Patent Publication Number: US-8110181-B2

Title: Method of treating tuberculosis with interferons

Description:
RELATED APPLICATIONS 
     The present application claims the benefit under 35 U.S.C. §119 of U.S. Provisional Application Ser. No. 60/930,881, filed May 18, 2007 and U.S. Provisional Application Ser. No. 61/063,123, filed Jan. 30, 2008, the contents of both of which applications are hereby incorporated by reference in their entireties. 
    
    
     GOVERNMENT SUPPORT 
     Some research leading to the present invention was supported in part by NIH research Grant No. 5 R01 HL056832. Accordingly, the United States Government has certain rights in the invention. 
    
    
     FIELD OF THE INVENTION 
     This invention relates to methods of treating pulmonary diseases using aerosol interferons, formulations of one or more interferons for aerosol delivery and methods for determining aerosol deposition. 
     BACKGROUND 
       Tuberculosis  is a common and deadly infectious disease that is caused by mycobacteria, primarily  Mycobacterium tuberculosis. Tuberculosis  most commonly affects the lungs but can also affect the central nervous system, the lymphatic system, the circulatory system, the genitourinary system, bones, joints and even the skin. Other mycobacteria such as  Mycobacterium bovis, Mycobacterium africanum, Mycobacterium canetti  and  Mycobacterium microti  can also cause  tuberculosis , but these species do not usually infect healthy adults. Raviglione, et al. (2005). Harrison&#39;s Principle&#39;s of Internal Medicine, 953. 
     Over one-third of the world&#39;s population now has the  tuberculosis  bacterium in their bodies and new infections are occurring at a rate of one per second. World Health Organization (WHO).  Tuberculosis  Fact sheet N°104—Global and regional incidence. March 2006, Not everyone who is infected develops the disease and asymptomatic latent  tuberculosis  infection is most common. However, one in ten latent infections will progress to active  tuberculosis  disease which, if left untreated, kills more than half of its victims. In 2004, 14.6 million people had active  tuberculosis  and there were 8.9 million new cases and 1.7 million deaths, mostly in developing countries. Drug-resistant strains of  tuberculosis  have emerged and are spreading (in 2000-2004, 20% of cases were resistant to standard treatments and 2% were also resistant to second-line drugs). “Emergence of  Mycobacterium tuberculosis  with extensive resistance to second-line drugs—worldwide, 2000-2004”. MMWR Morb Mortal Wkly Rep 55 (11): 301-5. 
     In the patients where  tuberculosis  becomes an active disease, 75% of these cases affect the lungs, where the disease is called pulmonary  tuberculosis . Symptoms include a productive, prolonged cough of more than three weeks duration, chest pain and coughing up blood. Systemic symptoms include fever, chills, night sweats, appetite loss, weight loss and paling, and those afflicted are often easily fatigued. When the infection spreads out of the lungs, extrapulmonary sites include the pleura, central nervous system in meningitis, lymphatic system in scrofula of the neck, genitourinary system in urogenital  tuberculosis , and bones and joints in Pott&#39;s disease of the spine. An especially serious form is disseminated, or miliary  tuberculosis . Extrapulmonary forms are more common in immunosuppressed persons and in young children. Infectious pulmonary  tuberculosis  may co-exist with extrapulmonary  tuberculosis , which is not contagious. Centers for Disease Control and Prevention (CDC), Division of  Tuberculosis  Elimination. Core Curriculum on  Tuberculosis : What the Clinician Should Know. 4th edition (2000). Updated August 2003. 
     The primary cause of  tuberculosis, Mycobacterium tuberculosis  (MTB), is a slow-growing aerobic bacterium. Microbiology 150 (Pt 5): 1413-26. MTB is identified microscopically by its staining characteristics: it retains certain stains after being treated with acidic solution, and is thus classified as an “acid-fast bacillus” or AFB. Madison (2001) Biotech Histochem 76 (3): 119-25. In the most common staining technique, the Ziehl-Neelsen stain, AFB are stained a bright red which stands out clearly against a blue background. Acid-fast bacilli can also be visualized by fluorescent microscopy, and by an auramine-rhodamine stain. 
       Tuberculosis  is spread by aerosol droplets expelled by people with the active disease of the lungs. Transmission can only occur from people with active—not latent—TB disease. The probability of transmission from one person to another depends upon the quantity of the infectious droplets expelled by the patient, the effectiveness of ventilation, the duration of exposure, and the virulence of the  Mycobacterium tuberculosis  strain. Centers for Disease Control and Prevention (CDC), Division of  Tuberculosis  Elimination. Core Curriculum on  Tuberculosis : What the Clinician Should Know. 4th edition (2000). The chain of transmission can therefore be broken by isolating patients with active disease and starting effective anti-tuberculous therapy. 
       Tuberculosis  is classified as one of the granulomatous inflammatory conditions. Macrophages, T lymphocytes, B lymphocytes and fibroblasts are among the cells that aggregate to form a granuloma, with lymphocytes surrounding the infected macrophages. The granuloma functions not only to prevent dissemination of the mycobacteria, but also provides a local environment for communication of cells of the immune system. Within the granuloma, T lymphocytes (CD4+) secrete cytokines such as interferon gamma, which activates macrophages to destroy the bacteria with which they are infected. Kaufmann (2002) Ann Rheum Dis 61 Suppl 2: ii54-8. T lymphocytes (CD8+) can also directly kill infected cells. Houben et al. (2006) Curr Opin Microbiol 9 (1): 76-85. 
     HIV-1-infection markedly reduces host defense and increases disease progression in the absence of DOTS, highlighting the role of cellular immunity in controlling mycobacteria. Transgenic knockout models of mycobacteria-exposed mice demonstrated that interferon-γ and its signaling intermediates are critical to host defense (Flynn et al.,  J Exp Med  1993; 178:2249-2254; Kamijo et al.,  J Exp Med  1993; 178:1435-1440). In humans, mutational defects in the interferon-γ receptor, the cytokine IL-12, or antibodies to interferon-γ result in disseminated mycobacterial infection (Seneviratne et al.,  Thorax  2007; 62:97-99; Dorman et al.,  Lancet  2004; 364:2113-2121). Treatment of these patients with recombinant interferon-γ has been successful and safe. 
     Responses of whole blood PBMC to PPD and other mycobacterial antigens are reduced in active  tuberculosis  probably due to suppressor T cells (Tregs or Th17 cells) or cytokines, e.g. IL-10 or TGF-β (Hirsch et al.,  J Infect Dis  1999; 180: 2069-73; Hougardy et al., Am J Respir Crit Care Med 2007; 176: 409-416). Bronchoalveolar lavage (BAL) of patients with pulmonary  tuberculosis  has shown increases in interferon-γ and percent CD4+ cells compared to uninfected controls, but in advanced, cavitary  tuberculosis  or TB/HIV-1 coinfection these markers of effective immunity are reduced (Law et al.,  Am J Respir Crit Care Med  1996; 153:1377-1384; Condos et al., Am J Respir Crit Care Med 1998; 157:729-735). Progression from  tuberculosis  infection to  tuberculosis  disease occurs when the  tuberculosis  bacilli overcome the immune system defenses and begin to multiply. In primary  tuberculosis  disease—1 to 5% of cases—this occurs soon after infection. However, in the majority of cases, a latent infection occurs that has no obvious symptoms. These dormant bacilli can produce  tuberculosis  in 2 to 23% of these latent cases, often many years after infection. Parrish et al., (1998) Trends Microbiol 6 (3): 107-12. The risk of reactivation increases with immunosuppression, such as that caused by infection with HIV. In patients co-infected with  M. tuberculosis  and HIV, the risk of reactivation increases to 10% per year. Onyebujoh et al.  World Health Organization Disease Watch: Focus: Tuberculosis . December 2004. 
     Treatment for  tuberculosis  uses antibiotics to kill the bacteria. The two antibiotics most commonly used are rifampicin or rifampin and isoniazid. However, these treatments are more difficult than the short courses of antibiotics used to cure most bacterial infections as long periods of treatment (around 6 to 12 months) are needed to entirely eliminate mycobacteria from the body. Centers for Disease Control and Prevention (CDC), Division of  Tuberculosis  Elimination.  Core Curriculum on Tuberculosis: What the Clinician Should Know.  4th edition (2000). Latent  tuberculosis  treatment usually uses a single antibiotic, while active  tuberculosis  disease is best treated with combinations of several antibiotics, to reduce the risk of the bacteria developing antibiotic resistance. O&#39;Brien R (1994) Semin Respir Infect 9 (2): 104-12. People with these latent infections are treated to prevent them from progressing to active  tuberculosis  disease later in life. However, treatment using Rifampin and Pyrazinamide is not risk-free. The Centers for Disease Control and Prevention (CDC) notified healthcare professionals of revised recommendations against the use of rifampin plus pyrazinamide for treatment of latent  tuberculosis  infection, due to high rates of hospitalization and death from liver injury associated with the combined use of these drugs. (2003) MMWR Morb Mortal Wkly Rep 52 (31): 735-9. 
     Drug resistant  tuberculosis  is transmitted in the same way as regular  tuberculosis . Primary resistance occurs in persons who are infected with a resistant strain of  tuberculosis . A patient with fully-susceptible  tuberculosis  develops secondary resistance (acquired resistance) during  tuberculosis  therapy because of inadequate treatment, not taking the prescribed regimen appropriately, or using low quality medication. O&#39;Brien R (1994) Semin Respir Infect 9 (2): 104-12. Drug-resistant  tuberculosis  is a public health issue in many developing countries, as treatment is longer and requires more expensive drugs. Multi-drug resistant  tuberculosis  (MDR- tuberculosis ) is defined as resistance to the two most effective first line  tuberculosis  drugs: rifampicin and isoniazid. Extensively drug-resistant  tuberculosis  (XDR-TB) is also resistant to three or more of the six classes of second-line drugs. (2006) MMWR Morb Mortal Wkly Rep 55 (11): 301-5. 
     Clinical trials of recombinant interferon-γ (rIFN-γ) in humans are few. As of 1999, IFN-γ is indicated for the treatment of chronic granulomatous disease in which prolonged treatment (average duration 2.5 years) was associated with improvement in skin lesions, with minimal adverse events (fever, diarrhea, and flu-like illness) ( N Engl J Med  324 (8):509-16; Bemiller et al. (1995)  Blood Cells Mol Dis  21(3): 239-47; Weening et al., (1995)  Eur J Pediatr  154(4): 295-8). Boguniewicz treated 5 patients with mild atopic asthma with escalating doses of aerosolized r IFN-γ (maximum dose of 500 mcg, total study dose of 2400 mcg) delivered over 20 days (Boguniewicz et al., (1995)  J Allergy Clin Immunol  95(1) Pt 1: 133-5). All patients tolerated the nebulized r IFN-γ but there were no significant changes in the endpoints evaluated which included peak flow. InterMune sponsored several clinical trials to evaluate IFN-γ for infectious diseases. The MDR-TB clinical trial was entitled “A Phase II/III Study of the Safety and Efficacy of Inhaled Aerosolized Recombinant Interferon-γ 1 b in Patients with Pulmonary Multiple Drug Resistant  Tuberculosis  (MDR-TB) Who have Failed an Appropriate Three Month Treatment.” This study enrolled 80 MDR-TB patients at several sites and randomized them to receive aerosol rIFN-γ (500 μg MWF) or placebo for at least 6 months in addition to second line therapy. This clinical trial was stopped prematurely due to lack of efficacy on sputum smears, M tb culture, or chest radiograph changes. 
     We administered nebulized rIFN-γ to 5 patients with persistent acid fast bacilli (AFB) smear and culture positive multiple-drug resistant  tuberculosis  (TB) (Condos et al., (1997)  Lancet  349(9064): 1513-5). Patients received aerosol r IFN-γ, 500 mcg, 3 times weekly for 4 weeks (total study dose 6000 mcg). Therapy was tolerated well with minimal side effects. At the end of the 4 weeks, 4 of the 5 patients were sputum AFB-smear negative and the time to positive culture increased indicating a reduced organism load after treatment. Interestingly, in these reported and in additional patients, PEFR performed 1 hour after treatment improved by 6% (n=10). 
     Interferons are a family of naturally-occurring proteins that are produced by cells of the immune system. Three classes of interferons have been identified, alpha, beta and gamma. Each class has different effects though their activities overlap. Together, the interferons direct the immune system&#39;s attack on viruses, bacteria, tumors and other foreign substances that may invade the body. Once interferons have detected and attacked a foreign substance, they alter it by slowing, blocking, or changing its growth or function. 
     Interferon-γ is a pleiotropic cytokine that has specific immune-modulating effects, e.g. activation of macrophages, enhanced release of oxygen radicals, microbial killing, enhanced expression of MHC Class II molecules, anti-viral effects, induction of the inducible nitric oxide synthase gene and release of NO, chemotactic factors to recruit and activate immune effector cells, downregulation of transferrin receptors limiting microbial access to iron necessary for survival of intracellular pathogens, etc. Genetically engineered mice that lack interferon-γ or its receptor are extremely susceptible to mycobacterial infection. 
     Recombinant IFN-γ was administered to normal volunteers and cancer patients in the 1980s through intramuscular and subcutaneous routes. There was evidence of monocyte activation, e.g. release of oxidants. Jaffe et al. reported rIFNγ administration to 20 normal volunteers. (See, Jaffe et al.,  J Clin Invest.  88, 297-302 (1991)) First, they gave rIFN-γ 250 μg subcutaneously noting peak serum levels at 4 hours and a trough at 24 hours. 
     Several clinical trials were sponsored to evaluate IFN-γ for infectious diseases. The MDR-TB clinical trial, entitled “A Phase II/III Study of the Safety and Efficacy of Inhaled Aerosolized Recombinant Interferon-γ 1 b in Patients with Pulmonary Multiple Drug Resistant  Tuberculosis  (MDR-TB) Who have Failed an Appropriate Three Month Treatment,” enrolled 80 MDR-TB patients at several sites (Cape Town, Port Elizabeth, Durban, Mexico) and randomized them to receive aerosol rIFN-γ (500 μg MWF) or placebo for at least 6 months in addition to second line therapy. This clinical trial was stopped prematurely due to lack of efficacy on sputum smears, M tb culture, or chest radiograph changes. 
     Ziesche et al. gave rIFN-γ subcutaneously at a dose of 200 mg three times a week in addition to oral prednisone to 9/18 patients with idiopathic pulmonary fibrosis (IPF). See, Ziesche et al., (1999)  N. Eng. J. Med.,  341, 1264-1269). The results of a subsequent phase 3 clinical trial of interferon γ-1b therapy for IPF were recently published. Although this was the first clinical trial of IPF that had an adequate sample size and was a randomized, prospective, double-blind, placebo-controlled study, no significant effect on markers of physiologic function, such as forced vital capacity, was observed. However, more deaths occurred in the placebo group, and survival was significantly better for a subset of patients who received interferon γ-1b therapy and had a forced vital capacity of 55% or greater and diffuse lung capacity for carbon monoxide of 35% or greater of the normal predicted values. The discordance between disease progression and survival in that study remains to be explained. One possibility is that interferon γ-1b therapy improves host defense against infection and diminishes the severity of lower respiratory tract infection when it complicates the clinical course of patients with IPF. This possibility is supported by the observation by Strieter et al. that the interferon-inducible CXC chemokine, I-TAC/CXCL11, which has antimicrobial properties, was significantly up-regulated in plasma and bronchoalveolar lavage (BAL) fluid in individuals who received interferon γ-1b compared to those who received placebo, whereas profibrogenic cytokines were generally not significantly altered by interferon γ-1b therapy over a 6-month treatment period. (See, Strieter et al.,  Am J Respir Crit Care Med.  (2004). One possibility to explain the lackluster results is inadequate levels of drug delivered to the lung interstitium with current dosing strategies. 
     Interferon-γ is as essential for human host response to Mtb as it is in knockout mouse models. In a report of a patient with severe interferon-γ deficiency who developed disseminated TB, complete healing of skin, bone, pleural and renal lesions was achieved with subcutaneous IFN-γ1b three times a week at 50 μg for 34 weeks and 75 μg for 16 weeks (Seneviratne et al.,  Thorax  (2007) 62:97-99). In another patient with autoimmune type I diabetes, primary hypothyroidism, and fatal disseminated Mtb infection, autoantibodies to interferon-γ that were capable of blocking in vitro responses to IFN-γ by peripheral blood mononuclear cells from normal donors were detected (Doffinger et al.,  Clin Inf Dis  (2004) 38:e10-e14). Treatment of disseminated nontuberculous mycobacterial infection with subcutaneous IFN-γ has been clinically successful with correction of in vitro antigen-stimulated PBL responses (Holland et al.,  N Engl J Med  (1994) 330: 1348-55). A patient with disseminated skin lesions due to  M. abscessus  after chemotherapy for essential thrombocytosis had complete clearing of the skin after 7 months of subcutaneous IFN-γ, and a mid-course biopsy showed prominent MHC Class II immunostaining (Colsky et al.,  Arch Dermatol  (1999) 135:125-127). 
     An open-label study of nebulized IFN-γ1b in 5 patients with MDR-TB showing clearing of the sputum after 1 month, as well as a second study in 10 TB patients showing enhanced IFN-γ signaling after one month of therapy with nebulized IFN-γ1b was previously reported (Condos et al.,  Lancet  (1997) 349:1513-1515; Condos et al.,  Infect Immun  (2003)71: 2058-2064.). The IFN-γ inducible IP-10 was increased in BAL following nebulized IFN-γ1b but that nitric oxide synthase 1 (NOS2) was not increased further since over two-thirds of alveolar macrophages expressed this in active pulmonary TB at onset of treatment (Raju et al.,  Infect Immun  (2004) 72: 1275-1283; Nicholson et al.,  J Exp Med  (1996) 183: 2293-2302). Similar results were reported for 8 MDR-TB patients treated with intramuscular IFN-γ1b over a 6-month period (Suárez-Méndez et al.,  BMC Infect Dis  (2004) 4:44). In a further study, nebulized interferon-α was given for 2 months as an adjunct in a randomized controlled clinical trial in 20  tuberculosis  patients (Giosué et al.,  Am J Respir Crit Care Med  (1998) 158:1156-1162). Improvements in fever,  M tuberculosis  number in the sputum, abnormalities in CT-scans, and more significant decreases in BALF IL-1β, IL-6, and TNF-α were noted in the IFN-α group (Palmero et al.,  Int J Tuberc Lung Dis  (1999) 3: 214-218). In a clinical trial of interleukin-2 adjunctive therapy performed in Uganda, 110 TB patients were randomized to IL-2 subcutaneously twice/day for the first 30 days in addition to DOTS versus DOTS alone. Seventeen percent versus 30% sputum conversion, respectively, was observed at 4 weeks (Johnson et al.,  Am J Respir Crit Care Med  (2003) 168: 185-191). IL-2 might have upregulated CD4+CD25+ T regulatory cells, which could have down-regulated the immune system and impaired clearance of organisms. 
     The inflammatory response in the lung in TB may include an increase in neutrophils, particularly in radiographically abnormal areas (Law et al.,  Am J Respir Crit Care Med  (1996) 153: 799-804). These involved segments have BAL cell supernatants and fluid that contain increased levels of IL-1β, IL-6, TNF-α, and IL-8, a chemokine for neutrophils (Law et al.,  Am J Respir Crit Care Med  (1996) 153: 799-804; Zhang et al.,  J Clin Invest  (1995) 95: 586-592). Mtb and its cell wall components lipoarabinomannan (LAM), lipomannan (LM), and phosphoinositolmannoside (PIM) stimulated IL-8 protein release and mRNA expression in vitro from alveolar macrophages (Zhang et al.,  J Clin Invest  (1995) 95: 586-592). In a series of 30 pulmonary  tuberculosis  patients undergoing bronchoalveolar lavage, a sub-group had minimal disease with increased BAL lymphocytes with IFN-γ release, and a sub-group with cavitary  tuberculosis  had exaggerated percent and numbers of neutrophils with increased TNF-α and IL-1-β in BALF (Hougardy et al.,  Am J Respir Crit Care Med  (2007) 176: 409-416). Neutrophils kill Mtb by oxidative and nonoxidative mechanisms probably by release of alpha defensins and bactericidal permeability increasing protein (Zhang et al.,  J Clin Invest  (1995) 95: 586-592). Recently, human neutrophil peptides 1-3 were shown to kill Mtb and cathelicidin LL-37 and lipocalin 2 restricted growth of the organism, with the latter in an iron-dependent manner (Martineau et al.,  J Clin Invest  (2007) 117: 1988-1994). Monocytes and macrophages are recruited to the site of Mtb inflammation by the release of the CC chemokines CCR2, monocyte chemotactic protein-1, and macrophage inflammatory protein-1α and -1β (Schwander et al.,  J Infect Dis  (1996) 173: 1267-1272). Other mechanisms of Mtb killing may be modulated by IFN-γ include autophagy and ubiquitin in lysosomes (Alonso et al.,  Proc Natl Acad Sci  (2007) 104: 6031-6036). IFN-γ-inducible chemokines CCXCL-9, -10, and -11 were increased in lung granulomas of cynmologus macaques infected with Mtb, and TNF-α, IFN-γ, and CD3+ cells were also abundant (Fuller et al.,  Infect Immun  (2003) 71:7023-7034). CXCL-11 was also increased in BAL fluid from patients with idiopathic pulmonary fibrosis treated with subcutaneous IFN-γ1b (Strieter et al.,  Am J Respir Crit Care Med  (2004) 170: 133-140). 
     Mtb usually produces an environment of immunological depression or stasis with reduced peripheral blood lymphocyte response to Mtb antigens that improves after treatment and becomes polarized to a Th1 profile of cytokines (Lienhardt et al.,  Eur J Immunol  (2002) 32: 1605-1613). Treg or CD4+CD25+ cells are expanded in active  tuberculosis  and decline after treatment with concomitant return of T cell responses to PPD and release of IFN-γ (Condos et al.,  Am J Respir Crit Care Med  (1998) 157:729-735). BAL lymphocytes and macrophages have increased mRNA transcripts for IFN-γ and IL-12 at the onset of active pulmonary  tuberculosis  (Robinson et al.,  Am J Respir Crit Care Med  (1994) 149: 989-993). IL-18 synergizes with IL-12 in inducing IFN-γ, and correlates with fever and extent of radiographic tuberculous disease (Yamada et al.,  Am J Respir Crit Care Med  (2000) 161:1786-1789). 
     BRIEF SUMMARY OF THE INVENTION 
     In one aspect, the present invention features a method of treating a pulmonary disease in a subject suffering from a pulmonary disease, comprising administering an aerosolized interferon in a therapeutically effective amount. In some embodiments, the pulmonary disease is  tuberculosis . In particularly preferred embodiments, the  tuberculosis  is resistant to multiple drugs (MDR-TB). In one embodiment, the improved symptoms of the pulmonary disease may be measured by one or more of a decrease in fever incidence or severity, a reduction in sputum production of 5, 10, 20, 25, 33, 50 or even 75% over a period of 2, 4, 6, 8, 10, 12, 16, or 24 weeks, a reduction in wheezing of 5, 10, 20, 25, 33, 50 or even 75% over a period of 2, 4, 6, 8, 10, 12, 16, or 24 weeks and a reduction in conversion of sputum cultures to test positive for  tuberculosis  pathogens. In other embodiments, the improved symptoms may include one or more of a reduction in tiredness, a reduction in the occurrence of night sweats of, for instance 10, 20, 25, 50 or even 75%, an improvement in appetite, a reduction in the frequency or duration of coughs, or a reduction in dyspnea. In other embodiments, the improved symptoms may be measured physiologically such as one or more of an increase in the number of lymphocytes present in biological samples obtained by bronchoalveolar lavage, a decrease in the number of neutrophils present in biological samples obtained by bronchoalveolar lavage, or a reduction in the amount of inflammatory cytokines present in biological samples obtained by bronchoalveolar lavage. The decreases or increases in each instance of neutrophils, lymphocytes or inflammatory cytokines may be on the order of 5%, 10%, 15%, 20%, 25%, 50%, 75% or even 100% or 200%. The interferon may be interferon α, interferon β or interferon γ. 
     In another embodiment, the subject suffering from the pulmonary disease, such as, for instance,  tuberculosis , is unresponsive to treatment with one or more other therapeutics. Furthermore, in patients that are not sufficiently responsive to other therapeutics, it is a further aspect of the invention to combine treatment of these patients with an aerosolized interferon while maintaining treatment with one or more other therapeutic regimens, including but not limited to treatment with one or more antibiotic agents. Particularly useful antibiotics include isoniazid and rifampin. 
     In some embodiments, aerosolized interferon is administered in an amount so that interferon present in the lungs is elevated from a baseline level to a level that is believed to be therapeutic. The absolute amount of interferon that is administered in order to achieve an amount in the lungs that is believed to be therapeutic may vary according to such factors as the efficiency of delivery of the particular nebulizer used or the breathing patterns of the subject receiving the interferon therapy. In many embodiments, a sufficient amount of interferon is delivered to the lungs such that there is a 1.5×, 2×, 3×, 5×, 10×, 20×, 30×, 40×, 50× or even a 100× or more increase in interferon present in a bronchoalveolar lavage sample obtained from a subject after at least one treatment in comparison to the amount of interferon present in a bronchoalveolar lavage sample obtained from a subject before any interferon treatment. For instance, in some embodiments the baseline amount of interferon present in a bronchoalveolar lavage sample obtained from a subject before any interferon treatment may be about 10 pg/ml, 5 pg/ml, 1 pg/ml, 0.5 pg/ml or even less. In some embodiments, about one hour after a single dose treatment with interferon according to the present invention, the amount of interferon present in a bronchoalveolar lavage sample obtained from a subject may be about 15 pg/ml, 20 pg/ml, 25 pg/ml, 30 pg/ml, 40 pg/ml or even more. 
     In more specific embodiments, aerosolized interferon is administered in doses ranging from about 2 μg, 5 μg, 10 μg, 20 μg, 30 μg, 50 μg, 75 μg or 100 μg to about 750 μg or 1000 μg and may be given in a nebulizer once, twice, three or four times per week, preferably the dose may range from about 150 μg to 300 μg, 400 μg, 500 μg or even 600 μg. In another embodiment, a dose of 200 μg is given in a nebulizer three times per week. Lower doses may be given depending on the efficiency of the nebulizer or the type of inspiration breathing. When it is desired to treat patients with a combination of interferon-γ therapy and other treatment modalities, the aerosolized interferon-γ will be titrated to ensure no undesirable effects are experienced by these patients. Furthermore, when combination therapy is a consideration, the other agents may be delivered by a means in which they are considered to be the most effective. This may include intravenous, intramuscular, subcutaneous, or may be combined with IFN-γ and delivered as an aerosol. Other objects and advantages will become apparent from a review of the ensuing detailed description taken in conjunction with the following illustrative drawing. 
    
    
     
       BRIEF DESCRIPTION OF THE DRAWINGS 
         FIG. 1  describes a typical tidal breathing pattern. 
         FIG. 2  describes a reduction in inspiratory flow and a greatly prolonged inspiratory time characteristic of a method of slow and deep inspiration as compared to tidal breathing. 
         FIG. 3  represents a deposition pattern in a human subject inhaling 4.5 μm aerosols using the slow and deep breathing pattern. The images demonstrate minimal deposition of aerosol (less than 10%) in the upper airways illustrated by the small amount of activity in the stomach. The deposition image represents radiolabeled aerosol deposited in the lung periphery of a human subject after 3 breaths using the slow and deep pattern with an inspiratory time of approximately 8 seconds. 
         FIG. 4  is an illustrative scan in the same subject following 20 breaths of tidal breathing of 1.5 μm particles which is the present standard mode of inhalation. Analysis of the images indicates that the slow and deep method of breathing which incorporates the use of large particles, slow inspiration and a prolonged inspiratory time is 51 times more efficient per breath in depositing aerosol particles in the lung. 
         FIG. 5  represents the protocol followed to assess the efficacy of interferon-γ in  tuberculosis  patients. One group of evaluable patients were given standard therapy supplemented by nebulized interferon-γ (NEB), another group received standard therapy alone (DOTS), and a third group received standard therapy supplemented by subcutaneous interferon-γ (SUB). 
         FIG. 6  represents graphically that over a sixteen week period of time, there was a reduction in reported fever among patients in all of the three treatment groups described in  FIG. 5 . However, the difference was most pronounced in the group treated with standard therapy supplemented by nebulized interferon-γ. p&lt;0.05 at weeks 4 and 8. 
         FIG. 7  represents graphically that over a sixteen week period of time, there was a reduction in sputum production among patients in all of the three treatment groups described in  FIG. 5 . However, the difference was most pronounced in the group treated with standard therapy supplemented by nebulized interferon-γ. p&lt;0.05 at week 8 compared to standard therapy (DOTS) alone and p&lt;0.05 at week 16 with combined interferon-γ therapy compared to standard therapy (DOTS) alone. 
         FIG. 8  demonstrates graphically that over a sixteen week period of time, there was a reduction in wheezing among patients in all of the three treatment groups described in  FIG. 5 . However, the difference more pronounced in the group treated with standard therapy supplemented by nebulized interferon-γ than in the group treated with standard therapy alone. 
         FIG. 9  demonstrates graphically that over a sixteen week period of time, there was increased conversion of sputum cultures to negative for  tuberculosis  pathogens in all of the three treatment groups described in  FIG. 5 . However, the difference was more pronounced in the group treated with standard therapy supplemented by nebulized interferon-γ than in the group treated with standard therapy alone. 
         FIG. 10  represents graphically that over a sixteen week period of time, there was a reduction in reported patients having a poor appetite in patients receiving nebulized interferon-γ therapy and standard therapy. However, the reduction in poor appetite was most pronounced in the group treated with standard therapy supplemented by nebulized interferon-γ. 
         FIG. 11  represents graphically that over a sixteen week period of time, there was a reduction in reported patients experiencing night sweats in patients receiving nebulized interferon-γ therapy and standard therapy. However, the reduction in night sweats was most pronounced in the group treated with standard therapy supplemented by nebulized interferon-γ. 
         FIG. 12  represents graphically that over a sixteen week period of time, there was a reduction in patients reporting tiredness both in patients receiving nebulized interferon-γ therapy and standard therapy. However, the reduction in tiredness was most pronounced in the group treated with standard therapy supplemented by nebulized interferon-γ. 
         FIG. 13  represents  M tuberculosis  sputum smear conversion. At 4 weeks, there was a higher Mtb smear conversion rate in the NEB IFN-γ1b group compared to the other two treatment groups combined (p&lt;0.05). 
         FIG. 14  represents the change in symptoms over 16 weeks comparing DOTS (dashed line) to DOTS plus IFN-γ1b groups (solid and dotted lines). A). IFN-γ1b significantly (p&lt;0.05) reduced fever at 4 weeks. B). IFN-γ1b significantly reduced episodes of night sweats at 4 weeks. C). IFN-γ1b significantly reduced wheeze at 4 weeks. (All p&lt;0.05). 
         FIG. 15  represents reduction in inflammatory cytokines in 24 hour BAL supernatants by Nebulized IFN-γ1b comparing baseline to 16 weeks in ng/ml. A). IL-1β. DOTS vs. NEB IFN-γ1b plus DOTS, p&lt;0.001. B). IL-6. DOTS vs. NEB IFN-γ1b plus DOTS, p&lt;0.04. C). IL-8. DOTS vs. NEB IFN-γ1b plus DOTS, p&lt;0.02. D). IL-10. DOTS vs. NEB IFN-γ1b plus DOTS, p&lt;0.02. 
     
    
    
     DETAILED DESCRIPTION 
     Before the present methods and treatment methodology are described, it is to be understood that this invention is not limited to particular methods, and experimental conditions described, as such methods and conditions may vary. It is also to be understood that the terminology used herein is for the purpose of describing particular embodiments only, and is not intended to be limiting, since the scope of the present invention will be limited only by the appended claims. 
     As used in this specification and the appended claims, the singular forms “a”, “an”, and “the” include plural references unless the context clearly dictates otherwise. Thus for example, references to “the method” includes one or more methods, and/or steps of the type described herein and/or which will become apparent to those persons skilled in the art upon reading this disclosure and so forth. 
     Unless defined otherwise, all technical and scientific terms used herein have the same meaning as commonly understood by one of ordinary skill in the art to which this invention belongs. Although any methods and materials similar or equivalent to those described herein can be used in the practice or testing of the present invention, the preferred methods and materials are now described. All publications mentioned herein are incorporated herein by reference to disclose and described the methods and/or materials in connection with which the publications are cited. 
     DEFINITIONS 
     The phrase “unresponsive to treatment” means a patient population that is unresponsive to conventional prior art treatments. 
     Vital capacity (VC) means the total air that can be moved in and out of the lungs. 
     Fev1 means the forced expiratory volume of air in one second. 
     Fev1/FVC ratio means the ratio of forced expiratory volume in one second and forced vital capacity. 
     The term “pulmonary disease” refers to any pathology affecting at least in part the lungs or respiratory system. The term is meant to encompass both obstructive and non-obstructive conditions such as, for instance, asthma, emphysema, chronic obstructive pulmonary disease, pneumonia,  tuberculosis , and fibrosis in all its forms including but not limited to idiopathic pulmonary fibrosis. 
     The term “obstructive pulmonary disease” refers to any pulmonary disease that results in reduction of airflow in or out of the respiratory system. The reduction in airflow relative to normal may be measured in total or over a finite time, for example, by FVC or FEV1. The term “idiopathic pulmonary fibrosis” (IPF), synonymous with “cryptogenic fibrosing alveolitis” (CFA) is the clinical term for a major subgroup of the idiopathic interstitial pneumonias, and it describes a disease characterized by idiopathic progressive interstitial disease with a mean survival from the onset of dyspnea of 3 to 6 years. A diagnosis of idiopathic pulmonary fibrosis is made by identifying usual interstitial pneumonia (UIP) on lung biopsy. The histological pattern is characterized by heterogeneity that includes patchy chronic inflammation (alveolitis), progressive injury (small aggregates of proliferating myofibroblasts and fibroblasts, termed fibroblastic foci) and fibrosis (dense collagen and honeycomb change). 
     The term “asthma” refers to a common disease that involves inflammation (cellular injury) and narrowing of the airways leading to the lungs. Asthma occurs in children and adults. Childhood asthma may continue into adolescence and adulthood, but some adults who develop asthma did not have asthma when they were younger. Millions of people worldwide are affected by asthma, which has become more common in recent years. 
     The term “ tuberculosis ” refers to a common infectious disease caused by mycobacteria, primarily  Mycobacterium tuberculosis. Tuberculosis  most commonly affects the lungs but can also affect the central nervous system, the lymphatic system, the circulatory system, the genitourinary system, bones, joints and even the skin. Other mycobacteria such as  Mycobacterium bovis, Mycobacterium africanum, Mycobacterium canetti  and  Mycobacterium microti  can also cause  tuberculosis , but these species do not usually infect healthy adults. 
     By “slow and deep breathing” is meant any breathing pattern wherein the time of inspiration is longer than the time of expiration. Such a pattern features a duty cycle (time of inspiration/total time of breath) of greater than 0.5. During normal tidal breathing the duty cycle is always less than or near 0.5. That is, the time of inspiration is always less than the time for expiration. In disease states, the duty cycle decreases in obstructive disease and for restrictive disorders it is likely to be still less than 0.5. “Slow and deep” breathing may feature an I/E ratio, time of inspiration relative to expiration of greater that 1, and in some instances the ratio may approach 8 or 9 thereby yielding a duty cycle of 0.8 or 0.9 
     Five multiple-drug resistant  tuberculosis  patients were treated with nebulized IFN-γ1b while continuing their failing second-line regimens at a dose of 500 μg three times weekly for four weeks (Condos et al.,  Lancet  (1997) 349:1513-1515). In all five patients, the sputum converted to negative, symptoms improved, and chest radiographs improved. In order to investigate the mechanisms of these responses, we used nebulized IFN-γ1b in eleven drug-sensitive  tuberculosis  patients, and found an increase in signaling molecules STAT-1, IRF-1 and IRF-9 (Condos et al.,  Infect Immun  (2003) 71: 2058-2064). We observed widespread distribution of the nebulized drug (Condos et al.,  Chest  (2004) 125: 2146-2155). In addition, nebulized IFN-γ1b induced IP-10 downstream from these signaling molecules, but not inducible nitric oxide synthase (iNOS) (Raju et al.,  Infect Immun  (2004) 72: 1275-1283). NO has been identified as a mechanism of mycobacterial killing, while mycobacteria can also be eliminated by autophagy, apoptosis, cytotoxic CD8+ cells, alpha defensins from neutrophils, and phagosomal-lysosomal rupture with subsequent cytosolic demise (Klingler et al.,  Infect Immun  (1997) 5:5272-5278; Martineau et al.,  J Clin Invest  (2007) 117: 1988-1994; Van der Wel et al.,  Cell  (2007) 129: 1287-1298; Gutierrez et al.,  Cell  (2004) 119: 753-766). However, mycobacteria have evolved virulence factors to persist in macrophages, possibly disrupting the interferon-γ signaling pathways. Therefore, to determine if IFN-γ1b could augment the host response, we conducted a 4-month randomized, controlled clinical trial with IFN-γ1b at 200 μg/day for three days/week with three arms: nebulized IFN-γ1b or subcutaneous IFN-γ1b with DOTS versus DOTS alone. We followed these for smear and culture conversion, clinical signs, immunological parameters and cytokines released by cells recovered by bronchoalveolar lavage. 
     A randomized, controlled clinical trial of directly observed therapy (DOTS) versus DOTS supplemented with nebulized or subcutaneously administered interferon-γ1b over 4 months to patients with cavitary pulmonary  tuberculosis  was performed. Bronchoalveolar lavage and blood were sampled at 0 and 4 months. All study subjects had sputum smears and cultures that were positive for  Mycobacterium tuberculosis  that was sensitive to at least 3 of 4 drugs. 
     96 cavitary  tuberculosis  patients were enrolled, and 89 met inclusion criteria. There was a significant (p&lt;0.05) difference in the rate of clearance of Mtb from the sputum smear at 4 weeks for the nebulized interferon-γ1b adjuvant group compared to DOTS alone or DOTS with subcutaneous interferon-γ1b. In addition, there was significant (p&lt;0.05) reduction in the prevalence of fever, wheeze, and night sweats at 4 weeks among patients receiving interferon-γ1b versus DOTS. There was a significant decline in levels of inflammatory cytokines IL-1β, IL-6, IL-8, and IL-10 in 24-hour BAL supernatants only in the nebulized interferon-γ1b group from baseline to week 16. Both interferon-γ1b groups had a significant increase in blood lymphocyte response to PPD at 4 weeks. Interferon-γ1b adjuvant therapy plus DOTS in cavitary pulmonary  tuberculosis  improves clearance of Mtb from the sputum, improve constitutional symptoms, and reduce inflammatory cytokines at the site of disease. 
     Interferon-γ Treatment of  Tuberculosis    
     Bilateral cavitary  tuberculosis  and/or a persistently positive acid fast sputum smear at 2 months of therapy are both risk factors for treatment failure and/or relapse in  tuberculosis  patients. The extent of pulmonary disease (bilateral and cavitary) and the initial sputum response to four drug initiation phase therapy have a major impact on risk of relapse. Different strategies are required for managing these special risk patients. We investigated the effects of additive immunotherapy with recombinant gamma interferon (rIFN-γ) via subcutaneous injection and the novel aerosol delivery route. 
     An intact Type 2 interferon system is critical for an effective response to mycobacterial infections. The present protocol demonstrates an accelerated healing process in patients who demonstrate unsatisfactory response to traditional therapy for  tuberculosis  following exogenous recombinant interferon therapy. Aerosolized rIFN-γ has previously been shown to induce signal transduction in BAL cells and is a well tolerated delivery route. Subcutaneous injection results in peripheral monocyte activation and improved early clinical outcome in small groups of patients with both non-tuberculous (NTM) and tuberculous mycobacterial infection. 
     The mechanism of action of rIFN-γ in providing therapy for  tuberculosis  patients is thought to be through of the host TH1 immune response and macrophage activation. rIFN-γ provides in many instances a decrease in time to sputum conversion, prolongs time to mycobacterial detection in sputum culture, accelerates chest cavity closure by promoting healing thereby preventing parenchymal fibrosis, and provides earlier improvement in clinical parameters. 
     We conducted a randomised control trial at two recruitment sites, one in New York and one in Cape Town, South Africa. 100 patients were enrolled. For patients randomized to either of the treatment arms, recombinant interferon gamma ACTIMMUNE®, InterMune, Inc, Brisbane, Calif.) was delivered 3 times weekly either via the high efficiency AEROECLIPSE® nebuliser (Trudell Medical International, Canada) at a dose of 200 mcg or via subcutaneous injection at the equivalent 200 mcg dose strength. Immunotherapy dosing continued for a 16 week period with strict DOTS adherence monitoring. 
     Intention to treat analysis was performed on 100 subjects. While cough and improvement in appetite failed to show a significant improvement in the treatment groups versus standard treatment (DOTS), there were significant improvements seen in fever, p=0.04 at 12 weeks in combined rIFN treated patients versus standard treatment (DOTS) alone and in wheeze, p=0.03 at 4 weeks in combined rIFN treated versus standard treatment (DOTS) alone. Sputum conversion rates were better at 4 weeks in the Aerosol gamma treated group compared to standart treatment (DOTS) alone or standard treatment (DOTS) plus subcutaneous rIFN, p=0.05. 
     Mechanisms of Action of Interferon-γ 
     Signal transduction pathways have been recently studied in cultured cells delineating a temporal regulatory pathway for the response to IFN-γ (Vilcek et al., (1994)  Int Arch Allergy Immunol  104(4): 311-6; Young et al., (1995)  J Leukoc Biol  58(4): 373-81). The first events take place when added IFN-γ binds to the extracellular domain of its receptor, and leads to tyrosine phosphorylation of preexisting signal transducer and activator of transcription 1 (STAT-1) at the intracellular domain of the receptor. Only tyrosine-phosphorylated STAT-1 is activated, which allows it to form homodimers (or heterodimers) and bind to a specific DNA sequence. 
     Upon translocating to the nucleus and binding to its cognate regulatory element in the promoters of many genes, STAT-1 activates transcription. STAT-1 can work with other preexisting transcription factors that are constitutively active, and thus transcription of some genes is maximally induced without a need for new protein synthesis. Other genes are regulated by STAT-1 together with transcription factors that are newly synthesized in response to IFN-γ. The IRF-1 gene, which also encodes a transcription factor, is also regulated by STAT-1 in response to IFN-γ (Pine, R. (1992)  J Virol  66(7): 4470-8; Pine et al., (1994)  Embo J  13(1): 158-67; Pine et al., (1990)  Mol Cell Biol  10(6): 2448-57). It should be noted that the promoter of the IRF-1 gene also contains binding sites for nuclear factor kappa B (NF-kB), which mediates tumor necrosis factor alpha (TNF-α)-activated transcription of the IRF-1 gene (Harada et al., (1994)  Mol Cell Biol  14(2): 1500-9; R. Pine, unpublished). 
     Once the IRF-1 protein has been synthesized, it activates transcription of a temporally downstream set of genes. IRF-1 has been shown to regulate the IFN-γ-induced expression of key genes involved in antigen processing and presentation, including TAP-1, LMP-2, and HLA-A and HLA-B class I major histocompatibility antigens (Johnson et al., (1994)  Mol Cell Biol  14(2): 1322-32; White et al., (1996) Immunity 5(4): 365-76). 
     IRF-1 is phosphorylated, and manipulating the extent of phosphorylation affects its DNA-binding activity (Pine et al., (1990)  Mol Cell Biol  10(6): 2448-57; Nunokawa et al., (1994)  Biochem Biophys Res Commun  200(2): 802-7). However, there is no clear evidence that phosphorylation of IRF-1 is regulated in vivo. STAT-1 activity is dependent on tyrosine phosphorylation and is affected by the extent of serine phosphorylation. However, the abundance of latent STAT-1 is also regulated. Cells treated overnight with IFN-γ have increased levels of STAT-1 protein, though the tyrosine phosphorylation and DNA-binding activity are only slightly greater than in unstimulated cells (Pine et al., (1994)  Embo J  13(1): 158-67). 
     The study of gene expression and its regulation can provide information on other aspects of the overall immunological state. Specifically, functional effects of cytokine changes can be confirmed by determination of specific DNA-binding activities. For example, in T cells IL-12 leads to activation of STAT-4, while IL-4 leads to activation of STAT-6, the occurrence of Th1 and Th2 responses or a shift from one to the other may be reflected in the profile of STAT DNA-binding activities detected at a particular time (Darnell (1996)  Recent Prog Horm Res  51:391-403; Ivashkiv, L. B. (1995)  Immunity  3(1): 1-4). 
     Aerosolized Interferon-γ Treatment 
     Recently, a small randomized trial of patients with IPF were treated with subcutaneous interferon-γ (IFN-γ) (Ziesche et al (1999)  N. Engl. J Med.  341:1264-1269). Analysis of transbronchial biopsy specimens obtained prior to and six months into therapy with IFN-γ, demonstrated that abnormal pretreatment increases in the profibrotic cytokines transforming growth factor-β (TGF-β) and connective-tissue growth factor (CTGF) were significantly reduced after treatment with IFN-γ (Ziesche et al. (1999) supra). Patients treated with prednisolone alone had no change in levels of TGF-β and CTGF. 
     Delivery of Interferons 
     Aerosol Delivery 
     In a broad aspect of the invention, a method of treating pulmonary diseases including  tuberculosis , asthma and idiopathic pulmonary fibrosis (IPF) in a subject suffering from the pulmonary disease, comprising administering an aerosolized interferon such as interferon-γ in a therapeutically effective amount wherein the symptoms of the pulmonary disease are improved or ameliorated. In a preferred embodiment, aerosolized IFN-γ may be used for treating subjects suffering from  tuberculosis  wherein the subjects are insufficiently responsive to treatment with one or more antibiotics such as isoniazid and rifampicin. 
     Interferons such as IFN-γ may be administered by several different routes, including intravenous, intramuscular, subcutaneous, intranasally and via aerosol. However, when treating a pulmonary process alone, delivery of medication directly to the lung avoids exposure to other organ systems. Effective administration of 500 μg IFN-γ via aerosol three times per week for two weeks has been shown by bronchoalveolar lavage (BAL) analysis in normal patients to result in increased levels of IFN-γ post-administration. Likewise, about 500 micrograms of interferon-β three times per week and about 0.25 mg of interferon-α three times per week is thought to be effective. 
     It is an object of the present invention to deliver the interferon such as interferon-γ via the pulmonary route of administration. Interferons like IFN-γ are delivered to the lungs of a mammal while inhaling and traverses across the lung epithelial lining to the blood stream. (Other reports of this include Adjei et al., PHARMACEUTICAL RESEARCH, VOL. 7, No. 6, pp. 565-569 (1990); Adjei et al.,  International Journal of Pharmaceutics,  63:135-144 (1990); Braquet et al.,  Journal of Cardiovascular Pharmacology , Vol. 13, suppl. 5, s. 143-146 (1989); Hubbard et al.,  Annals of Internal Medicine, Vol. III, No.  3, pp. 206-212(1989); Smith et al.,  J. Clin. Invest ., Vol. 84, pp. 1145-1146 (1989); Oswein et al., “Aerosolization of Proteins”, Proceedings of Symposium on Respiratory Drug Delivery II, Keystone, Colo., March, 1990; and Platz et al., U.S. Pat. No. 5,284,656. Contemplated for use in the practice of this invention are a wide range of mechanical devices designed for pulmonary delivery of therapeutic products, including but not limited to nebulizers, metered dose inhalers, and powder inhalers, all of which are familiar to those skilled in the art. 
     Some specific examples of commercially available devices suitable for the practice of this invention are the ULTRAVENT® nebulizer, manufactured by Mallinckrodt, Inc., St. Louis, Mo.; the ACORN II® nebulizer, manufactured by Marquest Medical Products, Englewood, Colo.; the VENTOLIN® metered dose inhaler, manufactured by Glaxo Inc., Research Triangle Park, N.C.; and the SPINHALER® powder inhaler, manufactured by Fisons Corp., Bedford, Mass., MISTYNEB®, manufactured by Allegiance, McGraw Park, Ill.; AEROECLIPSE®, manufactured by Trudell Medical International, Canada. 
     All such devices require the use of formulations suitable for the dispensing of protein. Typically, each formulation is specific to the type of device employed and may involve the use of an appropriate propellant material, in addition to the usual diluents, adjuvants and/or carriers useful in therapy. Also, the use of liposomes, microcapsules or microspheres, inclusion complexes, or other types of carriers is contemplated. Chemically modified protein may also be prepared in different formulations depending on the type of chemical modification or the type of device employed. 
     Formulations suitable for use with a nebulizer, either jet or ultrasonic, may typically comprise protein dissolved in water at a concentration of about 0.1 to 25 mg of biologically active protein per mL of solution. The formulation may also include a buffer and a simple sugar (e.g., for protein stabilization and regulation of osmotic pressure). The nebulizer formulation may also contain a surfactant, to reduce or prevent surface induced aggregation of the protein caused by atomization of the solution in forming the aerosol. 
     Formulations for use with a metered-dose inhaler device may generally comprise a finely divided powder containing the protein suspended in a propellant with the aid of a surfactant. The propellant may be any conventional material employed for this purpose, such as a chlorofluorocarbon, a hydrochlorofluorocarbon, a hydrofluorocarbon, or a hydrocarbon, including trichlorofluoromethane, dichlorodifluoromethane, dichlorotetrafluoroethanol, and 1,1,1,2-tetrafluoroethane, or combinations thereof. Suitable surfactants include sorbitan trioleate and soya lecithin. Oleic acid may also be useful as a surfactant. 
     Formulations for dispensing from a powder inhaler device may comprise a finely divided dry powder containing protein and may also include a bulking agent, such as lactose, sorbitol, sucrose, or mannitol in amounts which facilitate dispersal of the powder from the device, e.g., 50 to 90% by weight of the formulation. The protein should most advantageously be prepared in particulate form with an average particle size of less than 10 μm (or microns), most preferably 0.5 to 5 μm, for most effective delivery to the distal lung. 
     It is a goal of aerosol delivery to significantly increase the delivery of therapeutic agents such as interferons, including IFN-γ, to the deep lung in humans. A particularly preferred approach to breathing slow and deep inspiration may, when compared with standard (tidal breathing), increase deposition efficiency in the lung periphery by a factor of up to about 50 times. 
     The specific pattern of breathing using a method of slow and deep inspiration as compared to tidal breathing ( FIG. 1 ) describes a reduction in inspiratory flow and a greatly prolonged inspiratory time. This pattern is shown in  FIG. 2 . The slow inspiration allows aerosol particles to bypass the upper airways thus making them available for deposition in the lung. The prolonged inspiration allows for suitable settling of aerosols in the lung periphery. The prolongation of the inspiratory time and the advanced settling promotes “inspiratory deposition” before remaining particles can be exhaled. It is possible under these circumstances to have almost 100% of the inhaled particles depositing before exhalation begins. This process can be further enhanced by using particles that are relatively large (e.g., about 4.5 μm) that ordinarily would deposit in the oropharynx. The prolonged inspiration of slow and deep breathing is particularly suited for delivery of drugs to the lungs of patients whose peripheral airway pathology results in reduced deposition of conventional smaller aerosols as well as promoting avoidance of deposition in the oropharynx. Diseases of the lung periphery that may be treated by this method include, for example, idiopathic pulmonary fibrosis and emphysema. Both these entities result in enlarged airspaces that result in minimal deposition during tidal breathing. 
     This technique of inhalation and deposition can enhance the peripheral delivery of drug with the intent of promoting systemic absorption into the systemic circulation via the pulmonary capillaries.  FIG. 3  represents a deposition pattern in a human subject inhaling 4.5 μm aerosols using the slow and deep breathing pattern. The images demonstrate minimal deposition of aerosol (less than 10%) in the upper airways illustrated by the small amount of activity in the stomach. The deposition image represents radiolabeled aerosol deposited in the lung periphery of a human subject after 3 breaths using the slow and deep pattern with an inspiratory time of approximately 8 seconds.  FIG. 4  is an illustrative scan in the same subject following 20 breaths of tidal breathing of 1.5 μm particles which is the present standard mode of inhalation. Analysis of the images indicates that the slow and deep method of breathing which incorporates the use of large particles, slow inspiration and a prolonged inspiratory time is 51 times more efficient per breath in depositing aerosol particles in the lung. 
     The manufacture of devices capable of performing the slow and deep maneuver is complex, but prototype devices that perform this function are being developed and have been utilized (Profile Therapeutics, Inc. 28 State Street, Ste. 1100, Boston, Mass. 02109, which is a subsidiary of Profile Therapeutics which has its main offices in the UK). 
     Diseases of the lung parenchyma result in geometric changes in the lung periphery that can minimize the deposition of inhaled particles. Therapeutics delivered directly to the site of disease (the lung periphery) can be more effective when compared to the same agent delivered systemically. A method of slow and deep inhalation of an interferon, such as IFN-γ, aerosol is particularly suited to the treatment of disease in the alveoli of patients with obstructive disease such as pulmonary fibrosis. 
     Human deposition studies have indicated that a slow and deep inhalation method is about 50 times more efficient than conventional systems of aerosol delivery. This breathing pattern allows the design of clinical trials to test the efficacy of aerosol therapy for pulmonary diseases such as obstructive pulmonary diseases, including, for example, idiopathic pulmonary fibrosis or asthma with agents such as interferons, including, for instance, INF-γ, over a wide range of dosing to the lung periphery utilizing existing formulations of this agent. Quantities deposited in the lung are controlled by the pattern of breathing because virtually no aerosol is exhaled. 
     Nasal Delivery 
     Nasal delivery of the protein is also contemplated. Nasal delivery allows the passage of the protein to the blood stream directly after administering the therapeutic product to the nose, without the necessity for deposition of the product in the lung. Formulations for nasal delivery include those with dextran or cyclodextran. 
     Dosages 
     It is understood that as further studies are conducted, information will emerge regarding appropriate dosage levels for treatment of various conditions in various patients, and one of ordinary skill in the art, considering the therapeutic context, age and general health of the recipient, will be able to determine proper dosing. Generally, for injection or infusion, interferon-γ dosage will be between 100 μg of biologically active protein (calculating the mass of the protein alone, without chemical modification) to 750 μg (based on the same) given two to five, often three times per week. More preferably, the dosage may be about 200 to 300 μg given three times per week. Generally, for injection or infusion, interferon-α dosage is generally 100 to 750 micrograms administered one to five times per week, preferably about 500 micrograms administered three times per week. In the instance of interferon-β, dosage is generally 0.10 to 1 mg one to three times per week, preferably about 0.25 mg three times per week. The dosing schedule may vary, depending on the circulation half-life of the protein, and the formulation used. 
     Administration with Other Compounds 
     It is a further aspect of the present invention that one may administer the interferon in conjunction with one or more pharmaceutical compositions used for treating a pulmonary disease. Also, antibiotic, anti-inflammatory or immunosuppressive agents may be co-administered, eg. isoniazid, rifampin, cyclophosphamide, azathioprine or corticosteroids. Administration may be simultaneous or may be in serriatim. 
     It has been shown that after subcutaneous administration of 250 μg IFN-γ for three days, there was no increase in BAL levels of IFN-γ or alteration of alveolar macrophages, while there was upregulation of peripheral blood monocytes (Jaffe et al. (1991)  J. Clin. Invest.  88:297-302). 
     In the studies described below, patients unresponsive to conventional immunosuppressive therapy suffering from IPF were treated with aerosolized IFN-γ. 
     The invention may be better understood by reference to the following examples, which are intended to be exemplary of the invention and not limiting thereof. 
     EXAMPLES 
     The following examples are put forth so as to provide those of ordinary skill in the art with a complete disclosure and description of how to make and use the therapeutic methods of the invention and compounds and pharmaceutical compositions, and are not intended to limit the scope of what the inventors regard as their invention. Efforts have been made to ensure accuracy with respect to numbers used (e.g., amounts, temperature, etc.), but some experimental errors and deviations should be accounted for. Unless indicated otherwise, parts are parts by weight, molecular weight is average molecular weight, temperature is in degrees Centigrade, and pressure is at or near atmospheric. 
     Example 1 
     Each patient was asked to participate in a deposition study (under separate consent) of IFN-γ administered via hand-held nebulizer. This deposition study was designed to study aerosolized IFN-γ as follows. The drug was labeled with 99 mTc and administered via aerosol nebulizer. Using the “attenuation technique”, the dose of IFN-γ delivered to various regions of the lung was calculated. The initial dose of 500 μg IFN-γ was used, as this dose has previously been shown to be safe. The dose is adjusted according to deposition studies in each individual patient. A follow up bronchoscopy was performed at the end of the therapy, using the protocol described above. BAL was guided by lung deposition images, so that the areas of highest drug deposition was analyzed and compared to areas of lowest delivered drug and pre-aerosol IFN-γ samples. In this way, total dose to each area of the lung can be calculated and determined. Depending on clinical response and BAL data, dose may be adjusted to reflect optimal clinical and deposition parameters. Attempts will be made to sample similar segments pre- and post-treatment, when possible. Each patient has a follow up evaluation at one month post therapy. The results of all procedures, laboratory evaluations, radiological studies, and pulmonary physiology evaluations are documented in the patient&#39;s medical record. All study evaluations are conducted at the GCRC of NYU Medical Center. 
     One commercially available breath-actuated nebulizer was used in this study, the AeroEclipse, whose particle generation is dependent on patient breathing through the nebulizer. It produces aerosol only during inspiration. 
     IFN-γ was radiolabeled using  99m Technetium diethylene triaminepenta-acetic acid ( 99m Tc-DTPA) for both in vitro and in vivo studies. For AEROECLIPSE®, 2 vials (250 mg of IFN-γ) were used to make up a final volume of 2 mL AEROECLIPSE® was operated using a Pari Master air compressor (PART Respiratory Equipment, Inc. Monterey, Calif.). 
     The nebulizers were connected to the circuit in the manner of their clinical use. A ten stage, low flow (1.0 L/m) cascade impactor (California measurements, Sierra Madre, Calif.) was connected using a T connector (T connector cascade , Hudson Respiratory Care, Temecula, Calif.). An inspiratory filter, that prevented particles from entering the cascade impactor during expiration, was placed between the piston pump and cascade impactor. A second filter (leak filter) was placed in the system to capture the excess particles directed neither to the inspiratory filter nor to the impactor. To assess possible effects of patient ventilation a piston pump (Harvard Apparatus, Millis, Mass.) was used to simulate a patient&#39;s breathing effort. 
     Prior to inhalation the aerosol was studied on the bench under two conditions: 
     Standing cloud: The cascade impactor sampled the particles directly from the tubing at 1 Lpm without any ventilation generated by the piston pump (pump disconnected from circuit). For the purpose of generation of particles from AeroEclipse, the breath actuation valve was pressed manually for the duration of sampling. 
     During Ventilation: The Harvard pump was used to generate a sinusoidal flow in the system, analogous to the breathing of a patient. A tidal volume of 750 mL; Respiratory Rate of 20/m and Duty Cycle of 0.5 was used. 
     Aerodynamic particle distributions were measured as well as deposition on the connecting tubing to the cascade (T connector cascade ). The ballistic properties of the aerosol were quantified as the activity on the T connector cascade  and reported as a percentage of the activity captured in the cascade impactor (% Cascade). This deposition was used in predicting lung deposition. 
     Xenon imaging and attenuation studies For all the subjects IFN-γ deposition was studied using the AeroEclipse nebulizer. Xenon imaging and attenuation studies (see below) were performed. 
     Lung volume and outline studies ( 133 Xenon ( 133 Xe) equilibrium scan) The patient was seated in front of a posteriorly positioned gamma camera (Picker Dina camera; Northford, Conn.). After taking a room background image for  99m Technetium ( 99m Tc), the camera was set for  133 Xe. Breathing tidally at functional residual capacity (FRC), the patient inhaled 5-10 mCi of  133 Xe until the count rate became stable ±10% over 15 seconds. A 1.0 min gamma camera image ( 133 Xe equilibrium image) was acquired and stored in a computer (Nuclear Mac v1.2/94; Scientific Imaging Inc. Littleton, Colo.) for analysis. This image was used to define the outer margins of the lung. 
     Aerosol deposition studies After  133 Xe imaging, the camera was switched to  99m Tc. Then, the patient inhaled radiolabeled aerosolized IFN-γ from the nebulizer. For each device an expiratory filter was present to capture exhaled particles. The nebulizers were run until dry. After final inhalation, the patient drank a glass of water to wash material from the oropharynx to the stomach. Measuring stomach activity assessed upper airway deposition. 
     Lung attenuation studies (perfusion scan) Lung perfusion scanning was done to calculate the attenuation factor of the lungs. Immediately following deposition imaging, 5 mCi of  99m Tc-albumin macroaggregates were injected via a peripheral vein. It was assumed that all the macroaggregates traversed the right side of the heart and distributed in the lung proportionately to regional perfusion. A one-minute image was obtained. Perfusion was calculated as measured activity minus the activity measured on the previous (deposition) image. The lung attenuation factor was measured by dividing the amount of activity measured by the camera by the amount of activity injected. Lung attenuation factor=Activity measured/activity injected 
     Stomach Attenuation The patient was given bread with a known amount of  99m Tc applied to it and a gamma camera picture of the stomach was taken after ingestion. Stomach attenuation was calculated by dividing the activity ingested by activity measured by the gamma camera. Stomach attenuation factor=Activity measured/activity ingested 
     Quantification of deposition Using the computer, regions of interest were visually drawn around the stored equilibrium  133 Xe equilibrium scan to define the lung outline and encompass the lung volume. Central lung regions were then drawn that outlined the inner one third of the two-dimensional lung area. After the xenon regions were defined, the same regions were placed over the deposition image and stomach activity identified. Then, a “stomach region” was visually drawn outlining the stomach. If there was overlap between the stomach region and the xenon equilibrium region of the left lung, the overlapping region was defined as “stomach on lung” or SOL. For determination of whole lung deposition, radioactivity from the stomach and the stomach on lung regions were excluded. 
     Lung deposition was measured using the gamma camera by quantifying activity in the lung regions and applying the appropriate attenuation correction. Oropharyngeal deposition was determined by subtracting the lung activity from the total activity on the deposition image. Appropriate corrections were made for stomach attenuation. 
     Specific Central to Peripheral ratio (sC/P) Specific central to peripheral lung activity was defined by dividing the aerosol image by the xenon equilibrium image. This ratio represents the distribution of deposited aerosol normalized for regional lung volume.
 
sC/P for aerosol deposition=(C/P aerosol/C/P xenon)
 
     If the aerosol behaves perfectly as a gas and follows the  133 Xe distribution, the sC/P ratio should be 1.0. Particles that deposit preferentially in central airways yield sC/P ratios of 2.0 or higher. 
     Results of Deposition study show significant deposition of aerosol throughout the lungs. When normalized for lung volume, there are relatively more particles in central lung regions than peripheral (sC/P ratio=1.618. There is minimal upper airway deposition. 
     Example 2 
     Effects of Aerosol IFN-γ 
     Adverse effects We treated 15 individuals (normal volunteers and patients with pulmonary  tuberculosis ) with aerosolized IFN-γ. The aerosol administration was well tolerated with few patients complaining of occasional cough or myalgias. The longest period of administration was 3 months without an increase in adverse effects. In addition, Jaffe found that aerosolized IFN-γ given to normal subjects was safe, without systemic side effects, and was able to activate alveolar macrophages and not PBMC, as opposed to parenterally delivered r IFN-γ, the effects of which could only be noted in the peripheral blood (Jaffe et al., (1991)  J Clin Invest  88(1): 297-302). 
     Deposition studies We investigated the aerosol deposition characteristsics of IFN-γ. A deposition image is shown and reveals that radioactivity (aerosol) is deposited to all normal areas of the lung. Disease and cavitary areas are spared. Perfusion scan shows minimal perfusion to cavitary areas as well. Preliminary determination of deposition reveals a range of 10-20% of aerosol dose delivered to the lung, using both mass-balance technique and xenon (figure). We concluded that targeted delivery of drug to the lung results in drug deposition in normal lung parenchyma (Condos et al., (1998)  Am J Respir Crit Care Med  157(3): A187). 
     Bronchoalveolar lavage findings We previously demonstrated clinical improvement in a group of patients with severe multi-drug resistant  tuberculosis  treated with IFN-γ. The patients underwent bronchoscopy with BAL of the radiographically involved area before and after treatment. 24-hour cell culture supernatants and fluid from the BAL were assayed by ELISA and were found to have decreasing levels over time of TNF-α (mean 172 to 117 pg/ml), IL1-b (mean 25 to 8 pg/ml) and no appreciable levels of IFN-γ (mean 3.3 to 2.5 pg/ml). We concluded that IFN-γ administration is associated with a decrease in TNF-a produced locally at sites of disease. This may in part explain the beneficial effects of IFN-γ in advanced in advanced MDR-TB (Condos et al., (1998)  Am J Respir Crit Care Med  157(3): A187). 
     Example 3 
     Cytokine Gene Regulation 
     In this study investigation of transcription factor abundance, phosphorylation, and DNA binding activities test the hypothesis that aerosol IFN-γ treatments impinge on cellular signal transduction pathways to activate latent STAT-1 and induce de novo synthesis of IRF-1. We performed these experiments on BAL cells obtained from uninvolved and involved areas of lung in patients with pulmonary  tuberculosis  pre and post treatment with IFN-γ (Condos et al., (1999)  Am J Respir Crit Care Med  (in press)). Purifying and cloning IRF-1 was a principal part of the initial work performed by Richard Pine, Ph.D., in the Laboratory of Molecular Cell Biology at Rockefeller University with James E. Darnell, Jr. (Pine et al., (1990)  Mol Cell Biol  10(6): 2448-57). Immunoblot and electrophoretic mobility shift assays the same as or similar to those proposed for Aim 3 of this project have been employed in the work mentioned here. 
     The results of cytokine gene manipulation in the uninvolved lungs of  tuberculosis  patients is most relevant. Results show that in both the adherent (mainly alveolar macrophages) and the nonadherent (lymphocytes and polymorphonuclear cells) portions of the BAL cells, there is an increase in the amount of specific IRF-DNA and STAT-1-DNA complexes after aerosol IFN-γ treatment. 
     Example 4 
     A randomized clinical trial was performed to look at interferon-gamma immunomodulation in  tuberculosis  (TB) patients. Sputum smear-positive  tuberculosis  patients with bilateral cavitary disease on chest radiographs were randomized to receive standard  tuberculosis  directly observed therapy (DOTS) or DOTS therapy supplemented with interferon gamma three times per week for 16 weeks. Endpoints of the study included relapse rates, symptoms, culture conversion and radiographic resolution of cavitary disease and scarring. Immunnomodulation was investigated by using molecular biology techniques to assess changes in both bronchoalveolar lavage and peripheral blood of treated patients before and after interferon gamma treatment. Interferon-gamma was given either by subcutaneous injection or as an aerosol via nebulizer. 100 patients were randomized. Review of data, in an intention to treat analysis, reveals a significant decrease in fever, sputum volume and wheeze in the gamma treated group. This improvement was earlier and more sustained in the aerosol treated group. In addition, aerosol gamma led to earlier sputum culture conversion at 30 days when compared to standard therapy alone (DOTS) or standard therapy plus interferon gamma by subcutaneous injection. 
     We conducted the randomized control trial at two recruitment sites, one in New York and one in Cape Town, South Africa. 100 patients were enrolled. Sputum smear-positive tuberculosis patients with bilateral cavitary disease on chest radiographs were randomized to receive standard tuberculosis directly observed therapy (DOTS) or DOTS therapy supplemented with interferon gamma three times per week for 16 weeks. For patients randomized to either of the two treatment arms, recombinant interferon gamma (ACTIMMUNE®, InterMune, Inc, Brisbane, Calif.) was delivered 3 times weekly either via the high efficiency AEROECLIPSE® nebuliser (Trudell Medical International, Canada) at a dose of 200 mcg or via subcutaneous injection at the equivalent 200 mcg dose strength. Immunotherapy dosing continued for a 16 week period with strict DOTS adherence monitoring. 
     Of the 100 patients randomized, 20 were excluded for various reasons including negative cultures, withdrawal of consent, lost to follow up, death or concomitant illness such as hepatitis. 80 patients were evaluated clinically. Of the 80 patients evaluated, 29 received nebulized interferon γ supplied by Intermune, Brisbane, Calif. and administered with an AERO ECLIPSE® nebulizer, manufactured by Trudell Medical International, Canada. 28 patients received standard therapy (DOTS), and 23 received subcutaneous interferon γ supplied by Intermune, Brisbane, Calif. Endpoints of the study included relapse rates, symptoms, culture conversion and radiographic resolution of cavitary disease and scarring. Immunnomodulation was investigated by using molecular biology techniques to assess changes in both bronchoalveolar lavage and peripheral blood of treated patients before and after interferon gamma treatment. 
     Patients were asked at weekly intervals whether they had experienced fever in the past week, whether they had experienced a reduction in sputum production over baseline, and whether they had experienced a reduction in wheezing over baseline. Further, cultures were taken of the sputum to determine whether the cultures were still positive for  tuberculosis  pathogens. Review of data, in an intention to treat analysis, reveals a significant decrease in fever, sputum volume and wheeze in the treated group. This improvement was earlier and more sustained in the aerosol treated group. In addition, aerosol gamma led to earlier sputum culture conversion at 30 days when compared to standard therapy alone (DOTS) or standard therapy plus interferon gamma by subcutaneous injection. 
       FIG. 6  represents graphically that over a sixteen week period of time, there was a reduction in fever among patients in all of the three treatment groups. However, the difference was most pronounced in the group treated with standard therapy supplemented by nebulized interferon-γ.  FIG. 7  demonstrates graphically that over a sixteen week period of time, there was a reduction in sputum production among patients in all of the three treatment groups. However, the difference more pronounced in the group treated with standard therapy supplemented by nebulized interferon-γ than in the group treated with standard therapy alone.  FIG. 8  demonstrates graphically that over a sixteen week period of time, there was a reduction in wheezing in all of the three treatment groups. However, the difference was more pronounced in the group treated with standard therapy supplemented by nebulized interferon-γ than in the group treated with standard therapy alone.  FIG. 9  demonstrates graphically that over a sixteen week period of time, there was an increase in conversion of sputum cultures to negative for  tuberculosis  pathogens in all of the three treatment groups. However, the difference was more pronounced in the group treated with standard therapy supplemented by nebulized interferon-γ than in the group treated with standard therapy alone. 
       FIG. 10  represents graphically that over a sixteen week period of time, there was a reduction in reported patients having a poor appetite in patients receiving nebulized interferon-γ therapy and standard therapy. However, the reduction in poor appetite was most pronounced in the group treated with standard therapy supplemented by nebulized interferon-γ. Likewise,  FIG. 11  represents graphically that over a sixteen week period of time, there was a reduction in reported patients experiencing night sweats in patients receiving nebulized interferon-γ therapy and standard therapy. However, the reduction in night sweats was most pronounced in the group treated with standard therapy supplemented by nebulized interferon-γ. Further,  FIG. 12  represents graphically that over a sixteen week period of time, there was a reduction in patients reporting tiredness both in patients receiving nebulized interferon-γ therapy and standard therapy. However, the reduction in tiredness was most pronounced in the group treated with standard therapy supplemented by nebulized interferon-γ. 
     Example 5 
     Materials and Methods. Patients with pulmonary  tuberculosis  were recruited from April 2005 to December 2006 in the Division of Pulmonology at the University of Cape Town with the following inclusion criteria: sputum smear positive for acid fast mycobacteria and culture positive for  Mycobacterium tuberculosis  sensitive to at least ¾ first-line drugs, bilateral cavitary  tuberculosis  on chest radiograph, and if HIV-1+, CD4+&gt;200 cells/μL or CD4:CD8 ratio&gt;0.3:1, and not on anti-retroviral therapy. Exclusion criteria included extrapulmonary  tuberculosis , AIDS-defining opportunistic infection, or history of severe bronchospasm. We randomized 96 patients who met the entrance criteria. Four of these individuals grew Mtb (BACTEC method) resistant to both isoniazid and rifampin and were thus ineligible due to MDR-TB, two patients had negative cultures for Mtb, and one patient received a streptomycin-containing regimen. All of the remaining 89 patients had Mtb cultured from their sputum and were drug-sensitive. Respiratory and systemic symptoms were reviewed at baseline and weekly during treatment. IRB approval was obtained at NYU School of Medicine and the University of Cape Town. IFN-γ1b was nebulized with an AeroEclipse breath-activated nebulizer, or was administered subcutaneously. 
     Bronchoalveolar lavage was performed at baseline and 4 months. Briefly, after local anesthesia with lidocaine, the bronchoscope was inserted via the nasal passage to the lower respiratory tract and a 300-ml lavage was performed using 5, 20-ml aliquots of normal saline in each of three involved lung segments. The recovered fluid was filtered over sterile gauze, the volume recovered measured and a total cell count performed. A cytospin slide was stained with Diff-Quik and 500 cells counted to determine the cell differential. BAL supernatants were collected in RPMI over 24 hours at 10 6  BAL cells/ml. Cytokines IL-1β, IL-6, IL-8, and IL-10 were measured by Luminex Beadlyte ELISA assay. Peripheral blood was obtained at time 0, 1 month, and 4 months for in vitro stimulation. An in vitro Stimulation Index evaluated peripheral CD4+ cell response to PPD stimulation over 5 days. 
     Prior to entry into the study,  tuberculosis  patients had a posterior-anterior and lateral chest x-ray to evaluate for the presence of cavities. At randomization and 4 months, each participant had a chest CT-scan at the Groote Schuur Hospital using a Somatom Balance apparatus (Siemens Medical, Ehrlangen, Germany) and a single breathhold technique. The collimator was set at 3 mm standard cuts from the superior margin of the clavicles to the adrenal glands. The standard reconstruction algorithm was used for soft tissue and high frequency filter for the lung. The internal volume of each cavity was assessed using internal cross-sectional diameters. 
     The analysis, which included all 89 randomized and eligible subjects, was performed according to the intention-to-treat principle. Summary statistics (mean, median, standard deviation, and frequency distribution) were generated for baseline demographics and clinical presentations to characterize the study population. To compare the baseline characteristics between 3 treatment groups, ANOVA was used for continuous variables, and Chi-square or Fisher&#39;s exact test, for categorical variables. The primary endpoint of the study was the time to smear conversion and culture conversion. Kaplan Meier curves were generated for the time to smear conversion by treatment groups. The Chi-square test was used to compare the percentage of subjects who had smear conversion before 4 weeks between treatment groups. To assure the quality of data, 6 subjects with zero or only one follow-up sputum smear sample were excluded from the analysis. The analysis of culture conversion was done in the same way. For the change of symptom at 4 weeks, we averaged the results from the 3rd, 4th and 5th week data for each subject, and used ANOVA and two sample t-test for 3 groups and two groups comparison, respectively. For the analysis of cell differentials in BAL, functional assays, and cavity sizes, paired t-test or Wilcoxon signed rank test was used to compare baseline and 16 weeks values in each treatment group, and ANOVA or Kruskal-Wallis test was used to compare the change from baseline to 16 weeks between treatment groups, as appropriate. All tests were two sided and p-values less than 5% were considered statistically significant. All analyses were conducted using SAS software. 
     Results. 96 patients were randomized, and 89 were eligible for the study. 12 patients did not complete the trial including 4 patients who were lost to follow-up, 2 who withdrew consent, and 6 who were withdrawn due to serious adverse events (SAE&#39;s) including 1 diabetic ketoacidosis, 2 hepatitis, 1 community acquired pneumonia, 1 hypoxia, and 1 died in a motor vehicle accident at 16 weeks. The SAE&#39;s were not thought to be treatment-related based on Data Safety Management Board review, although the hypoxia in the patient with emphysema occurred during bronchoscopy, and the procedure was terminated. They had been randomized to control DOTS, nebulized IFN-γ1b, and subcutaneous IFN-γ1b. 
     The mean age of the  tuberculosis  patients who were eligible for the study ranged from 32-35 years and did not differ among groups (Table 1). The 3 groups were closely matched for gender (63% to 81% male), and race (56-63% mixed) and symptoms. Eighty percent had a history of smoking. There were 6 patients who were co-infected with HIV-1 and their mean CD4+ was 253 cells/μL. At baseline, the three groups were comparable in respiratory and constitutional symptoms (Table 1). 
     
       
         
           
               
             
               
                 TABLE 1 
               
             
            
               
                   
               
               
                 Baseline Table for Demographic Characteristics for the Three Arms. 
               
            
           
           
               
               
               
               
               
            
               
                   
                   
                 NEBULIZED- 
                 SUBCUTANEOUS- 
                   
               
               
                   
                 DOTS 
                 IFN-γ 
                 IFN-γ 
                 p-value 
               
               
                   
               
               
                 N 
                 30 
                 32 
                 27 
                   
               
               
                 Age 
                 32 +/− 11 
                 34 +/− 10 
                 35 +/− 13 
                 0.55 
               
               
                 Gender 
                   
                   
                   
                   
               
               
                 Female 
                 37% 
                 25% 
                 19% 
                 0.29 
               
               
                 Male 
                 63% 
                 75% 
                 81% 
                   
               
               
                 Race 
                   
                   
                   
                   
               
               
                 Black 
                 37% 
                 41% 
                 37% 
                 0.73 
               
               
                 More than one 
                 63% 
                 56% 
                 63% 
                   
               
               
                 Asian/white 
                  0% 
                  3% 
                  0% 
                   
               
               
                 Cough 
                 96% 
                 100% 
                 100%  
                 0.64 
               
               
                 Dyspnea = 
                 93% 
                 94% 
                 92% 
                 0.83 
               
               
                 (2, 3) 
                   
                   
                   
                   
               
               
                 Fever 
                 46% 
                 35% 
                 42% 
                 0.69 
               
               
                 Poor 
                 29% 
                 45% 
                 50% 
                 0.24 
               
               
                 Appetite 
                   
                   
                   
                   
               
               
                 Wheeze 
                 68% 
                 58% 
                 54% 
                 0.55 
               
               
                 Weakness 
                 50% 
                 65% 
                 62% 
                 0.50 
               
               
                 Tiredness 
                 86% 
                 77% 
                 92% 
                 0.29 
               
               
                 Night sweats 
                 3.8 +/− 2.7 
                 3.0 +/− 2.7 
                 3.2 +/− 3.1 
                 0.54 
               
               
                 Sputum Vol 
                 29% 
                 16% 
                 12% 
                 0.25 
               
               
                 &lt;10 ml 
                   
                   
                   
                   
               
               
                 Weight 
                 54 +/− 9  
                 56 +/− 10 
                 55 +/− 7  
                 0.71 
               
               
                 Culture 
                 96% 
                 91% 
                 83% 
                 0.31 
               
               
                 Positive 
                   
                   
                   
                   
               
               
                 HIV-1+ 
                  2 
                  2 
                  2 
               
               
                   
               
            
           
         
       
     
     At 4 weeks, there was a significantly higher smear conversion rate in the nebulized recombinant interferon-γ1b group compared to the other two treatment groups combined (60% versus 36%, p&lt;0.05,  FIG. 13 ). A trend towards higher culture conversion rate at 4 weeks was also observed in the nebulized group compared to the other two treatment groups (32% vs 18%, NS). There was a significant reduction in fever in the IFN-γ1b groups compared to control DOTS at 4 and 8 weeks ( FIG. 14A , p&lt;0.05). There also was a significant reduction in complaints of night sweats at 4 weeks in the IFN-γ1b groups ( FIG. 14B , p&lt;0.05). Also, there was a significant reduction in the proportion with wheeze in the IFN-γ1b groups at 4, 8, and 12 weeks ( FIG. 14C , p&lt;0.05). In addition, at 12 weeks there was a significant reduction in cough in the groups receiving IFN-γ1b. There was no statistically significant difference between treatment arms in the incidence of tiredness, poor appetite, sputum volume, or dyspnea. 
     There was a significant increase in median percent lymphocytes from baseline to 16 weeks in two of three groups in BAL (Table 2; DOTS 4% to 15%; IFN-γ1b-SC 6% to 22%; IFN-γ1b-NEB 5% to 15%, p&lt;0.01 for DOTS and IFN-γ1b-SC). There was no change in lymphocytes/ml BALF recovered. There was a significant decrease in median percent neutrophils from baseline to 16 weeks in all three groups in BAL (Table 2; DOTS 28% to 11%; IFN-γ1b-SC 30% to 2%; IFN-γ1b-NEB 24% to 4%), and a remarkable decline in neutrophils/ml BALF recovered in all 3 groups (DOTS 3.98 to 0.30×10 4 ; IFN-γ1b-SC 3.59 to 0.23×10 4 ; IFN-γ1b-NEB 2.10 to 0.26×10 4 ). The percentage of macrophages increased slightly over the 16 weeks in all 3 groups. However, the macrophages/ml decreased 2-fold in all three groups (Table 2). 
     
       
         
           
               
             
               
                 TABLE 2 
               
             
            
               
                   
               
               
                 Bronchoalveolar Lavage Results 
               
            
           
           
               
               
               
               
            
               
                   
                 DOTS 
                 NEBULIZED-IFN-γ 
                 SUBCUTANEOUS-IFN-γ 
               
            
           
           
               
               
               
               
               
               
               
               
               
               
            
               
                   
                 Lympho- 
                 Macro- 
                 Neutro- 
                 Lympho- 
                 Macro- 
                 Neutro- 
                 Lympho- 
                 Macro- 
                 Neutro- 
               
            
           
           
               
               
               
               
               
               
               
               
               
               
               
            
               
                   
                 Week 
                 cytes 
                 phages 
                 phils 
                 cytes 
                 phages 
                 phils 
                 cytes 
                 phages 
                 phils 
               
               
                   
               
            
           
           
               
               
               
               
               
               
               
               
               
               
               
            
               
                 % 
                 Week 0 
                 4 
                 60 
                 28 
                 5 
                 60 
                 24 
                 6 
                 62 
                 30 
               
               
                   
                   
                 (2, 8) 
                 (17, 84) 
                 (10, 82) 
                 (3, 15) 
                 (32, 80) 
                 (5, 56) 
                 (3, 10) 
                 (43, 83) 
                 (4, 54) 
               
               
                   
                 Week 16 
                 15 
                 64 
                 11 
                 15 
                 63 
                 4 
                 22 
                 66 
                 2 
               
               
                   
                   
                 (6, 25) 
                 (44, 72) 
                 (3, 31) 
                 (8, 34) 
                 (40, 84) 
                 (2, 16) 
                 (13, 33) 
                 (54, 77) 
                 (2, 9) 
               
               
                   
                 p-value 
                 &lt;0.01 
                 0.13 
                 0.01 
                 0.11 
                 0.42 
                 0.05 
                 &lt;0.01 
                 0.94 
                 0.02 
               
               
                 Cells/ml 
                 Week 0 
                 0.75 
                 7.80 
                 3.98 
                 0.84 
                 7.43 
                 2.10 
                 0.56 
                 7.26 
                 3.59 
               
               
                 (10e4) 
                   
                 (0.26, 1.50) 
                 (2.58, 12.75) 
                 (0.96, 20.7) 
                 (0.30, 2.17) 
                 (4.80, 10.64) 
                 (0.67, 11.20) 
                 (0.29, 1.86) 
                 (3.47, 17.76) 
                 (0.60, 13.60) 
               
               
                   
                 Week 16 
                 0.63 
                 2.60 
                 0.30 
                 0.80 
                 3.64 
                 0.26 
                 1.32 
                 3.63 
                 0.23 
               
               
                   
                   
                 (0.40, 1.20) 
                 (1.98, 4.68) 
                 (0.12, 2.00) 
                 (0.52, 1.60) 
                 (1.98, 7.20) 
                 (0.14, 0.82) 
                 (0.58, 3.22) 
                 (1.90, 6.50) 
                 (0.08, 0.52) 
               
               
                   
                 p-value 
                 0.90 
                 0.09 
                 &lt;0.01 
                 0.68 
                 0.46 
                 0.04 
                 0.09 
                 &lt;0.01 
                 &lt;0.01 
               
               
                   
               
               
                 * median 
               
            
           
         
       
     
     There was a significant decline in inflammatory cytokines in 24 hour BAL supernatants in the nebulized IFN-γ1b group alone from baseline to week 16: IL-1β (p&lt;0.001), IL-6 (p=0.04), IL-8 (p=0.02), and IL-10 (p=0.02) ( FIG. 15 ). PBMCs collected at one month showed a significant increase in CD4+ proliferative response to PPD (DOTS alone 3.7±2.6, IFN-γ1b-SC 9.3±11.4, IFN-γ1b-NEB 9.1±7.4, p&lt;0.01) suggesting a systemic response to both modes of administration. Proliferative responses by PBMC from all 3 groups to  Staphylococcus aureus  enterotoxin was 66-73-fold and mumps was 0.8 to 1.9 (NS for both tests). 
     There was a striking improvement in cavity size as assessed by HRCT in all 3 groups between baseline and 16 weeks; however, the IFN-γ1b groups did not differ from DOTS alone (Cavity in mm: DOTS 34+/−11 to 20+/−16; IFN-γ1b-SC 39+/−24 to 29+/−24; IFN-γ1b-NEB 34+/−13 to 18+/−17. 
     Discussion. Treatment of drug-sensitive pulmonary  tuberculosis  with nebulized IFN-γ1b as an adjunct cleared  M. tuberculosis  from the sputum and resolved the classic symptoms of fever, night sweats, wheeze, cough and malaise more rapidly than treatment with either DOTS or DOTS plus subcutaneous IFN-γ1b. This finding suggests that nebulized IFN-γ1b reduces transmission of  tuberculosis  due to more rapid clearance of  M. tuberculosis  during the first 4 weeks. Additionally, nebulized IFN-γ1b plus DOTS significantly reduced lung inflammatory cytokines in BAL supernatants at the 16 week time point. There was a recruitment of lymphocytes and reduction in the neutrophil inflammation in the lung in all three groups, which manifested clinically as a dramatic resolution of the macrophage-neutrophilic alveolitis in the lower respiratory tract. Concomitantly with the increase in BAL lymphocytes, blood CD4+ cells doubled in their proliferative capacity to PPD stimulation at the 4 week time point. All treatment groups experienced radiographic improvement with resolution of cavities by 16 weeks. 
     In summary, the addition of nebulized interferon-γ1b to DOTS in a randomized, controlled clinical trial resulted in more rapid clearance of Mtb from the sputum, improved symptoms, and reduced inflammatory macrophage-neutrophil alveolitis. These findings suggest that nebulized interferon-γ1b may have a role in the therapeutic management of patients with cavitary  tuberculosis . Further studies are required to confirm these findings and determine the optimal dose and frequency of administration.