0       507   FN1-3635-5   1   0   1   0   0   1.9   0   0   97.1   0       508   FN1-3635-6   1   0   1.3   0   0   2.2   0   0   96.5   0       509   FN1-3679-1   1   0   3.2   0.2   0.1   4.6   0   0   91.7   0.3       511   FN1-3710-1   1   0   8.1   0   0   1.3   0.2   0   90.5   0       512   FN1-3718-1   1   0   4   0   0.1   1.5   0.2   0   94.2   0.1       516   FN1-3794-1   2   0   0.1   0   0.1   4   0.2   0   95.7   0.1       521   FN1-3817-1   1   0   7   0   0   1.5   0.1   0   91.4   0       522   FN1-3821-1   1   0.9   5.9   0   0   2.5   0.2   0   90.3   0.3       523    FN1-3821-2   1   0   3.3   0   0.1   3.9   0.2   0   92   0.4       524    FN1-3821-3   1   0   6.7   0   0   2.3   0.1   0   90.9   0       525    FN1-3827-1   1   0   4.7   0   0   1   0.2   0   94.1   0       528    FN1-3978-1   1   0   3   0   0   2.7   0.3   0   94   0       529    FN1-3995-1   2   0   0.8   0   0.1   3.4   0.2   0   95.5   0.2       534    FN1-4050-1   2   0   0.1   0   0.1   2.7   0.1   0   97   0.1       535    FN1-4053-1   3   0   5.1   0   0   1.7   0.2   0   93.1   0       541    FN1-4121-1   1   0   2.2   0   0   1.6   0.3   0   96   0       542    FN1-4124-1   2   0   6.9   0   0   1.4   0.1   0   91.8   0       546    FN1-4144-1   1   0   4   0   0   2.9   0.3   0   92.7   0       548    FN1-4145-2   1   0   1.9   0   0.5   4.1   0   0   93.5   0                    
Growing and Evaluation of M3 Generation
 
     Two of the highest thebaine lines were selected for increase in a greenhouse over winter 2007 to provide data to confirm their alkaloid composition and genetic stability. Thus, the plants grown in this experiment were the M3 generation. 
     The pots were sown in the greenhouse on 11 Apr. 2007 in double rows, with 120 pots in each double row. Each pot was thinned to 6 plants. Greenhouse conditions were as used previously except that high intensity lights were used to maintain light intensities of approximately 9900 lux for 12 hours per day. 
     At green capsule stage, latex samples were taken from 24 randomly chosen plants from each line. The samples were obtained from the stigmatic discs using the ray-pluck technique. A stigmatic ray was removed from each plant and dropped into acid extraction solution (5% EtOH, 0.17% H 3 PO 4 ) in a filter plate (Pall AcroPrep™ 96 Filter Plate 0.2 μm GHP, NTRL, 350 μL). The rest of the procedure was the same as for leaf latex tests. A separate trial established that there was no significant difference in thebaine or oripavine results attributable to using acid extraction solution instead of latex extraction solution as used previously. 
     Table 5 shows the results of the latex testing at the green capsule stage for the M3 Generation. The number of plants randomly sampled and tested is shown as “N”. All plants tested had the same alkaloid profile of high thebaine and substantially no oripavine or morphine. 
     
       
         
           
               
             
               
                 TABLE 5 
               
             
            
               
                   
               
               
                 Results of the green capsule stage testing. The table shows the percentage of area under chromatogram peaks. 
               
            
           
           
               
               
               
               
               
               
               
               
               
               
               
               
               
               
               
               
            
               
                   
                   
                   
                   
                   
                   
                   
                   
                   
                   
                   
                   
                   
                   
                 Thebaine 
                 Norman 
               
            
           
           
               
               
               
               
               
               
               
               
               
               
            
               
                   
                   
                 Thebaine 
                 Oripavine 
                 Morphine 
                 Codeine 
                 Papaverine 
                 Noscapine 
                 ratio 
                 ratio 
               
            
           
           
               
               
               
               
               
               
               
               
               
               
               
               
               
               
               
               
               
               
            
               
                 Selection 
                 N 
                 Mean 
                 SE 
                 Mean 
                 SE 
                 Mean  
                 SE 
                 Mean 
                 SE 
                 Mean 
                 SE 
                 Mean 
                 SE 
                 Mean 
                 SE 
                 Mean 
                 SE 
               
               
                   
               
               
                 FN1-900-1 
                 23 
                 98.0 
                 0.1 
                 0.5 
                 0.1 
                 0.2 
                 0.0 
                 0.7 
                 0.0 
                 0.6 
                 0.0 
                 0.0 
                 0.0 
                 0.995 
                 0.001 
                 0.99 
                 0.00 
               
               
                 FN1-1242-3 
                 24 
                 98.6 
                 0.0 
                 0.2 
                 0.0 
                 0.1 
                 0.0 
                 0.6  
                 0.0 
                 0.5 
                 0.0 
                 0.0 
                 0.0  
                 0.998 
                 0.000 
                 0.99 
                 0.00 
               
               
                   
               
               
                 Thebaine ratio is the thebaine area divided by the total of the thebaine and oripavine areas 
               
               
                 Norman ratio is the sum of the thebaine and oripavine areas divided by the sum of morphine, oripavine, codeine and thebaine areas 
               
            
           
         
       
     
     When the capsules were dry, the plants were harvested by hand. The harvested capsules were weighed, and then threshed and sieved to separate seed and straw. The straw was sub-sampled and ground to 2 mm. 
     The straw was extracted using acid extraction solution (5% EtOH, 0.17% H 3 PO 4 ), and analysed using Waters Acquity ULPC® for alkaloid content against standard alkaloid solutions on a dry weight basis. The loss on drying (LOD) of the straw was determined by heating a sample at 88° C. for 9 minutes using an infrared (IR) balance (A&amp;D Company Ltd Model AD4717, Japan). 
     Peak area data was used to calculate alkaloid concentration in the straw according to the following calculation: 
     
       
         
           
             
               Alkaloid 
               ⁢ 
               
                   
               
               ⁢ 
               content 
               ⁢ 
               
                   
               
               ⁢ 
               
                 ( 
                 % 
                 ) 
               
             
             = 
             
               
                 
                   
                     
                       
                         
                           0.1 
                           × 
                           
                             
                               SPLA 
                               × 
                               STDC 
                             
                             _ 
                           
                         
                       
                     
                     
                       
                         STDA 
                       
                     
                   
                   × 
                   
                     
                       
                         
                           ( 
                           
                             EV 
                             + 
                             
                               
                                 
                                   LOD 
                                   ⁢ 
                                   
                                       
                                   
                                   ⁢ 
                                   % 
                                   × 
                                   SW 
                                 
                                 ) 
                               
                               _ 
                             
                           
                         
                       
                     
                     
                       
                         100 
                       
                     
                   
                 
                 
                   
                     
                       
                         SW 
                         × 
                         
                           
                             ( 
                             
                               100 
                               - 
                               
                                 LOD 
                                 ⁢ 
                                 
                                     
                                 
                                 ⁢ 
                                 % 
                               
                             
                             ) 
                           
                           _ 
                         
                       
                     
                   
                   
                     
                       100 
                     
                   
                 
               
               × 
               
                 STDI 
                 SPLI 
               
             
           
         
       
         
         
           
             where SPLA is the area under the sample peak of interest 
             STDC is the concentration of the standard alkaloid in mg/mL 
             STDA is the area under the standard peak 
             EV is extractant volume in mL 
             LOD % is the loss on drying of the straw, expressed as a percentage 
             SW is straw weight extracted in grams. 
             STDI is the volume of standard injected in microlitres 
             SPLI is the volume of sample injected in microlitres 
           
         
       
    
     FN1-900-1 had noticeably low vigour compared with the other lines. The vigour of FN1-1242-3 appeared to be normal. The vigour differences became apparent well after establishment, indicating that it was not a seed quality effect. 
     Table 6 shows the loss on drying of straw and the mean alkaloid content of the duplicate straw samples as determined by UPLC. 
     
       
         
           
               
             
               
                 TABLE 6 
               
             
            
               
                   
               
               
                 Amount of capsule, straw and seed harvested, loss on drying (LOD) of straw,  
               
               
                 and alkaloid content determined by UPLC. 
               
            
           
           
               
               
               
               
               
               
               
               
            
               
                   
                   
                   
                   
                   
                   
                 Alkaloid content  
                   
               
               
                   
                   
                   
                   
                   
                   
                 (dry weight basis) 
                   
               
            
           
           
               
               
               
               
               
               
               
               
            
               
                   
                 Yield (kg/line)  
                 Straw/ 
                 Straw 
                 Thebaine  
                 Oripavine  
                   
                   
               
               
                   
                 air dry basis 
                 Capsule 
                 LOD 
                 %  
                 % 
                 Total  
                 Thebaine 
               
            
           
           
               
               
               
               
               
               
               
               
               
               
            
               
                 Selection 
                 Capsule 
                 Seed 
                 Straw 
                 ratio 
                 (%) 
                 (DWB) 
                 (DWB) 
                 % 
                 ratio 
               
               
                   
               
               
                 FN1-900-1 
                 2.91 
                 1.27 
                 1.64 
                 0.56 
                 7.3 
                 3.07 
                 0.01 
                 3.08 
                 1.00 
               
               
                 FN-1-1242-3 
                 3.33 
                 1.22 
                 2.11 
                 0.63 
                 7.8 
                 3.23 
                 0.02 
                 3.25 
                 0.99 
               
               
                   
               
               
                 Thebaine ratio is the thebaine content divided by the sum of thebaine content and oripavine content. 
               
            
           
         
       
     
     The results show that the poppy straw in the two lines FN1-900-1 and FN1-1242-3 are very high in thebaine content, and very low (0.01% and 0.02%, respectively, in oripavine content). There were no other alkaloids (i.e., morphine, codeine, salutaridine, reticuline, laudanine, papaverine and noscapine) detected using the method described. 
     Growing and Evaluation of M4 Generation 
     Using seed harvested from the M3 generation, 2 large field plots of FN1-1242-3 and one of FN1-900-1 were grown using commercial equipment and methods. No growth regulator sprays were used. Table 7 summarises the alkaloid contents achieved in these crops. At the first site (Elphinstone, Circular Head district of Tasmania), both selections were grown, along with the Norman parent line, WF03-0802. Hand-picked samples taken from the plots assayed at over 5.0% thebaine, and 0.02% oripavine. Machine harvested samples assayed at 4.65% thebaine and 0.02% oripavine (FN1 lines combined). The Norman parent line in the same paddock assayed at 3.05% thebaine and 0.89% oripavine. 
     At Roebuck&#39;s (Merseylea district of Tasmania), the FN1-1242-3 crop assayed at 4.36% thebaine and 0.02% oripavine, whilst the Norman parent line WF03-0802 assayed at an average of 2.08% thebaine and 0.75% oripavine. This data shows that the thebaine-only trait has been inherited into the M4 generation, and that it enables the plants to accumulate very high contents of thebaine. 
     The method used for the straw analysis is as follows. Ten gram samples of ground straw were extracted with 100 mL extraction solution. The extraction solution comprised 30% ethanol and 10% glacial acetic acid. The samples were shaken for 25 minutes and then filtered through Whatman No. 6 filter paper. The solutions were analysed using a Waters Alliance HPLC system fitted with a Alltech Platinum C18 column, 7 mm×53 mm, with 3 micron packing. 
     The mobile phase consisted of 8 mL triethylamine, 125 acetonitrile and 950 mL MilliQ water, adjusted to pH 4.1 with phosphoric acid. The flow rate was 3 mL/minute and the column was maintained at 40 C. The alkaloids were detected using a UV detector at 284 nm. 
     The loss on drying (LOD) of the straw was determined by heating a sample at 88° C. for 9 minutes using an infrared (IR) balance (A&amp;D Company Ltd Model AD4717, Japan). 
     Alkaloid concentrations were determined by comparison with standard solutions, and results calculated on a dry weight basis. The thebaine and oripavine peaks in these samples accounted for over 98%, and morphine and codeine accounted for less than 1%, of the alkaloid peak area, indicating that there was substantially no morphine and codeine in these samples. 
                     TABLE 7                  Summary of commercial results for thebaine-only lines (M4 generation),        compared with parent line.                                     Grower/Load No   Description   Line   Thebaine %   Oripavine %   Total %                                                 Elphinstone   1273   Hand   FN1-1242-3   5.10   0.02   5.12           1274   picked   FN1-900-1   5.25   0.02   5.27               samples                           1302   Parent line   WF03-0802   3.05   0.89   3.94               control                               (machine                               harvested)                           1312   FN1 lines   FN1-1242-3   4.65   0.02   4.67               combined   FN1-900-1                           (machine                               harvested)                       Roebuck   1047   Parent line   WF03-0802   2.07   0.77   2.84               control                           1060   Parent line   WF03-0802   2.09   0.73   2.82               control                           1115   FN1 line   FN1-1242-3   4.36   0.02   4.38                    
Growing and Evaluation of M5 Generation
 
Seeds of the M5 generation of FN1-1242-3 were sown in a field trial at Gawler, Tasmania on 29 Aug. 2008, along with seeds of the parent line WF03-0802. Both lines were sown in three blocked replications in plots 5 m long by 1.6 m wide. Standard commercial practices were used to grow the trial. No growth regulator sprays were used. The trial was harvested on 19 Feb. 2009 by hand picking all the capsules within 2 m 2  quadrats within each plot. The samples were threshed and the poppy straw weighed. After grinding to &lt;2 mm, the poppy straw was extracted and analysed using the same method as used for the M3 generation (described above). Table 8 shows the mean alkaloid contents in the straw and the alkaloid yields per hectare. In this example, the thebaine content of the straw of FN1-1242-3 is 96.3% of the total, and oripavine content is 1.47% of the total, where the total is the sum of morphine, codeine, thebaine and oripavine content of the poppy straw.
 
     
       
         
           
               
             
               
                 TABLE 8 
               
             
            
               
                   
               
               
                 Summary of trial results for thebaine-only line FN1-1242-3 (M5 generation),  
               
               
                 compared with parent line. 
               
            
           
           
               
               
               
               
            
               
                   
                   
                 Alkaloid yield  
                   
               
               
                   
                 Alkaloid content % (dry weight basis) 
                 (kg/hectare) 
                 Thebaine 
               
            
           
           
               
               
               
               
               
               
               
               
               
            
               
                 Line 
                 Morphine 
                 Codeine 
                 Thebaine 
                 Oripavine 
                 Total 
                 Thebaine 
                 Oripavine 
                 ratio 
               
               
                   
               
            
           
           
               
               
               
               
               
               
               
               
               
            
               
                 WF03-0802 
                 0.13 
                 0.00 
                 2.54 
                 1.71 
                 4.38 
                 29.0 
                 19.6 
                 0.60 
               
               
                 FN1-1242-3 
                 0.09 
                 0.00 
                 3.92 
                 0.06 
                 4.07 
                 58.6 
                 0.95 
                 0.98 
               
               
                   
               
               
                 Total is the sum of the contents of morphine, codeine, thebaine and oripavine. 
               
               
                 Thebaine ratio is the thebaine content divided by the sum of thebaine content and oripavine content. 
               
               
                 Alkaloid yield is obtained by multiplying the alkaloid content by the straw yield. 
               
            
           
         
       
     
     Example 2 
     Latex Extraction 
     Reagent 
     Latex Extraction Buffer: 23 g of ammonium dihydrogen phosphate was dissolved in approximately 750 mL deionised water and 200 mL of ethanol added, and made up to 1 L with deionised water. 
     Method 
     Isocratic Method: 
     A Pall AcroPrep™ 96 well, 0.2 μm GHP filter plate was placed on a 96 well, 350 μL collection plate. Both filter and collection plate were labeled and 280 μL of buffer pipetted into each well of the filter plate using a multipipette. Using forceps, a leaf tip approx 5 mm×5 mm was torn off from the plant to be tested and added to the extractant. The latex will bleed into the solution over time. 
     The sample was allowed to incubate at room temperature for at least 30 minutes. The sample was filtered using a vacuum manifold (Pall Corporation product No. 5017). The collection plate was covered with Abgene® adhesive PCR sealing foil (Cat #: AB-0626) to prevent evaporation. The collection plate can be stored in the refrigerator or freezer pending analysis. 
     Analysis Method 
     Instrument:
         Waters Acquity UPLC®, with Sample Organiser and Tunable Ultra Violet (TUV) detector   Waters Column, Bridged Ethyl Hybrid (BEH) particles, C18, 1.7 μm, 2.1×50 mm   TUV detector, wavelength 284 nm       

     Reagents:
         Mobile Phase A—9% methanol, 0.1% formic acid, adjusted with ammonia to pH=9.6   Mobile phase B—91% methanol, 0.1% formic acid, adjusted with ammonia to pH=9.6   Weak Wash—10% methanol   Strong Wash—100% methanol       

     The Sample Manager option “Load Ahead” was used to save time between samples. With this option, each sample was aspirated ready for injection while the previous one was running. 
     
       
         
           
               
             
               
                 TABLE 9 
               
             
            
               
                   
               
               
                 Mobile phase settings 
               
            
           
           
               
               
               
               
               
            
               
                   
                 Time 
                 Flow Rate 
                   
                   
               
               
                   
                 (min) 
                 (mL/min) 
                 % A 
                 % B 
               
               
                   
                   
               
               
                   
                 0-0.8 
                 0.7 
                 35.0 
                 65.0 
               
               
                   
                   
               
            
           
         
       
     
     The samples were automatically injected (injection volume 2.0 or 3.5 μL) and chromatographed by the Acquity UPLC® along with standard reference alkaloids. After the sample set has been run by the Acquity UPLC®, the peaks were identified by comparison with the standards that were run in the sample set. Typical retention times were as follows: 
     
       
         
           
               
               
               
             
               
                   
                   
               
               
                   
                   
                 Retention time 
               
               
                   
                 Alkaloid 
                 (minutes) 
               
               
                   
                   
               
             
            
               
                   
                 Morphine 
                 0.24 
               
               
                   
                 Oripavine 
                 0.27 
               
               
                   
                 Codeine 
                 0.31 
               
               
                   
                 Papaverine 
                 0.38 
               
               
                   
                 Thebaine 
                 0.42 
               
               
                   
                 Noscapine 
                 0.68 
               
               
                   
                   
               
            
           
         
       
     
     The separations obtained using this method are shown in  FIG. 1 . Although the peak shapes and separations are not perfect, they are quite adequate for a very rapid screening method. 
     Empower software (Waters Corporation, Milford, Mass.) was used to identify peaks and calculate peak areas. The data was then exported to an Excel spreadsheet where peak area data was used to determine which poppies had unusual alkaloid profiles. 
     Gradient Method: 
     For more accurate repeat analysis of samples, a 2.5 minute gradient UPLC method was used. It is the same as described above, except that the following gradient conditions were used.  FIG. 2  provides a chromatogram of the poppy straw of the M3 generation of FN1-1242-3. The injection volume of the sample in  FIG. 2  was 2.0 μL. ATA indicates thebaine, ori indicates oripavine peak, AMA represents morphine, and ACA represents codeine. 
     
       
         
           
               
             
               
                 TABLE 10 
               
             
            
               
                   
               
               
                 Instrument method details for 2.5 min gradient method 
               
            
           
           
               
               
               
               
               
            
               
                 Time 
                 Flow Rate 
                   
                   
                   
               
               
                 (min) 
                 (mL/min) 
                 % A 
                 % B 
                 Curve 
               
               
                   
               
            
           
           
               
               
               
               
               
            
               
                 0 
                 0.8 
                 75.0 
                 25.0 
                   
               
               
                 1.4 
                 0.8 
                 1.0 
                 99.0 
                 6 
               
               
                 2.5 
                 0.8 
                 75.0 
                 25.0 
                 1 
               
               
                   
               
            
           
         
       
     
     Example 3 
     Determination of Genetics of Thebaine-Only Trait 
     Crosses were conducted between FN1 lines with low content of oripavine (&lt;2% of combination of morphine, codeine, oripavine and thebaine) and normal poppy lines containing morphine. Plants of the first F1 generation all contained morphine, indicating that the genes responsible for the thebaine-only characteristic are recessive. The F1 plants were self pollinated. Seeds were collected from the F1 plants, and sown in trays. When the plants were at the 6-leaf stage, latex testing was conducted to determine the chemotypes of the individual F2 plants. 
     Latex testing was done according to the method of Example 4 by removing the tip of the youngest fully expanded leaf and placing it in acid extractant buffer in a Pall filter plate. After allowing time for the latex to bleed from the leaf into the buffer, the extractant was vacuum filtered into a 96 well plate and sealed. The samples were analysed by UPLC using the method shown in Example 4. 
     The alkaloid concentrations were calculated from the peak areas by reference to standard alkaloid solutions, and each alkaloid was converted to a percentage of total morphinan alkaloid (morphine, codeine, thebaine and oripavine) in order to determine the chemotype of the plant. A set of rules incorporated in nested “IF” statements was established to determine chemotype. The rules, applied sequentially, were as follows: 
     If total concentration of morphine, codeine, thebaine and oripavine is less than 5 ug/mL in injected solution, no result. 
     If Noscapine percentage &gt;15, chemotype=Noscapine. 
     If Thebaine percentage &gt;98, chemotype=Thebaine-only. 
     If Thebaine+Oripavine percentage &gt;95, chemotype=Norman. 
     If Thebaine+Codeine percentage &gt;96, chemotype=Codeine. 
     If Morphine percentage &gt;2, chemotype=Morphine. 
     Otherwise, the chemotype was classified as OCT, which indicates that the plant contained oripavine, codeine and thebaine. 
     Four chemotypes were identified in the populations: 
     Morphine: morphine present typically with thebaine and codeine 
     Norman: thebaine and oripavine both present, substantially no morphine 
     Thebaine-only: thebaine present, substantially no oripavine and morphine 
     Codeine: thebaine and codeine present, substantially no morphine 
     The occasional plant was identified as OCT. These generally were very small plants that fitted into one of the four categories as they further developed. Overall, 0.18% of plants were classified as OCT and 0.03% were classified as noscapine and were ignored in calculation of ratios for this analysis. 
     Chi square tests were conducted to determine if the observed segregation patterns differed significantly from a 9:3:3:1 segregation of chemotypes (Morphine:codeine:Norman:Thebaine-only respectively). 
     Table 11 shows the results of the 9 populations derived from FN1 parents having a thebaine-only chemotype. Five of these fit a 9:3:3:1 ratio (P&lt;0.05). Of those that didn&#39;t fit the expected ratio, FN1-1242 is notable, in that it had more than the expected number of plants with the codeine chemotype, whilst all other lines that did not fit the ratio had less than expected codeine plants. Further work was conducted with progeny of FN1-1242 in which plants were grown to hook stage, and leaf latex was collected and classified into chemotypes. The distribution was 96:41:42:11, which gives a Chi square test of 3.1 which indicates that there is no significant difference from the expected ratio. 
     The segregation into 4 chemotypes indicates that two separate genes are involved in the thebaine-only chemotype. One of these is the gene associated with the Norman poppy mutation (described in U.S. Pat. No. 6,067,749). The second gene is responsible for the new low-oripavine or thebaine-only trait, which is responsible for blocking the pathway between thebaine and oripavine. These two genetic changes work together in lines described herein to provide the poppy plants with a high thebaine content and a low oripavine content. 
     
       
         
           
               
             
               
                 TABLE 11 
               
             
            
               
                   
               
               
                 Segregation patterns for populations using FN1 lines with &lt;2% oripavine in alkaloid profile. 
               
            
           
           
               
               
               
               
            
               
                   
                 Alkaloid content in straw of FN1 M2 
                 Observed ratio 
                   
               
               
                   
                 plant as percentage of sum of morphine, 
                 Morphine:co- 
                 Chi square test result 
               
               
                   
                 codeine, oripavine and thebaine 
                 deine:Norman:thebaine- 
                 (ns indicates no significant 
               
            
           
           
               
               
               
               
               
            
               
                 FN1 line 
                 Oripavine % 
                 Thebaine % 
                 only 
                 difference from 9:3:3:1 ratio) 
               
               
                   
               
               
                 FN1-846-2 
                 0.24 
                 98.4 
                  39:14:11:4 
                 0.39 ns  
               
               
                 FN1-1719-1 
                 0.31 
                 99.5 
                  45:10:1:0 
                 17.9 &lt; 0.001 
               
               
                 FN1-2199 
                 0.38 
                 99.6 
                  59:25:18:6 
                  1.5 ns 
               
               
                 FN1-1242 
                 0.41 
                 99.2 
                 271:112:81:16 
                 12.81 &lt; 0.01  
               
               
                 FN1-900 
                 0.58 
                 98.8 
                 191:73:55:19 
                 2.79 ns 
               
               
                 FN1-2152 
                 1.38 
                 98.6 
                  73:2:28:14 
                 26.7 &lt; 0.001 
               
               
                 FN1-1571 
                 1.63 
                 97.9 
                 604:58:248:69 
                 114.7 &lt; 0.001  
               
               
                   
               
            
           
         
       
     
     Example 4 
     Leaf Latex Analysis 
     Reagent 
     Acid Extractant: A 1 L measuring cylinder was half filled with deionised water. 1 mL of conc. phosphoric acid and 50 mL ethanol were added and the volume made up to 1 L with deionised water. 
     Method 
     A Pall AcroPrep™ 96 well, 0.2 μm GHP filter plate was placed on a 96 well, 350 μL collection plate. Both filter and collection plate were labeled and 280 μL of acid extractant pipetted into each well of the filter plate using a multipipette. A tip of the youngest fully expanded leaf was torn off each plant to be tested and added to the extractant. The latex bleeds into the solution over time. 
     The samples were allowed to incubate at room temperature for at least 30 minutes. The samples were filtered using a vacuum manifold (Pall Corporation product No. 5017). The collection plate was covered with ABgene® adhesive PCR sealing foil (Cat #: AB-0626) to prevent evaporation. The collection plate can be stored in the refrigerator or freezer pending analysis. 
     Analysis Method 
     The samples were analyzed using the same instrument, reagents and instrument method details (see Table 10) as described for the gradient method in Example 2. 
     The samples were automatically injected and chromatographed by the Acquity UPLC® along with standard reference alkaloids. After the sample set has been run by the Acquity UPLC®, the peaks were identified by comparison with the standards that were run in the sample set. Empower software (Waters Corporation, Milford, Mass.) was used to identify peaks and calculate peak areas. The data was then exported to an Excel spreadsheet where peak area data was used to determine alkaloid profiles. 
     While the foregoing specification teaches the principles of the present invention, with examples provided for the purpose of illustration, it will be understood that the practice of the invention encompasses all of the usual variations, adaptations and/or modifications as come within the scope of the following claims and their equivalents.